Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:38:35 (17499): wrapper (7.7.26015): starting
10:38:35 (17499): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 10:38:35] Arguments: --nthreads 8
[2025-05-17 10:38:35] Threads: 8
[2025-05-17 10:38:35] Checking for CVMFS
[2025-05-17 10:38:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 10:38:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 10:38:36] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 10:38:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 10:38:37] 2.11.2.0 19741 7046 89024 146094 0 154 16924776 25165825 4647 130560 0 5706377 99.770 7159929 1178 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-17 10:38:37] CVMFS is ok
[2025-05-17 10:38:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 10:38:37] Checking for apptainer binary...
[2025-05-17 10:38:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 10:38:37] Running /usr/bin/apptainer --version
[2025-05-17 10:38:37] apptainer version 1.3.2-1.el7
[2025-05-17 10:38:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 11:09:02] cg-vwn339.simple-grid.lan
[2025-05-17 11:09:02] apptainer works
[2025-05-17 11:09:02] Set ATHENA_PROC_NUMBER=8
[2025-05-17 11:09:02] Set ATHENA_CORE_NUMBER=8
[2025-05-17 11:09:02] Starting ATLAS job with PandaID=6651911525
[2025-05-17 11:09:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/33 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 16:47:43]  *** The last 200 lines of the pilot log: ***
[2025-05-17 16:47:43] 2025-05-17 14:24:56,213 | INFO     | mean y: 2426734.429054054
[2025-05-17 16:47:43] 2025-05-17 14:24:56,213 | INFO     | -- intersect: -38987553311.066475
[2025-05-17 16:47:43] 2025-05-17 14:24:56,213 | INFO     | intersect: -38987553311.066475
[2025-05-17 16:47:43] 2025-05-17 14:24:56,213 | INFO     | chi2: 9.314054046683474
[2025-05-17 16:47:43] 2025-05-17 14:24:56,214 | INFO     | sum of square deviations: 7641036290.0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,217 | INFO     | sum of deviations: 196798211285.0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,217 | INFO     | mean x: 1747482590.0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,217 | INFO     | mean y: 2433238.182130584
[2025-05-17 16:47:43] 2025-05-17 14:24:56,217 | INFO     | -- intersect: -45004740515.690865
[2025-05-17 16:47:43] 2025-05-17 14:24:56,217 | INFO     | intersect: -45004740515.690865
[2025-05-17 16:47:43] 2025-05-17 14:24:56,218 | INFO     | chi2: 8.529075174404941
[2025-05-17 16:47:43] 2025-05-17 14:24:56,218 | INFO     | current chi2=8.529075174404941 (change=8.427896900147859 %)
[2025-05-17 16:47:43] 2025-05-17 14:24:56,218 | INFO     | right removable region: 290
[2025-05-17 16:47:43] 2025-05-17 14:24:56,218 | INFO     | sum of square deviations: 7641036290.0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,221 | INFO     | sum of deviations: 81383273220.00003
[2025-05-17 16:47:43] 2025-05-17 14:24:56,221 | INFO     | mean x: 1747482895.0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,221 | INFO     | mean y: 2464022.3367697597
[2025-05-17 16:47:43] 2025-05-17 14:24:56,221 | INFO     | -- intersect: -18609655131.86524
[2025-05-17 16:47:43] 2025-05-17 14:24:56,222 | INFO     | intersect: -18609655131.86524
[2025-05-17 16:47:43] 2025-05-17 14:24:56,222 | INFO     | chi2: 4.74355052822089
[2025-05-17 16:47:43] 2025-05-17 14:24:56,222 | INFO     | current chi2=4.74355052822089 (change=49.07104356013521 %)
[2025-05-17 16:47:43] 2025-05-17 14:24:56,223 | INFO     | sum of square deviations: 7253894147.5
[2025-05-17 16:47:43] 2025-05-17 14:24:56,225 | INFO     | sum of deviations: 14789314092.000023
[2025-05-17 16:47:43] 2025-05-17 14:24:56,225 | INFO     | mean x: 1747483047.5
[2025-05-17 16:47:43] 2025-05-17 14:24:56,226 | INFO     | mean y: 2490220.076923077
[2025-05-17 16:47:43] 2025-05-17 14:24:56,226 | INFO     | -- intersect: -3560296213.5836596
[2025-05-17 16:47:43] 2025-05-17 14:24:56,226 | INFO     | intersect: -3560296213.5836596
[2025-05-17 16:47:43] 2025-05-17 14:24:56,226 | INFO     | chi2: 2.7067155746477516
[2025-05-17 16:47:43] 2025-05-17 14:24:56,227 | INFO     | current chi2=2.7067155746477516 (change=42.93903778309854 %)
[2025-05-17 16:47:43] 2025-05-17 14:24:56,227 | INFO     | sum of square deviations: 6880054580.0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,230 | INFO     | sum of deviations: -38662401947.99999
[2025-05-17 16:47:43] 2025-05-17 14:24:56,230 | INFO     | mean x: 1747483200.0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,230 | INFO     | mean y: 2512025.252669039
[2025-05-17 16:47:43] 2025-05-17 14:24:56,230 | INFO     | -- intersect: 9822477417.994837
[2025-05-17 16:47:43] 2025-05-17 14:24:56,230 | INFO     | intersect: 9822477417.994837
[2025-05-17 16:47:43] 2025-05-17 14:24:56,231 | INFO     | chi2: 1.420369241466893
[2025-05-17 16:47:43] 2025-05-17 14:24:56,231 | INFO     | current chi2=1.420369241466893 (change=47.524252094653946 %)
[2025-05-17 16:47:43] 2025-05-17 14:24:56,231 | INFO     | sum of square deviations: 6519285025.0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,233 | INFO     | sum of deviations: -59774585640.0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,234 | INFO     | mean x: 1747483352.5
[2025-05-17 16:47:43] 2025-05-17 14:24:56,234 | INFO     | mean y: 2520883.6231884058
[2025-05-17 16:47:43] 2025-05-17 14:24:56,234 | INFO     | -- intersect: 16024997720.872002
[2025-05-17 16:47:43] 2025-05-17 14:24:56,234 | INFO     | intersect: 16024997720.872002
[2025-05-17 16:47:43] 2025-05-17 14:24:56,234 | INFO     | chi2: 1.0735363350615423
[2025-05-17 16:47:43] 2025-05-17 14:24:56,235 | INFO     | current chi2=1.0735363350615423 (change=24.418503039896674 %)
[2025-05-17 16:47:43] 2025-05-17 14:24:56,235 | INFO     | left removable region: 40
[2025-05-17 16:47:43] 2025-05-17 14:24:56,235 | INFO     | sum of square deviations: 4844974562.5
[2025-05-17 16:47:43] 2025-05-17 14:24:56,237 | INFO     | sum of deviations: -6500797389.000003
[2025-05-17 16:47:43] 2025-05-17 14:24:56,237 | INFO     | mean x: 1747483779.5
[2025-05-17 16:47:43] 2025-05-17 14:24:56,237 | INFO     | mean y: 2513480.128
[2025-05-17 16:47:43] 2025-05-17 14:24:56,237 | INFO     | -- intersect: 2347218874.253267
[2025-05-17 16:47:43] 2025-05-17 14:24:56,238 | INFO     | intersect: 2347218874.253267
[2025-05-17 16:47:43] 2025-05-17 14:24:56,238 | INFO     | chi2: 0.09294625948192617
[2025-05-17 16:47:43] 2025-05-17 14:24:56,238 | INFO     | -- intersect: 2347218874.253267
[2025-05-17 16:47:43] 2025-05-17 14:24:56,238 | INFO     | current memory leak: -1.34 B/s (using 250 data points, chi2=0.09)
[2025-05-17 16:47:43] 2025-05-17 14:24:56,239 | INFO     | ..............................
[2025-05-17 16:47:43] 2025-05-17 14:24:56,239 | INFO     | . Timing measurements:
[2025-05-17 16:47:43] 2025-05-17 14:24:56,240 | INFO     | . get job = 0 s
[2025-05-17 16:47:43] 2025-05-17 14:24:56,240 | INFO     | . initial setup = 9 s
[2025-05-17 16:47:43] 2025-05-17 14:24:56,242 | INFO     | . payload setup = 123 s
[2025-05-17 16:47:43] 2025-05-17 14:24:56,242 | INFO     | . stage-in = 0 s
[2025-05-17 16:47:43] 2025-05-17 14:24:56,242 | INFO     | . payload execution = 18346 s
[2025-05-17 16:47:43] 2025-05-17 14:24:56,242 | INFO     | . stage-out = 4 s
[2025-05-17 16:47:43] 2025-05-17 14:24:56,242 | INFO     | . log creation = 1 s
[2025-05-17 16:47:43] 2025-05-17 14:24:56,242 | INFO     | ..............................
[2025-05-17 16:47:43] 2025-05-17 14:24:56,593 | INFO     | 
[2025-05-17 16:47:43] 2025-05-17 14:24:56,593 | INFO     | job summary report
[2025-05-17 16:47:43] 2025-05-17 14:24:56,593 | INFO     | --------------------------------------------------
[2025-05-17 16:47:43] 2025-05-17 14:24:56,593 | INFO     | PanDA job id: 6651911525
[2025-05-17 16:47:43] 2025-05-17 14:24:56,593 | INFO     | task id: 44638099
[2025-05-17 16:47:43] 2025-05-17 14:24:56,594 | INFO     | errors: (none)
[2025-05-17 16:47:43] 2025-05-17 14:24:56,594 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 16:47:43] 2025-05-17 14:24:56,594 | INFO     | pilot state: finished 
[2025-05-17 16:47:43] 2025-05-17 14:24:56,594 | INFO     | transexitcode: 0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,594 | INFO     | exeerrorcode: 0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,594 | INFO     | exeerrordiag: 
[2025-05-17 16:47:43] 2025-05-17 14:24:56,594 | INFO     | exitcode: 0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,594 | INFO     | exitmsg: OK
[2025-05-17 16:47:43] 2025-05-17 14:24:56,594 | INFO     | cpuconsumptiontime: 66038 s
[2025-05-17 16:47:43] 2025-05-17 14:24:56,594 | INFO     | nevents: 400
[2025-05-17 16:47:43] 2025-05-17 14:24:56,595 | INFO     | neventsw: 0
[2025-05-17 16:47:43] 2025-05-17 14:24:56,595 | INFO     | pid: 15918
[2025-05-17 16:47:43] 2025-05-17 14:24:56,595 | INFO     | pgrp: 15918
[2025-05-17 16:47:43] 2025-05-17 14:24:56,595 | INFO     | corecount: 8
[2025-05-17 16:47:43] 2025-05-17 14:24:56,595 | INFO     | event service: False
[2025-05-17 16:47:43] 2025-05-17 14:24:56,595 | INFO     | sizes: {0: 2393484, 1: 2393739, 2: 2393739, 12: 2393767, 23: 2393795, 34: 2393823, 44: 2393979, 55: 2394007, 66: 2394035, 77: 2394063, 87: 2394119, 89: 2394633, 98
[2025-05-17 16:47:43] 2025-05-17 14:24:56,595 | INFO     | --------------------------------------------------
[2025-05-17 16:47:43] 2025-05-17 14:24:56,595 | INFO     | 
[2025-05-17 16:47:43] 2025-05-17 14:24:56,595 | INFO     | executing command: ls -lF /var/lib/boinc/slots/33
[2025-05-17 16:47:43] 2025-05-17 14:24:57,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,036 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,036 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 16:47:43] 2025-05-17 14:24:57,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 16:47:43] 2025-05-17 14:24:57,038 | INFO     | job 6651911525 has completed (purged errors)
[2025-05-17 16:47:43] 2025-05-17 14:24:57,038 | INFO     | overall cleanup function is called
[2025-05-17 16:47:43] 2025-05-17 14:24:58,047 | INFO     | --- collectZombieJob: --- 10, [15918]
[2025-05-17 16:47:43] 2025-05-17 14:24:58,047 | INFO     | zombie collector waiting for pid 15918
[2025-05-17 16:47:43] 2025-05-17 14:24:58,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 16:47:43] 2025-05-17 14:24:58,047 | INFO     | collected zombie processes
[2025-05-17 16:47:43] 2025-05-17 14:24:58,047 | INFO     | will attempt to kill all subprocesses of pid=15918
[2025-05-17 16:47:43] 2025-05-17 14:24:58,177 | INFO     | process IDs to be killed: [15918] (in reverse order)
[2025-05-17 16:47:43] 2025-05-17 14:24:58,683 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 16:47:43] 2025-05-17 14:24:58,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 16:47:43] 2025-05-17 14:24:58,687 | INFO     | did not find any defunct processes belonging to 15918
[2025-05-17 16:47:43] 2025-05-17 14:24:58,690 | INFO     | did not find any defunct processes belonging to 15918
[2025-05-17 16:47:43] 2025-05-17 14:24:58,690 | INFO     | ready for new job
[2025-05-17 16:47:43] 2025-05-17 14:24:58,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 16:47:43] 2025-05-17 14:24:58,693 | INFO     | **************************************
[2025-05-17 16:47:43] 2025-05-17 14:24:58,693 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 16:47:43] 2025-05-17 14:24:58,693 | INFO     | **************************************
[2025-05-17 16:47:43] 2025-05-17 14:24:58,693 | INFO     | 
[2025-05-17 16:47:43] 2025-05-17 14:24:58,694 | INFO     | pilot is running in a VM
[2025-05-17 16:47:43] 2025-05-17 14:24:58,694 | INFO     | architecture information:
[2025-05-17 16:47:43] 2025-05-17 14:24:58,710 | INFO     | executing command: cat /etc/os-release
[2025-05-17 16:47:43] 2025-05-17 14:24:58,857 | INFO     | cat /etc/os-release:
[2025-05-17 16:47:43] NAME="CentOS Linux"
[2025-05-17 16:47:43] VERSION="7 (Core)"
[2025-05-17 16:47:43] ID="centos"
[2025-05-17 16:47:43] ID_LIKE="rhel fedora"
[2025-05-17 16:47:43] VERSION_ID="7"
[2025-05-17 16:47:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 16:47:43] ANSI_COLOR="0;31"
[2025-05-17 16:47:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 16:47:43] HOME_URL="https://www.centos.org/"
[2025-05-17 16:47:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 16:47:43] 
[2025-05-17 16:47:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 16:47:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 16:47:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 16:47:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 16:47:43] 
[2025-05-17 16:47:43] 2025-05-17 14:24:58,858 | INFO     | **************************************
[2025-05-17 16:47:43] 2025-05-17 14:24:59,361 | INFO     | executing command: df -mP /var/lib/boinc/slots/33
[2025-05-17 16:47:43] 2025-05-17 14:24:59,504 | INFO     | sufficient remaining disk space (496566796288 B)
[2025-05-17 16:47:43] 2025-05-17 14:24:59,504 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 16:47:43] 2025-05-17 14:24:59,504 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 16:47:43] 2025-05-17 14:24:59,504 | INFO     | update_server=False
[2025-05-17 16:47:43] 2025-05-17 14:24:59,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 16:47:43] 2025-05-17 14:24:59,634 | INFO     | all data control threads have been joined
[2025-05-17 16:47:43] 2025-05-17 14:24:59,676 | INFO     | PID=6362 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-17 16:47:43] 2025-05-17 14:24:59,676 | INFO     | .. there are 9 such processes running
[2025-05-17 16:47:43] 2025-05-17 14:24:59,676 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 16:47:43] 2025-05-17 14:24:59,676 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 16:47:43] 2025-05-17 14:24:59,676 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 16:47:43] 2025-05-17 14:24:59,710 | INFO     | all job control threads have been joined
[2025-05-17 16:47:43] 2025-05-17 14:25:00,007 | INFO     | all payload control threads have been joined
[2025-05-17 16:47:43] 2025-05-17 14:25:00,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 16:47:43] 2025-05-17 14:25:00,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:47:43] 2025-05-17 14:25:00,410 | INFO     | aborting loop
[2025-05-17 16:47:43] 2025-05-17 14:25:00,510 | INFO     | [job] retrieve thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:00,640 | INFO     | [data] control thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:00,675 | INFO     | [payload] validate_post thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:00,716 | INFO     | [job] control thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:01,013 | INFO     | [payload] control thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:01,149 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:01,207 | INFO     | [job] validate thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:01,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:01,269 | INFO     | [payload] failed_post thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:01,382 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:47:43] 2025-05-17 14:25:01,416 | INFO     | [job] job monitor thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:01,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 16:47:43] 2025-05-17 14:25:01,635 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:01,792 | INFO     | [data] copytool_in thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:01,899 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:02,079 | INFO     | [data] copytool_out thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:02,388 | INFO     | [job] queue monitor thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:05,498 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 16:47:43] 2025-05-17 14:25:05,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760040920896)>', '<ExcThread(monitor, started 139759301158656)>']
[2025-05-17 16:47:43] 2025-05-17 14:25:05,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 16:47:43] 2025-05-17 14:25:05,712 | INFO     | [monitor] control thread has ended
[2025-05-17 16:47:43] 2025-05-17 14:25:10,695 | INFO     | all workflow threads have been joined
[2025-05-17 16:47:43] 2025-05-17 14:25:10,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 16:47:43] 2025-05-17 14:25:10,695 | INFO     | traces error code: 0
[2025-05-17 16:47:43] 2025-05-17 14:25:10,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 16:47:43] 2025-05-17 14:25:10,983 [wrapper] ==== pilot stdout END ====
[2025-05-17 16:47:43] 2025-05-17 14:25:11,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 16:47:43] 2025-05-17 14:25:11,171 [wrapper] pilotpid: 6362
[2025-05-17 16:47:43] 2025-05-17 14:25:11,235 [wrapper] Pilot exit status: 0
[2025-05-17 16:47:43] 2025-05-17 14:25:11,583 [wrapper] pandaids: 6651911525
[2025-05-17 16:47:43] 2025-05-17 14:25:12,378 [wrapper] cleanup supervisor_pilot 22442 6363
[2025-05-17 16:47:43] 2025-05-17 14:25:12,419 [wrapper] Test setup, not cleaning
[2025-05-17 16:47:43] 2025-05-17 14:25:12,475 [wrapper] apfmon messages muted
[2025-05-17 16:47:43] 2025-05-17 14:25:12,549 [wrapper] ==== wrapper stdout END ====
[2025-05-17 16:47:43] 2025-05-17 14:25:12,596 [wrapper] ==== wrapper stderr END ====
[2025-05-17 16:47:43]  *** Error codes and diagnostics ***
[2025-05-17 16:47:43]     "exeErrorCode": 0,
[2025-05-17 16:47:43]     "exeErrorDiag": "",
[2025-05-17 16:47:43]     "pilotErrorCode": 0,
[2025-05-17 16:47:43]     "pilotErrorDiag": "",
[2025-05-17 16:47:43]  *** Listing of results directory ***
[2025-05-17 16:47:43] total 410844
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc    495897 May 16 19:30 pilot3.tar.gz
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc      5111 May 16 20:10 queuedata.json
[2025-05-17 16:47:43] -rwx------. 1 boinc boinc     37140 May 16 20:11 runpilot2-wrapper.sh
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc       100 May 17 10:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 16:47:43] -rwxr-xr-x. 1 boinc boinc      7986 May 17 10:38 run_atlas
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc       105 May 17 10:38 job.xml
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc      6371 May 17 10:38 init_data.xml
[2025-05-17 16:47:43] -rw-r--r--. 2 boinc boinc 220436011 May 17 10:38 EVNT.44638096._001027.pool.root.1
[2025-05-17 16:47:43] -rw-r--r--. 2 boinc boinc     17569 May 17 10:38 start_atlas.sh
[2025-05-17 16:47:43] drwxrwx--x. 2 boinc boinc        68 May 17 10:38 shared
[2025-05-17 16:47:43] -rw-r--r--. 2 boinc boinc    508875 May 17 10:38 input.tar.gz
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc         0 May 17 10:38 boinc_lockfile
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc      2538 May 17 11:09 pandaJob.out
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc       424 May 17 11:09 setup.sh.local
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc    994635 May 17 11:12 agis_schedconf.cvmfs.json
[2025-05-17 16:47:43] drwx------. 4 boinc boinc      4096 May 17 11:12 pilot3
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc 192400092 May 17 16:22 HITS.44638099._043640.pool.root.1
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc       531 May 17 16:22 boinc_task_state.xml
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc      1028 May 17 16:23 memory_monitor_summary.json
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc   1596741 May 17 16:23 agis_ddmendpoints.agis.ALL.json
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc    432559 May 17 16:23 log.44638099._043640.job.log.tgz.1
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc        96 May 17 16:24 pilot_heartbeat.json
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc      7687 May 17 16:24 heartbeat.json
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc      4808 May 17 16:25 pilotlog.txt
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc   1586750 May 17 16:25 log.44638099._043640.job.log.1
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc       357 May 17 16:25 output.list
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc       620 May 17 16:25 runtime_log
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc   2037760 May 17 16:25 result.tar.gz
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc     11031 May 17 16:25 runtime_log.err
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc       657 May 17 16:25 OKaLDmEiEa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFLJKDm2tSrpm.diag
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc      8192 May 17 16:47 boinc_mmap_file
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc        28 May 17 16:47 wrapper_checkpoint.txt
[2025-05-17 16:47:43] -rw-r--r--. 1 boinc boinc     20556 May 17 16:47 stderr.txt
[2025-05-17 16:47:43] HITS file was successfully produced:
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc 192400092 May 17 16:22 shared/HITS.pool.root.1
[2025-05-17 16:47:43]  *** Contents of shared directory: ***
[2025-05-17 16:47:43] total 405676
[2025-05-17 16:47:43] -rw-r--r--. 2 boinc boinc 220436011 May 17 10:38 ATLAS.root_0
[2025-05-17 16:47:43] -rw-r--r--. 2 boinc boinc     17569 May 17 10:38 start_atlas.sh
[2025-05-17 16:47:43] -rw-r--r--. 2 boinc boinc    508875 May 17 10:38 input.tar.gz
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc 192400092 May 17 16:22 HITS.pool.root.1
[2025-05-17 16:47:43] -rw-------. 1 boinc boinc   2037760 May 17 16:25 result.tar.gz
16:47:45 (17499): run_atlas exited; CPU time 66295.837948
16:47:45 (17499): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN