Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:59:07 (1798752): wrapper (7.7.26015): starting
16:59:07 (1798752): wrapper: running run_atlas (--nthreads 9)
[2025-05-16 16:59:07] Arguments: --nthreads 9
[2025-05-16 16:59:07] Threads: 9
[2025-05-16 16:59:07] Checking for CVMFS
[2025-05-16 16:59:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 16:59:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 16:59:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 16:59:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 16:59:09] 2.12.6.0 3467197 64463 558320 146076 3 688 17005649 32935937 37367 16776704 0 511733873 99.660 451944733 16024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-16 16:59:09] CVMFS is ok
[2025-05-16 16:59:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 16:59:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 16:59:09] Further information can be found at the LHC@home message board.
[2025-05-16 16:59:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 16:59:09] Checking for apptainer binary...
[2025-05-16 16:59:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 16:59:09] Running /usr/bin/apptainer --version
[2025-05-16 16:59:10] apptainer version 1.4.0-1.el9
[2025-05-16 16:59:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 16:59:10] lc-10-11.aglt2.org
[2025-05-16 16:59:10] apptainer works
[2025-05-16 16:59:10] Set ATHENA_PROC_NUMBER=9
[2025-05-16 16:59:10] Set ATHENA_CORE_NUMBER=9
[2025-05-16 16:59:10] Starting ATLAS job with PandaID=6651742875
[2025-05-16 16:59:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 00:34:41]  *** The last 200 lines of the pilot log: ***
[2025-05-17 00:34:41] 2025-05-17 04:34:11,375 | INFO     | monitor loop #1398: job 0:6651742875 is in state 'finished'
[2025-05-17 00:34:41] 2025-05-17 04:34:11,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 00:34:41] 2025-05-17 04:34:13,890 | INFO     | monitor loop #1399: job 0:6651742875 is in state 'finished'
[2025-05-17 00:34:41] 2025-05-17 04:34:13,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 00:34:41] 2025-05-17 04:34:16,498 | INFO     | monitor loop #1400: job 0:6651742875 is in state 'finished'
[2025-05-17 00:34:41] 2025-05-17 04:34:16,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 00:34:41] 2025-05-17 04:34:19,026 | INFO     | monitor loop #1401: job 0:6651742875 is in state 'finished'
[2025-05-17 00:34:41] 2025-05-17 04:34:19,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 00:34:41] 2025-05-17 04:34:19,291 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-17 00:34:41] 2025-05-17 04:34:19,291 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6651742875/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 00:34:41] 2025-05-17 04:34:19,292 | INFO     | extracted standard info from prmon json
[2025-05-17 00:34:41] 2025-05-17 04:34:19,292 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 00:34:41] 2025-05-17 04:34:19,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 00:34:41] 2025-05-17 04:34:19,297 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 00:34:41] 2025-05-17 04:34:19,297 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 00:34:41] 2025-05-17 04:34:19,336 | INFO     | fitting pss+swap vs Time
[2025-05-17 00:34:41] 2025-05-17 04:34:19,337 | INFO     | sum of square deviations: 27141364771.358177
[2025-05-17 00:34:41] 2025-05-17 04:34:19,345 | INFO     | sum of deviations: 359804031761.5002
[2025-05-17 00:34:41] 2025-05-17 04:34:19,346 | INFO     | mean x: 1747442890.9391892
[2025-05-17 00:34:41] 2025-05-17 04:34:19,346 | INFO     | mean y: 2094354.1666666667
[2025-05-17 00:34:41] 2025-05-17 04:34:19,346 | INFO     | -- intersect: -23163173963.37893
[2025-05-17 00:34:41] 2025-05-17 04:34:19,346 | INFO     | intersect: -23163173963.37893
[2025-05-17 00:34:41] 2025-05-17 04:34:19,352 | INFO     | chi2: 8.857716139204106
[2025-05-17 00:34:41] 2025-05-17 04:34:19,353 | INFO     | sum of square deviations: 26234676017.899826
[2025-05-17 00:34:41] 2025-05-17 04:34:19,361 | INFO     | sum of deviations: 411050683575.1549
[2025-05-17 00:34:41] 2025-05-17 04:34:19,361 | INFO     | mean x: 1747442738.4350798
[2025-05-17 00:34:41] 2025-05-17 04:34:19,362 | INFO     | mean y: 2102921.145785877
[2025-05-17 00:34:41] 2025-05-17 04:34:19,362 | INFO     | -- intersect: -27377214881.44858
[2025-05-17 00:34:41] 2025-05-17 04:34:19,362 | INFO     | intersect: -27377214881.44858
[2025-05-17 00:34:41] 2025-05-17 04:34:19,362 | INFO     | chi2: 7.391743091008801
[2025-05-17 00:34:41] 2025-05-17 04:34:19,363 | INFO     | current chi2=7.391743091008801 (change=16.550237388020733 %)
[2025-05-17 00:34:41] 2025-05-17 04:34:19,363 | INFO     | right removable region: 438
[2025-05-17 00:34:41] 2025-05-17 04:34:19,363 | INFO     | sum of square deviations: 26234665040.382725
[2025-05-17 00:34:41] 2025-05-17 04:34:19,399 | INFO     | sum of deviations: 251743590247.09125
[2025-05-17 00:34:41] 2025-05-17 04:34:19,407 | INFO     | mean x: 1747443043.4441915
[2025-05-17 00:34:41] 2025-05-17 04:34:19,409 | INFO     | mean y: 2112505.8200455583
[2025-05-17 00:34:41] 2025-05-17 04:34:19,409 | INFO     | -- intersect: -16766067489.304718
[2025-05-17 00:34:41] 2025-05-17 04:34:19,409 | INFO     | intersect: -16766067489.304718
[2025-05-17 00:34:41] 2025-05-17 04:34:19,410 | INFO     | chi2: 5.7018880222745825
[2025-05-17 00:34:41] 2025-05-17 04:34:19,410 | INFO     | current chi2=5.7018880222745825 (change=35.62801141212778 %)
[2025-05-17 00:34:41] 2025-05-17 04:34:19,410 | INFO     | sum of square deviations: 25348384296.884796
[2025-05-17 00:34:41] 2025-05-17 04:34:19,436 | INFO     | sum of deviations: 181706067814.2947
[2025-05-17 00:34:41] 2025-05-17 04:34:19,436 | INFO     | mean x: 1747443195.9493089
[2025-05-17 00:34:41] 2025-05-17 04:34:19,437 | INFO     | mean y: 2124553.149769585
[2025-05-17 00:34:41] 2025-05-17 04:34:19,437 | INFO     | -- intersect: -12524158311.506617
[2025-05-17 00:34:41] 2025-05-17 04:34:19,437 | INFO     | intersect: -12524158311.506617
[2025-05-17 00:34:41] 2025-05-17 04:34:19,437 | INFO     | chi2: 4.511377610774351
[2025-05-17 00:34:41] 2025-05-17 04:34:19,437 | INFO     | current chi2=4.511377610774351 (change=20.87923170096414 %)
[2025-05-17 00:34:41] 2025-05-17 04:34:19,439 | INFO     | left removable region: 20
[2025-05-17 00:34:41] 2025-05-17 04:34:19,440 | INFO     | sum of square deviations: 22646833005.042953
[2025-05-17 00:34:41] 2025-05-17 04:34:19,448 | INFO     | sum of deviations: 104257416342.53601
[2025-05-17 00:34:41] 2025-05-17 04:34:19,448 | INFO     | mean x: 1747443317.9521532
[2025-05-17 00:34:41] 2025-05-17 04:34:19,448 | INFO     | mean y: 2157268.6267942586
[2025-05-17 00:34:41] 2025-05-17 04:34:19,448 | INFO     | -- intersect: -8042407969.000552
[2025-05-17 00:34:41] 2025-05-17 04:34:19,448 | INFO     | intersect: -8042407969.000552
[2025-05-17 00:34:41] 2025-05-17 04:34:19,449 | INFO     | chi2: 0.8946378799244944
[2025-05-17 00:34:41] 2025-05-17 04:34:19,449 | INFO     | -- intersect: -8042407969.000552
[2025-05-17 00:34:41] 2025-05-17 04:34:19,449 | INFO     | current memory leak: 4.60 B/s (using 418 data points, chi2=0.89)
[2025-05-17 00:34:41] 2025-05-17 04:34:19,450 | INFO     | ..............................
[2025-05-17 00:34:41] 2025-05-17 04:34:19,450 | INFO     | . Timing measurements:
[2025-05-17 00:34:41] 2025-05-17 04:34:19,450 | INFO     | . get job = 0 s
[2025-05-17 00:34:41] 2025-05-17 04:34:19,450 | INFO     | . initial setup = 10 s
[2025-05-17 00:34:41] 2025-05-17 04:34:19,451 | INFO     | . payload setup = 46 s
[2025-05-17 00:34:41] 2025-05-17 04:34:19,455 | INFO     | . stage-in = 0 s
[2025-05-17 00:34:41] 2025-05-17 04:34:19,455 | INFO     | . payload execution = 27062 s
[2025-05-17 00:34:41] 2025-05-17 04:34:19,455 | INFO     | . stage-out = 4 s
[2025-05-17 00:34:41] 2025-05-17 04:34:19,455 | INFO     | . log creation = 0 s
[2025-05-17 00:34:41] 2025-05-17 04:34:19,455 | INFO     | ..............................
[2025-05-17 00:34:41] 2025-05-17 04:34:19,775 | INFO     | 
[2025-05-17 00:34:41] 2025-05-17 04:34:19,775 | INFO     | job summary report
[2025-05-17 00:34:41] 2025-05-17 04:34:19,775 | INFO     | --------------------------------------------------
[2025-05-17 00:34:41] 2025-05-17 04:34:19,775 | INFO     | PanDA job id: 6651742875
[2025-05-17 00:34:41] 2025-05-17 04:34:19,775 | INFO     | task id: 44638099
[2025-05-17 00:34:41] 2025-05-17 04:34:19,775 | INFO     | errors: (none)
[2025-05-17 00:34:41] 2025-05-17 04:34:19,775 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | pilot state: finished 
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | transexitcode: 0
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | exeerrorcode: 0
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | exeerrordiag: 
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | exitcode: 0
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | exitmsg: OK
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | cpuconsumptiontime: 54841 s
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | nevents: 400
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | neventsw: 0
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | pid: 1827850
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | pgrp: 1827850
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | corecount: 9
[2025-05-17 00:34:41] 2025-05-17 04:34:19,776 | INFO     | event service: False
[2025-05-17 00:34:41] 2025-05-17 04:34:19,777 | INFO     | sizes: {0: 2393483, 1: 2393539, 2: 2393766, 3: 2393766, 14: 2393794, 25: 2393822, 36: 2393978, 40: 2394212, 48: 2394240, 27114: 2429909, 27120: 2438850, 27121: 243
[2025-05-17 00:34:41] 2025-05-17 04:34:19,780 | INFO     | --------------------------------------------------
[2025-05-17 00:34:41] 2025-05-17 04:34:19,780 | INFO     | 
[2025-05-17 00:34:41] 2025-05-17 04:34:19,780 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-17 00:34:41] 2025-05-17 04:34:19,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 00:34:41] 2025-05-17 04:34:19,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 00:34:41] 2025-05-17 04:34:19,923 | INFO     | job 6651742875 has completed (purged errors)
[2025-05-17 00:34:41] 2025-05-17 04:34:19,923 | INFO     | overall cleanup function is called
[2025-05-17 00:34:41] 2025-05-17 04:34:20,953 | INFO     | --- collectZombieJob: --- 10, [1827850]
[2025-05-17 00:34:41] 2025-05-17 04:34:20,953 | INFO     | zombie collector waiting for pid 1827850
[2025-05-17 00:34:41] 2025-05-17 04:34:20,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 00:34:41] 2025-05-17 04:34:20,953 | INFO     | collected zombie processes
[2025-05-17 00:34:41] 2025-05-17 04:34:20,954 | INFO     | will attempt to kill all subprocesses of pid=1827850
[2025-05-17 00:34:41] 2025-05-17 04:34:22,487 | INFO     | process IDs to be killed: [1827850] (in reverse order)
[2025-05-17 00:34:41] 2025-05-17 04:34:22,993 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 00:34:41] 2025-05-17 04:34:23,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 00:34:41] 2025-05-17 04:34:23,374 | INFO     | did not find any defunct processes belonging to 1827850
[2025-05-17 00:34:41] 2025-05-17 04:34:23,546 | INFO     | did not find any defunct processes belonging to 1827850
[2025-05-17 00:34:41] 2025-05-17 04:34:23,546 | INFO     | ready for new job
[2025-05-17 00:34:41] 2025-05-17 04:34:23,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 00:34:41] 2025-05-17 04:34:23,565 | INFO     | **************************************
[2025-05-17 00:34:41] 2025-05-17 04:34:23,565 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 00:34:41] 2025-05-17 04:34:23,565 | INFO     | **************************************
[2025-05-17 00:34:41] 2025-05-17 04:34:23,565 | INFO     | 
[2025-05-17 00:34:41] 2025-05-17 04:34:23,603 | INFO     | architecture information:
[2025-05-17 00:34:41] 2025-05-17 04:34:23,610 | INFO     | executing command: cat /etc/os-release
[2025-05-17 00:34:41] 2025-05-17 04:34:23,671 | INFO     | cat /etc/os-release:
[2025-05-17 00:34:41] NAME="CentOS Linux"
[2025-05-17 00:34:41] VERSION="7 (Core)"
[2025-05-17 00:34:41] ID="centos"
[2025-05-17 00:34:41] ID_LIKE="rhel fedora"
[2025-05-17 00:34:41] VERSION_ID="7"
[2025-05-17 00:34:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 00:34:41] ANSI_COLOR="0;31"
[2025-05-17 00:34:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 00:34:41] HOME_URL="https://www.centos.org/"
[2025-05-17 00:34:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 00:34:41] 
[2025-05-17 00:34:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 00:34:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 00:34:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 00:34:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 00:34:41] 
[2025-05-17 00:34:41] 2025-05-17 04:34:23,672 | INFO     | **************************************
[2025-05-17 00:34:41] 2025-05-17 04:34:24,175 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 00:34:41] 2025-05-17 04:34:24,291 | INFO     | sufficient remaining disk space (94639226880 B)
[2025-05-17 00:34:41] 2025-05-17 04:34:24,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 00:34:41] 2025-05-17 04:34:24,292 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 00:34:41] 2025-05-17 04:34:24,292 | INFO     | update_server=False
[2025-05-17 00:34:41] 2025-05-17 04:34:24,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 00:34:41] 2025-05-17 04:34:24,435 | INFO     | all job control threads have been joined
[2025-05-17 00:34:41] 2025-05-17 04:34:24,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 00:34:41] 2025-05-17 04:34:25,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 00:34:41] 2025-05-17 04:34:25,122 | INFO     | aborting loop
[2025-05-17 00:34:41] 2025-05-17 04:34:25,150 | INFO     | all data control threads have been joined
[2025-05-17 00:34:41] 2025-05-17 04:34:25,246 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 00:34:41] 2025-05-17 04:34:25,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 00:34:41] 2025-05-17 04:34:25,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 00:34:41] 2025-05-17 04:34:25,298 | INFO     | [job] retrieve thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:25,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 00:34:41] 2025-05-17 04:34:25,421 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:25,440 | INFO     | [job] control thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:25,586 | INFO     | [payload] failed_post thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:25,787 | INFO     | all payload control threads have been joined
[2025-05-17 00:34:41] 2025-05-17 04:34:25,817 | INFO     | [job] queue monitor thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:25,817 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:25,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:26,144 | INFO     | [job] job monitor thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:26,155 | INFO     | [data] control thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:26,211 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:26,538 | INFO     | [job] validate thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:26,584 | INFO     | [payload] validate_post thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:26,607 | INFO     | [data] copytool_in thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:26,801 | INFO     | [payload] control thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:27,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 00:34:41] 2025-05-17 04:34:27,331 | INFO     | [data] copytool_out thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:31,356 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 00:34:41] 2025-05-17 04:34:33,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824024172352)>', '<ExcThread(monitor, started 139822861645568)>']
[2025-05-17 00:34:41] 2025-05-17 04:34:33,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 00:34:41] 2025-05-17 04:34:33,331 | INFO     | [monitor] control thread has ended
[2025-05-17 00:34:41] 2025-05-17 04:34:38,041 | INFO     | all workflow threads have been joined
[2025-05-17 00:34:41] 2025-05-17 04:34:38,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 00:34:41] 2025-05-17 04:34:38,042 | INFO     | traces error code: 0
[2025-05-17 00:34:41] 2025-05-17 04:34:38,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 00:34:41] 2025-05-17 04:34:40,436 [wrapper] ==== pilot stdout END ====
[2025-05-17 00:34:41] 2025-05-17 04:34:40,457 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 00:34:41] 2025-05-17 04:34:40,477 [wrapper] pilotpid: 1804804
[2025-05-17 00:34:41] 2025-05-17 04:34:40,520 [wrapper] Pilot exit status: 0
[2025-05-17 00:34:41] 2025-05-17 04:34:40,644 [wrapper] pandaids: 6651742875
[2025-05-17 00:34:41] 2025-05-17 04:34:40,960 [wrapper] cleanup supervisor_pilot 2602339 1804805
[2025-05-17 00:34:41] 2025-05-17 04:34:40,983 [wrapper] Test setup, not cleaning
[2025-05-17 00:34:41] 2025-05-17 04:34:41,005 [wrapper] apfmon messages muted
[2025-05-17 00:34:41] 2025-05-17 04:34:41,026 [wrapper] ==== wrapper stdout END ====
[2025-05-17 00:34:41] 2025-05-17 04:34:41,057 [wrapper] ==== wrapper stderr END ====
[2025-05-17 00:34:41]  *** Error codes and diagnostics ***
[2025-05-17 00:34:41]     "exeErrorCode": 0,
[2025-05-17 00:34:41]     "exeErrorDiag": "",
[2025-05-17 00:34:41]     "pilotErrorCode": 0,
[2025-05-17 00:34:41]     "pilotErrorDiag": "",
[2025-05-17 00:34:41]  *** Listing of results directory ***
[2025-05-17 00:34:41] total 414628
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas    495897 May 16 09:22 pilot3.tar.gz
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas      5111 May 16 09:52 queuedata.json
[2025-05-17 00:34:41] -rwx------. 1 boincer umatlas     37140 May 16 09:53 runpilot2-wrapper.sh
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas       100 May 16 16:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 00:34:41] -rwxr-xr-x. 1 boincer umatlas      7986 May 16 16:59 run_atlas
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas       105 May 16 16:59 job.xml
[2025-05-17 00:34:41] -rw-r--r--. 2 boincer umatlas 222315165 May 16 16:59 EVNT.44638096._000802.pool.root.1
[2025-05-17 00:34:41] -rw-r--r--. 2 boincer umatlas     17569 May 16 16:59 start_atlas.sh
[2025-05-17 00:34:41] drwxrwx--x. 2 boincer umatlas      4096 May 16 16:59 shared
[2025-05-17 00:34:41] -rw-r--r--. 2 boincer umatlas    508874 May 16 16:59 input.tar.gz
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas         0 May 16 16:59 boinc_lockfile
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas      2538 May 16 16:59 pandaJob.out
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas       467 May 16 16:59 setup.sh.local
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas    994643 May 16 17:00 agis_schedconf.cvmfs.json
[2025-05-17 00:34:41] drwx------. 4 boincer umatlas      4096 May 16 17:00 pilot3
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas      6865 May 17 00:29 init_data.xml
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas 193437787 May 17 00:32 HITS.44638099._040815.pool.root.1
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas       531 May 17 00:32 boinc_task_state.xml
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas        95 May 17 00:33 pilot_heartbeat.json
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas      1045 May 17 00:33 memory_monitor_summary.json
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas   1596741 May 17 00:33 agis_ddmendpoints.agis.ALL.json
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas    519717 May 17 00:33 log.44638099._040815.job.log.tgz.1
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas      7727 May 17 00:34 heartbeat.json
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas      8192 May 17 00:34 boinc_mmap_file
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas        28 May 17 00:34 wrapper_checkpoint.txt
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas      4353 May 17 00:34 pilotlog.txt
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas   1970109 May 17 00:34 log.44638099._040815.job.log.1
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas       357 May 17 00:34 output.list
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas       620 May 17 00:34 runtime_log
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas   2508800 May 17 00:34 result.tar.gz
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas     11419 May 17 00:34 runtime_log.err
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas       657 May 17 00:34 9sFKDmtfAa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX8LKDmXQmWdm.diag
[2025-05-17 00:34:41] -rw-r--r--. 1 boincer umatlas     21226 May 17 00:34 stderr.txt
[2025-05-17 00:34:41] HITS file was successfully produced:
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas 193437787 May 17 00:32 shared/HITS.pool.root.1
[2025-05-17 00:34:41]  *** Contents of shared directory: ***
[2025-05-17 00:34:41] total 408996
[2025-05-17 00:34:41] -rw-r--r--. 2 boincer umatlas 222315165 May 16 16:59 ATLAS.root_0
[2025-05-17 00:34:41] -rw-r--r--. 2 boincer umatlas     17569 May 16 16:59 start_atlas.sh
[2025-05-17 00:34:41] -rw-r--r--. 2 boincer umatlas    508874 May 16 16:59 input.tar.gz
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas 193437787 May 17 00:32 HITS.pool.root.1
[2025-05-17 00:34:41] -rw-------. 1 boincer umatlas   2508800 May 17 00:34 result.tar.gz
00:34:42 (1798752): run_atlas exited; CPU time 56361.351608
00:34:42 (1798752): called boinc_finish(0)

</stderr_txt>
]]>

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