Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-16 20:52:08 (2031016): Detected: vboxwrapper 26206
2025-05-16 20:52:08 (2031016): Detected: BOINC client v8.2.2
2025-05-16 20:52:08 (2031016): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-05-16 20:52:08 (2031016): Successfully copied 'init_data.xml' to the shared directory.
2025-05-16 20:52:08 (2031016): Create VM. (boinc_d0c33dff95e2ad81, slot#1)
2025-05-16 20:52:08 (2031016): Setting Memory Size for VM. (4096MB)
2025-05-16 20:52:09 (2031016): Setting CPU Count for VM. (1)
2025-05-16 20:52:09 (2031016): Setting Chipset Options for VM.
2025-05-16 20:52:09 (2031016): Setting Graphics Controller Options for VM.
2025-05-16 20:52:09 (2031016): Setting Boot Options for VM.
2025-05-16 20:52:09 (2031016): Setting Network Configuration for NAT.
2025-05-16 20:52:09 (2031016): Enabling VM Network Access.
2025-05-16 20:52:09 (2031016): Disabling USB Support for VM.
2025-05-16 20:52:09 (2031016): Disabling COM Port Support for VM.
2025-05-16 20:52:09 (2031016): Disabling LPT Port Support for VM.
2025-05-16 20:52:09 (2031016): Disabling Audio Support for VM.
2025-05-16 20:52:10 (2031016): Disabling Clipboard Support for VM.
2025-05-16 20:52:10 (2031016): Disabling Drag and Drop Support for VM.
2025-05-16 20:52:10 (2031016): Adding storage controller(s) to VM.
2025-05-16 20:52:10 (2031016): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-16 20:52:10 (2031016): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-16 20:52:10 (2031016): forwarding host port 55901 to guest port 80
2025-05-16 20:52:10 (2031016): Enabling remote desktop for VM.
2025-05-16 20:52:10 (2031016): Enabling shared directory for VM.
2025-05-16 20:52:11 (2031016): Starting VM using VBoxManage interface. (boinc_d0c33dff95e2ad81, slot#1)
2025-05-16 20:52:12 (2031016): Successfully started VM. (PID = '2031404')
2025-05-16 20:52:12 (2031016): Reporting VM Process ID to BOINC.
2025-05-16 20:52:12 (2031016): Guest Log: BIOS: VirtualBox 7.0.20
2025-05-16 20:52:12 (2031016): Guest Log: CPUID EDX: 0x178bfbff
2025-05-16 20:52:12 (2031016): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-16 20:52:12 (2031016): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-16 20:52:12 (2031016): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-16 20:52:12 (2031016): Detected: Web Application Enabled (http://localhost:55901)
2025-05-16 20:52:12 (2031016): Detected: Remote Desktop Enabled (localhost:60159)
2025-05-16 20:52:12 (2031016): Preference change detected
2025-05-16 20:52:12 (2031016): Setting CPU throttle for VM. (100%)
2025-05-16 20:52:12 (2031016): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-16 20:52:14 (2031016): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-16 20:52:14 (2031016): Guest Log: BIOS: Booting from Hard Disk...
2025-05-16 20:52:17 (2031016): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-16 20:52:17 (2031016): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-16 20:52:17 (2031016): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-16 20:52:22 (2031016): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-16 20:52:22 (2031016): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-16 20:52:34 (2031016): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-16 20:52:34 (2031016): Guest Log: 00:00:00.000253 main     Log opened 2025-05-16T18:52:31.981307000Z
2025-05-16 20:52:34 (2031016): Guest Log: 00:00:00.000471 main     OS Product: Linux
2025-05-16 20:52:34 (2031016): Guest Log: 00:00:00.000552 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-16 20:52:34 (2031016): Guest Log: 00:00:00.000620 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-16 20:52:34 (2031016): Guest Log: 00:00:00.000688 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-16 20:52:34 (2031016): Guest Log: 00:00:00.000689 main     Process ID: 1235
2025-05-16 20:52:34 (2031016): Guest Log: 00:00:00.000690 main     Package type: LINUX_64BITS_GENERIC
2025-05-16 20:52:34 (2031016): Guest Log: 00:00:00.003202 main     5.2.32 r132073 started. Verbose level = 0
2025-05-16 20:52:34 (2031016): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-16 20:52:34 (2031016): Guest Log: [INFO] Mounting shared directory
2025-05-16 20:52:34 (2031016): Guest Log: [INFO] Checking for init_data.xml
2025-05-16 20:52:37 (2031016): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-16 20:52:37 (2031016): Guest Log: [INFO] Detected branch: prod
2025-05-16 20:52:37 (2031016): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-16 20:52:37 (2031016): Guest Log: Copying input files
2025-05-16 20:52:40 (2031016): Guest Log: Copied input files into RunAtlas.
2025-05-16 20:52:40 (2031016): Guest Log: Detected user-configured HTTP proxy at http://localhost:3128 - will set in /etc/cvmfs/default.local
2025-05-16 20:52:57 (2031016): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-16 20:52:58 (2031016): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-16 20:52:58 (2031016): Guest Log: 2.6.3.0 1504 0 29520 146074 4 1 3117515 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
2025-05-16 20:52:58 (2031016): Guest Log: copied the webapp to /var/www
2025-05-16 20:52:59 (2031016): Guest Log: core_number=1
2025-05-16 20:52:59 (2031016): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-16 20:52:59 (2031016): Guest Log:  *** Starting ATLAS job. (PandaID=6651711787 taskID=44638099) ***
2025-05-16 22:31:13 (2031016): Status Report: Elapsed Time: '6000.000000'
2025-05-16 22:31:13 (2031016): Status Report: CPU Time: '5200.930000'
2025-05-17 00:10:14 (2031016): Status Report: Elapsed Time: '12000.000000'
2025-05-17 00:10:14 (2031016): Status Report: CPU Time: '11140.170000'
2025-05-17 01:49:15 (2031016): Status Report: Elapsed Time: '18000.000000'
2025-05-17 01:49:15 (2031016): Status Report: CPU Time: '17086.260000'
2025-05-17 03:28:16 (2031016): Status Report: Elapsed Time: '24000.000000'
2025-05-17 03:28:16 (2031016): Status Report: CPU Time: '23031.470000'
2025-05-17 05:07:17 (2031016): Status Report: Elapsed Time: '30000.000000'
2025-05-17 05:07:17 (2031016): Status Report: CPU Time: '28976.790000'
2025-05-17 06:46:18 (2031016): Status Report: Elapsed Time: '36000.000000'
2025-05-17 06:46:18 (2031016): Status Report: CPU Time: '34923.870000'
2025-05-17 08:25:19 (2031016): Status Report: Elapsed Time: '42000.000000'
2025-05-17 08:25:19 (2031016): Status Report: CPU Time: '40869.640000'
2025-05-17 09:26:57 (2031016): Guest Log:  *** Job finished ***
2025-05-17 09:26:57 (2031016): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:42,619 | INFO     | [data] queue_monitor thread has finished
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:48,117 | INFO     | job.realtimelogging is not enabled
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:49,119 | INFO     | [payload] run_realtimelog thread has finished
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:51,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139806699767616)>', '<ExcThread(monitor, started 139806252185344)>']
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:51,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:51,563 | INFO     | [monitor] control thread has ended
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,182 | INFO     | all workflow threads have been joined
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,182 | INFO     | end of generic workflow (traces error code: 0)
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,182 | INFO     | traces error code: 0
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,296 [wrapper] ==== pilot stdout END ====
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,302 [wrapper] ==== wrapper stdout RESUME ====
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,306 [wrapper] pilotpid: 5792
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,311 [wrapper] Pilot exit status: 0
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,415 [wrapper] pandaids: 6651711787
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,446 [wrapper] cleanup supervisor_pilot 30434 5793
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,454 [wrapper] Test setup, not cleaning
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,460 [wrapper] apfmon messages muted
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,465 [wrapper] ==== wrapper stdout END ====
2025-05-17 09:26:57 (2031016): Guest Log: 2025-05-17 07:26:56,470 [wrapper] ==== wrapper stderr END ====
2025-05-17 09:26:57 (2031016): Guest Log:  *** Error codes and diagnostics ***
2025-05-17 09:26:57 (2031016): Guest Log:     "exeErrorCode": 0,
2025-05-17 09:26:57 (2031016): Guest Log:     "exeErrorDiag": "",
2025-05-17 09:26:57 (2031016): Guest Log:     "pilotErrorCode": 0,
2025-05-17 09:26:57 (2031016): Guest Log:     "pilotErrorDiag": "",
2025-05-17 09:26:57 (2031016): Guest Log:  *** Listing of results directory ***
2025-05-17 09:26:57 (2031016): Guest Log: total 200156
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 16 12:35 pilot3.tar.gz
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 16 12:42 queuedata.json
2025-05-17 09:26:57 (2031016): Guest Log: -rwx------. 1 atlas atlas     37140 May 16 12:43 runpilot2-wrapper.sh
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 atlas atlas      9706 May 16 18:52 init_data.xml
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 atlas atlas    508879 May 16 18:52 input.tar.gz
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 atlas atlas     17569 May 16 18:52 start_atlas.sh
2025-05-17 09:26:57 (2031016): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 16 18:52 EVNT.44638096._000773.pool.root.1 -> /data/./ATLAS.root_0
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 atlas atlas      2539 May 16 18:52 pandaJob.out
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas       456 May 16 18:53 setup.sh.local
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas    994635 May 16 18:54 agis_schedconf.cvmfs.json
2025-05-17 09:26:57 (2031016): Guest Log: drwx------. 4 atlas atlas      4096 May 16 18:55 pilot3
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas 192226369 May 17 07:25 HITS.44638099._040121.pool.root.1
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas        95 May 17 07:25 pilot_heartbeat.json
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas      1022 May 17 07:26 memory_monitor_summary.json
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas   1596741 May 17 07:26 agis_ddmendpoints.agis.ALL.json
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas    562055 May 17 07:26 log.44638099._040121.job.log.tgz.1
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas      7708 May 17 07:26 heartbeat.json
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas      4608 May 17 07:26 pilotlog.txt
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas   3915280 May 17 07:26 log.44638099._040121.job.log.1
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas       357 May 17 07:26 output.list
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 17 07:26 runtime_log
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas   4495360 May 17 07:26 result.tar.gz
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 atlas atlas     11157 May 17 07:26 runtime_log.err
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas       657 May 17 07:26 izuLDmVa9Z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT1LKDmQgBRRm.diag
2025-05-17 09:26:57 (2031016): Guest Log: Looking for outputfile HITS.44638099._040121.pool.root.1
2025-05-17 09:26:57 (2031016): Guest Log: HITS file was successfully produced
2025-05-17 09:26:57 (2031016): Guest Log: -rw-------. 1 atlas atlas 192226369 May 17 07:25 /home/atlas/RunAtlas/HITS.44638099._040121.pool.root.1
2025-05-17 09:26:57 (2031016): Guest Log: Successfully finished the ATLAS job!
2025-05-17 09:26:57 (2031016): Guest Log: Copying the results back to the shared directory!
2025-05-17 09:26:57 (2031016): Guest Log:  *** Contents of shared directory: ***
2025-05-17 09:26:57 (2031016): Guest Log: total 222696
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 root root 222991838 May 16 18:52 ATLAS.root_0
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 root root      9706 May 16 18:52 init_data.xml
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 root root    508879 May 16 18:52 input.tar.gz
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 root root   4495360 May 17 07:26 result.tar.gz
2025-05-17 09:26:57 (2031016): Guest Log: -rw-r--r--. 1 root root     17569 May 16 18:52 start_atlas.sh
2025-05-17 09:26:57 (2031016): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-17 09:26:57 (2031016): VM Completion File Detected.
2025-05-17 09:26:57 (2031016): Powering off VM.
2025-05-17 09:26:58 (2031016): Successfully stopped VM.
2025-05-17 09:26:58 (2031016): Deregistering VM. (boinc_d0c33dff95e2ad81, slot#1)
2025-05-17 09:26:58 (2031016): Removing network bandwidth throttle group from VM.
2025-05-17 09:26:58 (2031016): Removing VM from VirtualBox.
09:27:03 (2031016): called boinc_finish(0)

</stderr_txt>
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