Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:40:03 (7318): wrapper (7.7.26015): starting
20:40:03 (7318): wrapper: running run_atlas (--nthreads 3)
[2025-05-16 20:40:03] Arguments: --nthreads 3
[2025-05-16 20:40:03] Threads: 3
[2025-05-16 20:40:03] Checking for CVMFS
[2025-05-16 20:40:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 20:40:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 20:40:05] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 20:40:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 20:40:05] 2.9.2.0 7515 0 28808 146074 3 1 9591 36864000 0 130560 0 0 0.000 1237 15858 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-16 20:40:05] CVMFS is ok
[2025-05-16 20:40:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 20:40:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 20:40:05] Further information can be found at the LHC@home message board.
[2025-05-16 20:40:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 20:40:05] Checking for apptainer binary...
[2025-05-16 20:40:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 20:40:05] Running /usr/bin/apptainer --version
[2025-05-16 20:40:05] apptainer version 1.3.6-6.1
[2025-05-16 20:40:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 20:40:05] pclinst
[2025-05-16 20:40:05] apptainer works
[2025-05-16 20:40:05] Set ATHENA_PROC_NUMBER=3
[2025-05-16 20:40:05] Set ATHENA_CORE_NUMBER=3
[2025-05-16 20:40:05] Starting ATLAS job with PandaID=6651814106
[2025-05-16 20:40:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 22:36:22]  *** The last 200 lines of the pilot log: ***
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | mean x: 1747424293.0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | mean y: 2304566.9380530976
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | -- intersect: -123168007018.76323
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | intersect: -123168007018.76323
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | chi2: 4.241703542572457
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | sum of square deviations: 390582207.0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | sum of deviations: 30527618055.0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | mean x: 1747424140.5
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | mean y: 2301862.907407407
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | -- intersect: -136575083858.27744
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | intersect: -136575083858.27744
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | chi2: 4.24542762641706
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | current chi2=4.24542762641706 (change=-0.08779689120715624 %)
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | right removable region: 107
[2025-05-16 22:36:22] 2025-05-16 20:36:02,594 | INFO     | sum of square deviations: 390582207.0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | sum of deviations: 6774485082.500008
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | mean x: 1747424445.5
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | mean y: 2370524.1018518517
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | -- intersect: -30305975905.09326
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | intersect: -30305975905.09326
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | chi2: 1.693203641509157
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | current chi2=1.693203641509157 (change=60.08199006566397 %)
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | sum of square deviations: 338804492.0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | sum of deviations: -9558479911.999998
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | mean x: 1747424598.0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | mean y: 2418728.330097087
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | -- intersect: 49301419515.24313
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | intersect: 49301419515.24313
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | chi2: 0.6109257580299916
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | current chi2=0.6109257580299916 (change=63.91894376712586 %)
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | sum of square deviations: 291817564.5
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | sum of deviations: -15592643831.999998
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | mean x: 1747424750.5
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | mean y: 2437581.836734694
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | -- intersect: 93372320249.63606
[2025-05-16 22:36:22] 2025-05-16 20:36:02,595 | INFO     | intersect: 93372320249.63606
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | chi2: 0.1604644491714493
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | current chi2=0.1604644491714493 (change=73.73421449950196 %)
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | sum of square deviations: 249388862.0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | sum of deviations: -11868639460.0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | mean x: 1747424903.0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | mean y: 2424167.3225806453
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | -- intersect: 83163941449.24704
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | intersect: 83163941449.24704
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | chi2: 0.15176417080109705
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | current chi2=0.15176417080109705 (change=5.421935148424299 %)
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | left removable region: 40
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | sum of square deviations: 93240818.0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | sum of deviations: 231481336.00000024
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | mean x: 1747425330.0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | mean y: 2370915.0447761193
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | -- intersect: -4335818717.189481
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | intersect: -4335818717.189481
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | chi2: 0.0018299092073420246
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | -- intersect: -4335818717.189481
[2025-05-16 22:36:22] 2025-05-16 20:36:02,596 | INFO     | current memory leak: 2.48 B/s (using 67 data points, chi2=0.00)
[2025-05-16 22:36:22] 2025-05-16 20:36:02,597 | INFO     | ..............................
[2025-05-16 22:36:22] 2025-05-16 20:36:02,597 | INFO     | . Timing measurements:
[2025-05-16 22:36:22] 2025-05-16 20:36:02,597 | INFO     | . get job = 0 s
[2025-05-16 22:36:22] 2025-05-16 20:36:02,597 | INFO     | . initial setup = 1 s
[2025-05-16 22:36:22] 2025-05-16 20:36:02,597 | INFO     | . payload setup = 39 s
[2025-05-16 22:36:22] 2025-05-16 20:36:02,597 | INFO     | . stage-in = 0 s
[2025-05-16 22:36:22] 2025-05-16 20:36:02,597 | INFO     | . payload execution = 6878 s
[2025-05-16 22:36:22] 2025-05-16 20:36:02,597 | INFO     | . stage-out = 0 s
[2025-05-16 22:36:22] 2025-05-16 20:36:02,597 | INFO     | . log creation = 0 s
[2025-05-16 22:36:22] 2025-05-16 20:36:02,597 | INFO     | ..............................
[2025-05-16 22:36:22] 2025-05-16 20:36:02,627 | INFO     | 
[2025-05-16 22:36:22] 2025-05-16 20:36:02,627 | INFO     | job summary report
[2025-05-16 22:36:22] 2025-05-16 20:36:02,627 | INFO     | --------------------------------------------------
[2025-05-16 22:36:22] 2025-05-16 20:36:02,627 | INFO     | PanDA job id: 6651814106
[2025-05-16 22:36:22] 2025-05-16 20:36:02,627 | INFO     | task id: 44638099
[2025-05-16 22:36:22] 2025-05-16 20:36:02,627 | INFO     | errors: (none)
[2025-05-16 22:36:22] 2025-05-16 20:36:02,627 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 22:36:22] 2025-05-16 20:36:02,627 | INFO     | pilot state: finished 
[2025-05-16 22:36:22] 2025-05-16 20:36:02,627 | INFO     | transexitcode: 0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | exeerrorcode: 0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | exeerrordiag: 
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | exitcode: 0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | exitmsg: OK
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | cpuconsumptiontime: 18206 s
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | nevents: 400
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | neventsw: 0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | pid: 17960
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | pgrp: 17960
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | corecount: 3
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | event service: False
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | sizes: {0: 2393486, 1: 2393741, 3: 2393947, 11: 2393975, 6922: 2429960, 6924: 2429960, 6930: 2430286}
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | --------------------------------------------------
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | 
[2025-05-16 22:36:22] 2025-05-16 20:36:02,628 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 22:36:22] 2025-05-16 20:36:02,640 | INFO     | job 6651814106 has completed (purged errors)
[2025-05-16 22:36:22] 2025-05-16 20:36:02,641 | INFO     | overall cleanup function is called
[2025-05-16 22:36:22] 2025-05-16 20:36:03,647 | INFO     | --- collectZombieJob: --- 10, [17960]
[2025-05-16 22:36:22] 2025-05-16 20:36:03,647 | INFO     | zombie collector waiting for pid 17960
[2025-05-16 22:36:22] 2025-05-16 20:36:03,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 22:36:22] 2025-05-16 20:36:03,647 | INFO     | collected zombie processes
[2025-05-16 22:36:22] 2025-05-16 20:36:03,647 | INFO     | will attempt to kill all subprocesses of pid=17960
[2025-05-16 22:36:22] 2025-05-16 20:36:03,689 | INFO     | process IDs to be killed: [17960] (in reverse order)
[2025-05-16 22:36:22] 2025-05-16 20:36:03,711 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 22:36:22] 2025-05-16 20:36:03,712 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 22:36:22] 2025-05-16 20:36:03,713 | INFO     | did not find any defunct processes belonging to 17960
[2025-05-16 22:36:22] 2025-05-16 20:36:03,714 | INFO     | did not find any defunct processes belonging to 17960
[2025-05-16 22:36:22] 2025-05-16 20:36:03,714 | INFO     | ready for new job
[2025-05-16 22:36:22] 2025-05-16 20:36:03,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 22:36:22] 2025-05-16 20:36:03,715 | INFO     | **************************************
[2025-05-16 22:36:22] 2025-05-16 20:36:03,715 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 22:36:22] 2025-05-16 20:36:03,715 | INFO     | **************************************
[2025-05-16 22:36:22] 2025-05-16 20:36:03,715 | INFO     | 
[2025-05-16 22:36:22] 2025-05-16 20:36:03,715 | INFO     | architecture information:
[2025-05-16 22:36:22] 2025-05-16 20:36:03,715 | INFO     | executing command: cat /etc/os-release
[2025-05-16 22:36:22] 2025-05-16 20:36:03,723 | INFO     | cat /etc/os-release:
[2025-05-16 22:36:22] NAME="CentOS Linux"
[2025-05-16 22:36:22] VERSION="7 (Core)"
[2025-05-16 22:36:22] ID="centos"
[2025-05-16 22:36:22] ID_LIKE="rhel fedora"
[2025-05-16 22:36:22] VERSION_ID="7"
[2025-05-16 22:36:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 22:36:22] ANSI_COLOR="0;31"
[2025-05-16 22:36:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 22:36:22] HOME_URL="https://www.centos.org/"
[2025-05-16 22:36:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 22:36:22] 
[2025-05-16 22:36:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 22:36:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 22:36:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 22:36:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 22:36:22] 
[2025-05-16 22:36:22] 2025-05-16 20:36:03,724 | INFO     | **************************************
[2025-05-16 22:36:22] 2025-05-16 20:36:04,227 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-16 22:36:22] 2025-05-16 20:36:04,239 | INFO     | sufficient remaining disk space (360540274688 B)
[2025-05-16 22:36:22] 2025-05-16 20:36:04,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 22:36:22] 2025-05-16 20:36:04,240 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 22:36:22] 2025-05-16 20:36:04,240 | INFO     | update_server=False
[2025-05-16 22:36:22] 2025-05-16 20:36:04,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 22:36:22] 2025-05-16 20:36:04,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 22:36:22] 2025-05-16 20:36:04,240 | INFO     | aborting loop
[2025-05-16 22:36:22] 2025-05-16 20:36:04,240 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-16 22:36:22] 2025-05-16 20:36:04,240 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 22:36:22] 2025-05-16 20:36:04,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 22:36:22] 2025-05-16 20:36:04,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 22:36:22] 2025-05-16 20:36:04,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 22:36:22] 2025-05-16 20:36:04,279 | INFO     | all payload control threads have been joined
[2025-05-16 22:36:22] 2025-05-16 20:36:04,892 | INFO     | all job control threads have been joined
[2025-05-16 22:36:22] 2025-05-16 20:36:05,138 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 22:36:22] 2025-05-16 20:36:05,245 | INFO     | [job] retrieve thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:05,246 | INFO     | [job] job monitor thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:05,246 | INFO     | [job] queue monitor thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:05,285 | INFO     | [payload] control thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:05,318 | INFO     | all data control threads have been joined
[2025-05-16 22:36:22] 2025-05-16 20:36:05,683 | INFO     | [data] copytool_in thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:05,803 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:05,898 | INFO     | [job] control thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:06,090 | INFO     | [job] validate thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:06,183 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:06,186 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:06,324 | INFO     | [data] control thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:06,536 | INFO     | [payload] validate_post thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:06,789 | INFO     | [payload] failed_post thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:06,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 22:36:22] 2025-05-16 20:36:07,144 | INFO     | [data] copytool_out thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:10,982 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:15,219 | INFO     | job.realtimelogging is not enabled
[2025-05-16 22:36:22] 2025-05-16 20:36:16,225 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 22:36:22] 2025-05-16 20:36:17,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522528143168)>', '<ExcThread(monitor, started 140522043721472)>']
[2025-05-16 22:36:22] 2025-05-16 20:36:18,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 22:36:22] 2025-05-16 20:36:18,315 | INFO     | [monitor] control thread has ended
[2025-05-16 22:36:22] 2025-05-16 20:36:22,591 | INFO     | all workflow threads have been joined
[2025-05-16 22:36:22] 2025-05-16 20:36:22,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 22:36:22] 2025-05-16 20:36:22,592 | INFO     | traces error code: 0
[2025-05-16 22:36:22] 2025-05-16 20:36:22,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 22:36:22] 2025-05-16 20:36:22,642 [wrapper] ==== pilot stdout END ====
[2025-05-16 22:36:22] 2025-05-16 20:36:22,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 22:36:22] 2025-05-16 20:36:22,646 [wrapper] pilotpid: 11519
[2025-05-16 22:36:22] 2025-05-16 20:36:22,649 [wrapper] Pilot exit status: 0
[2025-05-16 22:36:22] 2025-05-16 20:36:22,730 [wrapper] pandaids: 6651814106
[2025-05-16 22:36:22] 2025-05-16 20:36:22,747 [wrapper] cleanup supervisor_pilot   32549 11520
[2025-05-16 22:36:22] 2025-05-16 20:36:22,750 [wrapper] Test setup, not cleaning
[2025-05-16 22:36:22] 2025-05-16 20:36:22,752 [wrapper] apfmon messages muted
[2025-05-16 22:36:22] 2025-05-16 20:36:22,754 [wrapper] ==== wrapper stdout END ====
[2025-05-16 22:36:22] 2025-05-16 20:36:22,757 [wrapper] ==== wrapper stderr END ====
[2025-05-16 22:36:22]  *** Error codes and diagnostics ***
[2025-05-16 22:36:22]     "exeErrorCode": 0,
[2025-05-16 22:36:22]     "exeErrorDiag": "",
[2025-05-16 22:36:22]     "pilotErrorCode": 0,
[2025-05-16 22:36:22]     "pilotErrorDiag": "",
[2025-05-16 22:36:22]  *** Listing of results directory ***
[2025-05-16 22:36:22] total 425436
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc    495897 May 16 17:18 pilot3.tar.gz
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc      5111 May 16 17:41 queuedata.json
[2025-05-16 22:36:22] -rwx------ 1 boinc boinc     37140 May 16 17:41 runpilot2-wrapper.sh
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc       100 May 16 20:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 22:36:22] -rwxr-xr-x 1 boinc boinc      7986 May 16 20:40 run_atlas
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc       105 May 16 20:40 job.xml
[2025-05-16 22:36:22] -rw-r--r-- 2 boinc boinc 223774266 May 16 20:40 EVNT.44638096._000976.pool.root.1
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc      6912 May 16 20:40 init_data.xml
[2025-05-16 22:36:22] drwxrwx--x 2 boinc boinc      4096 May 16 20:40 shared
[2025-05-16 22:36:22] -rw-r--r-- 2 boinc boinc    508877 May 16 20:40 input.tar.gz
[2025-05-16 22:36:22] -rw-r--r-- 2 boinc boinc     17569 May 16 20:40 start_atlas.sh
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc         0 May 16 20:40 boinc_lockfile
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc      2538 May 16 20:40 pandaJob.out
[2025-05-16 22:36:22] -rw------- 1 boinc boinc       424 May 16 20:40 setup.sh.local
[2025-05-16 22:36:22] -rw------- 1 boinc boinc    994635 May 16 20:40 agis_schedconf.cvmfs.json
[2025-05-16 22:36:22] -rw------- 1 boinc boinc   1596741 May 16 20:40 agis_ddmendpoints.agis.ALL.json
[2025-05-16 22:36:22] drwx------ 4 boinc boinc      4096 May 16 20:40 pilot3
[2025-05-16 22:36:22] -rw------- 1 boinc boinc 206233677 May 16 22:35 HITS.44638099._042034.pool.root.1
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc       529 May 16 22:35 boinc_task_state.xml
[2025-05-16 22:36:22] -rw------- 1 boinc boinc      1020 May 16 22:35 memory_monitor_summary.json
[2025-05-16 22:36:22] -rw------- 1 boinc boinc        95 May 16 22:35 pilot_heartbeat.json
[2025-05-16 22:36:22] -rw------- 1 boinc boinc    241478 May 16 22:35 log.44638099._042034.job.log.tgz.1
[2025-05-16 22:36:22] -rw------- 1 boinc boinc      7662 May 16 22:36 heartbeat.json
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc      8192 May 16 22:36 boinc_mmap_file
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc        27 May 16 22:36 wrapper_checkpoint.txt
[2025-05-16 22:36:22] -rw------- 1 boinc boinc      4552 May 16 22:36 pilotlog.txt
[2025-05-16 22:36:22] -rw------- 1 boinc boinc    655954 May 16 22:36 log.44638099._042034.job.log.1
[2025-05-16 22:36:22] -rw------- 1 boinc boinc       357 May 16 22:36 output.list
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc       620 May 16 22:36 runtime_log
[2025-05-16 22:36:22] -rw------- 1 boinc boinc    911360 May 16 22:36 result.tar.gz
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc     11104 May 16 22:36 runtime_log.err
[2025-05-16 22:36:22] -rw------- 1 boinc boinc       660 May 16 22:36 DjzKDmANCa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVKMKDmryRg4m.diag
[2025-05-16 22:36:22] -rw-r--r-- 1 boinc boinc     20669 May 16 22:36 stderr.txt
[2025-05-16 22:36:22] HITS file was successfully produced:
[2025-05-16 22:36:22] -rw------- 1 boinc boinc 206233677 May 16 22:35 shared/HITS.pool.root.1
[2025-05-16 22:36:22]  *** Contents of shared directory: ***
[2025-05-16 22:36:22] total 421356
[2025-05-16 22:36:22] -rw-r--r-- 2 boinc boinc 223774266 May 16 20:40 ATLAS.root_0
[2025-05-16 22:36:22] -rw-r--r-- 2 boinc boinc    508877 May 16 20:40 input.tar.gz
[2025-05-16 22:36:22] -rw-r--r-- 2 boinc boinc     17569 May 16 20:40 start_atlas.sh
[2025-05-16 22:36:22] -rw------- 1 boinc boinc 206233677 May 16 22:35 HITS.pool.root.1
[2025-05-16 22:36:22] -rw------- 1 boinc boinc    911360 May 16 22:36 result.tar.gz
22:36:24 (7318): run_atlas exited; CPU time 18233.004169
22:36:24 (7318): called boinc_finish(0)

</stderr_txt>
]]>

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