Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:31:06 (3345878): wrapper (7.7.26015): starting
14:31:06 (3345878): wrapper: running run_atlas (--nthreads 8)
[2025-05-16 14:31:06] Arguments: --nthreads 8
[2025-05-16 14:31:06] Threads: 8
[2025-05-16 14:31:06] Checking for CVMFS
[2025-05-16 14:31:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 14:31:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 14:31:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 14:31:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 14:31:08] 2.12.6.0 7820 4334 156456 146074 0 242 26051844 40960000 41217 16776704 0 50576392 99.701 39011732 36252 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-16 14:31:08] CVMFS is ok
[2025-05-16 14:31:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 14:31:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 14:31:08] Further information can be found at the LHC@home message board.
[2025-05-16 14:31:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 14:31:08] Checking for apptainer binary...
[2025-05-16 14:31:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 14:31:08] Running /usr/bin/apptainer --version
[2025-05-16 14:31:08] apptainer version 1.4.0-1.el9
[2025-05-16 14:31:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 14:31:09] c8-7-6.aglt2.org
[2025-05-16 14:31:09] apptainer works
[2025-05-16 14:31:09] Set ATHENA_PROC_NUMBER=8
[2025-05-16 14:31:09] Set ATHENA_CORE_NUMBER=8
[2025-05-16 14:31:09] Starting ATLAS job with PandaID=6651711736
[2025-05-16 14:31:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 18:03:20]  *** The last 200 lines of the pilot log: ***
[2025-05-16 18:03:20] 2025-05-16 21:58:24,121 | INFO     | intersect: -109676331172.91808
[2025-05-16 18:03:20] 2025-05-16 21:58:24,121 | INFO     | chi2: 7.529308316116185
[2025-05-16 18:03:20] 2025-05-16 21:58:24,121 | INFO     | current chi2=7.529308316116185 (change=9.592635639278026 %)
[2025-05-16 18:03:20] 2025-05-16 21:58:24,121 | INFO     | right removable region: 191
[2025-05-16 18:03:20] 2025-05-16 21:58:24,121 | INFO     | sum of square deviations: 2194545794.453125
[2025-05-16 18:03:20] 2025-05-16 21:58:24,122 | INFO     | sum of deviations: 80322828977.15625
[2025-05-16 18:03:20] 2025-05-16 21:58:24,122 | INFO     | mean x: 1747426759.765625
[2025-05-16 18:03:20] 2025-05-16 21:58:24,122 | INFO     | mean y: 2059670.78125
[2025-05-16 18:03:20] 2025-05-16 21:58:24,122 | INFO     | -- intersect: -63955712880.38918
[2025-05-16 18:03:20] 2025-05-16 21:58:24,122 | INFO     | intersect: -63955712880.38918
[2025-05-16 18:03:20] 2025-05-16 21:58:24,122 | INFO     | chi2: 4.511497150379815
[2025-05-16 18:03:20] 2025-05-16 21:58:24,122 | INFO     | current chi2=4.511497150379815 (change=45.828680462757546 %)
[2025-05-16 18:03:20] 2025-05-16 21:58:24,132 | INFO     | sum of square deviations: 2027494549.09091
[2025-05-16 18:03:20] 2025-05-16 21:58:24,132 | INFO     | sum of deviations: 44595553376.27279
[2025-05-16 18:03:20] 2025-05-16 21:58:24,132 | INFO     | mean x: 1747426912.2727273
[2025-05-16 18:03:20] 2025-05-16 21:58:24,132 | INFO     | mean y: 2092265.8770053475
[2025-05-16 18:03:20] 2025-05-16 21:58:24,132 | INFO     | -- intersect: -38433261443.13057
[2025-05-16 18:03:20] 2025-05-16 21:58:24,133 | INFO     | intersect: -38433261443.13057
[2025-05-16 18:03:20] 2025-05-16 21:58:24,133 | INFO     | chi2: 2.744473418698746
[2025-05-16 18:03:20] 2025-05-16 21:58:24,133 | INFO     | current chi2=2.744473418698746 (change=39.16712507581449 %)
[2025-05-16 18:03:20] 2025-05-16 21:58:24,133 | INFO     | sum of square deviations: 1869164076.3076866
[2025-05-16 18:03:20] 2025-05-16 21:58:24,133 | INFO     | sum of deviations: 11932075583.6923
[2025-05-16 18:03:20] 2025-05-16 21:58:24,133 | INFO     | mean x: 1747427064.7692308
[2025-05-16 18:03:20] 2025-05-16 21:58:24,134 | INFO     | mean y: 2123724.5164835164
[2025-05-16 18:03:20] 2025-05-16 21:58:24,134 | INFO     | -- intersect: -11152826275.91559
[2025-05-16 18:03:20] 2025-05-16 21:58:24,134 | INFO     | intersect: -11152826275.91559
[2025-05-16 18:03:20] 2025-05-16 21:58:24,134 | INFO     | chi2: 1.2593325361163723
[2025-05-16 18:03:20] 2025-05-16 21:58:24,134 | INFO     | current chi2=1.2593325361163723 (change=54.113873811411615 %)
[2025-05-16 18:03:20] 2025-05-16 21:58:24,134 | INFO     | sum of square deviations: 1719276553.435023
[2025-05-16 18:03:20] 2025-05-16 21:58:24,134 | INFO     | sum of deviations: -2069789907.949153
[2025-05-16 18:03:20] 2025-05-16 21:58:24,135 | INFO     | mean x: 1747427217.2768362
[2025-05-16 18:03:20] 2025-05-16 21:58:24,135 | INFO     | mean y: 2137852.305084746
[2025-05-16 18:03:20] 2025-05-16 21:58:24,135 | INFO     | -- intersect: 2105817572.6904287
[2025-05-16 18:03:20] 2025-05-16 21:58:24,135 | INFO     | intersect: 2105817572.6904287
[2025-05-16 18:03:20] 2025-05-16 21:58:24,135 | INFO     | chi2: 0.9034596173840752
[2025-05-16 18:03:20] 2025-05-16 21:58:24,135 | INFO     | current chi2=0.9034596173840752 (change=28.25885209237631 %)
[2025-05-16 18:03:20] 2025-05-16 21:58:24,135 | INFO     | sum of square deviations: 1577632783.6046557
[2025-05-16 18:03:20] 2025-05-16 21:58:24,144 | INFO     | sum of deviations: -2233065054.767441
[2025-05-16 18:03:20] 2025-05-16 21:58:24,144 | INFO     | mean x: 1747427369.7790697
[2025-05-16 18:03:20] 2025-05-16 21:58:24,144 | INFO     | mean y: 2138014.9534883723
[2025-05-16 18:03:20] 2025-05-16 21:58:24,144 | INFO     | -- intersect: 2475539325.9240065
[2025-05-16 18:03:20] 2025-05-16 21:58:24,144 | INFO     | intersect: 2475539325.9240065
[2025-05-16 18:03:20] 2025-05-16 21:58:24,145 | INFO     | chi2: 0.902279587805475
[2025-05-16 18:03:20] 2025-05-16 21:58:24,145 | INFO     | current chi2=0.902279587805475 (change=0.13061232133616715 %)
[2025-05-16 18:03:20] 2025-05-16 21:58:24,145 | INFO     | left removable region: 50
[2025-05-16 18:03:20] 2025-05-16 21:58:24,145 | INFO     | sum of square deviations: 869092940.3120571
[2025-05-16 18:03:20] 2025-05-16 21:58:24,145 | INFO     | sum of deviations: 5491696060.297873
[2025-05-16 18:03:20] 2025-05-16 21:58:24,145 | INFO     | mean x: 1747427949.248227
[2025-05-16 18:03:20] 2025-05-16 21:58:24,145 | INFO     | mean y: 2151720.1914893617
[2025-05-16 18:03:20] 2025-05-16 21:58:24,145 | INFO     | -- intersect: -11039639944.91536
[2025-05-16 18:03:20] 2025-05-16 21:58:24,145 | INFO     | intersect: -11039639944.91536
[2025-05-16 18:03:20] 2025-05-16 21:58:24,145 | INFO     | chi2: 0.04523973236797866
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | -- intersect: -11039639944.91536
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | current memory leak: 6.32 B/s (using 141 data points, chi2=0.05)
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | ..............................
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | . Timing measurements:
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | . get job = 0 s
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | . initial setup = 6 s
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | . payload setup = 79 s
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | . stage-in = 0 s
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | . payload execution = 12057 s
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | . stage-out = 4 s
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | . log creation = 0 s
[2025-05-16 18:03:20] 2025-05-16 21:58:24,146 | INFO     | ..............................
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | 
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | job summary report
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | --------------------------------------------------
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | PanDA job id: 6651711736
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | task id: 44638099
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | errors: (none)
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | pilot state: finished 
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | transexitcode: 0
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | exeerrorcode: 0
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | exeerrordiag: 
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | exitcode: 0
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | exitmsg: OK
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | cpuconsumptiontime: 28532 s
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | nevents: 400
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | neventsw: 0
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | pid: 3537245
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | pgrp: 3537245
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | corecount: 8
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | event service: False
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | sizes: {0: 2392883, 1: 2393568, 2: 2393767, 13: 2393767, 25: 2393823, 36: 2393851, 47: 2394007, 52: 2394269, 58: 2394297, 12141: 2423295, 12146: 2432236, 12147: 24
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | --------------------------------------------------
[2025-05-16 18:03:20] 2025-05-16 21:58:24,351 | INFO     | 
[2025-05-16 18:03:20] 2025-05-16 21:58:24,352 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-05-16 18:03:20] 2025-05-16 21:58:24,748 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,748 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,748 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | job 6651711736 has completed (purged errors)
[2025-05-16 18:03:20] 2025-05-16 21:58:24,749 | INFO     | overall cleanup function is called
[2025-05-16 18:03:20] 2025-05-16 21:58:25,769 | INFO     | --- collectZombieJob: --- 10, [3537245]
[2025-05-16 18:03:20] 2025-05-16 21:58:25,772 | INFO     | zombie collector waiting for pid 3537245
[2025-05-16 18:03:20] 2025-05-16 21:58:25,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 18:03:20] 2025-05-16 21:58:25,772 | INFO     | collected zombie processes
[2025-05-16 18:03:20] 2025-05-16 21:58:25,772 | INFO     | will attempt to kill all subprocesses of pid=3537245
[2025-05-16 18:03:20] 2025-05-16 21:58:27,853 | INFO     | process IDs to be killed: [3537245] (in reverse order)
[2025-05-16 18:03:20] 2025-05-16 21:58:28,474 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 18:03:20] 2025-05-16 21:58:28,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 18:03:20] 2025-05-16 21:58:28,842 | INFO     | did not find any defunct processes belonging to 3537245
[2025-05-16 18:03:20] 2025-05-16 21:58:29,037 | INFO     | did not find any defunct processes belonging to 3537245
[2025-05-16 18:03:20] 2025-05-16 21:58:29,037 | INFO     | ready for new job
[2025-05-16 18:03:20] 2025-05-16 21:58:29,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 18:03:20] 2025-05-16 21:58:29,038 | INFO     | **************************************
[2025-05-16 18:03:20] 2025-05-16 21:58:29,038 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 18:03:20] 2025-05-16 21:58:29,038 | INFO     | **************************************
[2025-05-16 18:03:20] 2025-05-16 21:58:29,038 | INFO     | 
[2025-05-16 18:03:20] 2025-05-16 21:58:29,043 | INFO     | architecture information:
[2025-05-16 18:03:20] 2025-05-16 21:58:29,054 | INFO     | executing command: cat /etc/os-release
[2025-05-16 18:03:20] 2025-05-16 21:58:29,179 | INFO     | cat /etc/os-release:
[2025-05-16 18:03:20] NAME="CentOS Linux"
[2025-05-16 18:03:20] VERSION="7 (Core)"
[2025-05-16 18:03:20] ID="centos"
[2025-05-16 18:03:20] ID_LIKE="rhel fedora"
[2025-05-16 18:03:20] VERSION_ID="7"
[2025-05-16 18:03:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 18:03:20] ANSI_COLOR="0;31"
[2025-05-16 18:03:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 18:03:20] HOME_URL="https://www.centos.org/"
[2025-05-16 18:03:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 18:03:20] 
[2025-05-16 18:03:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 18:03:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 18:03:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 18:03:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 18:03:20] 
[2025-05-16 18:03:20] 2025-05-16 21:58:29,179 | INFO     | **************************************
[2025-05-16 18:03:20] 2025-05-16 21:58:29,717 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-05-16 18:03:20] 2025-05-16 21:58:29,977 | INFO     | sufficient remaining disk space (167629553664 B)
[2025-05-16 18:03:20] 2025-05-16 21:58:29,977 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 18:03:20] 2025-05-16 21:58:29,977 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 18:03:20] 2025-05-16 21:58:29,977 | INFO     | update_server=False
[2025-05-16 18:03:20] 2025-05-16 21:58:29,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 18:03:20] 2025-05-16 21:58:29,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 18:03:20] 2025-05-16 21:58:29,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 18:03:20] 2025-05-16 21:58:30,055 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-16 18:03:20] 2025-05-16 21:58:30,056 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-16 18:03:20] 2025-05-16 21:58:30,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 18:03:20] 2025-05-16 21:58:30,056 | INFO     | will abort loop
[2025-05-16 18:03:20] 2025-05-16 21:58:30,175 | INFO     | all payload control threads have been joined
[2025-05-16 18:03:20] 2025-05-16 21:58:30,485 | INFO     | all job control threads have been joined
[2025-05-16 18:03:20] 2025-05-16 21:58:30,993 | INFO     | [job] retrieve thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:31,005 | INFO     | [job] queue monitor thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:31,064 | INFO     | [job] job monitor thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:31,064 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:31,205 | INFO     | [payload] control thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:31,210 | INFO     | all data control threads have been joined
[2025-05-16 18:03:20] 2025-05-16 21:58:31,358 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:31,496 | INFO     | [job] control thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:31,757 | INFO     | [payload] failed_post thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:31,827 | INFO     | PID=3390055 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-16 18:03:20] 2025-05-16 21:58:31,828 | INFO     | .. there are 66 such processes running
[2025-05-16 18:03:20] 2025-05-16 21:58:31,828 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 18:03:20] 2025-05-16 21:58:31,828 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 18:03:20] 2025-05-16 21:58:31,828 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 18:03:20] 2025-05-16 21:58:31,841 | INFO     | [job] validate thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:32,008 | INFO     | [data] copytool_out thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:32,217 | INFO     | [data] control thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:32,460 | INFO     | [payload] validate_post thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:32,474 | INFO     | [data] copytool_in thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:32,474 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:32,484 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:33,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 18:03:20] 2025-05-16 21:58:37,219 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 18:03:20] 2025-05-16 21:58:38,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139625455413056)>', '<ExcThread(monitor, started 139624823387904)>']
[2025-05-16 18:03:20] 2025-05-16 21:58:38,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 18:03:20] 2025-05-16 21:58:38,899 | INFO     | [monitor] control thread has ended
[2025-05-16 18:03:20] 2025-05-16 21:58:43,245 | INFO     | all workflow threads have been joined
[2025-05-16 18:03:20] 2025-05-16 21:58:43,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 18:03:20] 2025-05-16 21:58:43,246 | INFO     | traces error code: 0
[2025-05-16 18:03:20] 2025-05-16 21:58:43,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 18:03:20] 2025-05-16 21:58:43,493 [wrapper] ==== pilot stdout END ====
[2025-05-16 18:03:20] 2025-05-16 21:58:43,560 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 18:03:20] 2025-05-16 21:58:43,601 [wrapper] pilotpid: 3390055
[2025-05-16 18:03:20] 2025-05-16 21:58:43,681 [wrapper] Pilot exit status: 0
[2025-05-16 18:03:20] 2025-05-16 21:58:43,818 [wrapper] pandaids: 6651711736
[2025-05-16 18:03:20] 2025-05-16 21:58:44,150 [wrapper] cleanup supervisor_pilot 1729279 3390056
[2025-05-16 18:03:20] 2025-05-16 21:58:44,166 [wrapper] Test setup, not cleaning
[2025-05-16 18:03:20] 2025-05-16 21:58:44,215 [wrapper] apfmon messages muted
[2025-05-16 18:03:20] 2025-05-16 21:58:44,284 [wrapper] ==== wrapper stdout END ====
[2025-05-16 18:03:20] 2025-05-16 21:58:44,339 [wrapper] ==== wrapper stderr END ====
[2025-05-16 18:03:20]  *** Error codes and diagnostics ***
[2025-05-16 18:03:20]     "exeErrorCode": 0,
[2025-05-16 18:03:20]     "exeErrorDiag": "",
[2025-05-16 18:03:20]     "pilotErrorCode": 0,
[2025-05-16 18:03:20]     "pilotErrorDiag": "",
[2025-05-16 18:03:20]  *** Listing of results directory ***
[2025-05-16 18:03:20] total 414724
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas    495897 May 16 08:35 pilot3.tar.gz
[2025-05-16 18:03:20] -rwx------. 1 boincer umatlas     37140 May 16 08:37 runpilot2-wrapper.sh
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas      5111 May 16 08:37 queuedata.json
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas       100 May 16 14:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 18:03:20] -rwxr-xr-x. 1 boincer umatlas      7986 May 16 14:31 run_atlas
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas       105 May 16 14:31 job.xml
[2025-05-16 18:03:20] -rw-r--r--. 2 boincer umatlas 222323663 May 16 14:31 EVNT.44638096._000771.pool.root.1
[2025-05-16 18:03:20] -rw-r--r--. 2 boincer umatlas     17569 May 16 14:31 start_atlas.sh
[2025-05-16 18:03:20] drwxrwx--x. 2 boincer umatlas      4096 May 16 14:31 shared
[2025-05-16 18:03:20] -rw-r--r--. 2 boincer umatlas    508872 May 16 14:31 input.tar.gz
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas         0 May 16 14:31 boinc_lockfile
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas      2539 May 16 14:31 pandaJob.out
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas       467 May 16 14:31 setup.sh.local
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas    994635 May 16 14:32 agis_schedconf.cvmfs.json
[2025-05-16 18:03:20] drwx------. 4 boincer umatlas      4096 May 16 14:32 pilot3
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas 196027270 May 16 17:56 HITS.44638099._040070.pool.root.1
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas       529 May 16 17:56 boinc_task_state.xml
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas      1037 May 16 17:57 memory_monitor_summary.json
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas   1596741 May 16 17:57 agis_ddmendpoints.agis.ALL.json
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas    355803 May 16 17:57 log.44638099._040070.job.log.tgz.1
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas        95 May 16 17:58 pilot_heartbeat.json
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas      7691 May 16 17:58 heartbeat.json
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas      4935 May 16 17:58 pilotlog.txt
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas    880864 May 16 17:58 log.44638099._040070.job.log.1
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas       357 May 16 17:58 output.list
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas       620 May 16 17:58 runtime_log
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas   1259520 May 16 17:58 result.tar.gz
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas       653 May 16 17:58 YGNMDmlU9Z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ0LKDm3v0QJo.diag
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas     11409 May 16 17:58 runtime_log.err
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas      7158 May 16 18:02 init_data.xml
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas      8192 May 16 18:03 boinc_mmap_file
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas        26 May 16 18:03 wrapper_checkpoint.txt
[2025-05-16 18:03:20] -rw-r--r--. 1 boincer umatlas     21044 May 16 18:03 stderr.txt
[2025-05-16 18:03:20] HITS file was successfully produced:
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas 196027270 May 16 17:56 shared/HITS.pool.root.1
[2025-05-16 18:03:20]  *** Contents of shared directory: ***
[2025-05-16 18:03:20] total 410312
[2025-05-16 18:03:20] -rw-r--r--. 2 boincer umatlas 222323663 May 16 14:31 ATLAS.root_0
[2025-05-16 18:03:20] -rw-r--r--. 2 boincer umatlas     17569 May 16 14:31 start_atlas.sh
[2025-05-16 18:03:20] -rw-r--r--. 2 boincer umatlas    508872 May 16 14:31 input.tar.gz
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas 196027270 May 16 17:56 HITS.pool.root.1
[2025-05-16 18:03:20] -rw-------. 1 boincer umatlas   1259520 May 16 17:58 result.tar.gz
18:03:22 (3345878): run_atlas exited; CPU time 28976.044907
18:03:22 (3345878): called boinc_finish(0)

</stderr_txt>
]]>

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