Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:00:28 (17706): wrapper (7.7.26015): starting
07:00:28 (17706): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 07:00:28] Arguments: --nthreads 8
[2025-05-17 07:00:28] Threads: 8
[2025-05-17 07:00:28] Checking for CVMFS
[2025-05-17 07:00:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 07:00:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 07:00:29] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 07:00:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 07:00:30] 2.11.2.0 14339 7022 92444 146089 3 59 20896014 25165825 4677 130560 0 6915311 99.736 7369128 4250 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-17 07:00:30] CVMFS is ok
[2025-05-17 07:00:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 07:00:30] Checking for apptainer binary...
[2025-05-17 07:00:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 07:00:30] Running /usr/bin/apptainer --version
[2025-05-17 07:00:31] apptainer version 1.3.2-1.el7
[2025-05-17 07:00:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 07:27:53] cg-vwn496.simple-grid.lan
[2025-05-17 07:27:53] apptainer works
[2025-05-17 07:27:53] Set ATHENA_PROC_NUMBER=8
[2025-05-17 07:27:53] Set ATHENA_CORE_NUMBER=8
[2025-05-17 07:27:53] Starting ATLAS job with PandaID=6651711700
[2025-05-17 07:27:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 12:37:09]  *** The last 200 lines of the pilot log: ***
[2025-05-17 12:37:09] 2025-05-17 10:19:20,814 | INFO     | intersect: -13514814611.33164
[2025-05-17 12:37:09] 2025-05-17 10:19:20,814 | INFO     | chi2: 5.4233967725066385
[2025-05-17 12:37:09] 2025-05-17 10:19:20,815 | INFO     | sum of square deviations: 6734191380.0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,817 | INFO     | sum of deviations: 73003555417.00021
[2025-05-17 12:37:09] 2025-05-17 10:19:20,817 | INFO     | mean x: 1747468229.0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,818 | INFO     | mean y: 2481954.663082437
[2025-05-17 12:37:09] 2025-05-17 10:19:20,818 | INFO     | -- intersect: -18941350570.51958
[2025-05-17 12:37:09] 2025-05-17 10:19:20,818 | INFO     | intersect: -18941350570.51958
[2025-05-17 12:37:09] 2025-05-17 10:19:20,818 | INFO     | chi2: 4.6813926238024735
[2025-05-17 12:37:09] 2025-05-17 10:19:20,818 | INFO     | current chi2=4.6813926238024735 (change=13.681539076500545 %)
[2025-05-17 12:37:09] 2025-05-17 10:19:20,818 | INFO     | right removable region: 278
[2025-05-17 12:37:09] 2025-05-17 10:19:20,819 | INFO     | sum of square deviations: 6734191380.0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,821 | INFO     | sum of deviations: -17249658141.0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,822 | INFO     | mean x: 1747468534.0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,822 | INFO     | mean y: 2504393.329749104
[2025-05-17 12:37:09] 2025-05-17 10:19:20,822 | INFO     | -- intersect: 4478652028.987594
[2025-05-17 12:37:09] 2025-05-17 10:19:20,822 | INFO     | intersect: 4478652028.987594
[2025-05-17 12:37:09] 2025-05-17 10:19:20,822 | INFO     | chi2: 2.7562928518730163
[2025-05-17 12:37:09] 2025-05-17 10:19:20,823 | INFO     | current chi2=2.7562928518730163 (change=49.17773920127393 %)
[2025-05-17 12:37:09] 2025-05-17 10:19:20,823 | INFO     | sum of square deviations: 6378584712.5
[2025-05-17 12:37:09] 2025-05-17 10:19:20,826 | INFO     | sum of deviations: -70008991973.0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,826 | INFO     | mean x: 1747468686.5
[2025-05-17 12:37:09] 2025-05-17 10:19:20,826 | INFO     | mean y: 2527019.686131387
[2025-05-17 12:37:09] 2025-05-17 10:19:20,826 | INFO     | -- intersect: 19182098470.152676
[2025-05-17 12:37:09] 2025-05-17 10:19:20,826 | INFO     | intersect: 19182098470.152676
[2025-05-17 12:37:09] 2025-05-17 10:19:20,827 | INFO     | chi2: 1.4044728125658907
[2025-05-17 12:37:09] 2025-05-17 10:19:20,827 | INFO     | current chi2=1.4044728125658907 (change=49.04486250031477 %)
[2025-05-17 12:37:09] 2025-05-17 10:19:20,827 | INFO     | sum of square deviations: 6035722470.0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,829 | INFO     | sum of deviations: -89910111433.0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,830 | INFO     | mean x: 1747468839.0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,830 | INFO     | mean y: 2535799.185873606
[2025-05-17 12:37:09] 2025-05-17 10:19:20,830 | INFO     | -- intersect: 26033407632.858032
[2025-05-17 12:37:09] 2025-05-17 10:19:20,830 | INFO     | intersect: 26033407632.858032
[2025-05-17 12:37:09] 2025-05-17 10:19:20,831 | INFO     | chi2: 1.039033938015498
[2025-05-17 12:37:09] 2025-05-17 10:19:20,831 | INFO     | current chi2=1.039033938015498 (change=26.019647463503194 %)
[2025-05-17 12:37:09] 2025-05-17 10:19:20,831 | INFO     | sum of square deviations: 5705372090.0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,833 | INFO     | sum of deviations: -82770363139.0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,834 | INFO     | mean x: 1747468991.5
[2025-05-17 12:37:09] 2025-05-17 10:19:20,834 | INFO     | mean y: 2532499.378787879
[2025-05-17 12:37:09] 2025-05-17 10:19:20,834 | INFO     | -- intersect: 25353840129.97315
[2025-05-17 12:37:09] 2025-05-17 10:19:20,834 | INFO     | intersect: 25353840129.97315
[2025-05-17 12:37:09] 2025-05-17 10:19:20,834 | INFO     | chi2: 1.0353937084116267
[2025-05-17 12:37:09] 2025-05-17 10:19:20,835 | INFO     | current chi2=1.0353937084116267 (change=0.3503475171199884 %)
[2025-05-17 12:37:09] 2025-05-17 10:19:20,835 | INFO     | left removable region: 40
[2025-05-17 12:37:09] 2025-05-17 10:19:20,835 | INFO     | sum of square deviations: 4180243959.5
[2025-05-17 12:37:09] 2025-05-17 10:19:20,837 | INFO     | sum of deviations: -28181722602.5
[2025-05-17 12:37:09] 2025-05-17 10:19:20,837 | INFO     | mean x: 1747469418.5
[2025-05-17 12:37:09] 2025-05-17 10:19:20,837 | INFO     | mean y: 2522826.5840336136
[2025-05-17 12:37:09] 2025-05-17 10:19:20,837 | INFO     | -- intersect: 11783342052.840242
[2025-05-17 12:37:09] 2025-05-17 10:19:20,837 | INFO     | intersect: 11783342052.840242
[2025-05-17 12:37:09] 2025-05-17 10:19:20,838 | INFO     | chi2: 0.1711677821953964
[2025-05-17 12:37:09] 2025-05-17 10:19:20,838 | INFO     | -- intersect: 11783342052.840242
[2025-05-17 12:37:09] 2025-05-17 10:19:20,838 | INFO     | current memory leak: -6.74 B/s (using 238 data points, chi2=0.17)
[2025-05-17 12:37:09] 2025-05-17 10:19:20,839 | INFO     | ..............................
[2025-05-17 12:37:09] 2025-05-17 10:19:20,839 | INFO     | . Timing measurements:
[2025-05-17 12:37:09] 2025-05-17 10:19:20,839 | INFO     | . get job = 0 s
[2025-05-17 12:37:09] 2025-05-17 10:19:20,839 | INFO     | . initial setup = 2 s
[2025-05-17 12:37:09] 2025-05-17 10:19:20,839 | INFO     | . payload setup = 10 s
[2025-05-17 12:37:09] 2025-05-17 10:19:20,839 | INFO     | . stage-in = 0 s
[2025-05-17 12:37:09] 2025-05-17 10:19:20,840 | INFO     | . payload execution = 17330 s
[2025-05-17 12:37:09] 2025-05-17 10:19:20,840 | INFO     | . stage-out = 2 s
[2025-05-17 12:37:09] 2025-05-17 10:19:20,840 | INFO     | . log creation = 0 s
[2025-05-17 12:37:09] 2025-05-17 10:19:20,840 | INFO     | ..............................
[2025-05-17 12:37:09] 2025-05-17 10:19:20,969 | INFO     | 
[2025-05-17 12:37:09] 2025-05-17 10:19:20,969 | INFO     | job summary report
[2025-05-17 12:37:09] 2025-05-17 10:19:20,969 | INFO     | --------------------------------------------------
[2025-05-17 12:37:09] 2025-05-17 10:19:20,969 | INFO     | PanDA job id: 6651711700
[2025-05-17 12:37:09] 2025-05-17 10:19:20,969 | INFO     | task id: 44638099
[2025-05-17 12:37:09] 2025-05-17 10:19:20,969 | INFO     | errors: (none)
[2025-05-17 12:37:09] 2025-05-17 10:19:20,969 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 12:37:09] 2025-05-17 10:19:20,969 | INFO     | pilot state: finished 
[2025-05-17 12:37:09] 2025-05-17 10:19:20,969 | INFO     | transexitcode: 0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | exeerrorcode: 0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | exeerrordiag: 
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | exitcode: 0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | exitmsg: OK
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | cpuconsumptiontime: 63388 s
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | nevents: 400
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | neventsw: 0
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | pid: 8702
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | pgrp: 8702
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | corecount: 8
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | event service: False
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | sizes: {0: 2393541, 1: 2393740, 9: 2393946, 12: 2393974, 17345: 2425313, 17348: 2434440, 17442: 2434384}
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | --------------------------------------------------
[2025-05-17 12:37:09] 2025-05-17 10:19:20,970 | INFO     | 
[2025-05-17 12:37:09] 2025-05-17 10:19:20,971 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-05-17 12:37:09] 2025-05-17 10:19:21,369 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,370 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,370 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,370 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,370 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,371 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,371 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,371 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 12:37:09] 2025-05-17 10:19:21,371 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,371 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 12:37:09] 2025-05-17 10:19:21,371 | INFO     | job 6651711700 has completed (purged errors)
[2025-05-17 12:37:09] 2025-05-17 10:19:21,371 | INFO     | overall cleanup function is called
[2025-05-17 12:37:09] 2025-05-17 10:19:22,380 | INFO     | --- collectZombieJob: --- 10, [8702]
[2025-05-17 12:37:09] 2025-05-17 10:19:22,380 | INFO     | zombie collector waiting for pid 8702
[2025-05-17 12:37:09] 2025-05-17 10:19:22,380 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 12:37:09] 2025-05-17 10:19:22,380 | INFO     | collected zombie processes
[2025-05-17 12:37:09] 2025-05-17 10:19:22,380 | INFO     | will attempt to kill all subprocesses of pid=8702
[2025-05-17 12:37:09] 2025-05-17 10:19:22,505 | INFO     | process IDs to be killed: [8702] (in reverse order)
[2025-05-17 12:37:09] 2025-05-17 10:19:22,661 | INFO     | PID=32579 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-17 12:37:09] 2025-05-17 10:19:22,664 | INFO     | .. there are 9 such processes running
[2025-05-17 12:37:09] 2025-05-17 10:19:23,178 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 12:37:09] 2025-05-17 10:19:23,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 12:37:09] 2025-05-17 10:19:23,181 | INFO     | did not find any defunct processes belonging to 8702
[2025-05-17 12:37:09] 2025-05-17 10:19:23,184 | INFO     | did not find any defunct processes belonging to 8702
[2025-05-17 12:37:09] 2025-05-17 10:19:23,184 | INFO     | ready for new job
[2025-05-17 12:37:09] 2025-05-17 10:19:23,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 12:37:09] 2025-05-17 10:19:23,186 | INFO     | **************************************
[2025-05-17 12:37:09] 2025-05-17 10:19:23,186 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 12:37:09] 2025-05-17 10:19:23,187 | INFO     | **************************************
[2025-05-17 12:37:09] 2025-05-17 10:19:23,187 | INFO     | 
[2025-05-17 12:37:09] 2025-05-17 10:19:23,187 | INFO     | pilot is running in a VM
[2025-05-17 12:37:09] 2025-05-17 10:19:23,187 | INFO     | architecture information:
[2025-05-17 12:37:09] 2025-05-17 10:19:23,188 | INFO     | executing command: cat /etc/os-release
[2025-05-17 12:37:09] 2025-05-17 10:19:23,342 | INFO     | cat /etc/os-release:
[2025-05-17 12:37:09] NAME="CentOS Linux"
[2025-05-17 12:37:09] VERSION="7 (Core)"
[2025-05-17 12:37:09] ID="centos"
[2025-05-17 12:37:09] ID_LIKE="rhel fedora"
[2025-05-17 12:37:09] VERSION_ID="7"
[2025-05-17 12:37:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 12:37:09] ANSI_COLOR="0;31"
[2025-05-17 12:37:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 12:37:09] HOME_URL="https://www.centos.org/"
[2025-05-17 12:37:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 12:37:09] 
[2025-05-17 12:37:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 12:37:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 12:37:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 12:37:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 12:37:09] 
[2025-05-17 12:37:09] 2025-05-17 10:19:23,342 | INFO     | **************************************
[2025-05-17 12:37:09] 2025-05-17 10:19:23,849 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-05-17 12:37:09] 2025-05-17 10:19:23,993 | INFO     | sufficient remaining disk space (497495834624 B)
[2025-05-17 12:37:09] 2025-05-17 10:19:23,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 12:37:09] 2025-05-17 10:19:23,994 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 12:37:09] 2025-05-17 10:19:23,994 | INFO     | update_server=False
[2025-05-17 12:37:09] 2025-05-17 10:19:23,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 12:37:09] 2025-05-17 10:19:23,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 12:37:09] 2025-05-17 10:19:24,119 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-17 12:37:09] 2025-05-17 10:19:24,119 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-17 12:37:09] 2025-05-17 10:19:24,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 12:37:09] 2025-05-17 10:19:24,119 | INFO     | will abort loop
[2025-05-17 12:37:09] 2025-05-17 10:19:24,655 | INFO     | all job control threads have been joined
[2025-05-17 12:37:09] 2025-05-17 10:19:24,671 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 12:37:09] 2025-05-17 10:19:24,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 12:37:09] 2025-05-17 10:19:24,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 12:37:09] 2025-05-17 10:19:24,826 | INFO     | all data control threads have been joined
[2025-05-17 12:37:09] 2025-05-17 10:19:25,000 | INFO     | [job] retrieve thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:25,125 | INFO     | [job] job monitor thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:25,142 | INFO     | all payload control threads have been joined
[2025-05-17 12:37:09] 2025-05-17 10:19:25,336 | INFO     | [payload] validate_post thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:25,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 12:37:09] 2025-05-17 10:19:25,461 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:25,513 | INFO     | [data] copytool_in thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:25,661 | INFO     | [job] control thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:25,744 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:25,832 | INFO     | [data] control thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:25,923 | INFO     | [job] validate thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:25,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 12:37:09] 2025-05-17 10:19:25,991 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:26,148 | INFO     | [payload] control thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:26,457 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:26,603 | INFO     | [payload] failed_post thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:26,982 | INFO     | [job] queue monitor thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:27,352 | INFO     | [data] copytool_out thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:28,004 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 12:37:09] 2025-05-17 10:19:29,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153823995712)>', '<ExcThread(monitor, started 140153154688768)>']
[2025-05-17 12:37:09] 2025-05-17 10:19:29,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 12:37:09] 2025-05-17 10:19:29,701 | INFO     | [monitor] control thread has ended
[2025-05-17 12:37:09] 2025-05-17 10:19:34,385 | INFO     | all workflow threads have been joined
[2025-05-17 12:37:09] 2025-05-17 10:19:34,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 12:37:09] 2025-05-17 10:19:34,385 | INFO     | traces error code: 0
[2025-05-17 12:37:09] 2025-05-17 10:19:34,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 12:37:09] 2025-05-17 10:19:34,712 [wrapper] ==== pilot stdout END ====
[2025-05-17 12:37:09] 2025-05-17 10:19:34,821 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 12:37:09] 2025-05-17 10:19:34,905 [wrapper] pilotpid: 32579
[2025-05-17 12:37:09] 2025-05-17 10:19:34,986 [wrapper] Pilot exit status: 0
[2025-05-17 12:37:09] 2025-05-17 10:19:35,368 [wrapper] pandaids: 6651711700
[2025-05-17 12:37:09] 2025-05-17 10:19:36,248 [wrapper] cleanup supervisor_pilot  7462 32580
[2025-05-17 12:37:09] 2025-05-17 10:19:36,347 [wrapper] Test setup, not cleaning
[2025-05-17 12:37:09] 2025-05-17 10:19:36,473 [wrapper] apfmon messages muted
[2025-05-17 12:37:09] 2025-05-17 10:19:36,528 [wrapper] ==== wrapper stdout END ====
[2025-05-17 12:37:09] 2025-05-17 10:19:36,629 [wrapper] ==== wrapper stderr END ====
[2025-05-17 12:37:09]  *** Error codes and diagnostics ***
[2025-05-17 12:37:09]     "exeErrorCode": 0,
[2025-05-17 12:37:09]     "exeErrorDiag": "",
[2025-05-17 12:37:09]     "pilotErrorCode": 0,
[2025-05-17 12:37:09]     "pilotErrorDiag": "",
[2025-05-17 12:37:09]  *** Listing of results directory ***
[2025-05-17 12:37:09] total 408968
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc    495897 May 16 14:29 pilot3.tar.gz
[2025-05-17 12:37:09] -rwx------. 1 boinc boinc     37140 May 16 14:31 runpilot2-wrapper.sh
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc      5111 May 16 14:31 queuedata.json
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc       100 May 17 07:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 12:37:09] -rwxr-xr-x. 1 boinc boinc      7986 May 17 07:00 run_atlas
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc       105 May 17 07:00 job.xml
[2025-05-17 12:37:09] -rw-r--r--. 2 boinc boinc 219075519 May 17 07:00 EVNT.44638096._000769.pool.root.1
[2025-05-17 12:37:09] -rw-r--r--. 2 boinc boinc     17569 May 17 07:00 start_atlas.sh
[2025-05-17 12:37:09] drwxrwx--x. 2 boinc boinc        68 May 17 07:00 shared
[2025-05-17 12:37:09] -rw-r--r--. 2 boinc boinc    508872 May 17 07:00 input.tar.gz
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc      6373 May 17 07:00 init_data.xml
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc         0 May 17 07:00 boinc_lockfile
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc      2539 May 17 07:27 pandaJob.out
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc       424 May 17 07:27 setup.sh.local
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc    994643 May 17 07:28 agis_schedconf.cvmfs.json
[2025-05-17 12:37:09] drwx------. 4 boinc boinc      4096 May 17 07:28 pilot3
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc 192002256 May 17 12:16 HITS.44638099._040034.pool.root.1
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc       531 May 17 12:16 boinc_task_state.xml
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc      1020 May 17 12:17 memory_monitor_summary.json
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc   1596741 May 17 12:17 agis_ddmendpoints.agis.ALL.json
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc    425228 May 17 12:17 log.44638099._040034.job.log.tgz.1
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc        96 May 17 12:18 pilot_heartbeat.json
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc      7695 May 17 12:19 heartbeat.json
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc      4603 May 17 12:19 pilotlog.txt
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc   1512335 May 17 12:19 log.44638099._040034.job.log.1
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc       357 May 17 12:19 output.list
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc       620 May 17 12:19 runtime_log
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc   1955840 May 17 12:19 result.tar.gz
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc     11031 May 17 12:19 runtime_log.err
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc       657 May 17 12:19 9iZMDmtO9Z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmB2IKDmWI95qm.diag
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc      8192 May 17 12:37 boinc_mmap_file
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc        28 May 17 12:37 wrapper_checkpoint.txt
[2025-05-17 12:37:09] -rw-r--r--. 1 boinc boinc     20537 May 17 12:37 stderr.txt
[2025-05-17 12:37:09] HITS file was successfully produced:
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc 192002256 May 17 12:16 shared/HITS.pool.root.1
[2025-05-17 12:37:09]  *** Contents of shared directory: ***
[2025-05-17 12:37:09] total 403880
[2025-05-17 12:37:09] -rw-r--r--. 2 boinc boinc 219075519 May 17 07:00 ATLAS.root_0
[2025-05-17 12:37:09] -rw-r--r--. 2 boinc boinc     17569 May 17 07:00 start_atlas.sh
[2025-05-17 12:37:09] -rw-r--r--. 2 boinc boinc    508872 May 17 07:00 input.tar.gz
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc 192002256 May 17 12:16 HITS.pool.root.1
[2025-05-17 12:37:09] -rw-------. 1 boinc boinc   1955840 May 17 12:19 result.tar.gz
12:37:11 (17706): run_atlas exited; CPU time 63597.669047
12:37:11 (17706): called boinc_finish(0)

</stderr_txt>
]]>

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