Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:11:39 (1866302): wrapper (7.7.26015): starting
14:11:39 (1866302): wrapper: running run_atlas (--nthreads 8)
[2025-05-16 14:11:39] Arguments: --nthreads 8
[2025-05-16 14:11:39] Threads: 8
[2025-05-16 14:11:39] Checking for CVMFS
[2025-05-16 14:11:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 14:11:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 14:11:39] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 14:11:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 14:11:40] 2.12.6.0 61263 4315 287884 146073 3 551 25947675 40960000 44646 16776704 1 67132931 99.776 49215738 25628 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-16 14:11:40] CVMFS is ok
[2025-05-16 14:11:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 14:11:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 14:11:40] Further information can be found at the LHC@home message board.
[2025-05-16 14:11:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 14:11:40] Checking for apptainer binary...
[2025-05-16 14:11:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 14:11:40] Running /usr/bin/apptainer --version
[2025-05-16 14:11:40] apptainer version 1.4.0-1.el9
[2025-05-16 14:11:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 14:11:40] c8-7-5.aglt2.org
[2025-05-16 14:11:40] apptainer works
[2025-05-16 14:11:40] Set ATHENA_PROC_NUMBER=8
[2025-05-16 14:11:40] Set ATHENA_CORE_NUMBER=8
[2025-05-16 14:11:41] Starting ATLAS job with PandaID=6651639228
[2025-05-16 14:11:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 16:02:36]  *** The last 200 lines of the pilot log: ***
[2025-05-16 16:02:36] 2025-05-16 20:02:19,850 | INFO     | -- intersect: -260381346022.87976
[2025-05-16 16:02:36] 2025-05-16 20:02:19,850 | INFO     | intersect: -260381346022.87976
[2025-05-16 16:02:36] 2025-05-16 20:02:19,850 | INFO     | chi2: 4.961822460815679
[2025-05-16 16:02:36] 2025-05-16 20:02:19,850 | INFO     | current chi2=4.961822460815679 (change=1.8738204764065916 %)
[2025-05-16 16:02:36] 2025-05-16 20:02:19,850 | INFO     | right removable region: 100
[2025-05-16 16:02:36] 2025-05-16 20:02:19,850 | INFO     | sum of square deviations: 319457859.6435638
[2025-05-16 16:02:36] 2025-05-16 20:02:19,851 | INFO     | sum of deviations: 27277579996.168304
[2025-05-16 16:02:36] 2025-05-16 20:02:19,851 | INFO     | mean x: 1747422603.059406
[2025-05-16 16:02:36] 2025-05-16 20:02:19,851 | INFO     | mean y: 2066985.1386138613
[2025-05-16 16:02:36] 2025-05-16 20:02:19,851 | INFO     | -- intersect: -149205280410.3786
[2025-05-16 16:02:36] 2025-05-16 20:02:19,851 | INFO     | intersect: -149205280410.3786
[2025-05-16 16:02:36] 2025-05-16 20:02:19,851 | INFO     | chi2: 2.5151838519604675
[2025-05-16 16:02:36] 2025-05-16 20:02:19,851 | INFO     | current chi2=2.5151838519604675 (change=50.25912673390103 %)
[2025-05-16 16:02:36] 2025-05-16 20:02:19,851 | INFO     | sum of square deviations: 274320299.625
[2025-05-16 16:02:36] 2025-05-16 20:02:19,851 | INFO     | sum of deviations: 12562607749.437496
[2025-05-16 16:02:36] 2025-05-16 20:02:19,851 | INFO     | mean x: 1747422755.5625
[2025-05-16 16:02:36] 2025-05-16 20:02:19,851 | INFO     | mean y: 2116717.6770833335
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | -- intersect: -80021806705.35016
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | intersect: -80021806705.35016
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | chi2: 1.46118139184567
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | current chi2=1.46118139184567 (change=41.905583136328275 %)
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | sum of square deviations: 233647939.6043954
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | sum of deviations: -2260405697.3736267
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | mean x: 1747422908.0659342
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | mean y: 2172247.395604396
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | -- intersect: 16907455913.929268
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | intersect: 16907455913.929268
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | chi2: 0.21200720958579872
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | current chi2=0.21200720958579872 (change=85.49069877505045 %)
[2025-05-16 16:02:36] 2025-05-16 20:02:19,852 | INFO     | sum of square deviations: 197208217.08139488
[2025-05-16 16:02:36] 2025-05-16 20:02:19,853 | INFO     | sum of deviations: -5469114721.581395
[2025-05-16 16:02:36] 2025-05-16 20:02:19,853 | INFO     | mean x: 1747423060.5697675
[2025-05-16 16:02:36] 2025-05-16 20:02:19,853 | INFO     | mean y: 2185161.930232558
[2025-05-16 16:02:36] 2025-05-16 20:02:19,853 | INFO     | -- intersect: 48462930494.101036
[2025-05-16 16:02:36] 2025-05-16 20:02:19,853 | INFO     | intersect: 48462930494.101036
[2025-05-16 16:02:36] 2025-05-16 20:02:19,853 | INFO     | chi2: 0.02939691682616387
[2025-05-16 16:02:36] 2025-05-16 20:02:19,853 | INFO     | current chi2=0.02939691682616387 (change=86.13400134665373 %)
[2025-05-16 16:02:36] 2025-05-16 20:02:19,856 | INFO     | sum of square deviations: 164768569.5555558
[2025-05-16 16:02:36] 2025-05-16 20:02:19,856 | INFO     | sum of deviations: -4862713429.370368
[2025-05-16 16:02:36] 2025-05-16 20:02:19,856 | INFO     | mean x: 1747423213.074074
[2025-05-16 16:02:36] 2025-05-16 20:02:19,856 | INFO     | mean y: 2182378.3950617285
[2025-05-16 16:02:36] 2025-05-16 20:02:19,856 | INFO     | -- intersect: 51572808669.13173
[2025-05-16 16:02:36] 2025-05-16 20:02:19,856 | INFO     | intersect: 51572808669.13173
[2025-05-16 16:02:36] 2025-05-16 20:02:19,856 | INFO     | chi2: 0.026184912118384546
[2025-05-16 16:02:36] 2025-05-16 20:02:19,856 | INFO     | current chi2=0.026184912118384546 (change=10.926331923763417 %)
[2025-05-16 16:02:36] 2025-05-16 20:02:19,856 | INFO     | left removable region: 50
[2025-05-16 16:02:36] 2025-05-16 20:02:19,856 | INFO     | sum of square deviations: 38741012.180000044
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | sum of deviations: -858661385.5
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | mean x: 1747423792.58
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | mean y: 2165463.5
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | -- intersect: 38732318610.27319
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | intersect: 38732318610.27319
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | chi2: 0.0177282882674567
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | -- intersect: 38732318610.27319
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | current memory leak: -22.16 B/s (using 50 data points, chi2=0.02)
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | ..............................
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | . Timing measurements:
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | . get job = 0 s
[2025-05-16 16:02:36] 2025-05-16 20:02:19,857 | INFO     | . initial setup = 4 s
[2025-05-16 16:02:36] 2025-05-16 20:02:19,858 | INFO     | . payload setup = 27 s
[2025-05-16 16:02:36] 2025-05-16 20:02:19,858 | INFO     | . stage-in = 0 s
[2025-05-16 16:02:36] 2025-05-16 20:02:19,858 | INFO     | . payload execution = 6470 s
[2025-05-16 16:02:36] 2025-05-16 20:02:19,858 | INFO     | . stage-out = 2 s
[2025-05-16 16:02:36] 2025-05-16 20:02:19,858 | INFO     | . log creation = 0 s
[2025-05-16 16:02:36] 2025-05-16 20:02:19,858 | INFO     | ..............................
[2025-05-16 16:02:36] 2025-05-16 20:02:19,967 | INFO     | 
[2025-05-16 16:02:36] 2025-05-16 20:02:19,983 | INFO     | job summary report
[2025-05-16 16:02:36] 2025-05-16 20:02:19,987 | INFO     | --------------------------------------------------
[2025-05-16 16:02:36] 2025-05-16 20:02:19,987 | INFO     | PanDA job id: 6651639228
[2025-05-16 16:02:36] 2025-05-16 20:02:19,987 | INFO     | task id: 44638099
[2025-05-16 16:02:36] 2025-05-16 20:02:19,987 | INFO     | errors: (none)
[2025-05-16 16:02:36] 2025-05-16 20:02:19,987 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 16:02:36] 2025-05-16 20:02:19,987 | INFO     | pilot state: finished 
[2025-05-16 16:02:36] 2025-05-16 20:02:19,987 | INFO     | transexitcode: 0
[2025-05-16 16:02:36] 2025-05-16 20:02:19,987 | INFO     | exeerrorcode: 0
[2025-05-16 16:02:36] 2025-05-16 20:02:19,987 | INFO     | exeerrordiag: 
[2025-05-16 16:02:36] 2025-05-16 20:02:19,987 | INFO     | exitcode: 0
[2025-05-16 16:02:36] 2025-05-16 20:02:19,987 | INFO     | exitmsg: OK
[2025-05-16 16:02:36] 2025-05-16 20:02:19,988 | INFO     | cpuconsumptiontime: 27066 s
[2025-05-16 16:02:36] 2025-05-16 20:02:19,988 | INFO     | nevents: 400
[2025-05-16 16:02:36] 2025-05-16 20:02:19,988 | INFO     | neventsw: 0
[2025-05-16 16:02:36] 2025-05-16 20:02:19,988 | INFO     | pid: 1923575
[2025-05-16 16:02:36] 2025-05-16 20:02:19,988 | INFO     | pgrp: 1923575
[2025-05-16 16:02:36] 2025-05-16 20:02:19,988 | INFO     | corecount: 8
[2025-05-16 16:02:36] 2025-05-16 20:02:19,988 | INFO     | event service: False
[2025-05-16 16:02:36] 2025-05-16 20:02:19,988 | INFO     | sizes: {0: 2393540, 1: 2393739, 11: 2393739, 22: 2394001, 33: 2394001, 6502: 2421035, 6504: 2429976, 6508: 2430032, 6540: 2430202}
[2025-05-16 16:02:36] 2025-05-16 20:02:19,999 | INFO     | --------------------------------------------------
[2025-05-16 16:02:36] 2025-05-16 20:02:19,999 | INFO     | 
[2025-05-16 16:02:36] 2025-05-16 20:02:19,999 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-05-16 16:02:36] 2025-05-16 20:02:20,090 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 16:02:36] 2025-05-16 20:02:20,092 | INFO     | job 6651639228 has completed (purged errors)
[2025-05-16 16:02:36] 2025-05-16 20:02:20,092 | INFO     | overall cleanup function is called
[2025-05-16 16:02:36] 2025-05-16 20:02:20,491 | INFO     | PID=1881283 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-16 16:02:36] 2025-05-16 20:02:20,491 | INFO     | .. there are 55 such processes running
[2025-05-16 16:02:36] 2025-05-16 20:02:21,103 | INFO     | --- collectZombieJob: --- 10, [1923575]
[2025-05-16 16:02:36] 2025-05-16 20:02:21,103 | INFO     | zombie collector waiting for pid 1923575
[2025-05-16 16:02:36] 2025-05-16 20:02:21,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 16:02:36] 2025-05-16 20:02:21,103 | INFO     | collected zombie processes
[2025-05-16 16:02:36] 2025-05-16 20:02:21,103 | INFO     | will attempt to kill all subprocesses of pid=1923575
[2025-05-16 16:02:36] 2025-05-16 20:02:21,934 | INFO     | process IDs to be killed: [1923575] (in reverse order)
[2025-05-16 16:02:36] 2025-05-16 20:02:22,150 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 16:02:36] 2025-05-16 20:02:22,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 16:02:36] 2025-05-16 20:02:22,182 | INFO     | did not find any defunct processes belonging to 1923575
[2025-05-16 16:02:36] 2025-05-16 20:02:22,222 | INFO     | did not find any defunct processes belonging to 1923575
[2025-05-16 16:02:36] 2025-05-16 20:02:22,223 | INFO     | ready for new job
[2025-05-16 16:02:36] 2025-05-16 20:02:22,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 16:02:36] 2025-05-16 20:02:22,227 | INFO     | **************************************
[2025-05-16 16:02:36] 2025-05-16 20:02:22,227 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 16:02:36] 2025-05-16 20:02:22,227 | INFO     | **************************************
[2025-05-16 16:02:36] 2025-05-16 20:02:22,227 | INFO     | 
[2025-05-16 16:02:36] 2025-05-16 20:02:22,249 | INFO     | architecture information:
[2025-05-16 16:02:36] 2025-05-16 20:02:22,253 | INFO     | executing command: cat /etc/os-release
[2025-05-16 16:02:36] 2025-05-16 20:02:22,325 | INFO     | cat /etc/os-release:
[2025-05-16 16:02:36] NAME="CentOS Linux"
[2025-05-16 16:02:36] VERSION="7 (Core)"
[2025-05-16 16:02:36] ID="centos"
[2025-05-16 16:02:36] ID_LIKE="rhel fedora"
[2025-05-16 16:02:36] VERSION_ID="7"
[2025-05-16 16:02:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 16:02:36] ANSI_COLOR="0;31"
[2025-05-16 16:02:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 16:02:36] HOME_URL="https://www.centos.org/"
[2025-05-16 16:02:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 16:02:36] 
[2025-05-16 16:02:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 16:02:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 16:02:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 16:02:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 16:02:36] 
[2025-05-16 16:02:36] 2025-05-16 20:02:22,326 | INFO     | **************************************
[2025-05-16 16:02:36] 2025-05-16 20:02:22,831 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-05-16 16:02:36] 2025-05-16 20:02:22,907 | INFO     | sufficient remaining disk space (169756065792 B)
[2025-05-16 16:02:36] 2025-05-16 20:02:22,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 16:02:36] 2025-05-16 20:02:22,911 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 16:02:36] 2025-05-16 20:02:22,911 | INFO     | update_server=False
[2025-05-16 16:02:36] 2025-05-16 20:02:22,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 16:02:36] 2025-05-16 20:02:22,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 16:02:36] 2025-05-16 20:02:22,913 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-16 16:02:36] 2025-05-16 20:02:22,913 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 16:02:36] 2025-05-16 20:02:22,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 16:02:36] 2025-05-16 20:02:22,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 16:02:36] 2025-05-16 20:02:22,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 16:02:36] 2025-05-16 20:02:22,914 | INFO     | aborting loop
[2025-05-16 16:02:36] 2025-05-16 20:02:23,630 | INFO     | all payload control threads have been joined
[2025-05-16 16:02:36] 2025-05-16 20:02:23,834 | INFO     | all data control threads have been joined
[2025-05-16 16:02:36] 2025-05-16 20:02:23,916 | INFO     | [job] retrieve thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:23,922 | INFO     | [job] job monitor thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:24,117 | INFO     | [data] copytool_in thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:24,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:24,450 | INFO     | all job control threads have been joined
[2025-05-16 16:02:36] 2025-05-16 20:02:24,513 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:24,514 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:24,524 | INFO     | [job] validate thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:24,636 | INFO     | [payload] control thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:24,666 | INFO     | [payload] validate_post thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:24,670 | INFO     | [payload] failed_post thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:24,840 | INFO     | [data] control thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:24,922 | INFO     | [data] copytool_out thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:24,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 16:02:36] 2025-05-16 20:02:25,114 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:25,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 16:02:36] 2025-05-16 20:02:25,456 | INFO     | [job] control thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:25,987 | INFO     | [job] queue monitor thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:29,417 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 16:02:36] 2025-05-16 20:02:30,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139999393417024)>', '<ExcThread(monitor, started 139998217107200)>']
[2025-05-16 16:02:36] 2025-05-16 20:02:30,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 16:02:36] 2025-05-16 20:02:30,959 | INFO     | [monitor] control thread has ended
[2025-05-16 16:02:36] 2025-05-16 20:02:35,637 | INFO     | all workflow threads have been joined
[2025-05-16 16:02:36] 2025-05-16 20:02:35,637 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 16:02:36] 2025-05-16 20:02:35,637 | INFO     | traces error code: 0
[2025-05-16 16:02:36] 2025-05-16 20:02:35,637 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 16:02:36] 2025-05-16 20:02:35,934 [wrapper] ==== pilot stdout END ====
[2025-05-16 16:02:36] 2025-05-16 20:02:35,949 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 16:02:36] 2025-05-16 20:02:35,967 [wrapper] pilotpid: 1881283
[2025-05-16 16:02:36] 2025-05-16 20:02:35,989 [wrapper] Pilot exit status: 0
[2025-05-16 16:02:36] 2025-05-16 20:02:36,100 [wrapper] pandaids: 6651639228
[2025-05-16 16:02:36] 2025-05-16 20:02:36,396 [wrapper] cleanup supervisor_pilot  894044 1881284
[2025-05-16 16:02:36] 2025-05-16 20:02:36,503 [wrapper] Test setup, not cleaning
[2025-05-16 16:02:36] 2025-05-16 20:02:36,517 [wrapper] apfmon messages muted
[2025-05-16 16:02:36] 2025-05-16 20:02:36,541 [wrapper] ==== wrapper stdout END ====
[2025-05-16 16:02:36] 2025-05-16 20:02:36,561 [wrapper] ==== wrapper stderr END ====
[2025-05-16 16:02:36]  *** Error codes and diagnostics ***
[2025-05-16 16:02:36]     "exeErrorCode": 0,
[2025-05-16 16:02:36]     "exeErrorDiag": "",
[2025-05-16 16:02:36]     "pilotErrorCode": 0,
[2025-05-16 16:02:36]     "pilotErrorDiag": "",
[2025-05-16 16:02:36]  *** Listing of results directory ***
[2025-05-16 16:02:36] total 408896
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas    495897 May 16 07:32 pilot3.tar.gz
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas      5111 May 16 07:53 queuedata.json
[2025-05-16 16:02:36] -rwx------. 1 boincer umatlas     37140 May 16 07:54 runpilot2-wrapper.sh
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas       100 May 16 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 16:02:36] -rwxr-xr-x. 1 boincer umatlas      7986 May 16 14:11 run_atlas
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas       105 May 16 14:11 job.xml
[2025-05-16 16:02:36] -rw-r--r--. 2 boincer umatlas 221635671 May 16 14:11 EVNT.44638096._000751.pool.root.1
[2025-05-16 16:02:36] -rw-r--r--. 2 boincer umatlas     17569 May 16 14:11 start_atlas.sh
[2025-05-16 16:02:36] drwxrwx--x. 2 boincer umatlas      4096 May 16 14:11 shared
[2025-05-16 16:02:36] -rw-r--r--. 2 boincer umatlas    508880 May 16 14:11 input.tar.gz
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas         0 May 16 14:11 boinc_lockfile
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas      2539 May 16 14:11 pandaJob.out
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas       467 May 16 14:11 setup.sh.local
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas    994651 May 16 14:12 agis_schedconf.cvmfs.json
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas   1596741 May 16 14:12 agis_ddmendpoints.agis.ALL.json
[2025-05-16 16:02:36] drwx------. 4 boincer umatlas      4096 May 16 14:12 pilot3
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas      7159 May 16 16:00 init_data.xml
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas 191488375 May 16 16:01 HITS.44638099._039573.pool.root.1
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas       529 May 16 16:01 boinc_task_state.xml
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas      1036 May 16 16:01 memory_monitor_summary.json
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas    308751 May 16 16:01 log.44638099._039573.job.log.tgz.1
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas        95 May 16 16:01 pilot_heartbeat.json
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas      7695 May 16 16:02 heartbeat.json
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas        27 May 16 16:02 wrapper_checkpoint.txt
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas      8192 May 16 16:02 boinc_mmap_file
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas      4477 May 16 16:02 pilotlog.txt
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas    559131 May 16 16:02 log.44638099._039573.job.log.1
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas       357 May 16 16:02 output.list
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas       620 May 16 16:02 runtime_log
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas    890880 May 16 16:02 result.tar.gz
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas     11408 May 16 16:02 runtime_log.err
[2025-05-16 16:02:36] -rw-------. 1 boincer umatlas       652 May 16 16:02 dPXNDmqo8Z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmF0IKDmEIY7am.diag
[2025-05-16 16:02:36] -rw-r--r--. 1 boincer umatlas     16448 May 16 16:02 stderr.txt
[2025-05-16 16:02:36] HITS file was successfully produced:
[2025-05-16 16:02:37] -rw-------. 1 boincer umatlas 191488375 May 16 16:01 shared/HITS.pool.root.1
[2025-05-16 16:02:37]  *** Contents of shared directory: ***
[2025-05-16 16:02:37] total 404848
[2025-05-16 16:02:37] -rw-r--r--. 2 boincer umatlas 221635671 May 16 14:11 ATLAS.root_0
[2025-05-16 16:02:37] -rw-r--r--. 2 boincer umatlas     17569 May 16 14:11 start_atlas.sh
[2025-05-16 16:02:37] -rw-r--r--. 2 boincer umatlas    508880 May 16 14:11 input.tar.gz
[2025-05-16 16:02:37] -rw-------. 1 boincer umatlas 191488375 May 16 16:01 HITS.pool.root.1
[2025-05-16 16:02:37] -rw-------. 1 boincer umatlas    890880 May 16 16:02 result.tar.gz
16:02:38 (1866302): run_atlas exited; CPU time 27303.212849
16:02:38 (1866302): called boinc_finish(0)

</stderr_txt>
]]>

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