Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-16 17:50:56 (14024): Detected: vboxwrapper 26206
2025-05-16 17:50:56 (14024): Detected: BOINC client v8.0.2
2025-05-16 17:50:57 (14024): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2025-05-16 17:50:57 (14024): Successfully copied 'init_data.xml' to the shared directory.
2025-05-16 17:50:58 (14024): Create VM. (boinc_61036d430ff925fe, slot#0)
2025-05-16 17:50:58 (14024): Setting Memory Size for VM. (4200MB)
2025-05-16 17:50:59 (14024): Setting CPU Count for VM. (2)
2025-05-16 17:50:59 (14024): Setting Chipset Options for VM.
2025-05-16 17:50:59 (14024): Setting Graphics Controller Options for VM.
2025-05-16 17:50:59 (14024): Setting Boot Options for VM.
2025-05-16 17:51:00 (14024): Setting Network Configuration for NAT.
2025-05-16 17:51:00 (14024): Enabling VM Network Access.
2025-05-16 17:51:00 (14024): Disabling USB Support for VM.
2025-05-16 17:51:01 (14024): Disabling COM Port Support for VM.
2025-05-16 17:51:01 (14024): Disabling LPT Port Support for VM.
2025-05-16 17:51:01 (14024): Disabling Audio Support for VM.
2025-05-16 17:51:01 (14024): Disabling Clipboard Support for VM.
2025-05-16 17:51:02 (14024): Disabling Drag and Drop Support for VM.
2025-05-16 17:51:02 (14024): Adding storage controller(s) to VM.
2025-05-16 17:51:02 (14024): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-16 17:51:05 (14024): Adding VirtualBox Guest Additions to VM.
2025-05-16 17:51:05 (14024): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-16 17:51:06 (14024): forwarding host port 51853 to guest port 80
2025-05-16 17:51:06 (14024): Enabling remote desktop for VM.
2025-05-16 17:51:06 (14024): Required extension pack not installed, remote desktop not enabled.
2025-05-16 17:51:06 (14024): Enabling shared directory for VM.
2025-05-16 17:51:07 (14024): Starting VM using VBoxManage interface. (boinc_61036d430ff925fe, slot#0)
2025-05-16 17:51:12 (14024): Successfully started VM. (PID = '14664')
2025-05-16 17:51:12 (14024): Reporting VM Process ID to BOINC.
2025-05-16 17:51:12 (14024): Guest Log: BIOS: VirtualBox 7.0.18
2025-05-16 17:51:12 (14024): Guest Log: CPUID EDX: 0x178bfbff
2025-05-16 17:51:12 (14024): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-16 17:51:12 (14024): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-16 17:51:12 (14024): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-16 17:51:12 (14024): Detected: Web Application Enabled (http://localhost:51853)
2025-05-16 17:51:12 (14024): Preference change detected
2025-05-16 17:51:12 (14024): Setting CPU throttle for VM. (50%)
2025-05-16 17:51:13 (14024): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-16 17:51:14 (14024): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-16 17:51:14 (14024): Guest Log: BIOS: Booting from Hard Disk...
2025-05-16 17:51:18 (14024): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-16 17:51:18 (14024): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-16 17:51:18 (14024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-16 17:51:26 (14024): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-16 17:51:26 (14024): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-16 17:51:38 (14024): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-16 17:51:38 (14024): Guest Log: 00:00:00.000120 main     Log opened 2025-05-16T17:51:36.504720000Z
2025-05-16 17:51:38 (14024): Guest Log: 00:00:00.000249 main     OS Product: Linux
2025-05-16 17:51:38 (14024): Guest Log: 00:00:00.000286 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-16 17:51:38 (14024): Guest Log: 00:00:00.000317 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-16 17:51:38 (14024): Guest Log: 00:00:00.000349 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-16 17:51:38 (14024): Guest Log: 00:00:00.000350 main     Process ID: 1260
2025-05-16 17:51:38 (14024): Guest Log: 00:00:00.000351 main     Package type: LINUX_64BITS_GENERIC
2025-05-16 17:51:38 (14024): Guest Log: 00:00:00.001644 main     5.2.32 r132073 started. Verbose level = 0
2025-05-16 17:51:38 (14024): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-16 17:51:38 (14024): Guest Log: [INFO] Mounting shared directory
2025-05-16 17:51:38 (14024): Guest Log: [INFO] Checking for init_data.xml
2025-05-16 17:51:48 (14024): Guest Log: 00:00:10.007256 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 032 122 000ns (GuestNow=1 747 414 308 477 207 000 ns GuestLast=1 747 417 896 509 329 000 ns fSetTimeLastLoop=true )
2025-05-16 17:51:52 (14024): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-16 17:51:53 (14024): Guest Log: [INFO] Detected branch: prod
2025-05-16 17:51:53 (14024): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-16 17:51:53 (14024): Guest Log: Copying input files
2025-05-16 17:51:54 (14024): Guest Log: Copied input files into RunAtlas.
2025-05-16 17:51:54 (14024): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-16 17:51:54 (14024): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-16 17:51:54 (14024): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-16 17:51:54 (14024): Guest Log: Further information can be found at the LHC@home message board.
2025-05-16 17:52:04 (14024): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-16 17:52:04 (14024): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-16 17:52:04 (14024): Guest Log: 2.6.3.0 1537 0 30124 146071 4 1 3117515 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-16 17:52:05 (14024): Guest Log: copied the webapp to /var/www
2025-05-16 17:52:05 (14024): Guest Log: ATHENA_PROC_NUMBER=2
2025-05-16 17:52:05 (14024): Guest Log: ATHENA_CORE_NUMBER=2
2025-05-16 17:52:06 (14024): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-16 17:52:06 (14024): Guest Log:  *** Starting ATLAS job. (PandaID=6651742875 taskID=44638099) ***
2025-05-16 18:02:04 (14024): Guest Log:  *** Job finished ***
2025-05-16 18:02:04 (14024): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:01:56,019 | INFO     | [data] copytool_in thread has finished
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:01:57,124 | INFO     | [data] copytool_out thread has finished
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:01:57,581 | INFO     | [data] queue_monitor thread has finished
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:01:58,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757663930176)>', '<ExcThread(monitor, started 139757052995328)>']
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:01:58,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:01:58,587 | INFO     | [monitor] control thread has ended
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:03,567 | INFO     | all workflow threads have been joined
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:03,568 | INFO     | end of generic workflow (traces error code: 0)
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:03,569 | INFO     | traces error code: 0
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:03,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:03,919 [wrapper] ==== pilot stdout END ====
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:03,925 [wrapper] ==== wrapper stdout RESUME ====
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:03,932 [wrapper] pilotpid: 5838
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:03,938 [wrapper] Pilot exit status: 0
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:04,005 [wrapper] pandaids: 6651742875
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:04,039 [wrapper] cleanup supervisor_pilot  5844 5839
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:04,043 [wrapper] Test setup, not cleaning
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:04,050 [wrapper] apfmon messages muted
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:04,054 [wrapper] ==== wrapper stdout END ====
2025-05-16 18:02:04 (14024): Guest Log: 2025-05-16 17:02:04,057 [wrapper] ==== wrapper stderr END ====
2025-05-16 18:02:04 (14024): Guest Log:  *** Error codes and diagnostics ***
2025-05-16 18:02:04 (14024): Guest Log:     "exeErrorCode": 65,
2025-05-16 18:02:04 (14024): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-05-16 18:02:04 (14024): Guest Log:     "pilotErrorCode": 1305,
2025-05-16 18:02:04 (14024): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-05-16 18:02:04 (14024): Guest Log:  *** Listing of results directory ***
2025-05-16 18:02:04 (14024): Guest Log: total 3928
2025-05-16 18:02:04 (14024): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May 16 13:22 pilot3.tar.gz
2025-05-16 18:02:04 (14024): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May 16 13:52 queuedata.json
2025-05-16 18:02:04 (14024): Guest Log: -rwx------. 1 atlas atlas   37140 May 16 13:53 runpilot2-wrapper.sh
2025-05-16 18:02:04 (14024): Guest Log: -rwxr-xr-x. 1 atlas atlas    8226 May 16 16:51 init_data.xml
2025-05-16 18:02:04 (14024): Guest Log: -rwxr-xr-x. 1 atlas atlas  508874 May 16 16:51 input.tar.gz
2025-05-16 18:02:04 (14024): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 May 16 16:51 start_atlas.sh
2025-05-16 18:02:05 (14024): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 16 16:51 EVNT.44638096._000802.pool.root.1 -> /data/./ATLAS.root_0
2025-05-16 18:02:05 (14024): Guest Log: -rw-r--r--. 1 atlas atlas    2538 May 16 16:52 pandaJob.out
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas     424 May 16 16:52 setup.sh.local
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas  994651 May 16 16:52 agis_schedconf.cvmfs.json
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas 1596741 May 16 16:52 agis_ddmendpoints.agis.ALL.json
2025-05-16 18:02:05 (14024): Guest Log: drwx------. 4 atlas atlas    4096 May 16 16:53 pilot3
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas    1005 May 16 16:59 memory_monitor_summary.json
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas   23333 May 16 16:59 log.44638099._040815.job.log.tgz.1
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas    8496 May 16 17:01 heartbeat.json
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas      95 May 16 17:01 pilot_heartbeat.json
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas    4536 May 16 17:02 pilotlog.txt
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas  100455 May 16 17:02 log.44638099._040815.job.log.1
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas     188 May 16 17:02 output.list
2025-05-16 18:02:05 (14024): Guest Log: -rw-r--r--. 1 atlas atlas     620 May 16 17:02 runtime_log
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas  143360 May 16 17:02 result.tar.gz
2025-05-16 18:02:05 (14024): Guest Log: -rw-r--r--. 1 atlas atlas   10791 May 16 17:02 runtime_log.err
2025-05-16 18:02:05 (14024): Guest Log: -rw-------. 1 atlas atlas     643 May 16 17:02 9sFKDmtfAa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX8LKDmXQmWdm.diag
2025-05-16 18:02:05 (14024): Guest Log: Looking for outputfile HITS.44638099._040815.pool.root.1
2025-05-16 18:02:05 (14024): Guest Log: No HITS file was produced
2025-05-16 18:02:05 (14024): Guest Log: Successfully finished the ATLAS job!
2025-05-16 18:02:05 (14024): Guest Log: Copying the results back to the shared directory!
2025-05-16 18:02:05 (14024): Guest Log:  *** Contents of shared directory: ***
2025-05-16 18:02:05 (14024): Guest Log: total 217780
2025-05-16 18:02:05 (14024): Guest Log: -rwxrwxrwx. 1 root root 222315165 May 16 16:50 ATLAS.root_0
2025-05-16 18:02:05 (14024): Guest Log: -rwxrwxrwx. 1 root root      8226 May 16 16:50 init_data.xml
2025-05-16 18:02:05 (14024): Guest Log: -rwxrwxrwx. 1 root root    508874 May 16 16:39 input.tar.gz
2025-05-16 18:02:05 (14024): Guest Log: -rwxrwxrwx. 1 root root    143360 May 16 17:02 result.tar.gz
2025-05-16 18:02:05 (14024): Guest Log: -rwxrwxrwx. 1 root root     17569 May 16 16:39 start_atlas.sh
2025-05-16 18:02:05 (14024): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-16 18:02:05 (14024): VM Completion File Detected.
2025-05-16 18:02:05 (14024): Powering off VM.
2025-05-16 18:02:05 (14024): Successfully stopped VM.
2025-05-16 18:02:05 (14024): Deregistering VM. (boinc_61036d430ff925fe, slot#0)
2025-05-16 18:02:06 (14024): Removing network bandwidth throttle group from VM.
2025-05-16 18:02:06 (14024): Removing VM from VirtualBox.
18:02:11 (14024): called boinc_finish(0)

</stderr_txt>
]]>

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