Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
01:28:31 (116927): wrapper (7.7.26015): starting
01:28:31 (116927): wrapper: running run_atlas (--nthreads 8)
[2025-05-18 01:28:31] Arguments: --nthreads 8
[2025-05-18 01:28:31] Threads: 8
[2025-05-18 01:28:31] Checking for CVMFS
[2025-05-18 01:28:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-18 01:28:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-18 01:28:31] Running cvmfs_config stat atlas.cern.ch
[2025-05-18 01:28:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-18 01:28:31] 2.12.7.0 1052871 4919 113292 146117 2 56 3605533 6144001 916 130560 0 8952719 99.9957 1242627 3993 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-05-18 01:28:31] CVMFS is ok
[2025-05-18 01:28:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-18 01:28:31] Checking for apptainer binary...
[2025-05-18 01:28:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-18 01:28:31] Running /usr/bin/apptainer --version
[2025-05-18 01:28:31] apptainer version 1.4.0
[2025-05-18 01:28:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-18 01:28:31] Ryzen5
[2025-05-18 01:28:31] apptainer works
[2025-05-18 01:28:31] Set ATHENA_PROC_NUMBER=8
[2025-05-18 01:28:31] Set ATHENA_CORE_NUMBER=8
[2025-05-18 01:28:31] Starting ATLAS job with PandaID=6649891001
[2025-05-18 01:28:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc4/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-18 02:41:57]  *** The last 200 lines of the pilot log: ***
[2025-05-18 02:41:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-18 02:41:57]  is_altstaged=None
[2025-05-18 02:41:57]  is_tar=False
[2025-05-18 02:41:57]  lfn=log.44638099._003017.job.log.tgz.1
[2025-05-18 02:41:57]  mtime=0
[2025-05-18 02:41:57]  protocol_id=None
[2025-05-18 02:41:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-18 02:41:57]  replicas=None
[2025-05-18 02:41:57]  scope=mc23_13p6TeV
[2025-05-18 02:41:57]  status=None
[2025-05-18 02:41:57]  status_code=0
[2025-05-18 02:41:57]  storage_token=
[2025-05-18 02:41:57]  surl=/var/lib/boinc4/slots/0/PanDA_Pilot-6649891001/log.44638099._003017.job.log.tgz.1
[2025-05-18 02:41:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/33/log.44638099._003017.job.log.tgz.1
[2025-05-18 02:41:57]  workdir=None
[2025-05-18 02:41:57] ]
[2025-05-18 02:41:57] 2025-05-18 00:41:31,821 | INFO     | transferring file log.44638099._003017.job.log.tgz.1 from /var/lib/boinc4/slots/0/PanDA_Pilot-6649891001/log.44638099._003017.job.log.tgz.1 to /var/lib/boinc4/slot
[2025-05-18 02:41:57] 2025-05-18 00:41:31,822 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc4/slots/0/PanDA_Pilot-6649891001/log.44638099._003017.job.log.tgz.1 /var/lib/boinc4/slots/0/log.44638099._003017.j
[2025-05-18 02:41:57] 2025-05-18 00:41:31,833 | INFO     | adding to output.list: log.44638099._003017.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/33/log.44638099._003017.job.log.tg
[2025-05-18 02:41:57] 2025-05-18 00:41:31,834 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-18 02:41:57] 2025-05-18 00:41:31,834 | INFO     | summary of transferred files:
[2025-05-18 02:41:57] 2025-05-18 00:41:31,834 | INFO     |  -- lfn=log.44638099._003017.job.log.tgz.1, status_code=0, status=transferred
[2025-05-18 02:41:57] 2025-05-18 00:41:31,834 | INFO     | stage-out finished correctly
[2025-05-18 02:41:57] 2025-05-18 00:41:32,159 | INFO     | monitor loop #333: job 0:6649891001 is in state 'finished'
[2025-05-18 02:41:57] 2025-05-18 00:41:32,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-18 02:41:57] 2025-05-18 00:41:34,661 | INFO     | monitor loop #334: job 0:6649891001 is in state 'finished'
[2025-05-18 02:41:57] 2025-05-18 00:41:34,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-18 02:41:57] 2025-05-18 00:41:35,380 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-18 02:41:57] 2025-05-18 00:41:35,520 | INFO     | job 6649891001 has state=finished
[2025-05-18 02:41:57] 2025-05-18 00:41:35,520 | INFO     | preparing for final server update for job 6649891001 in state='finished'
[2025-05-18 02:41:57] 2025-05-18 00:41:35,520 | INFO     | this job has now completed (state=finished)
[2025-05-18 02:41:57] 2025-05-18 00:41:35,520 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-18 02:41:57] 2025-05-18 00:41:35,520 | INFO     | log transfer has been attempted: DONE
[2025-05-18 02:41:57] 2025-05-18 00:41:35,520 | INFO     | job 6649891001 has finished - writing final server update
[2025-05-18 02:41:57] 2025-05-18 00:41:35,521 | INFO     | total number of processed events: 400 (read)
[2025-05-18 02:41:57] 2025-05-18 00:41:35,522 | INFO     | executing command: lscpu
[2025-05-18 02:41:57] 2025-05-18 00:41:35,539 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-18 02:41:57] 2025-05-18 00:41:37,163 | INFO     | monitor loop #335: job 0:6649891001 is in state 'finished'
[2025-05-18 02:41:57] 2025-05-18 00:41:37,163 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-18 02:41:57] 2025-05-18 00:41:38,447 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-18 02:41:57] 2025-05-18 00:41:38,447 | INFO     | using path: /var/lib/boinc4/slots/0/PanDA_Pilot-6649891001/memory_monitor_summary.json (trf name=prmon)
[2025-05-18 02:41:57] 2025-05-18 00:41:38,448 | INFO     | extracted standard info from prmon json
[2025-05-18 02:41:57] 2025-05-18 00:41:38,448 | INFO     | extracted standard memory fields from prmon json
[2025-05-18 02:41:57] 2025-05-18 00:41:38,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-18 02:41:57] 2025-05-18 00:41:38,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-18 02:41:57] 2025-05-18 00:41:38,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-18 02:41:57] 2025-05-18 00:41:38,449 | INFO     | fitting pss+swap vs Time
[2025-05-18 02:41:57] 2025-05-18 00:41:38,449 | INFO     | sum of square deviations: 85136480.0
[2025-05-18 02:41:57] 2025-05-18 00:41:38,450 | INFO     | sum of deviations: -9605857697.000002
[2025-05-18 02:41:57] 2025-05-18 00:41:38,450 | INFO     | mean x: 1747526793.0
[2025-05-18 02:41:57] 2025-05-18 00:41:38,450 | INFO     | mean y: 2723728.523076923
[2025-05-18 02:41:57] 2025-05-18 00:41:38,450 | INFO     | -- intersect: 197174296892.6095
[2025-05-18 02:41:57] 2025-05-18 00:41:38,450 | INFO     | intersect: 197174296892.6095
[2025-05-18 02:41:57] 2025-05-18 00:41:38,450 | INFO     | chi2: 0.06528730318829493
[2025-05-18 02:41:57] 2025-05-18 00:41:38,450 | INFO     | -- intersect: 197174296892.6095
[2025-05-18 02:41:57] 2025-05-18 00:41:38,450 | INFO     | current memory leak: -112.83 B/s (using 65 data points, chi2=0.07)
[2025-05-18 02:41:57] 2025-05-18 00:41:38,450 | INFO     | ..............................
[2025-05-18 02:41:57] 2025-05-18 00:41:38,450 | INFO     | . Timing measurements:
[2025-05-18 02:41:57] 2025-05-18 00:41:38,450 | INFO     | . get job = 0 s
[2025-05-18 02:41:57] 2025-05-18 00:41:38,451 | INFO     | . initial setup = 1 s
[2025-05-18 02:41:57] 2025-05-18 00:41:38,451 | INFO     | . payload setup = 3 s
[2025-05-18 02:41:57] 2025-05-18 00:41:38,451 | INFO     | . stage-in = 0 s
[2025-05-18 02:41:57] 2025-05-18 00:41:38,451 | INFO     | . payload execution = 4354 s
[2025-05-18 02:41:57] 2025-05-18 00:41:38,451 | INFO     | . stage-out = 0 s
[2025-05-18 02:41:57] 2025-05-18 00:41:38,451 | INFO     | . log creation = 0 s
[2025-05-18 02:41:57] 2025-05-18 00:41:38,451 | INFO     | ..............................
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | 
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | job summary report
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | --------------------------------------------------
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | PanDA job id: 6649891001
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | task id: 44638099
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | errors: (none)
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | pilot state: finished 
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | transexitcode: 0
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | exeerrorcode: 0
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | exeerrordiag: 
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | exitcode: 0
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | exitmsg: OK
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | cpuconsumptiontime: 31578 s
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | nevents: 400
[2025-05-18 02:41:57] 2025-05-18 00:41:38,521 | INFO     | neventsw: 0
[2025-05-18 02:41:57] 2025-05-18 00:41:38,522 | INFO     | pid: 127162
[2025-05-18 02:41:57] 2025-05-18 00:41:38,522 | INFO     | pgrp: 127162
[2025-05-18 02:41:57] 2025-05-18 00:41:38,522 | INFO     | corecount: 8
[2025-05-18 02:41:57] 2025-05-18 00:41:38,522 | INFO     | event service: False
[2025-05-18 02:41:57] 2025-05-18 00:41:38,522 | INFO     | sizes: {0: 2393709, 2: 2393915, 11: 2393943, 4360: 2419980, 4362: 2428923, 4365: 2428979, 4368: 2429277}
[2025-05-18 02:41:57] 2025-05-18 00:41:38,522 | INFO     | --------------------------------------------------
[2025-05-18 02:41:57] 2025-05-18 00:41:38,522 | INFO     | 
[2025-05-18 02:41:57] 2025-05-18 00:41:38,522 | INFO     | executing command: ls -lF /var/lib/boinc4/slots/0
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-18 02:41:57] 2025-05-18 00:41:38,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-18 02:41:57] 2025-05-18 00:41:38,535 | INFO     | job 6649891001 has completed (purged errors)
[2025-05-18 02:41:57] 2025-05-18 00:41:38,535 | INFO     | overall cleanup function is called
[2025-05-18 02:41:57] 2025-05-18 00:41:39,538 | INFO     | --- collectZombieJob: --- 10, [127162]
[2025-05-18 02:41:57] 2025-05-18 00:41:39,538 | INFO     | zombie collector waiting for pid 127162
[2025-05-18 02:41:57] 2025-05-18 00:41:39,538 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-18 02:41:57] 2025-05-18 00:41:39,538 | INFO     | collected zombie processes
[2025-05-18 02:41:57] 2025-05-18 00:41:39,538 | INFO     | will attempt to kill all subprocesses of pid=127162
[2025-05-18 02:41:57] 2025-05-18 00:41:39,609 | INFO     | process IDs to be killed: [127162] (in reverse order)
[2025-05-18 02:41:57] 2025-05-18 00:41:39,637 | WARNING  | found no corresponding commands to process id(s)
[2025-05-18 02:41:57] 2025-05-18 00:41:39,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-18 02:41:57] 2025-05-18 00:41:39,640 | INFO     | did not find any defunct processes belonging to 127162
[2025-05-18 02:41:57] 2025-05-18 00:41:39,642 | INFO     | did not find any defunct processes belonging to 127162
[2025-05-18 02:41:57] 2025-05-18 00:41:39,642 | INFO     | ready for new job
[2025-05-18 02:41:57] 2025-05-18 00:41:39,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-18 02:41:57] 2025-05-18 00:41:39,643 | INFO     | **************************************
[2025-05-18 02:41:57] 2025-05-18 00:41:39,643 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-18 02:41:57] 2025-05-18 00:41:39,643 | INFO     | **************************************
[2025-05-18 02:41:57] 2025-05-18 00:41:39,643 | INFO     | 
[2025-05-18 02:41:57] 2025-05-18 00:41:39,644 | INFO     | architecture information:
[2025-05-18 02:41:57] 2025-05-18 00:41:39,644 | INFO     | executing command: cat /etc/os-release
[2025-05-18 02:41:57] 2025-05-18 00:41:39,652 | INFO     | cat /etc/os-release:
[2025-05-18 02:41:57] NAME="CentOS Linux"
[2025-05-18 02:41:57] VERSION="7 (Core)"
[2025-05-18 02:41:57] ID="centos"
[2025-05-18 02:41:57] ID_LIKE="rhel fedora"
[2025-05-18 02:41:57] VERSION_ID="7"
[2025-05-18 02:41:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-18 02:41:57] ANSI_COLOR="0;31"
[2025-05-18 02:41:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-18 02:41:57] HOME_URL="https://www.centos.org/"
[2025-05-18 02:41:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-18 02:41:57] 
[2025-05-18 02:41:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-18 02:41:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-18 02:41:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-18 02:41:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-18 02:41:57] 
[2025-05-18 02:41:57] 2025-05-18 00:41:39,652 | INFO     | **************************************
[2025-05-18 02:41:57] 2025-05-18 00:41:40,155 | INFO     | executing command: df -mP /var/lib/boinc4/slots/0
[2025-05-18 02:41:57] 2025-05-18 00:41:40,165 | INFO     | sufficient remaining disk space (395509235712 B)
[2025-05-18 02:41:57] 2025-05-18 00:41:40,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-18 02:41:57] 2025-05-18 00:41:40,165 | INFO     | current server update state: UPDATING_FINAL
[2025-05-18 02:41:57] 2025-05-18 00:41:40,165 | INFO     | update_server=False
[2025-05-18 02:41:57] 2025-05-18 00:41:40,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-18 02:41:57] 2025-05-18 00:41:40,166 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-18 02:41:57] 2025-05-18 00:41:40,166 | INFO     | found 0 job(s) in 20 queues
[2025-05-18 02:41:57] 2025-05-18 00:41:40,166 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-18 02:41:57] 2025-05-18 00:41:40,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-18 02:41:57] 2025-05-18 00:41:40,166 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-18 02:41:57] 2025-05-18 00:41:40,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-18 02:41:57] 2025-05-18 00:41:40,583 | INFO     | all payload control threads have been joined
[2025-05-18 02:41:57] 2025-05-18 00:41:40,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-18 02:41:57] 2025-05-18 00:41:40,670 | INFO     | aborting loop
[2025-05-18 02:41:57] 2025-05-18 00:41:40,826 | INFO     | all data control threads have been joined
[2025-05-18 02:41:57] 2025-05-18 00:41:41,170 | INFO     | [job] queue monitor thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:41,171 | INFO     | [job] retrieve thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:41,328 | INFO     | [payload] validate_post thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:41,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-18 02:41:57] 2025-05-18 00:41:41,583 | INFO     | [payload] control thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:41,673 | INFO     | [job] job monitor thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:41,803 | INFO     | [data] copytool_in thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:41,825 | INFO     | all job control threads have been joined
[2025-05-18 02:41:57] 2025-05-18 00:41:41,829 | INFO     | [data] control thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:41,905 | INFO     | [payload] failed_post thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:42,113 | INFO     | [job] validate thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:42,156 | INFO     | [payload] execute_payloads thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:42,171 | INFO     | [data] copytool_out thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:42,313 | INFO     | [job] create_data_payload thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:42,512 | INFO     | [payload] validate_pre thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:42,830 | INFO     | [job] control thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:45,453 | INFO     | [data] queue_monitor thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:50,304 | INFO     | job.realtimelogging is not enabled
[2025-05-18 02:41:57] 2025-05-18 00:41:51,309 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-18 02:41:57] 2025-05-18 00:41:52,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123132929759040)>', '<ExcThread(monitor, started 123132576769792)>']
[2025-05-18 02:41:57] 2025-05-18 00:41:53,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-18 02:41:57] 2025-05-18 00:41:53,224 | INFO     | [monitor] control thread has ended
[2025-05-18 02:41:57] 2025-05-18 00:41:57,686 | INFO     | all workflow threads have been joined
[2025-05-18 02:41:57] 2025-05-18 00:41:57,686 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-18 02:41:57] 2025-05-18 00:41:57,686 | INFO     | traces error code: 0
[2025-05-18 02:41:57] 2025-05-18 00:41:57,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-18 02:41:57] 2025-05-18 00:41:57,751 [wrapper] ==== pilot stdout END ====
[2025-05-18 02:41:57] 2025-05-18 00:41:57,753 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-18 02:41:57] 2025-05-18 00:41:57,754 [wrapper] pilotpid: 120635
[2025-05-18 02:41:57] 2025-05-18 00:41:57,756 [wrapper] Pilot exit status: 0
[2025-05-18 02:41:57] 2025-05-18 00:41:57,762 [wrapper] pandaids: 6649891001
[2025-05-18 02:41:57] 2025-05-18 00:41:57,782 [wrapper] cleanup supervisor_pilot  157840 120636
[2025-05-18 02:41:57] 2025-05-18 00:41:57,784 [wrapper] Test setup, not cleaning
[2025-05-18 02:41:57] 2025-05-18 00:41:57,785 [wrapper] apfmon messages muted
[2025-05-18 02:41:57] 2025-05-18 00:41:57,787 [wrapper] ==== wrapper stdout END ====
[2025-05-18 02:41:57] 2025-05-18 00:41:57,788 [wrapper] ==== wrapper stderr END ====
[2025-05-18 02:41:57]  *** Error codes and diagnostics ***
[2025-05-18 02:41:57]     "exeErrorCode": 0,
[2025-05-18 02:41:57]     "exeErrorDiag": "",
[2025-05-18 02:41:57]     "pilotErrorCode": 0,
[2025-05-18 02:41:57]     "pilotErrorDiag": "",
[2025-05-18 02:41:57]  *** Listing of results directory ***
[2025-05-18 02:41:57] insgesamt 413444
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc    503527  3. Apr 09:42 pilot3.tar.gz
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc      5111 14. Mai 15:08 queuedata.json
[2025-05-18 02:41:57] -rwx------ 1 boinc boinc     37140 14. Mai 15:10 runpilot2-wrapper.sh
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc       100 18. Mai 01:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-18 02:41:57] -rwxr-xr-x 1 boinc boinc      7986 18. Mai 01:28 run_atlas
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc       105 18. Mai 01:28 job.xml
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc      6944 18. Mai 01:28 init_data.xml
[2025-05-18 02:41:57] -rw-r--r-- 2 boinc boinc 222081862 18. Mai 01:28 EVNT.44638096._000121.pool.root.1
[2025-05-18 02:41:57] drwxrwx--x 2 boinc boinc      4096 18. Mai 01:28 shared
[2025-05-18 02:41:57] -rw-r--r-- 2 boinc boinc    517091 18. Mai 01:28 input.tar.gz
[2025-05-18 02:41:57] -rw-r--r-- 2 boinc boinc     17569 18. Mai 01:28 start_atlas.sh
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc         0 18. Mai 01:28 boinc_lockfile
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc      2538 18. Mai 01:28 pandaJob.out
[2025-05-18 02:41:57] -rw------- 1 boinc boinc       461 18. Mai 01:28 setup.sh.local
[2025-05-18 02:41:57] -rw------- 1 boinc boinc    994627 18. Mai 01:28 agis_schedconf.cvmfs.json
[2025-05-18 02:41:57] -rw------- 1 boinc boinc   1596741 18. Mai 01:28 agis_ddmendpoints.agis.ALL.json
[2025-05-18 02:41:57] drwx------ 4 boinc boinc      4096 18. Mai 01:28 pilot3
[2025-05-18 02:41:57] -rw------- 1 boinc boinc 195912205 18. Mai 02:41 HITS.44638099._003017.pool.root.1
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc       529 18. Mai 02:41 boinc_task_state.xml
[2025-05-18 02:41:57] -rw------- 1 boinc boinc        95 18. Mai 02:41 pilot_heartbeat.json
[2025-05-18 02:41:57] -rw------- 1 boinc boinc      1012 18. Mai 02:41 memory_monitor_summary.json
[2025-05-18 02:41:57] -rw------- 1 boinc boinc    310836 18. Mai 02:41 log.44638099._003017.job.log.tgz.1
[2025-05-18 02:41:57] -rw------- 1 boinc boinc      7637 18. Mai 02:41 heartbeat.json
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc        27 18. Mai 02:41 wrapper_checkpoint.txt
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc      8192 18. Mai 02:41 boinc_mmap_file
[2025-05-18 02:41:57] -rw------- 1 boinc boinc      4550 18. Mai 02:41 pilotlog.txt
[2025-05-18 02:41:57] -rw------- 1 boinc boinc    443505 18. Mai 02:41 log.44638099._003017.job.log.1
[2025-05-18 02:41:57] -rw------- 1 boinc boinc       357 18. Mai 02:41 output.list
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc       620 18. Mai 02:41 runtime_log
[2025-05-18 02:41:57] -rw------- 1 boinc boinc    778240 18. Mai 02:41 result.tar.gz
[2025-05-18 02:41:57] -rw------- 1 boinc boinc       642 18. Mai 02:41 ZUjKDmp3QZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmofFKDmBICf2m.diag
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc     11355 18. Mai 02:41 runtime_log.err
[2025-05-18 02:41:57] -rw-r--r-- 1 boinc boinc     21029 18. Mai 02:41 stderr.txt
[2025-05-18 02:41:57] HITS file was successfully produced:
[2025-05-18 02:41:57] -rw------- 1 boinc boinc 195912205 18. Mai 02:41 shared/HITS.pool.root.1
[2025-05-18 02:41:57]  *** Contents of shared directory: ***
[2025-05-18 02:41:57] insgesamt 409500
[2025-05-18 02:41:57] -rw-r--r-- 2 boinc boinc 222081862 18. Mai 01:28 ATLAS.root_0
[2025-05-18 02:41:57] -rw-r--r-- 2 boinc boinc    517091 18. Mai 01:28 input.tar.gz
[2025-05-18 02:41:57] -rw-r--r-- 2 boinc boinc     17569 18. Mai 01:28 start_atlas.sh
[2025-05-18 02:41:57] -rw------- 1 boinc boinc 195912205 18. Mai 02:41 HITS.pool.root.1
[2025-05-18 02:41:57] -rw------- 1 boinc boinc    778240 18. Mai 02:41 result.tar.gz
02:41:59 (116927): run_atlas exited; CPU time 31617.010397
02:41:59 (116927): called boinc_finish(0)

</stderr_txt>
]]>

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