Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:07:28 (1675689): wrapper (7.7.26015): starting
02:07:28 (1675689): wrapper: running run_atlas (--nthreads 4)
[2025-05-17 02:07:28] Arguments: --nthreads 4
[2025-05-17 02:07:28] Threads: 4
[2025-05-17 02:07:28] Checking for CVMFS
[2025-05-17 02:07:28] No cvmfs_config command found, will try listing directly
[2025-05-17 02:07:28] CVMFS is ok
[2025-05-17 02:07:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 02:07:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 02:07:28] Further information can be found at the LHC@home message board.
[2025-05-17 02:07:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 02:07:28] Checking for apptainer binary...
[2025-05-17 02:07:28] which: no apptainer in ((null))
[2025-05-17 02:07:28] apptainer is not installed, using version from CVMFS
[2025-05-17 02:07:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 02:07:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-05-17 02:07:29] apptainer works
[2025-05-17 02:07:29] Set ATHENA_PROC_NUMBER=4
[2025-05-17 02:07:29] Set ATHENA_CORE_NUMBER=4
[2025-05-17 02:07:29] Starting ATLAS job with PandaID=6651459787
[2025-05-17 02:07:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 05:18:51]  *** The last 200 lines of the pilot log: ***
[2025-05-17 05:18:51] 2025-05-17 03:18:38,454 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-17 05:18:51] 2025-05-17 03:18:38,454 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6651459787/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 05:18:51] 2025-05-17 03:18:38,455 | INFO     | extracted standard info from prmon json
[2025-05-17 05:18:51] 2025-05-17 03:18:38,455 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 05:18:51] 2025-05-17 03:18:38,456 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 05:18:51] 2025-05-17 03:18:38,456 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 05:18:51] 2025-05-17 03:18:38,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 05:18:51] 2025-05-17 03:18:38,460 | INFO     | fitting pss+swap vs Time
[2025-05-17 05:18:51] 2025-05-17 03:18:38,461 | INFO     | sum of square deviations: 2060343747.0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,462 | INFO     | sum of deviations: 48897375275.99999
[2025-05-17 05:18:51] 2025-05-17 03:18:38,462 | INFO     | mean x: 1747446186.5
[2025-05-17 05:18:51] 2025-05-17 03:18:38,462 | INFO     | mean y: 2267221.638297872
[2025-05-17 05:18:51] 2025-05-17 03:18:38,462 | INFO     | -- intersect: -41469226105.783424
[2025-05-17 05:18:51] 2025-05-17 03:18:38,462 | INFO     | intersect: -41469226105.783424
[2025-05-17 05:18:51] 2025-05-17 03:18:38,463 | INFO     | chi2: 3.5844449553429567
[2025-05-17 05:18:51] 2025-05-17 03:18:38,463 | INFO     | sum of square deviations: 1900284932.0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,464 | INFO     | sum of deviations: 58821716474.0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,464 | INFO     | mean x: 1747446034.0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,464 | INFO     | mean y: 2276439.9836065574
[2025-05-17 05:18:51] 2025-05-17 03:18:38,464 | INFO     | -- intersect: -54088440922.79752
[2025-05-17 05:18:51] 2025-05-17 03:18:38,465 | INFO     | intersect: -54088440922.79752
[2025-05-17 05:18:51] 2025-05-17 03:18:38,465 | INFO     | chi2: 2.828906559701375
[2025-05-17 05:18:51] 2025-05-17 03:18:38,465 | INFO     | current chi2=2.828906559701375 (change=21.078253538679114 %)
[2025-05-17 05:18:51] 2025-05-17 03:18:38,465 | INFO     | right removable region: 182
[2025-05-17 05:18:51] 2025-05-17 03:18:38,465 | INFO     | sum of square deviations: 1900284932.0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,466 | INFO     | sum of deviations: 12092996788.999998
[2025-05-17 05:18:51] 2025-05-17 03:18:38,466 | INFO     | mean x: 1747446339.0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,467 | INFO     | mean y: 2302115.136612022
[2025-05-17 05:18:51] 2025-05-17 03:18:38,467 | INFO     | -- intersect: -11118063368.283852
[2025-05-17 05:18:51] 2025-05-17 03:18:38,467 | INFO     | intersect: -11118063368.283852
[2025-05-17 05:18:51] 2025-05-17 03:18:38,467 | INFO     | chi2: 1.6574664597935276
[2025-05-17 05:18:51] 2025-05-17 03:18:38,467 | INFO     | current chi2=1.6574664597935276 (change=53.75946679491016 %)
[2025-05-17 05:18:51] 2025-05-17 03:18:38,467 | INFO     | sum of square deviations: 1748737904.5
[2025-05-17 05:18:51] 2025-05-17 03:18:38,468 | INFO     | sum of deviations: -13057109231.0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,468 | INFO     | mean x: 1747446491.5
[2025-05-17 05:18:51] 2025-05-17 03:18:38,468 | INFO     | mean y: 2327425.550561798
[2025-05-17 05:18:51] 2025-05-17 03:18:38,469 | INFO     | -- intersect: 13049794204.951645
[2025-05-17 05:18:51] 2025-05-17 03:18:38,469 | INFO     | intersect: 13049794204.951645
[2025-05-17 05:18:51] 2025-05-17 03:18:38,469 | INFO     | chi2: 0.8701397978088623
[2025-05-17 05:18:51] 2025-05-17 03:18:38,469 | INFO     | current chi2=0.8701397978088623 (change=47.50181563750879 %)
[2025-05-17 05:18:51] 2025-05-17 03:18:38,469 | INFO     | sum of square deviations: 1605470102.0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,470 | INFO     | sum of deviations: -11017931508.0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,470 | INFO     | mean x: 1747446644.0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,470 | INFO     | mean y: 2325179.5953757227
[2025-05-17 05:18:51] 2025-05-17 03:18:38,470 | INFO     | -- intersect: 11994605455.317669
[2025-05-17 05:18:51] 2025-05-17 03:18:38,471 | INFO     | intersect: 11994605455.317669
[2025-05-17 05:18:51] 2025-05-17 03:18:38,471 | INFO     | chi2: 0.8378274830926552
[2025-05-17 05:18:51] 2025-05-17 03:18:38,471 | INFO     | current chi2=0.8378274830926552 (change=3.7134624571332306 %)
[2025-05-17 05:18:51] 2025-05-17 03:18:38,471 | INFO     | left removable region: 30
[2025-05-17 05:18:51] 2025-05-17 03:18:38,471 | INFO     | sum of square deviations: 1088905998.0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,472 | INFO     | sum of deviations: 3306148698.9999995
[2025-05-17 05:18:51] 2025-05-17 03:18:38,472 | INFO     | mean x: 1747446918.5
[2025-05-17 05:18:51] 2025-05-17 03:18:38,472 | INFO     | mean y: 2332635.1710526315
[2025-05-17 05:18:51] 2025-05-17 03:18:38,472 | INFO     | -- intersect: -5303285450.11966
[2025-05-17 05:18:51] 2025-05-17 03:18:38,472 | INFO     | intersect: -5303285450.11966
[2025-05-17 05:18:51] 2025-05-17 03:18:38,473 | INFO     | chi2: 0.00017908575646871425
[2025-05-17 05:18:51] 2025-05-17 03:18:38,473 | INFO     | -- intersect: -5303285450.11966
[2025-05-17 05:18:51] 2025-05-17 03:18:38,473 | INFO     | current memory leak: 3.04 B/s (using 152 data points, chi2=0.00)
[2025-05-17 05:18:51] 2025-05-17 03:18:38,474 | INFO     | ..............................
[2025-05-17 05:18:51] 2025-05-17 03:18:38,474 | INFO     | . Timing measurements:
[2025-05-17 05:18:51] 2025-05-17 03:18:38,474 | INFO     | . get job = 0 s
[2025-05-17 05:18:51] 2025-05-17 03:18:38,474 | INFO     | . initial setup = 1 s
[2025-05-17 05:18:51] 2025-05-17 03:18:38,474 | INFO     | . payload setup = 5 s
[2025-05-17 05:18:51] 2025-05-17 03:18:38,474 | INFO     | . stage-in = 0 s
[2025-05-17 05:18:51] 2025-05-17 03:18:38,474 | INFO     | . payload execution = 11426 s
[2025-05-17 05:18:51] 2025-05-17 03:18:38,474 | INFO     | . stage-out = 1 s
[2025-05-17 05:18:51] 2025-05-17 03:18:38,474 | INFO     | . log creation = 0 s
[2025-05-17 05:18:51] 2025-05-17 03:18:38,474 | INFO     | ..............................
[2025-05-17 05:18:51] 2025-05-17 03:18:38,579 | INFO     | 
[2025-05-17 05:18:51] 2025-05-17 03:18:38,579 | INFO     | job summary report
[2025-05-17 05:18:51] 2025-05-17 03:18:38,579 | INFO     | --------------------------------------------------
[2025-05-17 05:18:51] 2025-05-17 03:18:38,579 | INFO     | PanDA job id: 6651459787
[2025-05-17 05:18:51] 2025-05-17 03:18:38,579 | INFO     | task id: 44638099
[2025-05-17 05:18:51] 2025-05-17 03:18:38,579 | INFO     | errors: (none)
[2025-05-17 05:18:51] 2025-05-17 03:18:38,579 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | pilot state: finished 
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | transexitcode: 0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | exeerrorcode: 0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | exeerrordiag: 
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | exitcode: 0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | exitmsg: OK
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | cpuconsumptiontime: 41436 s
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | nevents: 400
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | neventsw: 0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | pid: 1686622
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | pgrp: 1686622
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | corecount: 4
[2025-05-17 05:18:51] 2025-05-17 03:18:38,580 | INFO     | event service: False
[2025-05-17 05:18:51] 2025-05-17 03:18:38,581 | INFO     | sizes: {0: 2393721, 4: 2393927, 11: 2393955, 11435: 2423083, 11436: 2423082, 11437: 2432101, 11440: 2432285, 11445: 2432455}
[2025-05-17 05:18:51] 2025-05-17 03:18:38,581 | INFO     | --------------------------------------------------
[2025-05-17 05:18:51] 2025-05-17 03:18:38,581 | INFO     | 
[2025-05-17 05:18:51] 2025-05-17 03:18:38,581 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-05-17 05:18:51] 2025-05-17 03:18:38,603 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,603 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,603 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,604 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,604 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,605 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,605 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,605 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,605 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,605 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,605 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 05:18:51] 2025-05-17 03:18:38,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,606 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 05:18:51] 2025-05-17 03:18:38,606 | INFO     | job 6651459787 has completed (purged errors)
[2025-05-17 05:18:51] 2025-05-17 03:18:38,606 | INFO     | overall cleanup function is called
[2025-05-17 05:18:51] 2025-05-17 03:18:39,614 | INFO     | --- collectZombieJob: --- 10, [1686622]
[2025-05-17 05:18:51] 2025-05-17 03:18:39,615 | INFO     | zombie collector waiting for pid 1686622
[2025-05-17 05:18:51] 2025-05-17 03:18:39,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 05:18:51] 2025-05-17 03:18:39,615 | INFO     | collected zombie processes
[2025-05-17 05:18:51] 2025-05-17 03:18:39,615 | INFO     | will attempt to kill all subprocesses of pid=1686622
[2025-05-17 05:18:51] 2025-05-17 03:18:39,941 | INFO     | process IDs to be killed: [1686622] (in reverse order)
[2025-05-17 05:18:51] 2025-05-17 03:18:40,049 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 05:18:51] 2025-05-17 03:18:40,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 05:18:51] 2025-05-17 03:18:40,063 | INFO     | did not find any defunct processes belonging to 1686622
[2025-05-17 05:18:51] 2025-05-17 03:18:40,072 | INFO     | did not find any defunct processes belonging to 1686622
[2025-05-17 05:18:51] 2025-05-17 03:18:40,073 | INFO     | ready for new job
[2025-05-17 05:18:51] 2025-05-17 03:18:40,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 05:18:51] 2025-05-17 03:18:40,074 | INFO     | **************************************
[2025-05-17 05:18:51] 2025-05-17 03:18:40,075 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 05:18:51] 2025-05-17 03:18:40,075 | INFO     | **************************************
[2025-05-17 05:18:51] 2025-05-17 03:18:40,075 | INFO     | 
[2025-05-17 05:18:51] 2025-05-17 03:18:40,079 | INFO     | architecture information:
[2025-05-17 05:18:51] 2025-05-17 03:18:40,079 | INFO     | executing command: cat /etc/os-release
[2025-05-17 05:18:51] 2025-05-17 03:18:40,097 | INFO     | cat /etc/os-release:
[2025-05-17 05:18:51] NAME="CentOS Linux"
[2025-05-17 05:18:51] VERSION="7 (Core)"
[2025-05-17 05:18:51] ID="centos"
[2025-05-17 05:18:51] ID_LIKE="rhel fedora"
[2025-05-17 05:18:51] VERSION_ID="7"
[2025-05-17 05:18:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 05:18:51] ANSI_COLOR="0;31"
[2025-05-17 05:18:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 05:18:51] HOME_URL="https://www.centos.org/"
[2025-05-17 05:18:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 05:18:51] 
[2025-05-17 05:18:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 05:18:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 05:18:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 05:18:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 05:18:51] 
[2025-05-17 05:18:51] 2025-05-17 03:18:40,098 | INFO     | **************************************
[2025-05-17 05:18:51] 2025-05-17 03:18:40,600 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-05-17 05:18:51] 2025-05-17 03:18:40,619 | INFO     | sufficient remaining disk space (691718324224 B)
[2025-05-17 05:18:51] 2025-05-17 03:18:40,619 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 05:18:51] 2025-05-17 03:18:40,620 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 05:18:51] 2025-05-17 03:18:40,620 | INFO     | update_server=False
[2025-05-17 05:18:51] 2025-05-17 03:18:40,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 05:18:51] 2025-05-17 03:18:40,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 05:18:51] 2025-05-17 03:18:40,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 05:18:51] 2025-05-17 03:18:40,621 | INFO     | aborting loop
[2025-05-17 05:18:51] 2025-05-17 03:18:41,055 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 05:18:51] 2025-05-17 03:18:41,055 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 05:18:51] 2025-05-17 03:18:41,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 05:18:51] 2025-05-17 03:18:41,176 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 05:18:51] 2025-05-17 03:18:41,298 | INFO     | all job control threads have been joined
[2025-05-17 05:18:51] 2025-05-17 03:18:41,376 | INFO     | all data control threads have been joined
[2025-05-17 05:18:51] 2025-05-17 03:18:41,625 | INFO     | [job] retrieve thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:41,626 | INFO     | [job] job monitor thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:41,693 | INFO     | [payload] validate_post thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:41,739 | INFO     | [data] copytool_in thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:41,902 | INFO     | [job] validate thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:42,012 | INFO     | all payload control threads have been joined
[2025-05-17 05:18:51] 2025-05-17 03:18:42,074 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:42,184 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:42,303 | INFO     | [job] control thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:42,382 | INFO     | [data] control thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:42,483 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:42,493 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:42,898 | INFO     | [payload] failed_post thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:43,018 | INFO     | [payload] control thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:43,182 | INFO     | [data] copytool_out thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:43,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 05:18:51] 2025-05-17 03:18:44,593 | INFO     | [job] queue monitor thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:44,627 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 05:18:51] 2025-05-17 03:18:46,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23207903831872)>', '<ExcThread(monitor, started 23207660705536)>']
[2025-05-17 05:18:51] 2025-05-17 03:18:47,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 05:18:51] 2025-05-17 03:18:47,085 | INFO     | [monitor] control thread has ended
[2025-05-17 05:18:51] 2025-05-17 03:18:51,221 | INFO     | all workflow threads have been joined
[2025-05-17 05:18:51] 2025-05-17 03:18:51,222 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 05:18:51] 2025-05-17 03:18:51,222 | INFO     | traces error code: 0
[2025-05-17 05:18:51] 2025-05-17 03:18:51,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 05:18:51] 2025-05-17 03:18:51,359 [wrapper] ==== pilot stdout END ====
[2025-05-17 05:18:51] 2025-05-17 03:18:51,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 05:18:51] 2025-05-17 03:18:51,365 [wrapper] pilotpid: 1679384
[2025-05-17 05:18:51] 2025-05-17 03:18:51,367 [wrapper] Pilot exit status: 0
[2025-05-17 05:18:51] 2025-05-17 03:18:51,378 [wrapper] pandaids: 6651459787
[2025-05-17 05:18:51] 2025-05-17 03:18:51,443 [wrapper] cleanup supervisor_pilot 2218249 1679385
[2025-05-17 05:18:51] 2025-05-17 03:18:51,446 [wrapper] Test setup, not cleaning
[2025-05-17 05:18:51] 2025-05-17 03:18:51,448 [wrapper] apfmon messages muted
[2025-05-17 05:18:51] 2025-05-17 03:18:51,452 [wrapper] ==== wrapper stdout END ====
[2025-05-17 05:18:51] 2025-05-17 03:18:51,454 [wrapper] ==== wrapper stderr END ====
[2025-05-17 05:18:51]  *** Error codes and diagnostics ***
[2025-05-17 05:18:51]     "exeErrorCode": 0,
[2025-05-17 05:18:51]     "exeErrorDiag": "",
[2025-05-17 05:18:51]     "pilotErrorCode": 0,
[2025-05-17 05:18:51]     "pilotErrorDiag": "",
[2025-05-17 05:18:51]  *** Listing of results directory ***
[2025-05-17 05:18:51] total 404968
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc    495897 May 16 10:36 pilot3.tar.gz
[2025-05-17 05:18:51] -rwx------ 1 boinc boinc     37140 May 16 11:00 runpilot2-wrapper.sh
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc      5111 May 16 11:00 queuedata.json
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc       100 May 17 02:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 05:18:51] -rwxr-xr-x 1 boinc boinc      7986 May 17 02:07 run_atlas
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc       105 May 17 02:07 job.xml
[2025-05-17 05:18:51] -rw-r--r-- 2 boinc boinc 219888120 May 17 02:07 EVNT.44638096._000673.pool.root.1
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc      6631 May 17 02:07 init_data.xml
[2025-05-17 05:18:51] -rw-r--r-- 2 boinc boinc     17569 May 17 02:07 start_atlas.sh
[2025-05-17 05:18:51] drwxrwx--x 2 boinc boinc      4096 May 17 02:07 shared
[2025-05-17 05:18:51] -rw-r--r-- 2 boinc boinc    508872 May 17 02:07 input.tar.gz
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc         0 May 17 02:07 boinc_lockfile
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc      2538 May 17 02:07 pandaJob.out
[2025-05-17 05:18:51] -rw------- 1 boinc boinc       424 May 17 02:07 setup.sh.local
[2025-05-17 05:18:51] -rw------- 1 boinc boinc    994643 May 17 02:07 agis_schedconf.cvmfs.json
[2025-05-17 05:18:51] drwx------ 4 boinc boinc      4096 May 17 02:07 pilot3
[2025-05-17 05:18:51] -rw------- 1 boinc boinc 188138142 May 17 05:17 HITS.44638099._037670.pool.root.1
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc       530 May 17 05:18 boinc_task_state.xml
[2025-05-17 05:18:51] -rw------- 1 boinc boinc        95 May 17 05:18 pilot_heartbeat.json
[2025-05-17 05:18:51] -rw------- 1 boinc boinc      1032 May 17 05:18 memory_monitor_summary.json
[2025-05-17 05:18:51] -rw------- 1 boinc boinc   1596741 May 17 05:18 agis_ddmendpoints.agis.ALL.json
[2025-05-17 05:18:51] -rw------- 1 boinc boinc    323319 May 17 05:18 log.44638099._037670.job.log.tgz.1
[2025-05-17 05:18:51] -rw------- 1 boinc boinc      7721 May 17 05:18 heartbeat.json
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc        28 May 17 05:18 wrapper_checkpoint.txt
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc      8192 May 17 05:18 boinc_mmap_file
[2025-05-17 05:18:51] -rw------- 1 boinc boinc      4363 May 17 05:18 pilotlog.txt
[2025-05-17 05:18:51] -rw------- 1 boinc boinc   1085594 May 17 05:18 log.44638099._037670.job.log.1
[2025-05-17 05:18:51] -rw------- 1 boinc boinc       357 May 17 05:18 output.list
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc       620 May 17 05:18 runtime_log
[2025-05-17 05:18:51] -rw------- 1 boinc boinc   1423360 May 17 05:18 result.tar.gz
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc     11424 May 17 05:18 runtime_log.err
[2025-05-17 05:18:51] -rw------- 1 boinc boinc       664 May 17 05:18 jLDNDmV65Z7n9Rq4apOajLDm4fhM0noT9bVof3QYDm3qIKDmd6L6Un.diag
[2025-05-17 05:18:51] -rw-r--r-- 1 boinc boinc     20611 May 17 05:18 stderr.txt
[2025-05-17 05:18:51] HITS file was successfully produced:
[2025-05-17 05:18:51] -rw------- 1 boinc boinc 188138142 May 17 05:17 shared/HITS.pool.root.1
[2025-05-17 05:18:51]  *** Contents of shared directory: ***
[2025-05-17 05:18:51] total 400388
[2025-05-17 05:18:51] -rw-r--r-- 2 boinc boinc 219888120 May 17 02:07 ATLAS.root_0
[2025-05-17 05:18:51] -rw-r--r-- 2 boinc boinc     17569 May 17 02:07 start_atlas.sh
[2025-05-17 05:18:51] -rw-r--r-- 2 boinc boinc    508872 May 17 02:07 input.tar.gz
[2025-05-17 05:18:51] -rw------- 1 boinc boinc 188138142 May 17 05:17 HITS.pool.root.1
[2025-05-17 05:18:51] -rw------- 1 boinc boinc   1423360 May 17 05:18 result.tar.gz
05:18:52 (1675689): run_atlas exited; CPU time 41889.789521
05:18:52 (1675689): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN