Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:02:10 (729211): wrapper (7.7.26015): starting
05:02:10 (729211): wrapper: running run_atlas (--nthreads 2)
[2025-05-17 05:02:10] Arguments: --nthreads 2
[2025-05-17 05:02:10] Threads: 2
[2025-05-17 05:02:10] Checking for CVMFS
[2025-05-17 05:02:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 05:02:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 05:02:11] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 05:02:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 05:02:11] 2.9.2.0 17933 3546 60352 146085 1 55 21941977 36864000 0 130560 0 1788367 99.986 862734 30550 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-17 05:02:11] CVMFS is ok
[2025-05-17 05:02:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 05:02:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 05:02:11] Further information can be found at the LHC@home message board.
[2025-05-17 05:02:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 05:02:11] Checking for apptainer binary...
[2025-05-17 05:02:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 05:02:11] Running /usr/bin/apptainer --version
[2025-05-17 05:02:11] apptainer version 1.3.6-6.1
[2025-05-17 05:02:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 05:02:11] thA389
[2025-05-17 05:02:11] apptainer works
[2025-05-17 05:02:11] Set ATHENA_PROC_NUMBER=2
[2025-05-17 05:02:11] Set ATHENA_CORE_NUMBER=2
[2025-05-17 05:02:11] Starting ATLAS job with PandaID=6651457263
[2025-05-17 05:02:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 07:40:05]  *** The last 200 lines of the pilot log: ***
[2025-05-17 07:40:05] 2025-05-17 05:39:45,609 | INFO     | extracted standard info from prmon json
[2025-05-17 07:40:05] 2025-05-17 05:39:45,609 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 07:40:05] 2025-05-17 05:39:45,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 07:40:05] 2025-05-17 05:39:45,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 07:40:05] 2025-05-17 05:39:45,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 07:40:05] 2025-05-17 05:39:45,611 | INFO     | fitting pss+swap vs Time
[2025-05-17 07:40:05] 2025-05-17 05:39:45,611 | INFO     | sum of square deviations: 1154663510.0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,611 | INFO     | sum of deviations: 32833096341.000004
[2025-05-17 07:40:05] 2025-05-17 05:39:45,611 | INFO     | mean x: 1747455666.0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,611 | INFO     | mean y: 2239117.006451613
[2025-05-17 07:40:05] 2025-05-17 05:39:45,611 | INFO     | -- intersect: -49687025102.83914
[2025-05-17 07:40:05] 2025-05-17 05:39:45,611 | INFO     | intersect: -49687025102.83914
[2025-05-17 07:40:05] 2025-05-17 05:39:45,611 | INFO     | chi2: 3.2172564811127713
[2025-05-17 07:40:05] 2025-05-17 05:39:45,612 | INFO     | sum of square deviations: 1046484737.5
[2025-05-17 07:40:05] 2025-05-17 05:39:45,612 | INFO     | sum of deviations: 40303087929.50002
[2025-05-17 07:40:05] 2025-05-17 05:39:45,612 | INFO     | mean x: 1747455513.5
[2025-05-17 07:40:05] 2025-05-17 05:39:45,612 | INFO     | mean y: 2249332.62
[2025-05-17 07:40:05] 2025-05-17 05:39:45,612 | INFO     | -- intersect: -67297206349.580154
[2025-05-17 07:40:05] 2025-05-17 05:39:45,612 | INFO     | intersect: -67297206349.580154
[2025-05-17 07:40:05] 2025-05-17 05:39:45,612 | INFO     | chi2: 2.581844534043879
[2025-05-17 07:40:05] 2025-05-17 05:39:45,612 | INFO     | current chi2=2.581844534043879 (change=19.750117865925272 %)
[2025-05-17 07:40:05] 2025-05-17 05:39:45,612 | INFO     | right removable region: 149
[2025-05-17 07:40:05] 2025-05-17 05:39:45,612 | INFO     | sum of square deviations: 1046484737.5
[2025-05-17 07:40:05] 2025-05-17 05:39:45,613 | INFO     | sum of deviations: 4713957237.500009
[2025-05-17 07:40:05] 2025-05-17 05:39:45,613 | INFO     | mean x: 1747455818.5
[2025-05-17 07:40:05] 2025-05-17 05:39:45,613 | INFO     | mean y: 2278507.0733333332
[2025-05-17 07:40:05] 2025-05-17 05:39:45,613 | INFO     | -- intersect: -7869247667.793194
[2025-05-17 07:40:05] 2025-05-17 05:39:45,613 | INFO     | intersect: -7869247667.793194
[2025-05-17 07:40:05] 2025-05-17 05:39:45,613 | INFO     | chi2: 1.4379737786630655
[2025-05-17 07:40:05] 2025-05-17 05:39:45,613 | INFO     | current chi2=1.4379737786630655 (change=55.30434744308278 %)
[2025-05-17 07:40:05] 2025-05-17 05:39:45,613 | INFO     | sum of square deviations: 945282840.0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | sum of deviations: -14319804229.0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | mean x: 1747455971.0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | mean y: 2307192.324137931
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | -- intersect: 26473989893.68059
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | intersect: 26473989893.68059
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | chi2: 0.7255493688257557
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | current chi2=0.7255493688257557 (change=49.54363010010347 %)
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | sum of square deviations: 850825255.0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | sum of deviations: -9075796123.0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | mean x: 1747456123.5
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | mean y: 2298716.8285714285
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | -- intersect: 18642501763.89716
[2025-05-17 07:40:05] 2025-05-17 05:39:45,614 | INFO     | intersect: 18642501763.89716
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | chi2: 0.6864844823555332
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | current chi2=0.6864844823555332 (change=5.384180339574408 %)
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | left removable region: 30
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | sum of square deviations: 522502820.0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | sum of deviations: -348374660.0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | mean x: 1747456398.0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | mean y: 2311429.4285714286
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | -- intersect: 1167414286.7070732
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | intersect: 1167414286.7070732
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | chi2: 0.0048746629777906645
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | -- intersect: 1167414286.7070732
[2025-05-17 07:40:05] 2025-05-17 05:39:45,615 | INFO     | current memory leak: -0.67 B/s (using 119 data points, chi2=0.00)
[2025-05-17 07:40:05] 2025-05-17 05:39:45,616 | INFO     | ..............................
[2025-05-17 07:40:05] 2025-05-17 05:39:45,616 | INFO     | . Timing measurements:
[2025-05-17 07:40:05] 2025-05-17 05:39:45,616 | INFO     | . get job = 0 s
[2025-05-17 07:40:05] 2025-05-17 05:39:45,616 | INFO     | . initial setup = 1 s
[2025-05-17 07:40:05] 2025-05-17 05:39:45,616 | INFO     | . payload setup = 6 s
[2025-05-17 07:40:05] 2025-05-17 05:39:45,616 | INFO     | . stage-in = 0 s
[2025-05-17 07:40:05] 2025-05-17 05:39:45,616 | INFO     | . payload execution = 9406 s
[2025-05-17 07:40:05] 2025-05-17 05:39:45,616 | INFO     | . stage-out = 0 s
[2025-05-17 07:40:05] 2025-05-17 05:39:45,616 | INFO     | . log creation = 0 s
[2025-05-17 07:40:05] 2025-05-17 05:39:45,616 | INFO     | ..............................
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | 
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | job summary report
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | --------------------------------------------------
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | PanDA job id: 6651457263
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | task id: 44638099
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | errors: (none)
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | pilot state: finished 
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | transexitcode: 0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | exeerrorcode: 0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | exeerrordiag: 
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | exitcode: 0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | exitmsg: OK
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | cpuconsumptiontime: 17588 s
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | nevents: 400
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | neventsw: 0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | pid: 739258
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | pgrp: 739258
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | corecount: 2
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | event service: False
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | sizes: {0: 2393713, 6: 2393919, 10: 2393947, 9416: 2431178, 9418: 2431178, 9424: 2431348}
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | --------------------------------------------------
[2025-05-17 07:40:05] 2025-05-17 05:39:45,654 | INFO     | 
[2025-05-17 07:40:05] 2025-05-17 05:39:45,655 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 07:40:05] 2025-05-17 05:39:45,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 07:40:05] 2025-05-17 05:39:45,665 | INFO     | job 6651457263 has completed (purged errors)
[2025-05-17 07:40:05] 2025-05-17 05:39:45,665 | INFO     | overall cleanup function is called
[2025-05-17 07:40:05] 2025-05-17 05:39:46,671 | INFO     | --- collectZombieJob: --- 10, [739258]
[2025-05-17 07:40:05] 2025-05-17 05:39:46,671 | INFO     | zombie collector waiting for pid 739258
[2025-05-17 07:40:05] 2025-05-17 05:39:46,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 07:40:05] 2025-05-17 05:39:46,672 | INFO     | collected zombie processes
[2025-05-17 07:40:05] 2025-05-17 05:39:46,672 | INFO     | will attempt to kill all subprocesses of pid=739258
[2025-05-17 07:40:05] 2025-05-17 05:39:46,703 | INFO     | process IDs to be killed: [739258] (in reverse order)
[2025-05-17 07:40:05] 2025-05-17 05:39:46,722 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 07:40:05] 2025-05-17 05:39:46,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 07:40:05] 2025-05-17 05:39:46,723 | INFO     | did not find any defunct processes belonging to 739258
[2025-05-17 07:40:05] 2025-05-17 05:39:46,723 | INFO     | did not find any defunct processes belonging to 739258
[2025-05-17 07:40:05] 2025-05-17 05:39:46,723 | INFO     | ready for new job
[2025-05-17 07:40:05] 2025-05-17 05:39:46,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 07:40:05] 2025-05-17 05:39:46,724 | INFO     | **************************************
[2025-05-17 07:40:05] 2025-05-17 05:39:46,724 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 07:40:05] 2025-05-17 05:39:46,724 | INFO     | **************************************
[2025-05-17 07:40:05] 2025-05-17 05:39:46,724 | INFO     | 
[2025-05-17 07:40:05] 2025-05-17 05:39:46,724 | INFO     | architecture information:
[2025-05-17 07:40:05] 2025-05-17 05:39:46,724 | INFO     | executing command: cat /etc/os-release
[2025-05-17 07:40:05] 2025-05-17 05:39:46,732 | INFO     | cat /etc/os-release:
[2025-05-17 07:40:05] NAME="CentOS Linux"
[2025-05-17 07:40:05] VERSION="7 (Core)"
[2025-05-17 07:40:05] ID="centos"
[2025-05-17 07:40:05] ID_LIKE="rhel fedora"
[2025-05-17 07:40:05] VERSION_ID="7"
[2025-05-17 07:40:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 07:40:05] ANSI_COLOR="0;31"
[2025-05-17 07:40:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 07:40:05] HOME_URL="https://www.centos.org/"
[2025-05-17 07:40:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 07:40:05] 
[2025-05-17 07:40:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 07:40:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 07:40:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 07:40:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 07:40:05] 
[2025-05-17 07:40:05] 2025-05-17 05:39:46,732 | INFO     | **************************************
[2025-05-17 07:40:05] 2025-05-17 05:39:47,235 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-17 07:40:05] 2025-05-17 05:39:47,246 | INFO     | sufficient remaining disk space (835761209344 B)
[2025-05-17 07:40:05] 2025-05-17 05:39:47,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 07:40:05] 2025-05-17 05:39:47,246 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 07:40:05] 2025-05-17 05:39:47,246 | INFO     | update_server=False
[2025-05-17 07:40:05] 2025-05-17 05:39:47,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 07:40:05] 2025-05-17 05:39:47,246 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 07:40:05] 2025-05-17 05:39:47,247 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 07:40:05] 2025-05-17 05:39:47,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 07:40:05] 2025-05-17 05:39:47,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 07:40:05] 2025-05-17 05:39:47,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 07:40:05] 2025-05-17 05:39:47,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 07:40:05] 2025-05-17 05:39:47,247 | INFO     | aborting loop
[2025-05-17 07:40:05] 2025-05-17 05:39:47,517 | INFO     | all data control threads have been joined
[2025-05-17 07:40:05] 2025-05-17 05:39:47,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 07:40:05] 2025-05-17 05:39:48,080 | INFO     | all payload control threads have been joined
[2025-05-17 07:40:05] 2025-05-17 05:39:48,246 | INFO     | all job control threads have been joined
[2025-05-17 07:40:05] 2025-05-17 05:39:48,252 | INFO     | [job] retrieve thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:48,253 | INFO     | [job] job monitor thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:48,253 | INFO     | [job] queue monitor thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:48,523 | INFO     | [data] control thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:48,545 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:49,086 | INFO     | [payload] control thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:49,252 | INFO     | [job] control thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:49,277 | INFO     | [payload] validate_post thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:49,421 | INFO     | [job] validate thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:49,477 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:49,508 | INFO     | [data] copytool_in thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:49,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 07:40:05] 2025-05-17 05:39:49,630 | INFO     | [payload] failed_post thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:49,711 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:49,900 | INFO     | [data] copytool_out thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:53,598 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:39:58,057 | INFO     | job.realtimelogging is not enabled
[2025-05-17 07:40:05] 2025-05-17 05:39:59,063 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 07:40:05] 2025-05-17 05:40:00,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335286667072)>', '<ExcThread(monitor, started 140334935815936)>']
[2025-05-17 07:40:05] 2025-05-17 05:40:01,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 07:40:05] 2025-05-17 05:40:01,323 | INFO     | [monitor] control thread has ended
[2025-05-17 07:40:05] 2025-05-17 05:40:05,410 | INFO     | all workflow threads have been joined
[2025-05-17 07:40:05] 2025-05-17 05:40:05,411 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 07:40:05] 2025-05-17 05:40:05,411 | INFO     | traces error code: 0
[2025-05-17 07:40:05] 2025-05-17 05:40:05,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 07:40:05] 2025-05-17 05:40:05,452 [wrapper] ==== pilot stdout END ====
[2025-05-17 07:40:05] 2025-05-17 05:40:05,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 07:40:05] 2025-05-17 05:40:05,457 [wrapper] pilotpid: 732843
[2025-05-17 07:40:05] 2025-05-17 05:40:05,459 [wrapper] Pilot exit status: 0
[2025-05-17 07:40:05] 2025-05-17 05:40:05,464 [wrapper] pandaids: 6651457263
[2025-05-17 07:40:05] 2025-05-17 05:40:05,475 [wrapper] cleanup supervisor_pilot  756765 732844
[2025-05-17 07:40:05] 2025-05-17 05:40:05,477 [wrapper] Test setup, not cleaning
[2025-05-17 07:40:05] 2025-05-17 05:40:05,479 [wrapper] apfmon messages muted
[2025-05-17 07:40:05] 2025-05-17 05:40:05,481 [wrapper] ==== wrapper stdout END ====
[2025-05-17 07:40:05] 2025-05-17 05:40:05,483 [wrapper] ==== wrapper stderr END ====
[2025-05-17 07:40:05]  *** Error codes and diagnostics ***
[2025-05-17 07:40:05]     "exeErrorCode": 0,
[2025-05-17 07:40:05]     "exeErrorDiag": "",
[2025-05-17 07:40:05]     "pilotErrorCode": 0,
[2025-05-17 07:40:05]     "pilotErrorDiag": "",
[2025-05-17 07:40:05]  *** Listing of results directory ***
[2025-05-17 07:40:05] total 410280
[2025-05-17 07:40:05] -rwx------ 1 boinc boinc     37140 May 16 10:28 runpilot2-wrapper.sh
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc      5111 May 16 10:28 queuedata.json
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc    495897 May 16 10:28 pilot3.tar.gz
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc       100 May 17 05:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 07:40:05] -rwxr-xr-x 1 boinc boinc      7986 May 17 05:02 run_atlas
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc       105 May 17 05:02 job.xml
[2025-05-17 07:40:05] -rw-r--r-- 2 boinc boinc 222647715 May 17 05:02 EVNT.44638096._000505.pool.root.1
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc      6689 May 17 05:02 init_data.xml
[2025-05-17 07:40:05] drwxrwx--x 2 boinc boinc      4096 May 17 05:02 shared
[2025-05-17 07:40:05] -rw-r--r-- 2 boinc boinc    508870 May 17 05:02 input.tar.gz
[2025-05-17 07:40:05] -rw-r--r-- 2 boinc boinc     17569 May 17 05:02 start_atlas.sh
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc         0 May 17 05:02 boinc_lockfile
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc      2538 May 17 05:02 pandaJob.out
[2025-05-17 07:40:05] -rw------- 1 boinc boinc       424 May 17 05:02 setup.sh.local
[2025-05-17 07:40:05] -rw------- 1 boinc boinc    994643 May 17 05:02 agis_schedconf.cvmfs.json
[2025-05-17 07:40:05] -rw------- 1 boinc boinc   1596741 May 17 05:02 agis_ddmendpoints.agis.ALL.json
[2025-05-17 07:40:05] drwx------ 4 boinc boinc      4096 May 17 05:02 pilot3
[2025-05-17 07:40:05] -rw------- 1 boinc boinc        95 May 17 07:39 pilot_heartbeat.json
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc       529 May 17 07:39 boinc_task_state.xml
[2025-05-17 07:40:05] -rw------- 1 boinc boinc 191363711 May 17 07:39 HITS.44638099._037258.pool.root.1
[2025-05-17 07:40:05] -rw------- 1 boinc boinc      1017 May 17 07:39 memory_monitor_summary.json
[2025-05-17 07:40:05] -rw------- 1 boinc boinc    253468 May 17 07:39 log.44638099._037258.job.log.tgz.1
[2025-05-17 07:40:05] -rw------- 1 boinc boinc      7650 May 17 07:39 heartbeat.json
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc      8192 May 17 07:40 boinc_mmap_file
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc        27 May 17 07:40 wrapper_checkpoint.txt
[2025-05-17 07:40:05] -rw------- 1 boinc boinc      4552 May 17 07:40 pilotlog.txt
[2025-05-17 07:40:05] -rw------- 1 boinc boinc    882495 May 17 07:40 log.44638099._037258.job.log.1
[2025-05-17 07:40:05] -rw------- 1 boinc boinc       357 May 17 07:40 output.list
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc       620 May 17 07:40 runtime_log
[2025-05-17 07:40:05] -rw------- 1 boinc boinc   1157120 May 17 07:40 result.tar.gz
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc     11099 May 17 07:40 runtime_log.err
[2025-05-17 07:40:05] -rw------- 1 boinc boinc       659 May 17 07:40 NaHKDmXb5Z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPULKDmI5oKSn.diag
[2025-05-17 07:40:05] -rw-r--r-- 1 boinc boinc     20720 May 17 07:40 stderr.txt
[2025-05-17 07:40:05] HITS file was successfully produced:
[2025-05-17 07:40:05] -rw------- 1 boinc boinc 191363711 May 17 07:39 shared/HITS.pool.root.1
[2025-05-17 07:40:05]  *** Contents of shared directory: ***
[2025-05-17 07:40:05] total 405968
[2025-05-17 07:40:05] -rw-r--r-- 2 boinc boinc 222647715 May 17 05:02 ATLAS.root_0
[2025-05-17 07:40:05] -rw-r--r-- 2 boinc boinc    508870 May 17 05:02 input.tar.gz
[2025-05-17 07:40:05] -rw-r--r-- 2 boinc boinc     17569 May 17 05:02 start_atlas.sh
[2025-05-17 07:40:05] -rw------- 1 boinc boinc 191363711 May 17 07:39 HITS.pool.root.1
[2025-05-17 07:40:05] -rw------- 1 boinc boinc   1157120 May 17 07:40 result.tar.gz
07:40:07 (729211): run_atlas exited; CPU time 17628.531730
07:40:07 (729211): called boinc_finish(0)

</stderr_txt>
]]>

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