Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:48:06 (31992): wrapper (7.7.26015): starting
00:48:06 (31992): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 00:48:06] Arguments: --nthreads 8
[2025-05-17 00:48:06] Threads: 8
[2025-05-17 00:48:06] Checking for CVMFS
[2025-05-17 00:48:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 00:48:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 00:48:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 00:48:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 00:48:08] 2.11.2.0 26199 6464 90980 146080 3 59 22862523 25165825 4667 130560 0 5198692 99.782 6644275 1015 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-17 00:48:08] CVMFS is ok
[2025-05-17 00:48:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 00:48:08] Checking for apptainer binary...
[2025-05-17 00:48:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 00:48:08] Running /usr/bin/apptainer --version
[2025-05-17 00:48:08] apptainer version 1.3.2-1.el7
[2025-05-17 00:48:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 00:48:11] cg-vwn248.simple-grid.lan
[2025-05-17 00:48:11] apptainer works
[2025-05-17 00:48:11] Set ATHENA_PROC_NUMBER=8
[2025-05-17 00:48:11] Set ATHENA_CORE_NUMBER=8
[2025-05-17 00:48:11] Starting ATLAS job with PandaID=6651637562
[2025-05-17 00:48:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 06:14:30]  *** The last 200 lines of the pilot log: ***
[2025-05-17 06:14:30] 2025-05-17 04:14:15,901 | INFO     | mean y: 2423117.908196721
[2025-05-17 06:14:30] 2025-05-17 04:14:15,901 | INFO     | -- intersect: -48351485238.40567
[2025-05-17 06:14:30] 2025-05-17 04:14:15,901 | INFO     | intersect: -48351485238.40567
[2025-05-17 06:14:30] 2025-05-17 04:14:15,902 | INFO     | chi2: 8.281733737717277
[2025-05-17 06:14:30] 2025-05-17 04:14:15,902 | INFO     | current chi2=8.281733737717277 (change=8.177142454864219 %)
[2025-05-17 06:14:30] 2025-05-17 04:14:15,902 | INFO     | right removable region: 304
[2025-05-17 06:14:30] 2025-05-17 04:14:15,903 | INFO     | sum of square deviations: 8797783560.0
[2025-05-17 06:14:30] 2025-05-17 04:14:15,906 | INFO     | sum of deviations: 121970407375.00002
[2025-05-17 06:14:30] 2025-05-17 04:14:15,906 | INFO     | mean x: 1747445936.0
[2025-05-17 06:14:30] 2025-05-17 04:14:15,906 | INFO     | mean y: 2453601.1213114755
[2025-05-17 06:14:30] 2025-05-17 04:14:15,907 | INFO     | -- intersect: -24223726916.52127
[2025-05-17 06:14:30] 2025-05-17 04:14:15,907 | INFO     | intersect: -24223726916.52127
[2025-05-17 06:14:30] 2025-05-17 04:14:15,907 | INFO     | chi2: 4.344892713962853
[2025-05-17 06:14:30] 2025-05-17 04:14:15,907 | INFO     | current chi2=4.344892713962853 (change=51.82645598636738 %)
[2025-05-17 06:14:30] 2025-05-17 04:14:15,908 | INFO     | sum of square deviations: 8372156975.0
[2025-05-17 06:14:30] 2025-05-17 04:14:15,911 | INFO     | sum of deviations: 53272957064.99998
[2025-05-17 06:14:30] 2025-05-17 04:14:15,911 | INFO     | mean x: 1747446088.5
[2025-05-17 06:14:30] 2025-05-17 04:14:15,911 | INFO     | mean y: 2478186.1266666665
[2025-05-17 06:14:30] 2025-05-17 04:14:15,911 | INFO     | -- intersect: -11116713764.531025
[2025-05-17 06:14:30] 2025-05-17 04:14:15,912 | INFO     | intersect: -11116713764.531025
[2025-05-17 06:14:30] 2025-05-17 04:14:15,912 | INFO     | chi2: 2.435978082894907
[2025-05-17 06:14:30] 2025-05-17 04:14:15,912 | INFO     | current chi2=2.435978082894907 (change=43.93467817820706 %)
[2025-05-17 06:14:30] 2025-05-17 04:14:15,913 | INFO     | sum of square deviations: 7960484140.0
[2025-05-17 06:14:30] 2025-05-17 04:14:15,916 | INFO     | sum of deviations: -2172651823.000004
[2025-05-17 06:14:30] 2025-05-17 04:14:15,916 | INFO     | mean x: 1747446241.0
[2025-05-17 06:14:30] 2025-05-17 04:14:15,916 | INFO     | mean y: 2498726.091525424
[2025-05-17 06:14:30] 2025-05-17 04:14:15,916 | INFO     | -- intersect: 479428545.2247564
[2025-05-17 06:14:30] 2025-05-17 04:14:15,917 | INFO     | intersect: 479428545.2247564
[2025-05-17 06:14:30] 2025-05-17 04:14:15,917 | INFO     | chi2: 1.221206415831347
[2025-05-17 06:14:30] 2025-05-17 04:14:15,917 | INFO     | current chi2=1.221206415831347 (change=49.867922687544464 %)
[2025-05-17 06:14:30] 2025-05-17 04:14:15,918 | INFO     | sum of square deviations: 7562532492.5
[2025-05-17 06:14:30] 2025-05-17 04:14:15,921 | INFO     | sum of deviations: -29987881118.5
[2025-05-17 06:14:30] 2025-05-17 04:14:15,921 | INFO     | mean x: 1747446393.5
[2025-05-17 06:14:30] 2025-05-17 04:14:15,921 | INFO     | mean y: 2509341.651724138
[2025-05-17 06:14:30] 2025-05-17 04:14:15,921 | INFO     | -- intersect: 6931698044.139745
[2025-05-17 06:14:30] 2025-05-17 04:14:15,921 | INFO     | intersect: 6931698044.139745
[2025-05-17 06:14:30] 2025-05-17 04:14:15,922 | INFO     | chi2: 0.8280466153984998
[2025-05-17 06:14:30] 2025-05-17 04:14:15,922 | INFO     | current chi2=0.8280466153984998 (change=32.19437724335899 %)
[2025-05-17 06:14:30] 2025-05-17 04:14:15,923 | INFO     | sum of square deviations: 7178069470.0
[2025-05-17 06:14:30] 2025-05-17 04:14:15,925 | INFO     | sum of deviations: -34003618692.0
[2025-05-17 06:14:30] 2025-05-17 04:14:15,926 | INFO     | mean x: 1747446546.0
[2025-05-17 06:14:30] 2025-05-17 04:14:15,926 | INFO     | mean y: 2510918.7228070176
[2025-05-17 06:14:30] 2025-05-17 04:14:15,926 | INFO     | -- intersect: 8280433873.24061
[2025-05-17 06:14:30] 2025-05-17 04:14:15,926 | INFO     | intersect: 8280433873.24061
[2025-05-17 06:14:30] 2025-05-17 04:14:15,926 | INFO     | chi2: 0.807597530771677
[2025-05-17 06:14:30] 2025-05-17 04:14:15,927 | INFO     | current chi2=0.807597530771677 (change=2.4695571778868564 %)
[2025-05-17 06:14:30] 2025-05-17 04:14:15,927 | INFO     | left removable region: 50
[2025-05-17 06:14:30] 2025-05-17 04:14:15,927 | INFO     | sum of square deviations: 5081276667.5
[2025-05-17 06:14:30] 2025-05-17 04:14:15,930 | INFO     | sum of deviations: -10534092257.000002
[2025-05-17 06:14:30] 2025-05-17 04:14:15,930 | INFO     | mean x: 1747447125.5
[2025-05-17 06:14:30] 2025-05-17 04:14:15,930 | INFO     | mean y: 2517064.590551181
[2025-05-17 06:14:30] 2025-05-17 04:14:15,930 | INFO     | -- intersect: 3625183264.205918
[2025-05-17 06:14:30] 2025-05-17 04:14:15,930 | INFO     | intersect: 3625183264.205918
[2025-05-17 06:14:30] 2025-05-17 04:14:15,931 | INFO     | chi2: 0.0114542608546338
[2025-05-17 06:14:30] 2025-05-17 04:14:15,931 | INFO     | -- intersect: 3625183264.205918
[2025-05-17 06:14:30] 2025-05-17 04:14:15,931 | INFO     | current memory leak: -2.07 B/s (using 254 data points, chi2=0.01)
[2025-05-17 06:14:30] 2025-05-17 04:14:15,932 | INFO     | ..............................
[2025-05-17 06:14:30] 2025-05-17 04:14:15,932 | INFO     | . Timing measurements:
[2025-05-17 06:14:30] 2025-05-17 04:14:15,932 | INFO     | . get job = 0 s
[2025-05-17 06:14:30] 2025-05-17 04:14:15,932 | INFO     | . initial setup = 3 s
[2025-05-17 06:14:30] 2025-05-17 04:14:15,933 | INFO     | . payload setup = 125 s
[2025-05-17 06:14:30] 2025-05-17 04:14:15,933 | INFO     | . stage-in = 0 s
[2025-05-17 06:14:30] 2025-05-17 04:14:15,933 | INFO     | . payload execution = 19033 s
[2025-05-17 06:14:30] 2025-05-17 04:14:15,933 | INFO     | . stage-out = 1 s
[2025-05-17 06:14:30] 2025-05-17 04:14:15,933 | INFO     | . log creation = 0 s
[2025-05-17 06:14:30] 2025-05-17 04:14:15,933 | INFO     | ..............................
[2025-05-17 06:14:30] 2025-05-17 04:14:16,063 | INFO     | 
[2025-05-17 06:14:30] 2025-05-17 04:14:16,063 | INFO     | job summary report
[2025-05-17 06:14:30] 2025-05-17 04:14:16,063 | INFO     | --------------------------------------------------
[2025-05-17 06:14:30] 2025-05-17 04:14:16,063 | INFO     | PanDA job id: 6651637562
[2025-05-17 06:14:30] 2025-05-17 04:14:16,063 | INFO     | task id: 44638099
[2025-05-17 06:14:30] 2025-05-17 04:14:16,063 | INFO     | errors: (none)
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | pilot state: finished 
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | transexitcode: 0
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | exeerrorcode: 0
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | exeerrordiag: 
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | exitcode: 0
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | exitmsg: OK
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | cpuconsumptiontime: 69169 s
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | nevents: 400
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | neventsw: 0
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | pid: 10156
[2025-05-17 06:14:30] 2025-05-17 04:14:16,064 | INFO     | pgrp: 10156
[2025-05-17 06:14:30] 2025-05-17 04:14:16,065 | INFO     | corecount: 8
[2025-05-17 06:14:30] 2025-05-17 04:14:16,065 | INFO     | event service: False
[2025-05-17 06:14:30] 2025-05-17 04:14:16,065 | INFO     | sizes: {0: 2393541, 1: 2393740, 2: 2393768, 12: 2393768, 23: 2393796, 34: 2393824, 45: 2393980, 55: 2394008, 66: 2394036, 77: 2394064, 88: 2394120, 91: 2394634, 98
[2025-05-17 06:14:30] 2025-05-17 04:14:16,065 | INFO     | --------------------------------------------------
[2025-05-17 06:14:30] 2025-05-17 04:14:16,065 | INFO     | 
[2025-05-17 06:14:30] 2025-05-17 04:14:16,065 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-05-17 06:14:30] 2025-05-17 04:14:16,115 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,116 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,116 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,116 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,116 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,116 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,116 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,116 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 06:14:30] 2025-05-17 04:14:16,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 06:14:30] 2025-05-17 04:14:16,118 | INFO     | job 6651637562 has completed (purged errors)
[2025-05-17 06:14:30] 2025-05-17 04:14:16,118 | INFO     | overall cleanup function is called
[2025-05-17 06:14:30] 2025-05-17 04:14:17,128 | INFO     | --- collectZombieJob: --- 10, [10156]
[2025-05-17 06:14:30] 2025-05-17 04:14:17,128 | INFO     | zombie collector waiting for pid 10156
[2025-05-17 06:14:30] 2025-05-17 04:14:17,128 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 06:14:30] 2025-05-17 04:14:17,129 | INFO     | collected zombie processes
[2025-05-17 06:14:30] 2025-05-17 04:14:17,129 | INFO     | will attempt to kill all subprocesses of pid=10156
[2025-05-17 06:14:30] 2025-05-17 04:14:17,224 | INFO     | process IDs to be killed: [10156] (in reverse order)
[2025-05-17 06:14:30] 2025-05-17 04:14:17,500 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 06:14:30] 2025-05-17 04:14:17,501 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 06:14:30] 2025-05-17 04:14:17,504 | INFO     | did not find any defunct processes belonging to 10156
[2025-05-17 06:14:30] 2025-05-17 04:14:17,507 | INFO     | did not find any defunct processes belonging to 10156
[2025-05-17 06:14:30] 2025-05-17 04:14:17,509 | INFO     | ready for new job
[2025-05-17 06:14:30] 2025-05-17 04:14:17,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 06:14:30] 2025-05-17 04:14:17,512 | INFO     | **************************************
[2025-05-17 06:14:30] 2025-05-17 04:14:17,512 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 06:14:30] 2025-05-17 04:14:17,512 | INFO     | **************************************
[2025-05-17 06:14:30] 2025-05-17 04:14:17,512 | INFO     | 
[2025-05-17 06:14:30] 2025-05-17 04:14:17,513 | INFO     | pilot is running in a VM
[2025-05-17 06:14:30] 2025-05-17 04:14:17,513 | INFO     | architecture information:
[2025-05-17 06:14:30] 2025-05-17 04:14:17,513 | INFO     | executing command: cat /etc/os-release
[2025-05-17 06:14:30] 2025-05-17 04:14:17,582 | INFO     | cat /etc/os-release:
[2025-05-17 06:14:30] NAME="CentOS Linux"
[2025-05-17 06:14:30] VERSION="7 (Core)"
[2025-05-17 06:14:30] ID="centos"
[2025-05-17 06:14:30] ID_LIKE="rhel fedora"
[2025-05-17 06:14:30] VERSION_ID="7"
[2025-05-17 06:14:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 06:14:30] ANSI_COLOR="0;31"
[2025-05-17 06:14:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 06:14:30] HOME_URL="https://www.centos.org/"
[2025-05-17 06:14:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 06:14:30] 
[2025-05-17 06:14:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 06:14:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 06:14:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 06:14:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 06:14:30] 
[2025-05-17 06:14:30] 2025-05-17 04:14:17,583 | INFO     | **************************************
[2025-05-17 06:14:30] 2025-05-17 04:14:18,086 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-05-17 06:14:30] 2025-05-17 04:14:18,122 | INFO     | sufficient remaining disk space (496761831424 B)
[2025-05-17 06:14:30] 2025-05-17 04:14:18,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 06:14:30] 2025-05-17 04:14:18,122 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 06:14:30] 2025-05-17 04:14:18,122 | INFO     | update_server=False
[2025-05-17 06:14:30] 2025-05-17 04:14:18,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 06:14:30] 2025-05-17 04:14:18,123 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 06:14:30] 2025-05-17 04:14:18,123 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 06:14:30] 2025-05-17 04:14:18,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 06:14:30] 2025-05-17 04:14:18,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 06:14:30] 2025-05-17 04:14:18,259 | INFO     | all data control threads have been joined
[2025-05-17 06:14:30] 2025-05-17 04:14:18,378 | INFO     | all payload control threads have been joined
[2025-05-17 06:14:30] 2025-05-17 04:14:18,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 06:14:30] 2025-05-17 04:14:18,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 06:14:30] 2025-05-17 04:14:19,082 | INFO     | all job control threads have been joined
[2025-05-17 06:14:30] 2025-05-17 04:14:19,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 06:14:30] 2025-05-17 04:14:19,118 | INFO     | aborting loop
[2025-05-17 06:14:30] 2025-05-17 04:14:19,128 | INFO     | [job] retrieve thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:19,265 | INFO     | [data] control thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:19,336 | INFO     | [payload] failed_post thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:19,384 | INFO     | [payload] control thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:19,580 | INFO     | [job] validate thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:19,583 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:19,595 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:20,088 | INFO     | [job] control thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:20,123 | INFO     | [job] job monitor thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:20,205 | INFO     | [data] copytool_in thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:20,327 | INFO     | [payload] validate_post thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:20,388 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:20,480 | INFO     | [data] copytool_out thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:20,567 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:21,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 06:14:30] 2025-05-17 04:14:22,083 | INFO     | [job] queue monitor thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:22,971 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 06:14:30] 2025-05-17 04:14:24,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187449169728)>', '<ExcThread(monitor, started 140187145312000)>']
[2025-05-17 06:14:30] 2025-05-17 04:14:25,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 06:14:30] 2025-05-17 04:14:25,164 | INFO     | [monitor] control thread has ended
[2025-05-17 06:14:30] 2025-05-17 04:14:29,853 | INFO     | all workflow threads have been joined
[2025-05-17 06:14:30] 2025-05-17 04:14:29,853 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 06:14:30] 2025-05-17 04:14:29,854 | INFO     | traces error code: 0
[2025-05-17 06:14:30] 2025-05-17 04:14:29,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 06:14:30] 2025-05-17 04:14:30,104 [wrapper] ==== pilot stdout END ====
[2025-05-17 06:14:30] 2025-05-17 04:14:30,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 06:14:30] 2025-05-17 04:14:30,164 [wrapper] pilotpid: 3625
[2025-05-17 06:14:30] 2025-05-17 04:14:30,178 [wrapper] Pilot exit status: 0
[2025-05-17 06:14:30] 2025-05-17 04:14:30,202 [wrapper] pandaids: 6651637562
[2025-05-17 06:14:30] 2025-05-17 04:14:30,241 [wrapper] cleanup supervisor_pilot 16570 3626
[2025-05-17 06:14:30] 2025-05-17 04:14:30,252 [wrapper] Test setup, not cleaning
[2025-05-17 06:14:30] 2025-05-17 04:14:30,264 [wrapper] apfmon messages muted
[2025-05-17 06:14:30] 2025-05-17 04:14:30,267 [wrapper] ==== wrapper stdout END ====
[2025-05-17 06:14:30] 2025-05-17 04:14:30,273 [wrapper] ==== wrapper stderr END ====
[2025-05-17 06:14:30]  *** Error codes and diagnostics ***
[2025-05-17 06:14:30]     "exeErrorCode": 0,
[2025-05-17 06:14:30]     "exeErrorDiag": "",
[2025-05-17 06:14:30]     "pilotErrorCode": 0,
[2025-05-17 06:14:30]     "pilotErrorDiag": "",
[2025-05-17 06:14:30]  *** Listing of results directory ***
[2025-05-17 06:14:30] total 413964
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc    495897 May 16 12:45 pilot3.tar.gz
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc      5111 May 16 12:48 queuedata.json
[2025-05-17 06:14:30] -rwx------. 1 boinc boinc     37140 May 16 12:51 runpilot2-wrapper.sh
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc       100 May 17 00:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 06:14:30] -rwxr-xr-x. 1 boinc boinc      7986 May 17 00:48 run_atlas
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc       105 May 17 00:48 job.xml
[2025-05-17 06:14:30] -rw-r--r--. 2 boinc boinc 220072741 May 17 00:48 EVNT.44638096._000724.pool.root.1
[2025-05-17 06:14:30] -rw-r--r--. 2 boinc boinc     17569 May 17 00:48 start_atlas.sh
[2025-05-17 06:14:30] drwxrwx--x. 2 boinc boinc        68 May 17 00:48 shared
[2025-05-17 06:14:30] -rw-r--r--. 2 boinc boinc    508876 May 17 00:48 input.tar.gz
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc      6373 May 17 00:48 init_data.xml
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc         0 May 17 00:48 boinc_lockfile
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc      2539 May 17 00:48 pandaJob.out
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc       424 May 17 00:48 setup.sh.local
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc    994643 May 17 00:51 agis_schedconf.cvmfs.json
[2025-05-17 06:14:30] drwx------. 4 boinc boinc      4096 May 17 00:51 pilot3
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc 195842836 May 17 06:13 HITS.44638099._038926.pool.root.1
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc       531 May 17 06:13 boinc_task_state.xml
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc      1019 May 17 06:13 memory_monitor_summary.json
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc   1596741 May 17 06:13 agis_ddmendpoints.agis.ALL.json
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc    425041 May 17 06:13 log.44638099._038926.job.log.tgz.1
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc        95 May 17 06:14 pilot_heartbeat.json
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc      7690 May 17 06:14 heartbeat.json
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc      8192 May 17 06:14 boinc_mmap_file
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc        28 May 17 06:14 wrapper_checkpoint.txt
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc      4540 May 17 06:14 pilotlog.txt
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc   1650163 May 17 06:14 log.44638099._038926.job.log.1
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc       357 May 17 06:14 output.list
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc       620 May 17 06:14 runtime_log
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc   2099200 May 17 06:14 result.tar.gz
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc       656 May 17 06:14 YmvMDmsp7Z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9mLKDmsOWfZn.diag
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc     11031 May 17 06:14 runtime_log.err
[2025-05-17 06:14:30] -rw-r--r--. 1 boinc boinc     20496 May 17 06:14 stderr.txt
[2025-05-17 06:14:30] HITS file was successfully produced:
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc 195842836 May 17 06:13 shared/HITS.pool.root.1
[2025-05-17 06:14:30]  *** Contents of shared directory: ***
[2025-05-17 06:14:30] total 408744
[2025-05-17 06:14:30] -rw-r--r--. 2 boinc boinc 220072741 May 17 00:48 ATLAS.root_0
[2025-05-17 06:14:30] -rw-r--r--. 2 boinc boinc     17569 May 17 00:48 start_atlas.sh
[2025-05-17 06:14:30] -rw-r--r--. 2 boinc boinc    508876 May 17 00:48 input.tar.gz
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc 195842836 May 17 06:13 HITS.pool.root.1
[2025-05-17 06:14:30] -rw-------. 1 boinc boinc   2099200 May 17 06:14 result.tar.gz
06:14:32 (31992): run_atlas exited; CPU time 69434.708191
06:14:32 (31992): called boinc_finish(0)

</stderr_txt>
]]>

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