Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:13:19 (2016987): wrapper (7.7.26015): starting
09:13:19 (2016987): wrapper: running run_atlas (--nthreads 8)
[2025-05-16 09:13:19] Arguments: --nthreads 8
[2025-05-16 09:13:19] Threads: 8
[2025-05-16 09:13:19] Checking for CVMFS
[2025-05-16 09:13:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 09:13:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 09:13:20] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 09:13:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 09:13:20] 2.12.6.0 872076 5484 258324 146064 0 195 32706866 40960001 21467 16776704 1 16067262 99.471 24709288 27177 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-16 09:13:20] CVMFS is ok
[2025-05-16 09:13:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 09:13:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 09:13:20] Further information can be found at the LHC@home message board.
[2025-05-16 09:13:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 09:13:20] Checking for apptainer binary...
[2025-05-16 09:13:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 09:13:20] Running /usr/bin/apptainer --version
[2025-05-16 09:13:21] apptainer version 1.4.0-1.el9
[2025-05-16 09:13:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 09:13:21] c7-11-12.aglt2.org
[2025-05-16 09:13:21] apptainer works
[2025-05-16 09:13:21] Set ATHENA_PROC_NUMBER=8
[2025-05-16 09:13:21] Set ATHENA_CORE_NUMBER=8
[2025-05-16 09:13:21] Starting ATLAS job with PandaID=6651234874
[2025-05-16 09:13:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 13:16:33]  *** The last 200 lines of the pilot log: ***
[2025-05-16 13:16:33] 2025-05-16 17:16:12,118 | INFO     | mean x: 1747408366.9267242
[2025-05-16 13:16:33] 2025-05-16 17:16:12,118 | INFO     | mean y: 2069021.7543103448
[2025-05-16 13:16:33] 2025-05-16 17:16:12,118 | INFO     | -- intersect: -40574736402.37027
[2025-05-16 13:16:33] 2025-05-16 17:16:12,118 | INFO     | intersect: -40574736402.37027
[2025-05-16 13:16:33] 2025-05-16 17:16:12,118 | INFO     | chi2: 3.3659177047661357
[2025-05-16 13:16:33] 2025-05-16 17:16:12,119 | INFO     | current chi2=3.3659177047661357 (change=0.6589304529821172 %)
[2025-05-16 13:16:33] 2025-05-16 17:16:12,119 | INFO     | right removable region: 231
[2025-05-16 13:16:33] 2025-05-16 17:16:12,119 | INFO     | sum of square deviations: 3872013438.03017
[2025-05-16 13:16:33] 2025-05-16 17:16:12,120 | INFO     | sum of deviations: 44478131523.827515
[2025-05-16 13:16:33] 2025-05-16 17:16:12,120 | INFO     | mean x: 1747408671.935345
[2025-05-16 13:16:33] 2025-05-16 17:16:12,120 | INFO     | mean y: 2096555.6551724137
[2025-05-16 13:16:33] 2025-05-16 17:16:12,120 | INFO     | -- intersect: -20070528185.99776
[2025-05-16 13:16:33] 2025-05-16 17:16:12,120 | INFO     | intersect: -20070528185.99776
[2025-05-16 13:16:33] 2025-05-16 17:16:12,121 | INFO     | chi2: 1.2134130349904706
[2025-05-16 13:16:33] 2025-05-16 17:16:12,121 | INFO     | current chi2=1.2134130349904706 (change=64.18755321095361 %)
[2025-05-16 13:16:33] 2025-05-16 17:16:12,121 | INFO     | sum of square deviations: 3627005899.947155
[2025-05-16 13:16:33] 2025-05-16 17:16:12,122 | INFO     | sum of deviations: 17278954120.18943
[2025-05-16 13:16:33] 2025-05-16 17:16:12,122 | INFO     | mean x: 1747408824.4405286
[2025-05-16 13:16:33] 2025-05-16 17:16:12,122 | INFO     | mean y: 2113492.088105727
[2025-05-16 13:16:33] 2025-05-16 17:16:12,122 | INFO     | -- intersect: -8322493012.456581
[2025-05-16 13:16:33] 2025-05-16 17:16:12,122 | INFO     | intersect: -8322493012.456581
[2025-05-16 13:16:33] 2025-05-16 17:16:12,123 | INFO     | chi2: 0.5522633338271506
[2025-05-16 13:16:33] 2025-05-16 17:16:12,123 | INFO     | current chi2=0.5522633338271506 (change=54.48678084857661 %)
[2025-05-16 13:16:33] 2025-05-16 17:16:12,123 | INFO     | sum of square deviations: 3392556699.351357
[2025-05-16 13:16:33] 2025-05-16 17:16:12,124 | INFO     | sum of deviations: -148471543.64864922
[2025-05-16 13:16:33] 2025-05-16 17:16:12,124 | INFO     | mean x: 1747408976.945946
[2025-05-16 13:16:33] 2025-05-16 17:16:12,124 | INFO     | mean y: 2124748.1126126125
[2025-05-16 13:16:33] 2025-05-16 17:16:12,124 | INFO     | -- intersect: 78598196.07068962
[2025-05-16 13:16:33] 2025-05-16 17:16:12,124 | INFO     | intersect: 78598196.07068962
[2025-05-16 13:16:33] 2025-05-16 17:16:12,125 | INFO     | chi2: 0.16732689949976837
[2025-05-16 13:16:33] 2025-05-16 17:16:12,125 | INFO     | current chi2=0.16732689949976837 (change=69.70160985698556 %)
[2025-05-16 13:16:33] 2025-05-16 17:16:12,125 | INFO     | sum of square deviations: 3168473899.4101315
[2025-05-16 13:16:33] 2025-05-16 17:16:12,126 | INFO     | sum of deviations: -4973104475.184332
[2025-05-16 13:16:33] 2025-05-16 17:16:12,126 | INFO     | mean x: 1747409129.437788
[2025-05-16 13:16:33] 2025-05-16 17:16:12,126 | INFO     | mean y: 2127986.949308756
[2025-05-16 13:16:33] 2025-05-16 17:16:12,126 | INFO     | -- intersect: 2744788471.923741
[2025-05-16 13:16:33] 2025-05-16 17:16:12,126 | INFO     | intersect: 2744788471.923741
[2025-05-16 13:16:33] 2025-05-16 17:16:12,126 | INFO     | chi2: 0.10216857595862132
[2025-05-16 13:16:33] 2025-05-16 17:16:12,127 | INFO     | current chi2=0.10216857595862132 (change=38.94073441624803 %)
[2025-05-16 13:16:33] 2025-05-16 17:16:12,127 | INFO     | sum of square deviations: 2954471195.075466
[2025-05-16 13:16:33] 2025-05-16 17:16:12,128 | INFO     | sum of deviations: -5024491803.915092
[2025-05-16 13:16:33] 2025-05-16 17:16:12,128 | INFO     | mean x: 1747409281.9339623
[2025-05-16 13:16:33] 2025-05-16 17:16:12,128 | INFO     | mean y: 2128026.363207547
[2025-05-16 13:16:33] 2025-05-16 17:16:12,128 | INFO     | -- intersect: 2973842094.7882633
[2025-05-16 13:16:33] 2025-05-16 17:16:12,128 | INFO     | intersect: 2973842094.7882633
[2025-05-16 13:16:33] 2025-05-16 17:16:12,128 | INFO     | chi2: 0.10025445660811085
[2025-05-16 13:16:33] 2025-05-16 17:16:12,128 | INFO     | current chi2=0.10025445660811085 (change=1.8734912692584653 %)
[2025-05-16 13:16:33] 2025-05-16 17:16:12,129 | INFO     | left removable region: 50
[2025-05-16 13:16:33] 2025-05-16 17:16:12,129 | INFO     | sum of square deviations: 1838671448.6408834
[2025-05-16 13:16:33] 2025-05-16 17:16:12,130 | INFO     | sum of deviations: 2422087341.1823206
[2025-05-16 13:16:33] 2025-05-16 17:16:12,130 | INFO     | mean x: 1747409861.441989
[2025-05-16 13:16:33] 2025-05-16 17:16:12,130 | INFO     | mean y: 2123017.1602209946
[2025-05-16 13:16:33] 2025-05-16 17:16:12,130 | INFO     | -- intersect: -2299745165.099476
[2025-05-16 13:16:33] 2025-05-16 17:16:12,130 | INFO     | intersect: -2299745165.099476
[2025-05-16 13:16:33] 2025-05-16 17:16:12,130 | INFO     | chi2: 0.06357069200754947
[2025-05-16 13:16:33] 2025-05-16 17:16:12,130 | INFO     | -- intersect: -2299745165.099476
[2025-05-16 13:16:33] 2025-05-16 17:16:12,130 | INFO     | current memory leak: 1.32 B/s (using 181 data points, chi2=0.06)
[2025-05-16 13:16:33] 2025-05-16 17:16:12,131 | INFO     | ..............................
[2025-05-16 13:16:33] 2025-05-16 17:16:12,131 | INFO     | . Timing measurements:
[2025-05-16 13:16:33] 2025-05-16 17:16:12,131 | INFO     | . get job = 0 s
[2025-05-16 13:16:33] 2025-05-16 17:16:12,131 | INFO     | . initial setup = 6 s
[2025-05-16 13:16:33] 2025-05-16 17:16:12,131 | INFO     | . payload setup = 19 s
[2025-05-16 13:16:33] 2025-05-16 17:16:12,131 | INFO     | . stage-in = 0 s
[2025-05-16 13:16:33] 2025-05-16 17:16:12,131 | INFO     | . payload execution = 14450 s
[2025-05-16 13:16:33] 2025-05-16 17:16:12,131 | INFO     | . stage-out = 2 s
[2025-05-16 13:16:33] 2025-05-16 17:16:12,131 | INFO     | . log creation = 0 s
[2025-05-16 13:16:33] 2025-05-16 17:16:12,131 | INFO     | ..............................
[2025-05-16 13:16:33] 2025-05-16 17:16:12,211 | INFO     | 
[2025-05-16 13:16:33] 2025-05-16 17:16:12,211 | INFO     | job summary report
[2025-05-16 13:16:33] 2025-05-16 17:16:12,211 | INFO     | --------------------------------------------------
[2025-05-16 13:16:33] 2025-05-16 17:16:12,211 | INFO     | PanDA job id: 6651234874
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | task id: 44638099
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | errors: (none)
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | pilot state: finished 
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | transexitcode: 0
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | exeerrorcode: 0
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | exeerrordiag: 
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | exitcode: 0
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | exitmsg: OK
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | cpuconsumptiontime: 42522 s
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | nevents: 400
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | neventsw: 0
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | pid: 2032811
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | pgrp: 2032811
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | corecount: 8
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | event service: False
[2025-05-16 13:16:33] 2025-05-16 17:16:12,212 | INFO     | sizes: {0: 2392882, 1: 2393738, 2: 2393766, 12: 2393766, 17: 2394000, 23: 2394028, 14472: 2424777, 14473: 2424776, 14475: 2433773, 14476: 2433829, 14485: 2433999}
[2025-05-16 13:16:33] 2025-05-16 17:16:12,213 | INFO     | --------------------------------------------------
[2025-05-16 13:16:33] 2025-05-16 17:16:12,213 | INFO     | 
[2025-05-16 13:16:33] 2025-05-16 17:16:12,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-16 13:16:33] 2025-05-16 17:16:12,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 13:16:33] 2025-05-16 17:16:12,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,234 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 13:16:33] 2025-05-16 17:16:12,234 | INFO     | job 6651234874 has completed (purged errors)
[2025-05-16 13:16:33] 2025-05-16 17:16:12,234 | INFO     | overall cleanup function is called
[2025-05-16 13:16:33] 2025-05-16 17:16:13,242 | INFO     | --- collectZombieJob: --- 10, [2032811]
[2025-05-16 13:16:33] 2025-05-16 17:16:13,242 | INFO     | zombie collector waiting for pid 2032811
[2025-05-16 13:16:33] 2025-05-16 17:16:13,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 13:16:33] 2025-05-16 17:16:13,243 | INFO     | collected zombie processes
[2025-05-16 13:16:33] 2025-05-16 17:16:13,243 | INFO     | will attempt to kill all subprocesses of pid=2032811
[2025-05-16 13:16:33] 2025-05-16 17:16:13,616 | INFO     | process IDs to be killed: [2032811] (in reverse order)
[2025-05-16 13:16:33] 2025-05-16 17:16:13,757 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 13:16:33] 2025-05-16 17:16:13,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 13:16:33] 2025-05-16 17:16:13,775 | INFO     | did not find any defunct processes belonging to 2032811
[2025-05-16 13:16:33] 2025-05-16 17:16:13,791 | INFO     | did not find any defunct processes belonging to 2032811
[2025-05-16 13:16:33] 2025-05-16 17:16:13,791 | INFO     | ready for new job
[2025-05-16 13:16:33] 2025-05-16 17:16:13,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 13:16:33] 2025-05-16 17:16:13,793 | INFO     | **************************************
[2025-05-16 13:16:33] 2025-05-16 17:16:13,793 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 13:16:33] 2025-05-16 17:16:13,793 | INFO     | **************************************
[2025-05-16 13:16:33] 2025-05-16 17:16:13,793 | INFO     | 
[2025-05-16 13:16:33] 2025-05-16 17:16:13,809 | INFO     | architecture information:
[2025-05-16 13:16:33] 2025-05-16 17:16:13,810 | INFO     | executing command: cat /etc/os-release
[2025-05-16 13:16:33] 2025-05-16 17:16:13,849 | INFO     | cat /etc/os-release:
[2025-05-16 13:16:33] NAME="CentOS Linux"
[2025-05-16 13:16:33] VERSION="7 (Core)"
[2025-05-16 13:16:33] ID="centos"
[2025-05-16 13:16:33] ID_LIKE="rhel fedora"
[2025-05-16 13:16:33] VERSION_ID="7"
[2025-05-16 13:16:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 13:16:33] ANSI_COLOR="0;31"
[2025-05-16 13:16:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 13:16:33] HOME_URL="https://www.centos.org/"
[2025-05-16 13:16:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 13:16:33] 
[2025-05-16 13:16:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 13:16:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 13:16:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 13:16:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 13:16:33] 
[2025-05-16 13:16:33] 2025-05-16 17:16:13,850 | INFO     | **************************************
[2025-05-16 13:16:33] 2025-05-16 17:16:14,354 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-16 13:16:33] 2025-05-16 17:16:14,392 | INFO     | sufficient remaining disk space (84893761536 B)
[2025-05-16 13:16:33] 2025-05-16 17:16:14,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 13:16:33] 2025-05-16 17:16:14,392 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 13:16:33] 2025-05-16 17:16:14,393 | INFO     | update_server=False
[2025-05-16 13:16:33] 2025-05-16 17:16:14,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 13:16:33] 2025-05-16 17:16:14,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 13:16:33] 2025-05-16 17:16:14,393 | INFO     | aborting loop
[2025-05-16 13:16:33] 2025-05-16 17:16:14,438 | INFO     | all data control threads have been joined
[2025-05-16 13:16:33] 2025-05-16 17:16:14,548 | INFO     | all payload control threads have been joined
[2025-05-16 13:16:33] 2025-05-16 17:16:15,247 | INFO     | all job control threads have been joined
[2025-05-16 13:16:33] 2025-05-16 17:16:15,357 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 13:16:33] 2025-05-16 17:16:15,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 13:16:33] 2025-05-16 17:16:15,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 13:16:33] 2025-05-16 17:16:15,398 | INFO     | [job] retrieve thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:15,399 | INFO     | [job] job monitor thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:15,452 | INFO     | [data] control thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:15,481 | INFO     | [job] validate thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:15,558 | INFO     | [payload] control thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:15,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 13:16:33] 2025-05-16 17:16:15,579 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:15,839 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:16,262 | INFO     | [job] control thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:16,427 | INFO     | [payload] failed_post thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:16,432 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:16,643 | INFO     | [payload] validate_post thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:16,888 | INFO     | [data] copytool_in thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:17,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 13:16:33] 2025-05-16 17:16:17,584 | INFO     | [data] copytool_out thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:17,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 13:16:33] 2025-05-16 17:16:18,243 | INFO     | [job] queue monitor thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:21,640 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:25,120 | INFO     | job.realtimelogging is not enabled
[2025-05-16 13:16:33] 2025-05-16 17:16:26,126 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 13:16:33] 2025-05-16 17:16:27,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140502796236608)>', '<ExcThread(monitor, started 140502447933184)>']
[2025-05-16 13:16:33] 2025-05-16 17:16:28,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 13:16:33] 2025-05-16 17:16:28,439 | INFO     | [monitor] control thread has ended
[2025-05-16 13:16:33] 2025-05-16 17:16:32,965 | INFO     | all workflow threads have been joined
[2025-05-16 13:16:33] 2025-05-16 17:16:32,965 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 13:16:33] 2025-05-16 17:16:32,965 | INFO     | traces error code: 0
[2025-05-16 13:16:33] 2025-05-16 17:16:32,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 13:16:33] 2025-05-16 17:16:33,158 [wrapper] ==== pilot stdout END ====
[2025-05-16 13:16:33] 2025-05-16 17:16:33,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 13:16:33] 2025-05-16 17:16:33,192 [wrapper] pilotpid: 2022449
[2025-05-16 13:16:33] 2025-05-16 17:16:33,202 [wrapper] Pilot exit status: 0
[2025-05-16 13:16:33] 2025-05-16 17:16:33,254 [wrapper] pandaids: 6651234874
[2025-05-16 13:16:33] 2025-05-16 17:16:33,376 [wrapper] cleanup supervisor_pilot 3228026 2022450
[2025-05-16 13:16:33] 2025-05-16 17:16:33,381 [wrapper] Test setup, not cleaning
[2025-05-16 13:16:33] 2025-05-16 17:16:33,385 [wrapper] apfmon messages muted
[2025-05-16 13:16:33] 2025-05-16 17:16:33,388 [wrapper] ==== wrapper stdout END ====
[2025-05-16 13:16:33] 2025-05-16 17:16:33,391 [wrapper] ==== wrapper stderr END ====
[2025-05-16 13:16:33]  *** Error codes and diagnostics ***
[2025-05-16 13:16:33]     "exeErrorCode": 0,
[2025-05-16 13:16:33]     "exeErrorDiag": "",
[2025-05-16 13:16:33]     "pilotErrorCode": 0,
[2025-05-16 13:16:33]     "pilotErrorDiag": "",
[2025-05-16 13:16:33]  *** Listing of results directory ***
[2025-05-16 13:16:33] total 415860
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas    495897 May 16 01:14 pilot3.tar.gz
[2025-05-16 13:16:33] -rwx------. 1 boincer umatlas     37140 May 16 01:39 runpilot2-wrapper.sh
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas       100 May 16 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 13:16:33] -rwxr-xr-x. 1 boincer umatlas      7986 May 16 09:13 run_atlas
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas       105 May 16 09:13 job.xml
[2025-05-16 13:16:33] -rw-r--r--. 2 boincer umatlas 222494072 May 16 09:13 EVNT.44638096._001866.pool.root.1
[2025-05-16 13:16:33] -rw-r--r--. 2 boincer umatlas     17569 May 16 09:13 start_atlas.sh
[2025-05-16 13:16:33] drwxrwx--x. 2 boincer umatlas      4096 May 16 09:13 shared
[2025-05-16 13:16:33] -rw-r--r--. 2 boincer umatlas    507095 May 16 09:13 input.tar.gz
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas         0 May 16 09:13 boinc_lockfile
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas      2538 May 16 09:13 pandaJob.out
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas       467 May 16 09:13 setup.sh.local
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas      5111 May 16 09:13 queuedata.json
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas    989428 May 16 09:13 agis_schedconf.cvmfs.json
[2025-05-16 13:16:33] drwx------. 4 boincer umatlas      4096 May 16 09:14 pilot3
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas      6897 May 16 13:10 init_data.xml
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas        95 May 16 13:15 pilot_heartbeat.json
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas 196267383 May 16 13:15 HITS.44638099._035266.pool.root.1
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas       530 May 16 13:15 boinc_task_state.xml
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas      1032 May 16 13:15 memory_monitor_summary.json
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas   1596741 May 16 13:16 agis_ddmendpoints.agis.ALL.json
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas    385751 May 16 13:16 log.44638099._035266.job.log.tgz.1
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas      7693 May 16 13:16 heartbeat.json
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas        28 May 16 13:16 wrapper_checkpoint.txt
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas      8192 May 16 13:16 boinc_mmap_file
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas      4425 May 16 13:16 pilotlog.txt
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas   1238306 May 16 13:16 log.44638099._035266.job.log.1
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas       357 May 16 13:16 output.list
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas       620 May 16 13:16 runtime_log
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas   1638400 May 16 13:16 result.tar.gz
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas     11419 May 16 13:16 runtime_log.err
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas       657 May 16 13:16 LrXKDmNy2Z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgBLKDmmsBMBn.diag
[2025-05-16 13:16:33] -rw-r--r--. 1 boincer umatlas     20866 May 16 13:16 stderr.txt
[2025-05-16 13:16:33] HITS file was successfully produced:
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas 196267383 May 16 13:15 shared/HITS.pool.root.1
[2025-05-16 13:16:33]  *** Contents of shared directory: ***
[2025-05-16 13:16:33] total 411072
[2025-05-16 13:16:33] -rw-r--r--. 2 boincer umatlas 222494072 May 16 09:13 ATLAS.root_0
[2025-05-16 13:16:33] -rw-r--r--. 2 boincer umatlas     17569 May 16 09:13 start_atlas.sh
[2025-05-16 13:16:33] -rw-r--r--. 2 boincer umatlas    507095 May 16 09:13 input.tar.gz
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas 196267383 May 16 13:15 HITS.pool.root.1
[2025-05-16 13:16:33] -rw-------. 1 boincer umatlas   1638400 May 16 13:16 result.tar.gz
13:16:35 (2016987): run_atlas exited; CPU time 42800.032497
13:16:35 (2016987): called boinc_finish(0)

</stderr_txt>
]]>

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