Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:39:23 (1877085): wrapper (7.7.26015): starting
09:39:23 (1877085): wrapper: running run_atlas (--nthreads 4)
[2025-05-17 09:39:23] Arguments: --nthreads 4
[2025-05-17 09:39:23] Threads: 4
[2025-05-17 09:39:23] Checking for CVMFS
[2025-05-17 09:39:23] No cvmfs_config command found, will try listing directly
[2025-05-17 09:39:23] CVMFS is ok
[2025-05-17 09:39:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 09:39:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 09:39:23] Further information can be found at the LHC@home message board.
[2025-05-17 09:39:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 09:39:23] Checking for apptainer binary...
[2025-05-17 09:39:23] which: no apptainer in ((null))
[2025-05-17 09:39:23] apptainer is not installed, using version from CVMFS
[2025-05-17 09:39:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 09:39:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-05-17 09:39:23] apptainer works
[2025-05-17 09:39:23] Set ATHENA_PROC_NUMBER=4
[2025-05-17 09:39:23] Set ATHENA_CORE_NUMBER=4
[2025-05-17 09:39:23] Starting ATLAS job with PandaID=6651460056
[2025-05-17 09:39:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 13:22:33]  *** The last 200 lines of the pilot log: ***
[2025-05-17 13:22:33] 2025-05-17 11:22:12,961 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6651460056/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 13:22:33] 2025-05-17 11:22:12,962 | INFO     | extracted standard info from prmon json
[2025-05-17 13:22:33] 2025-05-17 11:22:12,962 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 13:22:33] 2025-05-17 11:22:12,963 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 13:22:33] 2025-05-17 11:22:12,963 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 13:22:33] 2025-05-17 11:22:12,963 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 13:22:33] 2025-05-17 11:22:12,968 | INFO     | fitting pss+swap vs Time
[2025-05-17 13:22:33] 2025-05-17 11:22:12,969 | INFO     | sum of square deviations: 3256879670.0
[2025-05-17 13:22:33] 2025-05-17 11:22:12,970 | INFO     | sum of deviations: 81100366810.0
[2025-05-17 13:22:33] 2025-05-17 11:22:12,971 | INFO     | mean x: 1747474261.0
[2025-05-17 13:22:33] 2025-05-17 11:22:12,971 | INFO     | mean y: 2254802.634703196
[2025-05-17 13:22:33] 2025-05-17 11:22:12,971 | INFO     | -- intersect: -43512034307.75594
[2025-05-17 13:22:33] 2025-05-17 11:22:12,971 | INFO     | intersect: -43512034307.75594
[2025-05-17 13:22:33] 2025-05-17 11:22:12,971 | INFO     | chi2: 4.6970071541598095
[2025-05-17 13:22:33] 2025-05-17 11:22:12,972 | INFO     | sum of square deviations: 3038856977.5
[2025-05-17 13:22:33] 2025-05-17 11:22:12,973 | INFO     | sum of deviations: 92279019593.0
[2025-05-17 13:22:33] 2025-05-17 11:22:12,973 | INFO     | mean x: 1747474108.5
[2025-05-17 13:22:33] 2025-05-17 11:22:12,974 | INFO     | mean y: 2262446.953271028
[2025-05-17 13:22:33] 2025-05-17 11:22:12,974 | INFO     | -- intersect: -53062162331.995285
[2025-05-17 13:22:33] 2025-05-17 11:22:12,974 | INFO     | intersect: -53062162331.995285
[2025-05-17 13:22:33] 2025-05-17 11:22:12,974 | INFO     | chi2: 3.9444437329924047
[2025-05-17 13:22:33] 2025-05-17 11:22:12,974 | INFO     | current chi2=3.9444437329924047 (change=16.022190225980648 %)
[2025-05-17 13:22:33] 2025-05-17 11:22:12,974 | INFO     | right removable region: 213
[2025-05-17 13:22:33] 2025-05-17 11:22:12,975 | INFO     | sum of square deviations: 3038856977.5
[2025-05-17 13:22:33] 2025-05-17 11:22:12,976 | INFO     | sum of deviations: 31133539961.000004
[2025-05-17 13:22:33] 2025-05-17 11:22:12,976 | INFO     | mean x: 1747474413.5
[2025-05-17 13:22:33] 2025-05-17 11:22:12,976 | INFO     | mean y: 2289657.878504673
[2025-05-17 13:22:33] 2025-05-17 11:22:12,976 | INFO     | -- intersect: -17900844608.178703
[2025-05-17 13:22:33] 2025-05-17 11:22:12,977 | INFO     | intersect: -17900844608.178703
[2025-05-17 13:22:33] 2025-05-17 11:22:12,977 | INFO     | chi2: 2.229543279416772
[2025-05-17 13:22:33] 2025-05-17 11:22:12,977 | INFO     | current chi2=2.229543279416772 (change=52.532682914007864 %)
[2025-05-17 13:22:33] 2025-05-17 11:22:12,977 | INFO     | sum of square deviations: 2830787960.0
[2025-05-17 13:22:33] 2025-05-17 11:22:12,979 | INFO     | sum of deviations: -7609742009.0
[2025-05-17 13:22:33] 2025-05-17 11:22:12,979 | INFO     | mean x: 1747474566.0
[2025-05-17 13:22:33] 2025-05-17 11:22:12,979 | INFO     | mean y: 2318054.3827751195
[2025-05-17 13:22:33] 2025-05-17 11:22:12,979 | INFO     | -- intersect: 4699890180.042531
[2025-05-17 13:22:33] 2025-05-17 11:22:12,979 | INFO     | intersect: 4699890180.042531
[2025-05-17 13:22:33] 2025-05-17 11:22:12,979 | INFO     | chi2: 0.8665642483211073
[2025-05-17 13:22:33] 2025-05-17 11:22:12,980 | INFO     | current chi2=0.8665642483211073 (change=61.132656346200534 %)
[2025-05-17 13:22:33] 2025-05-17 11:22:12,980 | INFO     | sum of square deviations: 2632440055.0
[2025-05-17 13:22:33] 2025-05-17 11:22:12,981 | INFO     | sum of deviations: -13582706916.500004
[2025-05-17 13:22:33] 2025-05-17 11:22:12,982 | INFO     | mean x: 1747474718.5
[2025-05-17 13:22:33] 2025-05-17 11:22:12,982 | INFO     | mean y: 2322583.181372549
[2025-05-17 13:22:33] 2025-05-17 11:22:12,982 | INFO     | -- intersect: 9018838230.060497
[2025-05-17 13:22:33] 2025-05-17 11:22:12,982 | INFO     | intersect: 9018838230.060497
[2025-05-17 13:22:33] 2025-05-17 11:22:12,982 | INFO     | chi2: 0.7945780858177783
[2025-05-17 13:22:33] 2025-05-17 11:22:12,982 | INFO     | current chi2=0.7945780858177783 (change=8.307077362445533 %)
[2025-05-17 13:22:33] 2025-05-17 11:22:12,982 | INFO     | left removable region: 30
[2025-05-17 13:22:33] 2025-05-17 11:22:12,983 | INFO     | sum of square deviations: 1900284932.0
[2025-05-17 13:22:33] 2025-05-17 11:22:12,984 | INFO     | sum of deviations: 1659260695.0
[2025-05-17 13:22:33] 2025-05-17 11:22:12,984 | INFO     | mean x: 1747474993.0
[2025-05-17 13:22:33] 2025-05-17 11:22:12,984 | INFO     | mean y: 2329936.8961748634
[2025-05-17 13:22:33] 2025-05-17 11:22:12,984 | INFO     | -- intersect: -1523502596.190658
[2025-05-17 13:22:33] 2025-05-17 11:22:12,984 | INFO     | intersect: -1523502596.190658
[2025-05-17 13:22:33] 2025-05-17 11:22:12,985 | INFO     | chi2: 0.0030511973122114983
[2025-05-17 13:22:33] 2025-05-17 11:22:12,985 | INFO     | -- intersect: -1523502596.190658
[2025-05-17 13:22:33] 2025-05-17 11:22:12,985 | INFO     | current memory leak: 0.87 B/s (using 183 data points, chi2=0.00)
[2025-05-17 13:22:33] 2025-05-17 11:22:12,985 | INFO     | ..............................
[2025-05-17 13:22:33] 2025-05-17 11:22:12,986 | INFO     | . Timing measurements:
[2025-05-17 13:22:33] 2025-05-17 11:22:12,986 | INFO     | . get job = 0 s
[2025-05-17 13:22:33] 2025-05-17 11:22:12,986 | INFO     | . initial setup = 1 s
[2025-05-17 13:22:33] 2025-05-17 11:22:12,986 | INFO     | . payload setup = 8 s
[2025-05-17 13:22:33] 2025-05-17 11:22:12,986 | INFO     | . stage-in = 0 s
[2025-05-17 13:22:33] 2025-05-17 11:22:12,986 | INFO     | . payload execution = 13308 s
[2025-05-17 13:22:33] 2025-05-17 11:22:12,986 | INFO     | . stage-out = 1 s
[2025-05-17 13:22:33] 2025-05-17 11:22:12,986 | INFO     | . log creation = 0 s
[2025-05-17 13:22:33] 2025-05-17 11:22:12,986 | INFO     | ..............................
[2025-05-17 13:22:33] 2025-05-17 11:22:13,103 | INFO     | 
[2025-05-17 13:22:33] 2025-05-17 11:22:13,103 | INFO     | job summary report
[2025-05-17 13:22:33] 2025-05-17 11:22:13,103 | INFO     | --------------------------------------------------
[2025-05-17 13:22:33] 2025-05-17 11:22:13,103 | INFO     | PanDA job id: 6651460056
[2025-05-17 13:22:33] 2025-05-17 11:22:13,104 | INFO     | task id: 44638099
[2025-05-17 13:22:33] 2025-05-17 11:22:13,104 | INFO     | errors: (none)
[2025-05-17 13:22:33] 2025-05-17 11:22:13,104 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 13:22:33] 2025-05-17 11:22:13,104 | INFO     | pilot state: finished 
[2025-05-17 13:22:33] 2025-05-17 11:22:13,104 | INFO     | transexitcode: 0
[2025-05-17 13:22:33] 2025-05-17 11:22:13,104 | INFO     | exeerrorcode: 0
[2025-05-17 13:22:33] 2025-05-17 11:22:13,104 | INFO     | exeerrordiag: 
[2025-05-17 13:22:33] 2025-05-17 11:22:13,104 | INFO     | exitcode: 0
[2025-05-17 13:22:33] 2025-05-17 11:22:13,104 | INFO     | exitmsg: OK
[2025-05-17 13:22:33] 2025-05-17 11:22:13,104 | INFO     | cpuconsumptiontime: 48512 s
[2025-05-17 13:22:33] 2025-05-17 11:22:13,104 | INFO     | nevents: 400
[2025-05-17 13:22:33] 2025-05-17 11:22:13,105 | INFO     | neventsw: 0
[2025-05-17 13:22:33] 2025-05-17 11:22:13,105 | INFO     | pid: 1891080
[2025-05-17 13:22:33] 2025-05-17 11:22:13,105 | INFO     | pgrp: 1891080
[2025-05-17 13:22:33] 2025-05-17 11:22:13,105 | INFO     | corecount: 4
[2025-05-17 13:22:33] 2025-05-17 11:22:13,105 | INFO     | event service: False
[2025-05-17 13:22:33] 2025-05-17 11:22:13,105 | INFO     | sizes: {0: 2393551, 1: 2393750, 8: 2393956, 12: 2393984, 13321: 2424453, 13322: 2424452, 13325: 2433599, 13326: 2433683, 13338: 2433853}
[2025-05-17 13:22:33] 2025-05-17 11:22:13,105 | INFO     | --------------------------------------------------
[2025-05-17 13:22:33] 2025-05-17 11:22:13,105 | INFO     | 
[2025-05-17 13:22:33] 2025-05-17 11:22:13,105 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-05-17 13:22:33] 2025-05-17 11:22:13,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,153 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 13:22:33] 2025-05-17 11:22:13,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,154 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 13:22:33] 2025-05-17 11:22:13,154 | INFO     | job 6651460056 has completed (purged errors)
[2025-05-17 13:22:33] 2025-05-17 11:22:13,154 | INFO     | overall cleanup function is called
[2025-05-17 13:22:33] 2025-05-17 11:22:14,162 | INFO     | --- collectZombieJob: --- 10, [1891080]
[2025-05-17 13:22:33] 2025-05-17 11:22:14,163 | INFO     | zombie collector waiting for pid 1891080
[2025-05-17 13:22:33] 2025-05-17 11:22:14,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 13:22:33] 2025-05-17 11:22:14,164 | INFO     | collected zombie processes
[2025-05-17 13:22:33] 2025-05-17 11:22:14,164 | INFO     | will attempt to kill all subprocesses of pid=1891080
[2025-05-17 13:22:33] 2025-05-17 11:22:14,924 | INFO     | process IDs to be killed: [1891080] (in reverse order)
[2025-05-17 13:22:33] 2025-05-17 11:22:15,282 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 13:22:33] 2025-05-17 11:22:15,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 13:22:33] 2025-05-17 11:22:15,308 | INFO     | did not find any defunct processes belonging to 1891080
[2025-05-17 13:22:33] 2025-05-17 11:22:15,330 | INFO     | did not find any defunct processes belonging to 1891080
[2025-05-17 13:22:33] 2025-05-17 11:22:15,330 | INFO     | ready for new job
[2025-05-17 13:22:33] 2025-05-17 11:22:15,330 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 13:22:33] 2025-05-17 11:22:15,333 | INFO     | **************************************
[2025-05-17 13:22:33] 2025-05-17 11:22:15,333 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 13:22:33] 2025-05-17 11:22:15,333 | INFO     | **************************************
[2025-05-17 13:22:33] 2025-05-17 11:22:15,333 | INFO     | 
[2025-05-17 13:22:33] 2025-05-17 11:22:15,342 | INFO     | architecture information:
[2025-05-17 13:22:33] 2025-05-17 11:22:15,343 | INFO     | executing command: cat /etc/os-release
[2025-05-17 13:22:33] 2025-05-17 11:22:15,410 | INFO     | cat /etc/os-release:
[2025-05-17 13:22:33] NAME="CentOS Linux"
[2025-05-17 13:22:33] VERSION="7 (Core)"
[2025-05-17 13:22:33] ID="centos"
[2025-05-17 13:22:33] ID_LIKE="rhel fedora"
[2025-05-17 13:22:33] VERSION_ID="7"
[2025-05-17 13:22:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 13:22:33] ANSI_COLOR="0;31"
[2025-05-17 13:22:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 13:22:33] HOME_URL="https://www.centos.org/"
[2025-05-17 13:22:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 13:22:33] 
[2025-05-17 13:22:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 13:22:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 13:22:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 13:22:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 13:22:33] 
[2025-05-17 13:22:33] 2025-05-17 11:22:15,410 | INFO     | **************************************
[2025-05-17 13:22:33] 2025-05-17 11:22:15,913 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-05-17 13:22:33] 2025-05-17 11:22:15,951 | INFO     | sufficient remaining disk space (3345102143488 B)
[2025-05-17 13:22:33] 2025-05-17 11:22:15,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 13:22:33] 2025-05-17 11:22:15,951 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 13:22:33] 2025-05-17 11:22:15,951 | INFO     | update_server=False
[2025-05-17 13:22:33] 2025-05-17 11:22:15,952 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 13:22:33] 2025-05-17 11:22:15,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 13:22:33] 2025-05-17 11:22:16,114 | INFO     | all payload control threads have been joined
[2025-05-17 13:22:33] 2025-05-17 11:22:16,273 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 13:22:33] 2025-05-17 11:22:16,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 13:22:33] 2025-05-17 11:22:16,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 13:22:33] 2025-05-17 11:22:16,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 13:22:33] 2025-05-17 11:22:16,293 | INFO     | all data control threads have been joined
[2025-05-17 13:22:33] 2025-05-17 11:22:16,940 | INFO     | all job control threads have been joined
[2025-05-17 13:22:33] 2025-05-17 11:22:16,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 13:22:33] 2025-05-17 11:22:16,944 | INFO     | aborting loop
[2025-05-17 13:22:33] 2025-05-17 11:22:16,957 | INFO     | [job] retrieve thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:17,009 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:17,121 | INFO     | [payload] control thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:17,136 | INFO     | [job] validate thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:17,290 | INFO     | [data] copytool_in thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:17,303 | INFO     | [data] control thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:17,360 | INFO     | [payload] validate_post thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:17,479 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:17,593 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:17,946 | INFO     | [job] control thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:17,949 | INFO     | [job] job monitor thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:17,958 | INFO     | [data] copytool_out thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:18,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 13:22:33] 2025-05-17 11:22:18,264 | INFO     | [payload] failed_post thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:19,120 | INFO     | [job] queue monitor thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:20,283 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:26,405 | INFO     | job.realtimelogging is not enabled
[2025-05-17 13:22:33] 2025-05-17 11:22:27,410 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 13:22:33] 2025-05-17 11:22:27,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23250356631360)>', '<ExcThread(monitor, started 23250117555968)>']
[2025-05-17 13:22:33] 2025-05-17 11:22:28,335 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 13:22:33] 2025-05-17 11:22:28,335 | INFO     | [monitor] control thread has ended
[2025-05-17 13:22:33] 2025-05-17 11:22:32,636 | INFO     | all workflow threads have been joined
[2025-05-17 13:22:33] 2025-05-17 11:22:32,637 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 13:22:33] 2025-05-17 11:22:32,637 | INFO     | traces error code: 0
[2025-05-17 13:22:33] 2025-05-17 11:22:32,637 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 13:22:33] 2025-05-17 11:22:32,831 [wrapper] ==== pilot stdout END ====
[2025-05-17 13:22:33] 2025-05-17 11:22:32,836 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 13:22:33] 2025-05-17 11:22:32,840 [wrapper] pilotpid: 1883034
[2025-05-17 13:22:33] 2025-05-17 11:22:32,845 [wrapper] Pilot exit status: 0
[2025-05-17 13:22:33] 2025-05-17 11:22:32,938 [wrapper] pandaids: 6651460056
[2025-05-17 13:22:33] 2025-05-17 11:22:33,121 [wrapper] cleanup supervisor_pilot 2999092 1883035
[2025-05-17 13:22:33] 2025-05-17 11:22:33,126 [wrapper] Test setup, not cleaning
[2025-05-17 13:22:33] 2025-05-17 11:22:33,147 [wrapper] apfmon messages muted
[2025-05-17 13:22:33] 2025-05-17 11:22:33,159 [wrapper] ==== wrapper stdout END ====
[2025-05-17 13:22:33] 2025-05-17 11:22:33,188 [wrapper] ==== wrapper stderr END ====
[2025-05-17 13:22:33]  *** Error codes and diagnostics ***
[2025-05-17 13:22:33]     "exeErrorCode": 0,
[2025-05-17 13:22:33]     "exeErrorDiag": "",
[2025-05-17 13:22:33]     "pilotErrorCode": 0,
[2025-05-17 13:22:33]     "pilotErrorDiag": "",
[2025-05-17 13:22:33]  *** Listing of results directory ***
[2025-05-17 13:22:33] total 414024
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc    495897 May 16 10:36 pilot3.tar.gz
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc      5111 May 16 11:07 queuedata.json
[2025-05-17 13:22:33] -rwx------ 1 boinc boinc     37140 May 16 11:08 runpilot2-wrapper.sh
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc       100 May 17 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 13:22:33] -rwxr-xr-x 1 boinc boinc      7986 May 17 09:39 run_atlas
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc       105 May 17 09:39 job.xml
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc      6674 May 17 09:39 init_data.xml
[2025-05-17 13:22:33] -rw-r--r-- 2 boinc boinc 221507306 May 17 09:39 EVNT.44638096._000676.pool.root.1
[2025-05-17 13:22:33] drwxrwx--x 2 boinc boinc      4096 May 17 09:39 shared
[2025-05-17 13:22:33] -rw-r--r-- 2 boinc boinc    508878 May 17 09:39 input.tar.gz
[2025-05-17 13:22:33] -rw-r--r-- 2 boinc boinc     17569 May 17 09:39 start_atlas.sh
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc         0 May 17 09:39 boinc_lockfile
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc      2539 May 17 09:39 pandaJob.out
[2025-05-17 13:22:33] -rw------- 1 boinc boinc       424 May 17 09:39 setup.sh.local
[2025-05-17 13:22:33] -rw------- 1 boinc boinc    994635 May 17 09:39 agis_schedconf.cvmfs.json
[2025-05-17 13:22:33] drwx------ 4 boinc boinc      4096 May 17 09:39 pilot3
[2025-05-17 13:22:33] -rw------- 1 boinc boinc 195516165 May 17 13:21 HITS.44638099._037739.pool.root.1
[2025-05-17 13:22:33] -rw------- 1 boinc boinc        95 May 17 13:21 pilot_heartbeat.json
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc       530 May 17 13:21 boinc_task_state.xml
[2025-05-17 13:22:33] -rw------- 1 boinc boinc      1028 May 17 13:21 memory_monitor_summary.json
[2025-05-17 13:22:33] -rw------- 1 boinc boinc   1596741 May 17 13:21 agis_ddmendpoints.agis.ALL.json
[2025-05-17 13:22:33] -rw------- 1 boinc boinc    331378 May 17 13:21 log.44638099._037739.job.log.tgz.1
[2025-05-17 13:22:33] -rw------- 1 boinc boinc      7699 May 17 13:22 heartbeat.json
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc      8192 May 17 13:22 boinc_mmap_file
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc        28 May 17 13:22 wrapper_checkpoint.txt
[2025-05-17 13:22:33] -rw------- 1 boinc boinc      4436 May 17 13:22 pilotlog.txt
[2025-05-17 13:22:33] -rw------- 1 boinc boinc   1216551 May 17 13:22 log.44638099._037739.job.log.1
[2025-05-17 13:22:33] -rw------- 1 boinc boinc       357 May 17 13:22 output.list
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc       620 May 17 13:22 runtime_log
[2025-05-17 13:22:33] -rw------- 1 boinc boinc   1566720 May 17 13:22 result.tar.gz
[2025-05-17 13:22:33] -rw------- 1 boinc boinc       666 May 17 13:22 z7sMDmUE6Z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnZLKDmlYbTWo.diag
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc     11424 May 17 13:22 runtime_log.err
[2025-05-17 13:22:33] -rw-r--r-- 1 boinc boinc     20615 May 17 13:22 stderr.txt
[2025-05-17 13:22:33] HITS file was successfully produced:
[2025-05-17 13:22:33] -rw------- 1 boinc boinc 195516165 May 17 13:21 shared/HITS.pool.root.1
[2025-05-17 13:22:33]  *** Contents of shared directory: ***
[2025-05-17 13:22:33] total 409308
[2025-05-17 13:22:33] -rw-r--r-- 2 boinc boinc 221507306 May 17 09:39 ATLAS.root_0
[2025-05-17 13:22:33] -rw-r--r-- 2 boinc boinc    508878 May 17 09:39 input.tar.gz
[2025-05-17 13:22:33] -rw-r--r-- 2 boinc boinc     17569 May 17 09:39 start_atlas.sh
[2025-05-17 13:22:33] -rw------- 1 boinc boinc 195516165 May 17 13:21 HITS.pool.root.1
[2025-05-17 13:22:33] -rw------- 1 boinc boinc   1566720 May 17 13:22 result.tar.gz
13:22:35 (1877085): run_atlas exited; CPU time 49272.484190
13:22:35 (1877085): called boinc_finish(0)

</stderr_txt>
]]>

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