Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:46:21 (2379129): wrapper (7.7.26015): starting
05:46:21 (2379129): wrapper: running run_atlas (--nthreads 9)
[2025-05-16 05:46:21] Arguments: --nthreads 9
[2025-05-16 05:46:21] Threads: 9
[2025-05-16 05:46:21] Checking for CVMFS
[2025-05-16 05:46:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 05:46:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 05:46:22] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 05:46:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 05:46:22] 2.12.6.0 6634 3978 259876 146059 3 642 24352771 32935936 30655 16776704 0 29239269 99.604 33560551 25759 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-16 05:46:22] CVMFS is ok
[2025-05-16 05:46:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 05:46:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 05:46:23] Further information can be found at the LHC@home message board.
[2025-05-16 05:46:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 05:46:23] Checking for apptainer binary...
[2025-05-16 05:46:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 05:46:23] Running /usr/bin/apptainer --version
[2025-05-16 05:46:23] apptainer version 1.4.0-1.el9
[2025-05-16 05:46:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 05:46:23] c6-12-29-1.aglt2.org
[2025-05-16 05:46:23] apptainer works
[2025-05-16 05:46:23] Set ATHENA_PROC_NUMBER=9
[2025-05-16 05:46:23] Set ATHENA_CORE_NUMBER=9
[2025-05-16 05:46:23] Starting ATLAS job with PandaID=6650439123
[2025-05-16 05:46:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 13:42:35]  *** The last 200 lines of the pilot log: ***
[2025-05-16 13:42:36] 2025-05-16 17:42:13,526 | INFO     | mean y: 2105830.882352941
[2025-05-16 13:42:36] 2025-05-16 17:42:13,526 | INFO     | -- intersect: -23045473962.014515
[2025-05-16 13:42:36] 2025-05-16 17:42:13,526 | INFO     | intersect: -23045473962.014515
[2025-05-16 13:42:36] 2025-05-16 17:42:13,527 | INFO     | chi2: 7.348641798448995
[2025-05-16 13:42:36] 2025-05-16 17:42:13,527 | INFO     | current chi2=7.348641798448995 (change=10.047009739233928 %)
[2025-05-16 13:42:36] 2025-05-16 17:42:13,527 | INFO     | right removable region: 458
[2025-05-16 13:42:36] 2025-05-16 17:42:13,553 | INFO     | sum of square deviations: 29986145884.509876
[2025-05-16 13:42:36] 2025-05-16 17:42:13,579 | INFO     | monitor loop #1529: job 0:6650439123 is in state 'finished'
[2025-05-16 13:42:36] 2025-05-16 17:42:13,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-16 13:42:36] 2025-05-16 17:42:13,604 | INFO     | sum of deviations: 249694213202.6012
[2025-05-16 13:42:36] 2025-05-16 17:42:13,605 | INFO     | mean x: 1747403251.3006537
[2025-05-16 13:42:36] 2025-05-16 17:42:13,605 | INFO     | mean y: 2117863.3289760347
[2025-05-16 13:42:36] 2025-05-16 17:42:13,605 | INFO     | -- intersect: -14548484326.816927
[2025-05-16 13:42:36] 2025-05-16 17:42:13,605 | INFO     | intersect: -14548484326.816927
[2025-05-16 13:42:36] 2025-05-16 17:42:13,606 | INFO     | chi2: 5.049107644656313
[2025-05-16 13:42:36] 2025-05-16 17:42:13,606 | INFO     | current chi2=5.049107644656313 (change=38.19506471506223 %)
[2025-05-16 13:42:36] 2025-05-16 17:42:13,606 | INFO     | sum of square deviations: 29016811201.552933
[2025-05-16 13:42:36] 2025-05-16 17:42:13,665 | INFO     | sum of deviations: 167183022931.06152
[2025-05-16 13:42:36] 2025-05-16 17:42:13,715 | INFO     | mean x: 1747403403.8039649
[2025-05-16 13:42:36] 2025-05-16 17:42:13,715 | INFO     | mean y: 2130838.8546255506
[2025-05-16 13:42:36] 2025-05-16 17:42:13,715 | INFO     | -- intersect: -10065694371.116709
[2025-05-16 13:42:36] 2025-05-16 17:42:13,715 | INFO     | intersect: -10065694371.116709
[2025-05-16 13:42:36] 2025-05-16 17:42:13,716 | INFO     | chi2: 3.4908706044596283
[2025-05-16 13:42:36] 2025-05-16 17:42:13,716 | INFO     | current chi2=3.4908706044596283 (change=30.86163238856342 %)
[2025-05-16 13:42:36] 2025-05-16 17:42:13,716 | INFO     | sum of square deviations: 28068593193.58573
[2025-05-16 13:42:36] 2025-05-16 17:42:13,735 | INFO     | sum of deviations: 91352283837.20255
[2025-05-16 13:42:36] 2025-05-16 17:42:13,735 | INFO     | mean x: 1747403556.3073497
[2025-05-16 13:42:36] 2025-05-16 17:42:13,735 | INFO     | mean y: 2143036.8173719374
[2025-05-16 13:42:36] 2025-05-16 17:42:13,736 | INFO     | -- intersect: -5684971545.412735
[2025-05-16 13:42:36] 2025-05-16 17:42:13,736 | INFO     | intersect: -5684971545.412735
[2025-05-16 13:42:36] 2025-05-16 17:42:13,754 | INFO     | chi2: 2.1813618006996025
[2025-05-16 13:42:36] 2025-05-16 17:42:13,755 | INFO     | current chi2=2.1813618006996025 (change=37.512384506235 %)
[2025-05-16 13:42:36] 2025-05-16 17:42:13,755 | INFO     | sum of square deviations: 27141286442.727493
[2025-05-16 13:42:36] 2025-05-16 17:42:13,780 | INFO     | sum of deviations: 36439459446.19592
[2025-05-16 13:42:36] 2025-05-16 17:42:13,780 | INFO     | mean x: 1747403708.8085585
[2025-05-16 13:42:36] 2025-05-16 17:42:13,781 | INFO     | mean y: 2152061.7905405406
[2025-05-16 13:42:36] 2025-05-16 17:42:13,781 | INFO     | -- intersect: -2343884362.0033426
[2025-05-16 13:42:36] 2025-05-16 17:42:13,781 | INFO     | intersect: -2343884362.0033426
[2025-05-16 13:42:36] 2025-05-16 17:42:13,781 | INFO     | chi2: 1.4901489553436122
[2025-05-16 13:42:36] 2025-05-16 17:42:13,781 | INFO     | current chi2=1.4901489553436122 (change=31.687216908919268 %)
[2025-05-16 13:42:36] 2025-05-16 17:42:13,782 | INFO     | sum of square deviations: 26234604402.245968
[2025-05-16 13:42:36] 2025-05-16 17:42:13,815 | INFO     | sum of deviations: -1048385306.4715309
[2025-05-16 13:42:36] 2025-05-16 17:42:13,815 | INFO     | mean x: 1747403861.312073
[2025-05-16 13:42:36] 2025-05-16 17:42:13,815 | INFO     | mean y: 2158357.485193622
[2025-05-16 13:42:36] 2025-05-16 17:42:13,815 | INFO     | -- intersect: 71987980.3978364
[2025-05-16 13:42:36] 2025-05-16 17:42:13,816 | INFO     | intersect: 71987980.3978364
[2025-05-16 13:42:36] 2025-05-16 17:42:13,816 | INFO     | chi2: 1.1382147136222922
[2025-05-16 13:42:36] 2025-05-16 17:42:13,816 | INFO     | current chi2=1.1382147136222922 (change=23.6173867356883 %)
[2025-05-16 13:42:36] 2025-05-16 17:42:13,816 | INFO     | left removable region: 50
[2025-05-16 13:42:36] 2025-05-16 17:42:13,817 | INFO     | sum of square deviations: 21060194658.115246
[2025-05-16 13:42:36] 2025-05-16 17:42:13,837 | INFO     | sum of deviations: 24906296389.48041
[2025-05-16 13:42:36] 2025-05-16 17:42:13,837 | INFO     | mean x: 1747404440.7965686
[2025-05-16 13:42:36] 2025-05-16 17:42:13,837 | INFO     | mean y: 2166039.343137255
[2025-05-16 13:42:36] 2025-05-16 17:42:13,837 | INFO     | -- intersect: -2064356783.512314
[2025-05-16 13:42:36] 2025-05-16 17:42:13,837 | INFO     | intersect: -2064356783.512314
[2025-05-16 13:42:36] 2025-05-16 17:42:13,838 | INFO     | chi2: 0.1929014519144374
[2025-05-16 13:42:36] 2025-05-16 17:42:13,838 | INFO     | -- intersect: -2064356783.512314
[2025-05-16 13:42:36] 2025-05-16 17:42:13,846 | INFO     | current memory leak: 1.18 B/s (using 408 data points, chi2=0.19)
[2025-05-16 13:42:36] 2025-05-16 17:42:13,848 | INFO     | ..............................
[2025-05-16 13:42:36] 2025-05-16 17:42:13,848 | INFO     | . Timing measurements:
[2025-05-16 13:42:36] 2025-05-16 17:42:13,848 | INFO     | . get job = 0 s
[2025-05-16 13:42:36] 2025-05-16 17:42:13,848 | INFO     | . initial setup = 4 s
[2025-05-16 13:42:36] 2025-05-16 17:42:13,848 | INFO     | . payload setup = 44 s
[2025-05-16 13:42:36] 2025-05-16 17:42:13,848 | INFO     | . stage-in = 0 s
[2025-05-16 13:42:36] 2025-05-16 17:42:13,848 | INFO     | . payload execution = 28328 s
[2025-05-16 13:42:36] 2025-05-16 17:42:13,848 | INFO     | . stage-out = 9 s
[2025-05-16 13:42:36] 2025-05-16 17:42:13,848 | INFO     | . log creation = 1 s
[2025-05-16 13:42:36] 2025-05-16 17:42:13,848 | INFO     | ..............................
[2025-05-16 13:42:36] 2025-05-16 17:42:14,480 | INFO     | 
[2025-05-16 13:42:36] 2025-05-16 17:42:14,480 | INFO     | job summary report
[2025-05-16 13:42:36] 2025-05-16 17:42:14,480 | INFO     | --------------------------------------------------
[2025-05-16 13:42:36] 2025-05-16 17:42:14,480 | INFO     | PanDA job id: 6650439123
[2025-05-16 13:42:36] 2025-05-16 17:42:14,480 | INFO     | task id: 44638099
[2025-05-16 13:42:36] 2025-05-16 17:42:14,480 | INFO     | errors: (none)
[2025-05-16 13:42:36] 2025-05-16 17:42:14,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 13:42:36] 2025-05-16 17:42:14,480 | INFO     | pilot state: finished 
[2025-05-16 13:42:36] 2025-05-16 17:42:14,480 | INFO     | transexitcode: 0
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | exeerrorcode: 0
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | exeerrordiag: 
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | exitcode: 0
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | exitmsg: OK
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | cpuconsumptiontime: 54833 s
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | nevents: 400
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | neventsw: 0
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | pid: 2422484
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | pgrp: 2422484
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | corecount: 9
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | event service: False
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | sizes: {0: 2393483, 1: 2393567, 2: 2393766, 13: 2393766, 24: 2393822, 34: 2394056, 35: 2394212, 28378: 2430366, 28379: 2430365, 28391: 2439362, 28394: 2439418, 284
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | --------------------------------------------------
[2025-05-16 13:42:36] 2025-05-16 17:42:14,481 | INFO     | 
[2025-05-16 13:42:36] 2025-05-16 17:42:14,482 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-16 13:42:36] 2025-05-16 17:42:14,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 13:42:36] 2025-05-16 17:42:14,665 | INFO     | job 6650439123 has completed (purged errors)
[2025-05-16 13:42:36] 2025-05-16 17:42:14,666 | INFO     | overall cleanup function is called
[2025-05-16 13:42:36] 2025-05-16 17:42:15,693 | INFO     | --- collectZombieJob: --- 10, [2422484]
[2025-05-16 13:42:36] 2025-05-16 17:42:15,694 | INFO     | zombie collector waiting for pid 2422484
[2025-05-16 13:42:36] 2025-05-16 17:42:15,694 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 13:42:36] 2025-05-16 17:42:15,694 | INFO     | collected zombie processes
[2025-05-16 13:42:36] 2025-05-16 17:42:15,694 | INFO     | will attempt to kill all subprocesses of pid=2422484
[2025-05-16 13:42:36] 2025-05-16 17:42:18,886 | INFO     | process IDs to be killed: [2422484] (in reverse order)
[2025-05-16 13:42:36] 2025-05-16 17:42:19,297 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 13:42:36] 2025-05-16 17:42:19,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 13:42:36] 2025-05-16 17:42:19,356 | INFO     | did not find any defunct processes belonging to 2422484
[2025-05-16 13:42:36] 2025-05-16 17:42:19,380 | INFO     | did not find any defunct processes belonging to 2422484
[2025-05-16 13:42:36] 2025-05-16 17:42:19,381 | INFO     | ready for new job
[2025-05-16 13:42:36] 2025-05-16 17:42:19,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 13:42:36] 2025-05-16 17:42:19,384 | INFO     | **************************************
[2025-05-16 13:42:36] 2025-05-16 17:42:19,384 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 13:42:36] 2025-05-16 17:42:19,384 | INFO     | **************************************
[2025-05-16 13:42:36] 2025-05-16 17:42:19,384 | INFO     | 
[2025-05-16 13:42:36] 2025-05-16 17:42:19,390 | INFO     | architecture information:
[2025-05-16 13:42:36] 2025-05-16 17:42:19,391 | INFO     | executing command: cat /etc/os-release
[2025-05-16 13:42:36] 2025-05-16 17:42:19,467 | INFO     | cat /etc/os-release:
[2025-05-16 13:42:36] NAME="CentOS Linux"
[2025-05-16 13:42:36] VERSION="7 (Core)"
[2025-05-16 13:42:36] ID="centos"
[2025-05-16 13:42:36] ID_LIKE="rhel fedora"
[2025-05-16 13:42:36] VERSION_ID="7"
[2025-05-16 13:42:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 13:42:36] ANSI_COLOR="0;31"
[2025-05-16 13:42:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 13:42:36] HOME_URL="https://www.centos.org/"
[2025-05-16 13:42:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 13:42:36] 
[2025-05-16 13:42:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 13:42:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 13:42:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 13:42:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 13:42:36] 
[2025-05-16 13:42:36] 2025-05-16 17:42:19,468 | INFO     | **************************************
[2025-05-16 13:42:36] 2025-05-16 17:42:19,973 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-16 13:42:36] 2025-05-16 17:42:20,116 | INFO     | sufficient remaining disk space (93865377792 B)
[2025-05-16 13:42:36] 2025-05-16 17:42:20,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 13:42:36] 2025-05-16 17:42:20,116 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 13:42:36] 2025-05-16 17:42:20,117 | INFO     | update_server=False
[2025-05-16 13:42:36] 2025-05-16 17:42:20,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 13:42:36] 2025-05-16 17:42:20,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 13:42:36] 2025-05-16 17:42:20,136 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 13:42:36] 2025-05-16 17:42:20,137 | INFO     | aborting loop
[2025-05-16 13:42:36] 2025-05-16 17:42:20,381 | INFO     | all payload control threads have been joined
[2025-05-16 13:42:36] 2025-05-16 17:42:20,647 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 13:42:36] 2025-05-16 17:42:20,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 13:42:36] 2025-05-16 17:42:20,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 13:42:36] 2025-05-16 17:42:21,113 | INFO     | all data control threads have been joined
[2025-05-16 13:42:36] 2025-05-16 17:42:21,123 | INFO     | [job] queue monitor thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:21,135 | INFO     | [job] retrieve thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:21,142 | INFO     | [job] job monitor thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:21,158 | INFO     | all job control threads have been joined
[2025-05-16 13:42:36] 2025-05-16 17:42:21,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 13:42:36] 2025-05-16 17:42:21,388 | INFO     | [payload] control thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:21,546 | INFO     | [payload] failed_post thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:21,864 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:21,872 | INFO     | [job] validate thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:21,997 | INFO     | [payload] validate_post thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:22,119 | INFO     | [data] control thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:22,152 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:22,164 | INFO     | [job] control thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:22,185 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:22,305 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 13:42:36] 2025-05-16 17:42:22,322 | INFO     | [data] copytool_in thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:22,389 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:23,188 | INFO     | [data] copytool_out thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:26,314 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 13:42:36] 2025-05-16 17:42:27,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265044944704)>', '<ExcThread(monitor, started 140264555403008)>']
[2025-05-16 13:42:36] 2025-05-16 17:42:28,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 13:42:36] 2025-05-16 17:42:28,697 | INFO     | [monitor] control thread has ended
[2025-05-16 13:42:36] 2025-05-16 17:42:32,842 | INFO     | all workflow threads have been joined
[2025-05-16 13:42:36] 2025-05-16 17:42:32,844 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 13:42:36] 2025-05-16 17:42:32,844 | INFO     | traces error code: 0
[2025-05-16 13:42:36] 2025-05-16 17:42:32,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 13:42:36] 2025-05-16 17:42:34,226 [wrapper] ==== pilot stdout END ====
[2025-05-16 13:42:36] 2025-05-16 17:42:34,236 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 13:42:36] 2025-05-16 17:42:34,257 [wrapper] pilotpid: 2388838
[2025-05-16 13:42:36] 2025-05-16 17:42:34,300 [wrapper] Pilot exit status: 0
[2025-05-16 13:42:36] 2025-05-16 17:42:34,408 [wrapper] pandaids: 6650439123
[2025-05-16 13:42:36] 2025-05-16 17:42:35,187 [wrapper] cleanup supervisor_pilot 3698251 2388840
[2025-05-16 13:42:36] 2025-05-16 17:42:35,202 [wrapper] Test setup, not cleaning
[2025-05-16 13:42:36] 2025-05-16 17:42:35,228 [wrapper] apfmon messages muted
[2025-05-16 13:42:36] 2025-05-16 17:42:35,251 [wrapper] ==== wrapper stdout END ====
[2025-05-16 13:42:36] 2025-05-16 17:42:35,281 [wrapper] ==== wrapper stderr END ====
[2025-05-16 13:42:36]  *** Error codes and diagnostics ***
[2025-05-16 13:42:36]     "exeErrorCode": 0,
[2025-05-16 13:42:36]     "exeErrorDiag": "",
[2025-05-16 13:42:36]     "pilotErrorCode": 0,
[2025-05-16 13:42:36]     "pilotErrorDiag": "",
[2025-05-16 13:42:36]  *** Listing of results directory ***
[2025-05-16 13:42:36] total 422072
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas    495897 May 15 12:14 pilot3.tar.gz
[2025-05-16 13:42:36] -rwx------. 1 boincer umatlas     37140 May 15 12:15 runpilot2-wrapper.sh
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas      5111 May 15 12:15 queuedata.json
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas       100 May 16 05:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 13:42:36] -rwxr-xr-x. 1 boincer umatlas      7986 May 16 05:46 run_atlas
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas       105 May 16 05:46 job.xml
[2025-05-16 13:42:36] -rw-r--r--. 2 boincer umatlas 220802606 May 16 05:46 EVNT.44638096._001625.pool.root.1
[2025-05-16 13:42:36] -rw-r--r--. 2 boincer umatlas     17569 May 16 05:46 start_atlas.sh
[2025-05-16 13:42:36] drwxrwx--x. 2 boincer umatlas      4096 May 16 05:46 shared
[2025-05-16 13:42:36] -rw-r--r--. 2 boincer umatlas    508870 May 16 05:46 input.tar.gz
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas         0 May 16 05:46 boinc_lockfile
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas      2538 May 16 05:46 pandaJob.out
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas       467 May 16 05:46 setup.sh.local
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas    989808 May 16 05:47 agis_schedconf.cvmfs.json
[2025-05-16 13:42:36] drwx------. 4 boincer umatlas      4096 May 16 05:47 pilot3
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas 202286655 May 16 13:40 HITS.44638099._026329.pool.root.1
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas       531 May 16 13:40 boinc_task_state.xml
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas      6861 May 16 13:40 init_data.xml
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas      1043 May 16 13:41 memory_monitor_summary.json
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas   1596741 May 16 13:41 agis_ddmendpoints.agis.ALL.json
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas    508791 May 16 13:41 log.44638099._026329.job.log.tgz.1
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas        95 May 16 13:41 pilot_heartbeat.json
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas      7725 May 16 13:42 heartbeat.json
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas      8192 May 16 13:42 boinc_mmap_file
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas        28 May 16 13:42 wrapper_checkpoint.txt
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas      4353 May 16 13:42 pilotlog.txt
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas   2127728 May 16 13:42 log.44638099._026329.job.log.1
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas       357 May 16 13:42 output.list
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas       620 May 16 13:42 runtime_log
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas   2652160 May 16 13:42 result.tar.gz
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas     11429 May 16 13:42 runtime_log.err
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas       661 May 16 13:42 PMOODm5PqZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcjJKDmkoyQfn.diag
[2025-05-16 13:42:36] -rw-r--r--. 1 boincer umatlas     20943 May 16 13:42 stderr.txt
[2025-05-16 13:42:36] HITS file was successfully produced:
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas 202286655 May 16 13:40 shared/HITS.pool.root.1
[2025-05-16 13:42:36]  *** Contents of shared directory: ***
[2025-05-16 13:42:36] total 416296
[2025-05-16 13:42:36] -rw-r--r--. 2 boincer umatlas 220802606 May 16 05:46 ATLAS.root_0
[2025-05-16 13:42:36] -rw-r--r--. 2 boincer umatlas     17569 May 16 05:46 start_atlas.sh
[2025-05-16 13:42:36] -rw-r--r--. 2 boincer umatlas    508870 May 16 05:46 input.tar.gz
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas 202286655 May 16 13:40 HITS.pool.root.1
[2025-05-16 13:42:36] -rw-------. 1 boincer umatlas   2652160 May 16 13:42 result.tar.gz
13:42:38 (2379129): run_atlas exited; CPU time 56357.358339
13:42:38 (2379129): called boinc_finish(0)

</stderr_txt>
]]>

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