Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:55:46 (1272790): wrapper (7.7.26015): starting
05:55:46 (1272790): wrapper: running run_atlas (--nthreads 10)
[2025-05-16 05:55:46] Arguments: --nthreads 10
[2025-05-16 05:55:46] Threads: 10
[2025-05-16 05:55:46] Checking for CVMFS
[2025-05-16 05:55:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 05:55:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 05:55:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 05:55:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 05:55:48] 2.12.6.0 7820 3818 130328 146059 3 649 27049482 40960000 53536 16776704 0 43920743 99.688 34175262 36168 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-16 05:55:48] CVMFS is ok
[2025-05-16 05:55:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 05:55:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 05:55:48] Further information can be found at the LHC@home message board.
[2025-05-16 05:55:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 05:55:48] Checking for apptainer binary...
[2025-05-16 05:55:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 05:55:48] Running /usr/bin/apptainer --version
[2025-05-16 05:55:52] apptainer version 1.4.0-1.el9
[2025-05-16 05:55:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 05:55:53] c8-7-6.aglt2.org
[2025-05-16 05:55:53] apptainer works
[2025-05-16 05:55:53] Set ATHENA_PROC_NUMBER=10
[2025-05-16 05:55:53] Set ATHENA_CORE_NUMBER=10
[2025-05-16 05:55:53] Starting ATLAS job with PandaID=6651277943
[2025-05-16 05:55:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 08:48:02]  *** The last 200 lines of the pilot log: ***
[2025-05-16 08:48:03] 2025-05-16 12:47:39,687 | INFO     | -- intersect: -196658532890.065
[2025-05-16 08:48:03] 2025-05-16 12:47:39,687 | INFO     | intersect: -196658532890.065
[2025-05-16 08:48:03] 2025-05-16 12:47:39,687 | INFO     | chi2: 9.068707354716834
[2025-05-16 08:48:03] 2025-05-16 12:47:39,687 | INFO     | current chi2=9.068707354716834 (change=8.317321583373872 %)
[2025-05-16 08:48:03] 2025-05-16 12:47:39,687 | INFO     | right removable region: 158
[2025-05-16 08:48:03] 2025-05-16 12:47:39,688 | INFO     | sum of square deviations: 1246395627.5597537
[2025-05-16 08:48:03] 2025-05-16 12:47:39,688 | INFO     | sum of deviations: 82542853118.05042
[2025-05-16 08:48:03] 2025-05-16 12:47:39,688 | INFO     | mean x: 1747394763.201258
[2025-05-16 08:48:03] 2025-05-16 12:47:39,688 | INFO     | mean y: 2430073.748427673
[2025-05-16 08:48:03] 2025-05-16 12:47:39,688 | INFO     | -- intersect: -115719212468.08336
[2025-05-16 08:48:03] 2025-05-16 12:47:39,688 | INFO     | intersect: -115719212468.08336
[2025-05-16 08:48:03] 2025-05-16 12:47:39,688 | INFO     | chi2: 5.573610144745185
[2025-05-16 08:48:03] 2025-05-16 12:47:39,688 | INFO     | current chi2=5.573610144745185 (change=43.652001709534304 %)
[2025-05-16 08:48:03] 2025-05-16 12:47:39,688 | INFO     | sum of square deviations: 1132458149.8506455
[2025-05-16 08:48:03] 2025-05-16 12:47:39,689 | INFO     | sum of deviations: 49244435842.44162
[2025-05-16 08:48:03] 2025-05-16 12:47:39,689 | INFO     | mean x: 1747394915.7077923
[2025-05-16 08:48:03] 2025-05-16 12:47:39,689 | INFO     | mean y: 2474594.298701299
[2025-05-16 08:48:03] 2025-05-16 12:47:39,689 | INFO     | -- intersect: -75982211311.60405
[2025-05-16 08:48:03] 2025-05-16 12:47:39,689 | INFO     | intersect: -75982211311.60405
[2025-05-16 08:48:03] 2025-05-16 12:47:39,689 | INFO     | chi2: 3.9282696726931734
[2025-05-16 08:48:03] 2025-05-16 12:47:39,689 | INFO     | current chi2=3.9282696726931734 (change=29.520193004586858 %)
[2025-05-16 08:48:03] 2025-05-16 12:47:39,707 | INFO     | sum of square deviations: 1025683597.1275146
[2025-05-16 08:48:03] 2025-05-16 12:47:39,707 | INFO     | sum of deviations: 16362228728.449677
[2025-05-16 08:48:03] 2025-05-16 12:47:39,707 | INFO     | mean x: 1747395068.214765
[2025-05-16 08:48:03] 2025-05-16 12:47:39,707 | INFO     | mean y: 2521622.7046979866
[2025-05-16 08:48:03] 2025-05-16 12:47:39,707 | INFO     | -- intersect: -27872817190.51842
[2025-05-16 08:48:03] 2025-05-16 12:47:39,707 | INFO     | intersect: -27872817190.51842
[2025-05-16 08:48:03] 2025-05-16 12:47:39,707 | INFO     | chi2: 2.2280498317318473
[2025-05-16 08:48:03] 2025-05-16 12:47:39,708 | INFO     | current chi2=2.2280498317318473 (change=43.28164771324562 %)
[2025-05-16 08:48:03] 2025-05-16 12:47:39,708 | INFO     | sum of square deviations: 925839406.8888888
[2025-05-16 08:48:03] 2025-05-16 12:47:39,708 | INFO     | sum of deviations: -10794984655.000023
[2025-05-16 08:48:03] 2025-05-16 12:47:39,708 | INFO     | mean x: 1747395220.7222223
[2025-05-16 08:48:03] 2025-05-16 12:47:39,708 | INFO     | mean y: 2562884.25
[2025-05-16 08:48:03] 2025-05-16 12:47:39,708 | INFO     | -- intersect: 20376619608.94994
[2025-05-16 08:48:03] 2025-05-16 12:47:39,708 | INFO     | intersect: 20376619608.94994
[2025-05-16 08:48:03] 2025-05-16 12:47:39,708 | INFO     | chi2: 0.9520450902588744
[2025-05-16 08:48:03] 2025-05-16 12:47:39,708 | INFO     | current chi2=0.9520450902588744 (change=57.27002705685194 %)
[2025-05-16 08:48:03] 2025-05-16 12:47:39,709 | INFO     | sum of square deviations: 832701800.0863315
[2025-05-16 08:48:03] 2025-05-16 12:47:39,709 | INFO     | sum of deviations: -15530707505.424461
[2025-05-16 08:48:03] 2025-05-16 12:47:39,709 | INFO     | mean x: 1747395373.2230215
[2025-05-16 08:48:03] 2025-05-16 12:47:39,709 | INFO     | mean y: 2570479.820143885
[2025-05-16 08:48:03] 2025-05-16 12:47:39,709 | INFO     | -- intersect: 32593212694.17006
[2025-05-16 08:48:03] 2025-05-16 12:47:39,709 | INFO     | intersect: 32593212694.17006
[2025-05-16 08:48:03] 2025-05-16 12:47:39,709 | INFO     | chi2: 0.8658153523882947
[2025-05-16 08:48:03] 2025-05-16 12:47:39,709 | INFO     | current chi2=0.8658153523882947 (change=9.057316586458386 %)
[2025-05-16 08:48:03] 2025-05-16 12:47:39,709 | INFO     | left removable region: 50
[2025-05-16 08:48:03] 2025-05-16 12:47:39,709 | INFO     | sum of square deviations: 390566048.74074095
[2025-05-16 08:48:03] 2025-05-16 12:47:39,710 | INFO     | sum of deviations: -63662850.92592602
[2025-05-16 08:48:03] 2025-05-16 12:47:39,710 | INFO     | mean x: 1747395952.7407408
[2025-05-16 08:48:03] 2025-05-16 12:47:39,710 | INFO     | mean y: 2576108.824074074
[2025-05-16 08:48:03] 2025-05-16 12:47:39,710 | INFO     | -- intersect: 287404266.33180594
[2025-05-16 08:48:03] 2025-05-16 12:47:39,710 | INFO     | intersect: 287404266.33180594
[2025-05-16 08:48:03] 2025-05-16 12:47:39,710 | INFO     | chi2: 0.0009209190199129823
[2025-05-16 08:48:03] 2025-05-16 12:47:39,710 | INFO     | -- intersect: 287404266.33180594
[2025-05-16 08:48:03] 2025-05-16 12:47:39,710 | INFO     | current memory leak: -0.16 B/s (using 108 data points, chi2=0.00)
[2025-05-16 08:48:03] 2025-05-16 12:47:39,729 | INFO     | ..............................
[2025-05-16 08:48:03] 2025-05-16 12:47:39,729 | INFO     | . Timing measurements:
[2025-05-16 08:48:03] 2025-05-16 12:47:39,729 | INFO     | . get job = 0 s
[2025-05-16 08:48:03] 2025-05-16 12:47:39,729 | INFO     | . initial setup = 8 s
[2025-05-16 08:48:03] 2025-05-16 12:47:39,729 | INFO     | . payload setup = 55 s
[2025-05-16 08:48:03] 2025-05-16 12:47:39,729 | INFO     | . stage-in = 0 s
[2025-05-16 08:48:03] 2025-05-16 12:47:39,729 | INFO     | . payload execution = 10022 s
[2025-05-16 08:48:03] 2025-05-16 12:47:39,729 | INFO     | . stage-out = 2 s
[2025-05-16 08:48:03] 2025-05-16 12:47:39,729 | INFO     | . log creation = 0 s
[2025-05-16 08:48:03] 2025-05-16 12:47:39,729 | INFO     | ..............................
[2025-05-16 08:48:03] 2025-05-16 12:47:39,912 | INFO     | 
[2025-05-16 08:48:03] 2025-05-16 12:47:39,912 | INFO     | job summary report
[2025-05-16 08:48:03] 2025-05-16 12:47:39,912 | INFO     | --------------------------------------------------
[2025-05-16 08:48:03] 2025-05-16 12:47:39,912 | INFO     | PanDA job id: 6651277943
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | task id: 44638099
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | errors: (none)
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | pilot state: finished 
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | transexitcode: 0
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | exeerrorcode: 0
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | exeerrordiag: 
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | exitcode: 0
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | exitmsg: OK
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | cpuconsumptiontime: 28780 s
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | nevents: 400
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | neventsw: 0
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | pid: 1366350
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | pgrp: 1366350
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | corecount: 10
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | event service: False
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | sizes: {0: 2393433, 1: 2393688, 2: 2393688, 12: 2393716, 23: 2393744, 34: 2393772, 43: 2394134, 45: 2394162, 10082: 2422443, 10083: 2422442, 10086: 2431439, 10088:
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | --------------------------------------------------
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | 
[2025-05-16 08:48:03] 2025-05-16 12:47:39,913 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-16 08:48:03] 2025-05-16 12:47:40,086 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,087 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,087 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,087 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,089 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,089 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,089 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 08:48:03] 2025-05-16 12:47:40,089 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,090 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 08:48:03] 2025-05-16 12:47:40,090 | INFO     | job 6651277943 has completed (purged errors)
[2025-05-16 08:48:03] 2025-05-16 12:47:40,090 | INFO     | overall cleanup function is called
[2025-05-16 08:48:03] 2025-05-16 12:47:41,123 | INFO     | --- collectZombieJob: --- 10, [1366350]
[2025-05-16 08:48:03] 2025-05-16 12:47:41,123 | INFO     | zombie collector waiting for pid 1366350
[2025-05-16 08:48:03] 2025-05-16 12:47:41,123 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 08:48:03] 2025-05-16 12:47:41,123 | INFO     | collected zombie processes
[2025-05-16 08:48:03] 2025-05-16 12:47:41,123 | INFO     | will attempt to kill all subprocesses of pid=1366350
[2025-05-16 08:48:03] 2025-05-16 12:47:42,890 | INFO     | process IDs to be killed: [1366350] (in reverse order)
[2025-05-16 08:48:03] 2025-05-16 12:47:43,549 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 08:48:03] 2025-05-16 12:47:43,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 08:48:03] 2025-05-16 12:47:43,672 | INFO     | did not find any defunct processes belonging to 1366350
[2025-05-16 08:48:03] 2025-05-16 12:47:43,764 | INFO     | did not find any defunct processes belonging to 1366350
[2025-05-16 08:48:03] 2025-05-16 12:47:43,765 | INFO     | ready for new job
[2025-05-16 08:48:03] 2025-05-16 12:47:43,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 08:48:03] 2025-05-16 12:47:43,770 | INFO     | **************************************
[2025-05-16 08:48:03] 2025-05-16 12:47:43,770 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 08:48:03] 2025-05-16 12:47:43,770 | INFO     | **************************************
[2025-05-16 08:48:03] 2025-05-16 12:47:43,770 | INFO     | 
[2025-05-16 08:48:03] 2025-05-16 12:47:43,797 | INFO     | architecture information:
[2025-05-16 08:48:03] 2025-05-16 12:47:43,802 | INFO     | executing command: cat /etc/os-release
[2025-05-16 08:48:03] 2025-05-16 12:47:43,919 | INFO     | cat /etc/os-release:
[2025-05-16 08:48:03] NAME="CentOS Linux"
[2025-05-16 08:48:03] VERSION="7 (Core)"
[2025-05-16 08:48:03] ID="centos"
[2025-05-16 08:48:03] ID_LIKE="rhel fedora"
[2025-05-16 08:48:03] VERSION_ID="7"
[2025-05-16 08:48:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 08:48:03] ANSI_COLOR="0;31"
[2025-05-16 08:48:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 08:48:03] HOME_URL="https://www.centos.org/"
[2025-05-16 08:48:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 08:48:03] 
[2025-05-16 08:48:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 08:48:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 08:48:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 08:48:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 08:48:03] 
[2025-05-16 08:48:03] 2025-05-16 12:47:43,920 | INFO     | **************************************
[2025-05-16 08:48:03] 2025-05-16 12:47:44,424 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-16 08:48:03] 2025-05-16 12:47:44,557 | INFO     | sufficient remaining disk space (170464903168 B)
[2025-05-16 08:48:03] 2025-05-16 12:47:44,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 08:48:03] 2025-05-16 12:47:44,569 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 08:48:03] 2025-05-16 12:47:44,569 | INFO     | update_server=False
[2025-05-16 08:48:03] 2025-05-16 12:47:44,569 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 08:48:03] 2025-05-16 12:47:44,638 | INFO     | all data control threads have been joined
[2025-05-16 08:48:03] 2025-05-16 12:47:44,667 | INFO     | all payload control threads have been joined
[2025-05-16 08:48:03] 2025-05-16 12:47:44,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 08:48:03] 2025-05-16 12:47:44,931 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 08:48:03] 2025-05-16 12:47:44,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 08:48:03] 2025-05-16 12:47:44,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 08:48:03] 2025-05-16 12:47:45,041 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-16 08:48:03] 2025-05-16 12:47:45,042 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-16 08:48:03] 2025-05-16 12:47:45,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 08:48:03] 2025-05-16 12:47:45,042 | INFO     | will abort loop
[2025-05-16 08:48:03] 2025-05-16 12:47:45,230 | INFO     | all job control threads have been joined
[2025-05-16 08:48:03] 2025-05-16 12:47:45,575 | INFO     | [job] retrieve thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:45,644 | INFO     | [data] control thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:45,673 | INFO     | [data] copytool_in thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:45,678 | INFO     | [payload] control thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:45,723 | INFO     | [payload] validate_post thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:45,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 08:48:03] 2025-05-16 12:47:45,844 | INFO     | [job] validate thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:45,932 | INFO     | [job] queue monitor thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:46,048 | INFO     | [job] job monitor thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:46,171 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:46,237 | INFO     | [job] control thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:46,272 | INFO     | [payload] failed_post thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:46,408 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:46,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 08:48:03] 2025-05-16 12:47:46,606 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:47,810 | INFO     | [data] copytool_out thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:50,439 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:54,765 | INFO     | job.realtimelogging is not enabled
[2025-05-16 08:48:03] 2025-05-16 12:47:55,773 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 08:48:03] 2025-05-16 12:47:56,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750686988096)>', '<ExcThread(monitor, started 139749369046784)>']
[2025-05-16 08:48:03] 2025-05-16 12:47:56,033 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 08:48:03] 2025-05-16 12:47:56,033 | INFO     | [monitor] control thread has ended
[2025-05-16 08:48:03] 2025-05-16 12:48:01,049 | INFO     | all workflow threads have been joined
[2025-05-16 08:48:03] 2025-05-16 12:48:01,051 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 08:48:03] 2025-05-16 12:48:01,051 | INFO     | traces error code: 0
[2025-05-16 08:48:03] 2025-05-16 12:48:01,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 08:48:03] 2025-05-16 12:48:01,761 [wrapper] ==== pilot stdout END ====
[2025-05-16 08:48:03] 2025-05-16 12:48:01,813 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 08:48:03] 2025-05-16 12:48:01,835 [wrapper] pilotpid: 1298401
[2025-05-16 08:48:03] 2025-05-16 12:48:01,849 [wrapper] Pilot exit status: 0
[2025-05-16 08:48:03] 2025-05-16 12:48:01,946 [wrapper] pandaids: 6651277943
[2025-05-16 08:48:03] 2025-05-16 12:48:02,426 [wrapper] cleanup supervisor_pilot  818283 1298402
[2025-05-16 08:48:03] 2025-05-16 12:48:02,466 [wrapper] Test setup, not cleaning
[2025-05-16 08:48:03] 2025-05-16 12:48:02,480 [wrapper] apfmon messages muted
[2025-05-16 08:48:03] 2025-05-16 12:48:02,520 [wrapper] ==== wrapper stdout END ====
[2025-05-16 08:48:03] 2025-05-16 12:48:02,553 [wrapper] ==== wrapper stderr END ====
[2025-05-16 08:48:03]  *** Error codes and diagnostics ***
[2025-05-16 08:48:03]     "exeErrorCode": 0,
[2025-05-16 08:48:03]     "exeErrorDiag": "",
[2025-05-16 08:48:03]     "pilotErrorCode": 0,
[2025-05-16 08:48:03]     "pilotErrorDiag": "",
[2025-05-16 08:48:03]  *** Listing of results directory ***
[2025-05-16 08:48:03] total 413276
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas      5111 May 16 03:15 queuedata.json
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas    495897 May 16 03:15 pilot3.tar.gz
[2025-05-16 08:48:03] -rwx------. 1 boincer umatlas     37140 May 16 03:15 runpilot2-wrapper.sh
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas       100 May 16 05:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 08:48:03] -rwxr-xr-x. 1 boincer umatlas      7986 May 16 05:55 run_atlas
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas       105 May 16 05:55 job.xml
[2025-05-16 08:48:03] -rw-r--r--. 2 boincer umatlas 222393889 May 16 05:55 EVNT.44638096._000471.pool.root.1
[2025-05-16 08:48:03] -rw-r--r--. 2 boincer umatlas    508875 May 16 05:55 input.tar.gz
[2025-05-16 08:48:03] drwxrwx--x. 2 boincer umatlas      4096 May 16 05:55 shared
[2025-05-16 08:48:03] -rw-r--r--. 2 boincer umatlas     17569 May 16 05:55 start_atlas.sh
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas         0 May 16 05:55 boinc_lockfile
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas      2538 May 16 05:55 pandaJob.out
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas       467 May 16 05:55 setup.sh.local
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas    989808 May 16 05:57 agis_schedconf.cvmfs.json
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas   1596741 May 16 05:57 agis_ddmendpoints.agis.ALL.json
[2025-05-16 08:48:03] drwx------. 4 boincer umatlas      4096 May 16 05:57 pilot3
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas      7159 May 16 08:38 init_data.xml
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas 194625706 May 16 08:46 HITS.44638099._036373.pool.root.1
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas       530 May 16 08:46 boinc_task_state.xml
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas      1052 May 16 08:46 memory_monitor_summary.json
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas    379867 May 16 08:46 log.44638099._036373.job.log.tgz.1
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas        95 May 16 08:47 pilot_heartbeat.json
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas      7715 May 16 08:47 heartbeat.json
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas      8192 May 16 08:48 boinc_mmap_file
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas      4612 May 16 08:48 pilotlog.txt
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas        27 May 16 08:48 wrapper_checkpoint.txt
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas    784001 May 16 08:48 log.44638099._036373.job.log.1
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas       357 May 16 08:48 output.list
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas       620 May 16 08:48 runtime_log
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas   1187840 May 16 08:48 result.tar.gz
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas     11411 May 16 08:48 runtime_log.err
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas       659 May 16 08:48 8RXMDmOT4Z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdkIKDmHaHqln.diag
[2025-05-16 08:48:03] -rw-r--r--. 1 boincer umatlas     20917 May 16 08:48 stderr.txt
[2025-05-16 08:48:03] HITS file was successfully produced:
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas 194625706 May 16 08:46 shared/HITS.pool.root.1
[2025-05-16 08:48:03]  *** Contents of shared directory: ***
[2025-05-16 08:48:03] total 408940
[2025-05-16 08:48:03] -rw-r--r--. 2 boincer umatlas 222393889 May 16 05:55 ATLAS.root_0
[2025-05-16 08:48:03] -rw-r--r--. 2 boincer umatlas    508875 May 16 05:55 input.tar.gz
[2025-05-16 08:48:03] -rw-r--r--. 2 boincer umatlas     17569 May 16 05:55 start_atlas.sh
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas 194625706 May 16 08:46 HITS.pool.root.1
[2025-05-16 08:48:03] -rw-------. 1 boincer umatlas   1187840 May 16 08:48 result.tar.gz
08:48:04 (1272790): run_atlas exited; CPU time 29135.085747
08:48:04 (1272790): called boinc_finish(0)

</stderr_txt>
]]>

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