Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:08:17 (872818): wrapper (7.7.26015): starting
09:08:17 (872818): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 09:08:17] Arguments: --nthreads 4
[2025-05-16 09:08:17] Threads: 4
[2025-05-16 09:08:17] Checking for CVMFS
[2025-05-16 09:08:17] No cvmfs_config command found, will try listing directly
[2025-05-16 09:08:17] CVMFS is ok
[2025-05-16 09:08:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 09:08:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 09:08:17] Further information can be found at the LHC@home message board.
[2025-05-16 09:08:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 09:08:17] Checking for apptainer binary...
[2025-05-16 09:08:17] which: no apptainer in ((null))
[2025-05-16 09:08:17] apptainer is not installed, using version from CVMFS
[2025-05-16 09:08:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 09:08:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-05-16 09:08:18] apptainer works
[2025-05-16 09:08:18] Set ATHENA_PROC_NUMBER=4
[2025-05-16 09:08:18] Set ATHENA_CORE_NUMBER=4
[2025-05-16 09:08:18] Starting ATLAS job with PandaID=6651102748
[2025-05-16 09:08:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:40:53 (60441): wrapper (7.7.26015): starting
12:40:53 (60441): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 12:40:53] Arguments: --nthreads 4
[2025-05-16 12:40:53] Threads: 4
[2025-05-16 12:40:53] This job has been restarted, cleaning up previous attempt
[2025-05-16 12:40:53] Checking for CVMFS
[2025-05-16 12:40:53] No cvmfs_config command found, will try listing directly
[2025-05-16 12:40:54] CVMFS is ok
[2025-05-16 12:40:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 12:40:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 12:40:54] Further information can be found at the LHC@home message board.
[2025-05-16 12:40:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 12:40:54] Checking for apptainer binary...
[2025-05-16 12:40:54] which: no apptainer in ((null))
[2025-05-16 12:40:54] apptainer is not installed, using version from CVMFS
[2025-05-16 12:40:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 12:40:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-05-16 12:40:54] apptainer works
[2025-05-16 12:40:54] Set ATHENA_PROC_NUMBER=4
[2025-05-16 12:40:54] Set ATHENA_CORE_NUMBER=4
[2025-05-16 12:40:54] Starting ATLAS job with PandaID=6651102748
[2025-05-16 12:40:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:10:47 (11688): wrapper (7.7.26015): starting
14:10:47 (11688): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 14:10:47] Arguments: --nthreads 4
[2025-05-16 14:10:47] Threads: 4
[2025-05-16 14:10:47] This job has been restarted, cleaning up previous attempt
[2025-05-16 14:10:47] Checking for CVMFS
[2025-05-16 14:10:47] No cvmfs_config command found, will try listing directly
[2025-05-16 14:10:47] CVMFS is ok
[2025-05-16 14:10:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 14:10:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 14:10:47] Further information can be found at the LHC@home message board.
[2025-05-16 14:10:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 14:10:47] Checking for apptainer binary...
[2025-05-16 14:10:47] which: no apptainer in ((null))
[2025-05-16 14:10:47] apptainer is not installed, using version from CVMFS
[2025-05-16 14:10:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 14:10:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-05-16 14:10:48] apptainer works
[2025-05-16 14:10:48] Set ATHENA_PROC_NUMBER=4
[2025-05-16 14:10:48] Set ATHENA_CORE_NUMBER=4
[2025-05-16 14:10:48] Starting ATLAS job with PandaID=6651102748
[2025-05-16 14:10:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 18:02:59]  *** The last 200 lines of the pilot log: ***
[2025-05-16 18:02:59] 2025-05-16 16:02:39,845 | INFO     | extracted standard info from prmon json
[2025-05-16 18:02:59] 2025-05-16 16:02:39,845 | INFO     | extracted standard memory fields from prmon json
[2025-05-16 18:02:59] 2025-05-16 16:02:39,845 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-16 18:02:59] 2025-05-16 16:02:39,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-16 18:02:59] 2025-05-16 16:02:39,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-16 18:02:59] 2025-05-16 16:02:39,849 | INFO     | fitting pss+swap vs Time
[2025-05-16 18:02:59] 2025-05-16 16:02:39,849 | INFO     | sum of square deviations: 3675146117.0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,850 | INFO     | sum of deviations: 93229754338.5
[2025-05-16 18:02:59] 2025-05-16 16:02:39,850 | INFO     | mean x: 1747404421.5
[2025-05-16 18:02:59] 2025-05-16 16:02:39,850 | INFO     | mean y: 2256572.25
[2025-05-16 18:02:59] 2025-05-16 16:02:39,850 | INFO     | -- intersect: -44325255793.28181
[2025-05-16 18:02:59] 2025-05-16 16:02:39,850 | INFO     | intersect: -44325255793.28181
[2025-05-16 18:02:59] 2025-05-16 16:02:39,851 | INFO     | chi2: 5.159681215729077
[2025-05-16 18:02:59] 2025-05-16 16:02:39,851 | INFO     | sum of square deviations: 3438620752.0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,852 | INFO     | sum of deviations: 105429025663.00005
[2025-05-16 18:02:59] 2025-05-16 16:02:39,852 | INFO     | mean x: 1747404269.0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,852 | INFO     | mean y: 2264271.278026906
[2025-05-16 18:02:59] 2025-05-16 16:02:39,852 | INFO     | -- intersect: -53573614782.23058
[2025-05-16 18:02:59] 2025-05-16 16:02:39,852 | INFO     | intersect: -53573614782.23058
[2025-05-16 18:02:59] 2025-05-16 16:02:39,852 | INFO     | chi2: 4.356047909139937
[2025-05-16 18:02:59] 2025-05-16 16:02:39,852 | INFO     | current chi2=4.356047909139937 (change=15.575251124803932 %)
[2025-05-16 18:02:59] 2025-05-16 16:02:39,852 | INFO     | right removable region: 222
[2025-05-16 18:02:59] 2025-05-16 16:02:39,852 | INFO     | sum of square deviations: 3438620752.0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,853 | INFO     | sum of deviations: 39125563175.0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,853 | INFO     | mean x: 1747404574.0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,853 | INFO     | mean y: 2291374.3139013452
[2025-05-16 18:02:59] 2025-05-16 16:02:39,853 | INFO     | -- intersect: -19880153647.4455
[2025-05-16 18:02:59] 2025-05-16 16:02:39,853 | INFO     | intersect: -19880153647.4455
[2025-05-16 18:02:59] 2025-05-16 16:02:39,853 | INFO     | chi2: 2.5095954420694024
[2025-05-16 18:02:59] 2025-05-16 16:02:39,853 | INFO     | current chi2=2.5095954420694024 (change=51.3614245310543 %)
[2025-05-16 18:02:59] 2025-05-16 16:02:39,854 | INFO     | sum of square deviations: 3212467674.5
[2025-05-16 18:02:59] 2025-05-16 16:02:39,854 | INFO     | sum of deviations: -4888030680.5
[2025-05-16 18:02:59] 2025-05-16 16:02:39,854 | INFO     | mean x: 1747404726.5
[2025-05-16 18:02:59] 2025-05-16 16:02:39,854 | INFO     | mean y: 2321056.2981651374
[2025-05-16 18:02:59] 2025-05-16 16:02:39,854 | INFO     | -- intersect: 2661139379.104206
[2025-05-16 18:02:59] 2025-05-16 16:02:39,854 | INFO     | intersect: 2661139379.104206
[2025-05-16 18:02:59] 2025-05-16 16:02:39,855 | INFO     | chi2: 0.8975191664680334
[2025-05-16 18:02:59] 2025-05-16 16:02:39,855 | INFO     | current chi2=0.8975191664680334 (change=64.23649997834143 %)
[2025-05-16 18:02:59] 2025-05-16 16:02:39,855 | INFO     | sum of square deviations: 2996454322.0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,855 | INFO     | sum of deviations: -10447033240.0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,855 | INFO     | mean x: 1747404879.0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,856 | INFO     | mean y: 2324937.6995305163
[2025-05-16 18:02:59] 2025-05-16 16:02:39,856 | INFO     | -- intersect: 6094590960.452264
[2025-05-16 18:02:59] 2025-05-16 16:02:39,856 | INFO     | intersect: 6094590960.452264
[2025-05-16 18:02:59] 2025-05-16 16:02:39,856 | INFO     | chi2: 0.8472697451065054
[2025-05-16 18:02:59] 2025-05-16 16:02:39,856 | INFO     | current chi2=0.8472697451065054 (change=5.598701759124795 %)
[2025-05-16 18:02:59] 2025-05-16 16:02:39,856 | INFO     | left removable region: 30
[2025-05-16 18:02:59] 2025-05-16 16:02:39,856 | INFO     | sum of square deviations: 2194675568.0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,857 | INFO     | sum of deviations: 552551603.0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,857 | INFO     | mean x: 1747405153.5
[2025-05-16 18:02:59] 2025-05-16 16:02:39,857 | INFO     | mean y: 2336921.2395833335
[2025-05-16 18:02:59] 2025-05-16 16:02:39,857 | INFO     | -- intersect: -437605789.53509915
[2025-05-16 18:02:59] 2025-05-16 16:02:39,857 | INFO     | intersect: -437605789.53509915
[2025-05-16 18:02:59] 2025-05-16 16:02:39,857 | INFO     | chi2: 9.57506393572679e-05
[2025-05-16 18:02:59] 2025-05-16 16:02:39,857 | INFO     | -- intersect: -437605789.53509915
[2025-05-16 18:02:59] 2025-05-16 16:02:39,857 | INFO     | current memory leak: 0.25 B/s (using 192 data points, chi2=0.00)
[2025-05-16 18:02:59] 2025-05-16 16:02:39,858 | INFO     | ..............................
[2025-05-16 18:02:59] 2025-05-16 16:02:39,858 | INFO     | . Timing measurements:
[2025-05-16 18:02:59] 2025-05-16 16:02:39,858 | INFO     | . get job = 0 s
[2025-05-16 18:02:59] 2025-05-16 16:02:39,858 | INFO     | . initial setup = 1 s
[2025-05-16 18:02:59] 2025-05-16 16:02:39,858 | INFO     | . payload setup = 7 s
[2025-05-16 18:02:59] 2025-05-16 16:02:39,858 | INFO     | . stage-in = 0 s
[2025-05-16 18:02:59] 2025-05-16 16:02:39,858 | INFO     | . payload execution = 13861 s
[2025-05-16 18:02:59] 2025-05-16 16:02:39,858 | INFO     | . stage-out = 0 s
[2025-05-16 18:02:59] 2025-05-16 16:02:39,858 | INFO     | . log creation = 0 s
[2025-05-16 18:02:59] 2025-05-16 16:02:39,858 | INFO     | ..............................
[2025-05-16 18:02:59] 2025-05-16 16:02:39,914 | INFO     | 
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | job summary report
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | --------------------------------------------------
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | PanDA job id: 6651102748
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | task id: 44638099
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | errors: (none)
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | pilot state: finished 
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | transexitcode: 0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | exeerrorcode: 0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | exeerrordiag: 
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | exitcode: 0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | exitmsg: OK
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | cpuconsumptiontime: 49969 s
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | nevents: 400
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | neventsw: 0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | pid: 366214
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | pgrp: 366214
[2025-05-16 18:02:59] 2025-05-16 16:02:39,915 | INFO     | corecount: 4
[2025-05-16 18:02:59] 2025-05-16 16:02:39,916 | INFO     | event service: False
[2025-05-16 18:02:59] 2025-05-16 16:02:39,916 | INFO     | sizes: {0: 2393724, 5: 2393930, 11: 2393986, 13872: 2424594, 13874: 2433557, 13876: 2433613, 13880: 2433911}
[2025-05-16 18:02:59] 2025-05-16 16:02:39,916 | INFO     | --------------------------------------------------
[2025-05-16 18:02:59] 2025-05-16 16:02:39,916 | INFO     | 
[2025-05-16 18:02:59] 2025-05-16 16:02:39,916 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/0
[2025-05-16 18:02:59] 2025-05-16 16:02:39,934 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,934 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,934 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,934 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | job 6651102748 has completed (purged errors)
[2025-05-16 18:02:59] 2025-05-16 16:02:39,935 | INFO     | overall cleanup function is called
[2025-05-16 18:02:59] 2025-05-16 16:02:40,943 | INFO     | --- collectZombieJob: --- 10, [366214]
[2025-05-16 18:02:59] 2025-05-16 16:02:40,944 | INFO     | zombie collector waiting for pid 366214
[2025-05-16 18:02:59] 2025-05-16 16:02:40,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 18:02:59] 2025-05-16 16:02:40,944 | INFO     | collected zombie processes
[2025-05-16 18:02:59] 2025-05-16 16:02:40,944 | INFO     | will attempt to kill all subprocesses of pid=366214
[2025-05-16 18:02:59] 2025-05-16 16:02:41,332 | INFO     | process IDs to be killed: [366214] (in reverse order)
[2025-05-16 18:02:59] 2025-05-16 16:02:41,508 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 18:02:59] 2025-05-16 16:02:41,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 18:02:59] 2025-05-16 16:02:41,527 | INFO     | did not find any defunct processes belonging to 366214
[2025-05-16 18:02:59] 2025-05-16 16:02:41,543 | INFO     | did not find any defunct processes belonging to 366214
[2025-05-16 18:02:59] 2025-05-16 16:02:41,543 | INFO     | ready for new job
[2025-05-16 18:02:59] 2025-05-16 16:02:41,543 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 18:02:59] 2025-05-16 16:02:41,545 | INFO     | **************************************
[2025-05-16 18:02:59] 2025-05-16 16:02:41,545 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 18:02:59] 2025-05-16 16:02:41,545 | INFO     | **************************************
[2025-05-16 18:02:59] 2025-05-16 16:02:41,545 | INFO     | 
[2025-05-16 18:02:59] 2025-05-16 16:02:41,553 | INFO     | architecture information:
[2025-05-16 18:02:59] 2025-05-16 16:02:41,553 | INFO     | executing command: cat /etc/os-release
[2025-05-16 18:02:59] 2025-05-16 16:02:41,568 | INFO     | cat /etc/os-release:
[2025-05-16 18:02:59] NAME="CentOS Linux"
[2025-05-16 18:02:59] VERSION="7 (Core)"
[2025-05-16 18:02:59] ID="centos"
[2025-05-16 18:02:59] ID_LIKE="rhel fedora"
[2025-05-16 18:02:59] VERSION_ID="7"
[2025-05-16 18:02:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 18:02:59] ANSI_COLOR="0;31"
[2025-05-16 18:02:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 18:02:59] HOME_URL="https://www.centos.org/"
[2025-05-16 18:02:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 18:02:59] 
[2025-05-16 18:02:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 18:02:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 18:02:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 18:02:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 18:02:59] 
[2025-05-16 18:02:59] 2025-05-16 16:02:41,568 | INFO     | **************************************
[2025-05-16 18:02:59] 2025-05-16 16:02:42,071 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/0
[2025-05-16 18:02:59] 2025-05-16 16:02:42,084 | INFO     | sufficient remaining disk space (3358455758848 B)
[2025-05-16 18:02:59] 2025-05-16 16:02:42,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 18:02:59] 2025-05-16 16:02:42,084 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 18:02:59] 2025-05-16 16:02:42,084 | INFO     | update_server=False
[2025-05-16 18:02:59] 2025-05-16 16:02:42,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 18:02:59] 2025-05-16 16:02:42,085 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 18:02:59] 2025-05-16 16:02:42,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 18:02:59] 2025-05-16 16:02:42,085 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-16 18:02:59] 2025-05-16 16:02:42,086 | INFO     | aborting loop
[2025-05-16 18:02:59] 2025-05-16 16:02:42,086 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 18:02:59] 2025-05-16 16:02:42,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 18:02:59] 2025-05-16 16:02:42,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 18:02:59] 2025-05-16 16:02:42,415 | INFO     | all data control threads have been joined
[2025-05-16 18:02:59] 2025-05-16 16:02:42,425 | INFO     | all job control threads have been joined
[2025-05-16 18:02:59] 2025-05-16 16:02:43,025 | INFO     | all payload control threads have been joined
[2025-05-16 18:02:59] 2025-05-16 16:02:43,090 | INFO     | [job] retrieve thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:43,092 | INFO     | [job] job monitor thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:43,173 | INFO     | [data] copytool_in thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:43,417 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:43,421 | INFO     | [data] control thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:43,431 | INFO     | [job] control thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:43,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 18:02:59] 2025-05-16 16:02:43,589 | INFO     | [job] validate thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:43,761 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:43,803 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:43,846 | INFO     | [payload] failed_post thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:44,031 | INFO     | [payload] control thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:44,183 | INFO     | [payload] validate_post thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:44,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 18:02:59] 2025-05-16 16:02:45,471 | INFO     | [data] copytool_out thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:45,931 | INFO     | [job] queue monitor thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:46,091 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:52,359 | INFO     | job.realtimelogging is not enabled
[2025-05-16 18:02:59] 2025-05-16 16:02:53,364 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 18:02:59] 2025-05-16 16:02:54,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22706886494016)>', '<ExcThread(monitor, started 22706651100928)>']
[2025-05-16 18:02:59] 2025-05-16 16:02:55,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 18:02:59] 2025-05-16 16:02:55,142 | INFO     | [monitor] control thread has ended
[2025-05-16 18:02:59] 2025-05-16 16:02:59,665 | INFO     | all workflow threads have been joined
[2025-05-16 18:02:59] 2025-05-16 16:02:59,665 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 18:02:59] 2025-05-16 16:02:59,665 | INFO     | traces error code: 0
[2025-05-16 18:02:59] 2025-05-16 16:02:59,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 18:02:59] 2025-05-16 16:02:59,748 [wrapper] ==== pilot stdout END ====
[2025-05-16 18:02:59] 2025-05-16 16:02:59,751 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 18:02:59] 2025-05-16 16:02:59,753 [wrapper] pilotpid: 135733
[2025-05-16 18:02:59] 2025-05-16 16:02:59,756 [wrapper] Pilot exit status: 0
[2025-05-16 18:02:59] 2025-05-16 16:02:59,765 [wrapper] pandaids: 6651102748 6651102748 6651102748
[2025-05-16 18:02:59] 2025-05-16 16:02:59,853 [wrapper] cleanup supervisor_pilot 1460177 135741
[2025-05-16 18:02:59] 2025-05-16 16:02:59,856 [wrapper] Test setup, not cleaning
[2025-05-16 18:02:59] 2025-05-16 16:02:59,858 [wrapper] apfmon messages muted
[2025-05-16 18:02:59] 2025-05-16 16:02:59,861 [wrapper] ==== wrapper stdout END ====
[2025-05-16 18:02:59] 2025-05-16 16:02:59,864 [wrapper] ==== wrapper stderr END ====
[2025-05-16 18:02:59]  *** Error codes and diagnostics ***
[2025-05-16 18:02:59]     "exeErrorCode": 0,
[2025-05-16 18:02:59]     "exeErrorDiag": "",
[2025-05-16 18:02:59]     "pilotErrorCode": 0,
[2025-05-16 18:02:59]     "pilotErrorDiag": "",
[2025-05-16 18:02:59]  *** Listing of results directory ***
[2025-05-16 18:02:59] total 642732
[2025-05-16 18:02:59] drwx------ 4 boinc boinc      4096 Apr  3 10:00 pilot3
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc    495897 May 16 05:50 pilot3.tar.gz
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc      5111 May 16 06:06 queuedata.json
[2025-05-16 18:02:59] -rwx------ 1 boinc boinc     37140 May 16 06:07 runpilot2-wrapper.sh
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc       100 May 16 09:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 18:02:59] -rwxr-xr-x 1 boinc boinc      7986 May 16 09:08 run_atlas
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc       105 May 16 09:08 job.xml
[2025-05-16 18:02:59] -rw-r--r-- 3 boinc boinc 224249434 May 16 09:08 EVNT.44638096._001827.pool.root.1
[2025-05-16 18:02:59] -rw-r--r-- 3 boinc boinc 224249434 May 16 09:08 ATLAS.root_0
[2025-05-16 18:02:59] drwxrwx--x 2 boinc boinc      4096 May 16 09:08 shared
[2025-05-16 18:02:59] -rw-r--r-- 2 boinc boinc    508882 May 16 09:08 input.tar.gz
[2025-05-16 18:02:59] -rw-r--r-- 2 boinc boinc     17569 May 16 09:08 start_atlas.sh
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc         0 May 16 09:08 boinc_lockfile
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc      2540 May 16 14:10 pandaJob.out
[2025-05-16 18:02:59] -rw------- 1 boinc boinc       424 May 16 14:10 setup.sh.local
[2025-05-16 18:02:59] -rw------- 1 boinc boinc    989792 May 16 14:11 agis_schedconf.cvmfs.json
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc      6680 May 16 15:09 init_data.xml
[2025-05-16 18:02:59] -rw------- 1 boinc boinc 202631688 May 16 18:02 HITS.44638099._034281.pool.root.1
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc       532 May 16 18:02 boinc_task_state.xml
[2025-05-16 18:02:59] -rw------- 1 boinc boinc        96 May 16 18:02 pilot_heartbeat.json
[2025-05-16 18:02:59] -rw------- 1 boinc boinc      1038 May 16 18:02 memory_monitor_summary.json
[2025-05-16 18:02:59] -rw------- 1 boinc boinc   1596741 May 16 18:02 agis_ddmendpoints.agis.ALL.json
[2025-05-16 18:02:59] -rw------- 1 boinc boinc    341284 May 16 18:02 log.44638099._034281.job.log.tgz.1
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc      8192 May 16 18:02 boinc_mmap_file
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc        29 May 16 18:02 wrapper_checkpoint.txt
[2025-05-16 18:02:59] -rw------- 1 boinc boinc      7721 May 16 18:02 heartbeat.json
[2025-05-16 18:02:59] -rw------- 1 boinc boinc      4559 May 16 18:02 pilotlog.txt
[2025-05-16 18:02:59] -rw------- 1 boinc boinc   1245414 May 16 18:02 log.44638099._034281.job.log.1
[2025-05-16 18:02:59] -rw------- 1 boinc boinc       357 May 16 18:02 output.list
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc       620 May 16 18:02 runtime_log
[2025-05-16 18:02:59] -rw------- 1 boinc boinc   1607680 May 16 18:02 result.tar.gz
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc     11501 May 16 18:02 runtime_log.err
[2025-05-16 18:02:59] -rw------- 1 boinc boinc       921 May 16 18:02 J9CLDmTX1Z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKVIKDmoMkiTn.diag
[2025-05-16 18:02:59] -rw-r--r-- 1 boinc boinc     24352 May 16 18:02 stderr.txt
[2025-05-16 18:02:59] HITS file was successfully produced:
[2025-05-16 18:02:59] -rw------- 1 boinc boinc 202631688 May 16 18:02 shared/HITS.pool.root.1
[2025-05-16 18:02:59]  *** Contents of shared directory: ***
[2025-05-16 18:02:59] total 418980
[2025-05-16 18:02:59] -rw-r--r-- 3 boinc boinc 224249434 May 16 09:08 ATLAS.root_0
[2025-05-16 18:02:59] -rw-r--r-- 2 boinc boinc    508882 May 16 09:08 input.tar.gz
[2025-05-16 18:02:59] -rw-r--r-- 2 boinc boinc     17569 May 16 09:08 start_atlas.sh
[2025-05-16 18:02:59] -rw------- 1 boinc boinc 202631688 May 16 18:02 HITS.pool.root.1
[2025-05-16 18:02:59] -rw------- 1 boinc boinc   1607680 May 16 18:02 result.tar.gz
18:03:01 (11688): run_atlas exited; CPU time 50717.803849
18:03:01 (11688): called boinc_finish(0)

</stderr_txt>
]]>

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