Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:37:57 (3874077): wrapper (7.7.26015): starting
02:37:57 (3874077): wrapper: running run_atlas (--nthreads 10)
[2025-05-16 02:37:57] Arguments: --nthreads 10
[2025-05-16 02:37:57] Threads: 10
[2025-05-16 02:37:57] Checking for CVMFS
[2025-05-16 02:37:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 02:37:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 02:37:58] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 02:37:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 02:37:59] 2.12.6.0 7820 3621 199172 146055 1 422 39777072 40960001 49272 16776704 0 39326841 99.674 32103691 37399 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-16 02:37:59] CVMFS is ok
[2025-05-16 02:37:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 02:37:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 02:37:59] Further information can be found at the LHC@home message board.
[2025-05-16 02:37:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 02:37:59] Checking for apptainer binary...
[2025-05-16 02:37:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 02:37:59] Running /usr/bin/apptainer --version
[2025-05-16 02:37:59] apptainer version 1.4.0-1.el9
[2025-05-16 02:37:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 02:37:59] c8-7-6.aglt2.org
[2025-05-16 02:37:59] apptainer works
[2025-05-16 02:38:00] Set ATHENA_PROC_NUMBER=10
[2025-05-16 02:38:00] Set ATHENA_CORE_NUMBER=10
[2025-05-16 02:38:00] Starting ATLAS job with PandaID=6651102411
[2025-05-16 02:38:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 05:21:24]  *** The last 200 lines of the pilot log: ***
[2025-05-16 05:21:24] 2025-05-16 09:21:04,195 | INFO     | mean x: 1747382314.62
[2025-05-16 05:21:24] 2025-05-16 09:21:04,195 | INFO     | mean y: 2314213.58
[2025-05-16 05:21:24] 2025-05-16 09:21:04,195 | INFO     | -- intersect: -185376168239.33145
[2025-05-16 05:21:24] 2025-05-16 09:21:04,195 | INFO     | intersect: -185376168239.33145
[2025-05-16 05:21:24] 2025-05-16 09:21:04,195 | INFO     | chi2: 6.629840681647832
[2025-05-16 05:21:24] 2025-05-16 09:21:04,195 | INFO     | current chi2=6.629840681647832 (change=0.2888083541888286 %)
[2025-05-16 05:21:24] 2025-05-16 09:21:04,195 | INFO     | right removable region: 149
[2025-05-16 05:21:24] 2025-05-16 09:21:04,196 | INFO     | sum of square deviations: 1046481587.3399996
[2025-05-16 05:21:24] 2025-05-16 09:21:04,196 | INFO     | sum of deviations: 72404328082.14008
[2025-05-16 05:21:24] 2025-05-16 09:21:04,196 | INFO     | mean x: 1747382619.62
[2025-05-16 05:21:24] 2025-05-16 09:21:04,196 | INFO     | mean y: 2381945.02
[2025-05-16 05:21:24] 2025-05-16 09:21:04,196 | INFO     | -- intersect: -120896127886.94556
[2025-05-16 05:21:24] 2025-05-16 09:21:04,196 | INFO     | intersect: -120896127886.94556
[2025-05-16 05:21:24] 2025-05-16 09:21:04,196 | INFO     | chi2: 3.1328985413177466
[2025-05-16 05:21:24] 2025-05-16 09:21:04,196 | INFO     | current chi2=3.1328985413177466 (change=52.8819677786626 %)
[2025-05-16 05:21:24] 2025-05-16 09:21:04,205 | INFO     | sum of square deviations: 945274199.7655138
[2025-05-16 05:21:24] 2025-05-16 09:21:04,205 | INFO     | sum of deviations: 41728745268.11725
[2025-05-16 05:21:24] 2025-05-16 09:21:04,205 | INFO     | mean x: 1747382772.1241379
[2025-05-16 05:21:24] 2025-05-16 09:21:04,205 | INFO     | mean y: 2428139.9379310347
[2025-05-16 05:21:24] 2025-05-16 09:21:04,205 | INFO     | -- intersect: -77135073975.27097
[2025-05-16 05:21:24] 2025-05-16 09:21:04,205 | INFO     | intersect: -77135073975.27097
[2025-05-16 05:21:24] 2025-05-16 09:21:04,205 | INFO     | chi2: 1.5817929294247355
[2025-05-16 05:21:24] 2025-05-16 09:21:04,205 | INFO     | current chi2=1.5817929294247355 (change=49.510240802135634 %)
[2025-05-16 05:21:24] 2025-05-16 09:21:04,206 | INFO     | sum of square deviations: 850811124.6857142
[2025-05-16 05:21:24] 2025-05-16 09:21:04,206 | INFO     | sum of deviations: 13563761100.428576
[2025-05-16 05:21:24] 2025-05-16 09:21:04,206 | INFO     | mean x: 1747382924.6285715
[2025-05-16 05:21:24] 2025-05-16 09:21:04,206 | INFO     | mean y: 2473510.1428571427
[2025-05-16 05:21:24] 2025-05-16 09:21:04,206 | INFO     | -- intersect: -27854572375.787712
[2025-05-16 05:21:24] 2025-05-16 09:21:04,206 | INFO     | intersect: -27854572375.787712
[2025-05-16 05:21:24] 2025-05-16 09:21:04,206 | INFO     | chi2: 0.1719933959610656
[2025-05-16 05:21:24] 2025-05-16 09:21:04,206 | INFO     | current chi2=0.1719933959610656 (change=89.12668069494939 %)
[2025-05-16 05:21:24] 2025-05-16 09:21:04,206 | INFO     | sum of square deviations: 762859799.5999992
[2025-05-16 05:21:24] 2025-05-16 09:21:04,207 | INFO     | sum of deviations: 3767081328.733334
[2025-05-16 05:21:24] 2025-05-16 09:21:04,207 | INFO     | mean x: 1747383077.1333334
[2025-05-16 05:21:24] 2025-05-16 09:21:04,207 | INFO     | mean y: 2490433.348148148
[2025-05-16 05:21:24] 2025-05-16 09:21:04,207 | INFO     | -- intersect: -8626269618.584187
[2025-05-16 05:21:24] 2025-05-16 09:21:04,207 | INFO     | intersect: -8626269618.584187
[2025-05-16 05:21:24] 2025-05-16 09:21:04,207 | INFO     | chi2: 0.00943835540336258
[2025-05-16 05:21:24] 2025-05-16 09:21:04,207 | INFO     | current chi2=0.00943835540336258 (change=94.5123733672314 %)
[2025-05-16 05:21:24] 2025-05-16 09:21:04,207 | INFO     | sum of square deviations: 681187662.0076909
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | sum of deviations: 3804539828.0153856
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | mean x: 1747383229.6384616
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | mean y: 2490339.2769230767
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | -- intersect: -9756918796.777899
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | intersect: -9756918796.777899
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | chi2: 0.008252359095517067
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | current chi2=0.008252359095517067 (change=12.565709354650714 %)
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | left removable region: 50
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | sum of square deviations: 300839571.2929288
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | sum of deviations: 1869976123.8585856
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | mean x: 1747383809.131313
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | mean y: 2492915.626262626
[2025-05-16 05:21:24] 2025-05-16 09:21:04,208 | INFO     | -- intersect: -10858997107.941748
[2025-05-16 05:21:24] 2025-05-16 09:21:04,220 | INFO     | intersect: -10858997107.941748
[2025-05-16 05:21:24] 2025-05-16 09:21:04,220 | INFO     | chi2: 0.0007800000789280233
[2025-05-16 05:21:24] 2025-05-16 09:21:04,220 | INFO     | -- intersect: -10858997107.941748
[2025-05-16 05:21:24] 2025-05-16 09:21:04,220 | INFO     | current memory leak: 6.22 B/s (using 99 data points, chi2=0.00)
[2025-05-16 05:21:24] 2025-05-16 09:21:04,221 | INFO     | ..............................
[2025-05-16 05:21:24] 2025-05-16 09:21:04,221 | INFO     | . Timing measurements:
[2025-05-16 05:21:24] 2025-05-16 09:21:04,221 | INFO     | . get job = 0 s
[2025-05-16 05:21:24] 2025-05-16 09:21:04,221 | INFO     | . initial setup = 6 s
[2025-05-16 05:21:24] 2025-05-16 09:21:04,221 | INFO     | . payload setup = 65 s
[2025-05-16 05:21:24] 2025-05-16 09:21:04,221 | INFO     | . stage-in = 0 s
[2025-05-16 05:21:24] 2025-05-16 09:21:04,221 | INFO     | . payload execution = 9499 s
[2025-05-16 05:21:24] 2025-05-16 09:21:04,221 | INFO     | . stage-out = 3 s
[2025-05-16 05:21:24] 2025-05-16 09:21:04,221 | INFO     | . log creation = 0 s
[2025-05-16 05:21:24] 2025-05-16 09:21:04,221 | INFO     | ..............................
[2025-05-16 05:21:24] 2025-05-16 09:21:04,464 | INFO     | 
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | job summary report
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | --------------------------------------------------
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | PanDA job id: 6651102411
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | task id: 44638099
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | errors: (none)
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | pilot state: finished 
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | transexitcode: 0
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | exeerrorcode: 0
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | exeerrordiag: 
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | exitcode: 0
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | exitmsg: OK
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | cpuconsumptiontime: 28020 s
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | nevents: 400
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | neventsw: 0
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | pid: 4019324
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | pgrp: 4019324
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | corecount: 10
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | event service: False
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | sizes: {0: 2392884, 1: 2393569, 2: 2393768, 3: 2393768, 13: 2393796, 24: 2393852, 35: 2394008, 37: 2394242, 46: 2394270, 9569: 2422412, 9570: 2422411, 9575: 243168
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | --------------------------------------------------
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | 
[2025-05-16 05:21:24] 2025-05-16 09:21:04,465 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,617 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,618 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 05:21:24] 2025-05-16 09:21:04,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,618 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 05:21:24] 2025-05-16 09:21:04,618 | INFO     | job 6651102411 has completed (purged errors)
[2025-05-16 05:21:24] 2025-05-16 09:21:04,618 | INFO     | overall cleanup function is called
[2025-05-16 05:21:24] 2025-05-16 09:21:05,625 | INFO     | --- collectZombieJob: --- 10, [4019324]
[2025-05-16 05:21:24] 2025-05-16 09:21:05,626 | INFO     | zombie collector waiting for pid 4019324
[2025-05-16 05:21:24] 2025-05-16 09:21:05,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 05:21:24] 2025-05-16 09:21:05,626 | INFO     | collected zombie processes
[2025-05-16 05:21:24] 2025-05-16 09:21:05,626 | INFO     | will attempt to kill all subprocesses of pid=4019324
[2025-05-16 05:21:24] 2025-05-16 09:21:07,394 | INFO     | process IDs to be killed: [4019324] (in reverse order)
[2025-05-16 05:21:24] 2025-05-16 09:21:08,106 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 05:21:24] 2025-05-16 09:21:08,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 05:21:24] 2025-05-16 09:21:08,153 | INFO     | did not find any defunct processes belonging to 4019324
[2025-05-16 05:21:24] 2025-05-16 09:21:08,204 | INFO     | did not find any defunct processes belonging to 4019324
[2025-05-16 05:21:24] 2025-05-16 09:21:08,204 | INFO     | ready for new job
[2025-05-16 05:21:24] 2025-05-16 09:21:08,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 05:21:24] 2025-05-16 09:21:08,207 | INFO     | **************************************
[2025-05-16 05:21:24] 2025-05-16 09:21:08,208 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 05:21:24] 2025-05-16 09:21:08,208 | INFO     | **************************************
[2025-05-16 05:21:24] 2025-05-16 09:21:08,208 | INFO     | 
[2025-05-16 05:21:24] 2025-05-16 09:21:08,221 | INFO     | architecture information:
[2025-05-16 05:21:24] 2025-05-16 09:21:08,246 | INFO     | executing command: cat /etc/os-release
[2025-05-16 05:21:24] 2025-05-16 09:21:08,324 | INFO     | cat /etc/os-release:
[2025-05-16 05:21:24] NAME="CentOS Linux"
[2025-05-16 05:21:24] VERSION="7 (Core)"
[2025-05-16 05:21:24] ID="centos"
[2025-05-16 05:21:24] ID_LIKE="rhel fedora"
[2025-05-16 05:21:24] VERSION_ID="7"
[2025-05-16 05:21:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 05:21:24] ANSI_COLOR="0;31"
[2025-05-16 05:21:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 05:21:24] HOME_URL="https://www.centos.org/"
[2025-05-16 05:21:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 05:21:24] 
[2025-05-16 05:21:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 05:21:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 05:21:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 05:21:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 05:21:24] 
[2025-05-16 05:21:24] 2025-05-16 09:21:08,324 | INFO     | **************************************
[2025-05-16 05:21:24] 2025-05-16 09:21:08,828 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-16 05:21:24] 2025-05-16 09:21:08,936 | INFO     | sufficient remaining disk space (170197516288 B)
[2025-05-16 05:21:24] 2025-05-16 09:21:08,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 05:21:24] 2025-05-16 09:21:08,936 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 05:21:24] 2025-05-16 09:21:08,936 | INFO     | update_server=False
[2025-05-16 05:21:24] 2025-05-16 09:21:08,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 05:21:24] 2025-05-16 09:21:08,936 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-16 05:21:24] 2025-05-16 09:21:08,937 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 05:21:24] 2025-05-16 09:21:08,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 05:21:24] 2025-05-16 09:21:08,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 05:21:24] 2025-05-16 09:21:08,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 05:21:24] 2025-05-16 09:21:08,938 | INFO     | aborting loop
[2025-05-16 05:21:24] 2025-05-16 09:21:09,196 | INFO     | all payload control threads have been joined
[2025-05-16 05:21:24] 2025-05-16 09:21:09,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 05:21:24] 2025-05-16 09:21:09,504 | INFO     | all job control threads have been joined
[2025-05-16 05:21:24] 2025-05-16 09:21:09,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 05:21:24] 2025-05-16 09:21:09,769 | INFO     | all data control threads have been joined
[2025-05-16 05:21:24] 2025-05-16 09:21:09,943 | INFO     | [job] retrieve thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:09,944 | INFO     | [job] job monitor thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:10,203 | INFO     | [payload] control thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:10,374 | INFO     | [data] copytool_in thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:10,375 | INFO     | [payload] failed_post thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:10,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:10,456 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:10,464 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:10,475 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:10,485 | INFO     | [job] queue monitor thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:10,514 | INFO     | [job] control thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:10,776 | INFO     | [data] control thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:10,926 | INFO     | [job] validate thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:11,329 | INFO     | [payload] validate_post thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:11,706 | INFO     | [data] copytool_out thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:11,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 05:21:24] 2025-05-16 09:21:15,732 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 05:21:24] 2025-05-16 09:21:16,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044199081792)>', '<ExcThread(monitor, started 140043557521152)>']
[2025-05-16 05:21:24] 2025-05-16 09:21:17,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 05:21:24] 2025-05-16 09:21:17,037 | INFO     | [monitor] control thread has ended
[2025-05-16 05:21:24] 2025-05-16 09:21:21,752 | INFO     | all workflow threads have been joined
[2025-05-16 05:21:24] 2025-05-16 09:21:21,753 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 05:21:24] 2025-05-16 09:21:21,753 | INFO     | traces error code: 0
[2025-05-16 05:21:24] 2025-05-16 09:21:21,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 05:21:24] 2025-05-16 09:21:22,178 [wrapper] ==== pilot stdout END ====
[2025-05-16 05:21:24] 2025-05-16 09:21:22,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 05:21:24] 2025-05-16 09:21:22,263 [wrapper] pilotpid: 3914449
[2025-05-16 05:21:24] 2025-05-16 09:21:22,297 [wrapper] Pilot exit status: 0
[2025-05-16 05:21:24] 2025-05-16 09:21:22,401 [wrapper] pandaids: 6651102411
[2025-05-16 05:21:24] 2025-05-16 09:21:23,353 [wrapper] cleanup supervisor_pilot  193469 3914450
[2025-05-16 05:21:24] 2025-05-16 09:21:23,371 [wrapper] Test setup, not cleaning
[2025-05-16 05:21:24] 2025-05-16 09:21:23,435 [wrapper] apfmon messages muted
[2025-05-16 05:21:24] 2025-05-16 09:21:23,450 [wrapper] ==== wrapper stdout END ====
[2025-05-16 05:21:24] 2025-05-16 09:21:23,534 [wrapper] ==== wrapper stderr END ====
[2025-05-16 05:21:24]  *** Error codes and diagnostics ***
[2025-05-16 05:21:24]     "exeErrorCode": 0,
[2025-05-16 05:21:24]     "exeErrorDiag": "",
[2025-05-16 05:21:24]     "pilotErrorCode": 0,
[2025-05-16 05:21:24]     "pilotErrorDiag": "",
[2025-05-16 05:21:24]  *** Listing of results directory ***
[2025-05-16 05:21:24] total 412980
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas    495897 May 15 23:18 pilot3.tar.gz
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas      5111 May 15 23:40 queuedata.json
[2025-05-16 05:21:24] -rwx------. 1 boincer umatlas     37140 May 15 23:41 runpilot2-wrapper.sh
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas       100 May 16 02:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 05:21:24] -rwxr-xr-x. 1 boincer umatlas      7986 May 16 02:37 run_atlas
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas       105 May 16 02:37 job.xml
[2025-05-16 05:21:24] -rw-r--r--. 2 boincer umatlas 223591378 May 16 02:37 EVNT.44638096._001814.pool.root.1
[2025-05-16 05:21:24] -rw-r--r--. 2 boincer umatlas     17569 May 16 02:37 start_atlas.sh
[2025-05-16 05:21:24] drwxrwx--x. 2 boincer umatlas      4096 May 16 02:37 shared
[2025-05-16 05:21:24] -rw-r--r--. 2 boincer umatlas    508884 May 16 02:37 input.tar.gz
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas         0 May 16 02:37 boinc_lockfile
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas      2539 May 16 02:38 pandaJob.out
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas       467 May 16 02:38 setup.sh.local
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas    989800 May 16 02:39 agis_schedconf.cvmfs.json
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas   1596741 May 16 02:39 agis_ddmendpoints.agis.ALL.json
[2025-05-16 05:21:24] drwx------. 4 boincer umatlas      4096 May 16 02:39 pilot3
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas      7159 May 16 05:18 init_data.xml
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas 193190679 May 16 05:19 HITS.44638099._033951.pool.root.1
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas       530 May 16 05:19 boinc_task_state.xml
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas      1057 May 16 05:20 memory_monitor_summary.json
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas    378607 May 16 05:20 log.44638099._033951.job.log.tgz.1
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas      7709 May 16 05:21 heartbeat.json
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas        95 May 16 05:21 pilot_heartbeat.json
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas      4477 May 16 05:21 pilotlog.txt
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas      8192 May 16 05:21 boinc_mmap_file
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas    755049 May 16 05:21 log.44638099._033951.job.log.1
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas        27 May 16 05:21 wrapper_checkpoint.txt
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas       357 May 16 05:21 output.list
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas       620 May 16 05:21 runtime_log
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas   1157120 May 16 05:21 result.tar.gz
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas     11410 May 16 05:21 runtime_log.err
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas       656 May 16 05:21 3o8MDmx70Z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJTIKDmXROM9n.diag
[2025-05-16 05:21:24] -rw-r--r--. 1 boincer umatlas     20906 May 16 05:21 stderr.txt
[2025-05-16 05:21:24] HITS file was successfully produced:
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas 193190679 May 16 05:19 shared/HITS.pool.root.1
[2025-05-16 05:21:24]  *** Contents of shared directory: ***
[2025-05-16 05:21:24] total 408672
[2025-05-16 05:21:24] -rw-r--r--. 2 boincer umatlas 223591378 May 16 02:37 ATLAS.root_0
[2025-05-16 05:21:24] -rw-r--r--. 2 boincer umatlas     17569 May 16 02:37 start_atlas.sh
[2025-05-16 05:21:24] -rw-r--r--. 2 boincer umatlas    508884 May 16 02:37 input.tar.gz
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas 193190679 May 16 05:19 HITS.pool.root.1
[2025-05-16 05:21:24] -rw-------. 1 boincer umatlas   1157120 May 16 05:21 result.tar.gz
05:21:25 (3874077): run_atlas exited; CPU time 28369.850362
05:21:25 (3874077): called boinc_finish(0)

</stderr_txt>
]]>

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