Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:12:12 (640042): wrapper (7.7.26015): starting
11:12:12 (640042): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 11:12:12] Arguments: --nthreads 4
[2025-05-16 11:12:12] Threads: 4
[2025-05-16 11:12:12] Checking for CVMFS
[2025-05-16 11:12:12] No cvmfs_config command found, will try listing directly
[2025-05-16 11:12:12] CVMFS is ok
[2025-05-16 11:12:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 11:12:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 11:12:12] Further information can be found at the LHC@home message board.
[2025-05-16 11:12:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 11:12:12] Checking for apptainer binary...
[2025-05-16 11:12:12] which: no apptainer in ((null))
[2025-05-16 11:12:12] apptainer is not installed, using version from CVMFS
[2025-05-16 11:12:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 11:12:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-05-16 11:12:12] apptainer works
[2025-05-16 11:12:12] Set ATHENA_PROC_NUMBER=4
[2025-05-16 11:12:12] Set ATHENA_CORE_NUMBER=4
[2025-05-16 11:12:12] Starting ATLAS job with PandaID=6650552931
[2025-05-16 11:12:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:23:26 (13027): wrapper (7.7.26015): starting
12:23:26 (13027): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 12:23:26] Arguments: --nthreads 4
[2025-05-16 12:23:26] Threads: 4
[2025-05-16 12:23:26] This job has been restarted, cleaning up previous attempt
[2025-05-16 12:23:26] Checking for CVMFS
[2025-05-16 12:23:26] No cvmfs_config command found, will try listing directly
[2025-05-16 12:24:14] CVMFS is ok
[2025-05-16 12:24:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 12:24:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 12:24:14] Further information can be found at the LHC@home message board.
[2025-05-16 12:24:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 12:24:14] Checking for apptainer binary...
[2025-05-16 12:24:14] which: no apptainer in ((null))
[2025-05-16 12:24:14] apptainer is not installed, using version from CVMFS
[2025-05-16 12:24:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 12:24:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-05-16 12:24:14] apptainer works
[2025-05-16 12:24:14] Set ATHENA_PROC_NUMBER=4
[2025-05-16 12:24:14] Set ATHENA_CORE_NUMBER=4
[2025-05-16 12:24:14] Starting ATLAS job with PandaID=6650552931
[2025-05-16 12:24:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:06:09 (7199): wrapper (7.7.26015): starting
14:06:09 (7199): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 14:06:09] Arguments: --nthreads 4
[2025-05-16 14:06:09] Threads: 4
[2025-05-16 14:06:09] This job has been restarted, cleaning up previous attempt
[2025-05-16 14:06:09] Checking for CVMFS
[2025-05-16 14:06:09] No cvmfs_config command found, will try listing directly
[2025-05-16 14:06:09] CVMFS is ok
[2025-05-16 14:06:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 14:06:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 14:06:09] Further information can be found at the LHC@home message board.
[2025-05-16 14:06:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 14:06:09] Checking for apptainer binary...
[2025-05-16 14:06:09] which: no apptainer in ((null))
[2025-05-16 14:06:09] apptainer is not installed, using version from CVMFS
[2025-05-16 14:06:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 14:06:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-05-16 14:06:10] apptainer works
[2025-05-16 14:06:10] Set ATHENA_PROC_NUMBER=4
[2025-05-16 14:06:10] Set ATHENA_CORE_NUMBER=4
[2025-05-16 14:06:10] Starting ATLAS job with PandaID=6650552931
[2025-05-16 14:06:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 18:19:23]  *** The last 200 lines of the pilot log: ***
[2025-05-16 18:19:23] 2025-05-16 16:19:04,204 | INFO     | -- intersect: -38565295815.79549
[2025-05-16 18:19:23] 2025-05-16 16:19:04,204 | INFO     | intersect: -38565295815.79549
[2025-05-16 18:19:23] 2025-05-16 16:19:04,204 | INFO     | chi2: 4.979199464355845
[2025-05-16 18:19:23] 2025-05-16 16:19:04,205 | INFO     | sum of square deviations: 4504437945.0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,206 | INFO     | sum of deviations: 118740226093.49998
[2025-05-16 18:19:23] 2025-05-16 16:19:04,206 | INFO     | mean x: 1747404615.5
[2025-05-16 18:19:23] 2025-05-16 16:19:04,206 | INFO     | mean y: 2267918.545081967
[2025-05-16 18:19:23] 2025-05-16 16:19:04,206 | INFO     | -- intersect: -46060575360.62799
[2025-05-16 18:19:23] 2025-05-16 16:19:04,207 | INFO     | intersect: -46060575360.62799
[2025-05-16 18:19:23] 2025-05-16 16:19:04,207 | INFO     | chi2: 4.185814065523423
[2025-05-16 18:19:23] 2025-05-16 16:19:04,207 | INFO     | current chi2=4.185814065523423 (change=15.933995103268305 %)
[2025-05-16 18:19:23] 2025-05-16 16:19:04,207 | INFO     | right removable region: 243
[2025-05-16 18:19:23] 2025-05-16 16:19:04,207 | INFO     | sum of square deviations: 4504437945.0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,209 | INFO     | sum of deviations: 47596083076.99999
[2025-05-16 18:19:23] 2025-05-16 16:19:04,209 | INFO     | mean x: 1747404920.5
[2025-05-16 18:19:23] 2025-05-16 16:19:04,209 | INFO     | mean y: 2292257.7786885244
[2025-05-16 18:19:23] 2025-05-16 16:19:04,209 | INFO     | -- intersect: -18461638377.029194
[2025-05-16 18:19:23] 2025-05-16 16:19:04,209 | INFO     | intersect: -18461638377.029194
[2025-05-16 18:19:23] 2025-05-16 16:19:04,210 | INFO     | chi2: 2.4428065243222052
[2025-05-16 18:19:23] 2025-05-16 16:19:04,210 | INFO     | current chi2=2.4428065243222052 (change=50.93977371645164 %)
[2025-05-16 18:19:23] 2025-05-16 16:19:04,210 | INFO     | sum of square deviations: 4233158440.0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,212 | INFO     | sum of deviations: 66189880.0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,212 | INFO     | mean x: 1747405073.0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,212 | INFO     | mean y: 2318981.422594142
[2025-05-16 18:19:23] 2025-05-16 16:19:04,212 | INFO     | -- intersect: -25003532.89682293
[2025-05-16 18:19:23] 2025-05-16 16:19:04,212 | INFO     | intersect: -25003532.89682293
[2025-05-16 18:19:23] 2025-05-16 16:19:04,213 | INFO     | chi2: 0.8861116632974682
[2025-05-16 18:19:23] 2025-05-16 16:19:04,213 | INFO     | current chi2=0.8861116632974682 (change=63.72567149814152 %)
[2025-05-16 18:19:23] 2025-05-16 16:19:04,213 | INFO     | sum of square deviations: 3972995422.5
[2025-05-16 18:19:23] 2025-05-16 16:19:04,215 | INFO     | sum of deviations: -7640836423.500003
[2025-05-16 18:19:23] 2025-05-16 16:19:04,215 | INFO     | mean x: 1747405225.5
[2025-05-16 18:19:23] 2025-05-16 16:19:04,215 | INFO     | mean y: 2323471.3803418805
[2025-05-16 18:19:23] 2025-05-16 16:19:04,215 | INFO     | -- intersect: 3362920722.0092244
[2025-05-16 18:19:23] 2025-05-16 16:19:04,215 | INFO     | intersect: 3362920722.0092244
[2025-05-16 18:19:23] 2025-05-16 16:19:04,215 | INFO     | chi2: 0.832550227216769
[2025-05-16 18:19:23] 2025-05-16 16:19:04,216 | INFO     | current chi2=0.832550227216769 (change=6.044547013565104 %)
[2025-05-16 18:19:23] 2025-05-16 16:19:04,216 | INFO     | left removable region: 30
[2025-05-16 18:19:23] 2025-05-16 16:19:04,216 | INFO     | sum of square deviations: 2996454322.0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,217 | INFO     | sum of deviations: 3504754633.9999995
[2025-05-16 18:19:23] 2025-05-16 16:19:04,218 | INFO     | mean x: 1747405500.0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,218 | INFO     | mean y: 2334305.3427230045
[2025-05-16 18:19:23] 2025-05-16 16:19:04,218 | INFO     | -- intersect: -2041490450.6824036
[2025-05-16 18:19:23] 2025-05-16 16:19:04,218 | INFO     | intersect: -2041490450.6824036
[2025-05-16 18:19:23] 2025-05-16 16:19:04,218 | INFO     | chi2: 0.0009538273373987743
[2025-05-16 18:19:23] 2025-05-16 16:19:04,218 | INFO     | -- intersect: -2041490450.6824036
[2025-05-16 18:19:23] 2025-05-16 16:19:04,218 | INFO     | current memory leak: 1.17 B/s (using 213 data points, chi2=0.00)
[2025-05-16 18:19:23] 2025-05-16 16:19:04,219 | INFO     | ..............................
[2025-05-16 18:19:23] 2025-05-16 16:19:04,219 | INFO     | . Timing measurements:
[2025-05-16 18:19:23] 2025-05-16 16:19:04,219 | INFO     | . get job = 0 s
[2025-05-16 18:19:23] 2025-05-16 16:19:04,219 | INFO     | . initial setup = 0 s
[2025-05-16 18:19:23] 2025-05-16 16:19:04,219 | INFO     | . payload setup = 4 s
[2025-05-16 18:19:23] 2025-05-16 16:19:04,219 | INFO     | . stage-in = 0 s
[2025-05-16 18:19:23] 2025-05-16 16:19:04,219 | INFO     | . payload execution = 15137 s
[2025-05-16 18:19:23] 2025-05-16 16:19:04,219 | INFO     | . stage-out = 0 s
[2025-05-16 18:19:23] 2025-05-16 16:19:04,219 | INFO     | . log creation = 0 s
[2025-05-16 18:19:23] 2025-05-16 16:19:04,220 | INFO     | ..............................
[2025-05-16 18:19:23] 2025-05-16 16:19:04,282 | INFO     | 
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | job summary report
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | --------------------------------------------------
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | PanDA job id: 6650552931
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | task id: 44638099
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | errors: (none)
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | pilot state: finished 
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | transexitcode: 0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | exeerrorcode: 0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | exeerrordiag: 
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | exitcode: 0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,283 | INFO     | exitmsg: OK
[2025-05-16 18:19:23] 2025-05-16 16:19:04,284 | INFO     | cpuconsumptiontime: 55912 s
[2025-05-16 18:19:23] 2025-05-16 16:19:04,284 | INFO     | nevents: 400
[2025-05-16 18:19:23] 2025-05-16 16:19:04,284 | INFO     | neventsw: 0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,284 | INFO     | pid: 171666
[2025-05-16 18:19:23] 2025-05-16 16:19:04,284 | INFO     | pgrp: 171666
[2025-05-16 18:19:23] 2025-05-16 16:19:04,284 | INFO     | corecount: 4
[2025-05-16 18:19:23] 2025-05-16 16:19:04,284 | INFO     | event service: False
[2025-05-16 18:19:23] 2025-05-16 16:19:04,284 | INFO     | sizes: {0: 2393502, 1: 2393701, 4: 2393907, 11: 2393935, 15146: 2424710, 15147: 2433673, 15148: 2433857, 15150: 2434027}
[2025-05-16 18:19:23] 2025-05-16 16:19:04,284 | INFO     | --------------------------------------------------
[2025-05-16 18:19:23] 2025-05-16 16:19:04,284 | INFO     | 
[2025-05-16 18:19:23] 2025-05-16 16:19:04,284 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-05-16 18:19:23] 2025-05-16 16:19:04,297 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,297 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,297 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,297 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | job 6650552931 has completed (purged errors)
[2025-05-16 18:19:23] 2025-05-16 16:19:04,298 | INFO     | overall cleanup function is called
[2025-05-16 18:19:23] 2025-05-16 16:19:05,304 | INFO     | --- collectZombieJob: --- 10, [171666]
[2025-05-16 18:19:23] 2025-05-16 16:19:05,305 | INFO     | zombie collector waiting for pid 171666
[2025-05-16 18:19:23] 2025-05-16 16:19:05,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 18:19:23] 2025-05-16 16:19:05,305 | INFO     | collected zombie processes
[2025-05-16 18:19:23] 2025-05-16 16:19:05,305 | INFO     | will attempt to kill all subprocesses of pid=171666
[2025-05-16 18:19:23] 2025-05-16 16:19:05,501 | INFO     | process IDs to be killed: [171666] (in reverse order)
[2025-05-16 18:19:23] 2025-05-16 16:19:05,569 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 18:19:23] 2025-05-16 16:19:05,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 18:19:23] 2025-05-16 16:19:05,584 | INFO     | did not find any defunct processes belonging to 171666
[2025-05-16 18:19:23] 2025-05-16 16:19:05,599 | INFO     | did not find any defunct processes belonging to 171666
[2025-05-16 18:19:23] 2025-05-16 16:19:05,599 | INFO     | ready for new job
[2025-05-16 18:19:23] 2025-05-16 16:19:05,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 18:19:23] 2025-05-16 16:19:05,601 | INFO     | **************************************
[2025-05-16 18:19:23] 2025-05-16 16:19:05,601 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 18:19:23] 2025-05-16 16:19:05,601 | INFO     | **************************************
[2025-05-16 18:19:23] 2025-05-16 16:19:05,601 | INFO     | 
[2025-05-16 18:19:23] 2025-05-16 16:19:05,604 | INFO     | architecture information:
[2025-05-16 18:19:23] 2025-05-16 16:19:05,605 | INFO     | executing command: cat /etc/os-release
[2025-05-16 18:19:23] 2025-05-16 16:19:05,613 | INFO     | cat /etc/os-release:
[2025-05-16 18:19:23] NAME="CentOS Linux"
[2025-05-16 18:19:23] VERSION="7 (Core)"
[2025-05-16 18:19:23] ID="centos"
[2025-05-16 18:19:23] ID_LIKE="rhel fedora"
[2025-05-16 18:19:23] VERSION_ID="7"
[2025-05-16 18:19:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 18:19:23] ANSI_COLOR="0;31"
[2025-05-16 18:19:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 18:19:23] HOME_URL="https://www.centos.org/"
[2025-05-16 18:19:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 18:19:23] 
[2025-05-16 18:19:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 18:19:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 18:19:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 18:19:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 18:19:23] 
[2025-05-16 18:19:23] 2025-05-16 16:19:05,613 | INFO     | **************************************
[2025-05-16 18:19:23] 2025-05-16 16:19:05,723 | WARNING  | process 171666 can no longer be monitored (due to stat problems) - aborting
[2025-05-16 18:19:23] 2025-05-16 16:19:05,862 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-05-16 18:19:23] 2025-05-16 16:19:05,862 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6650552931/payload.stdout) since it has not been created yet
[2025-05-16 18:19:23] 2025-05-16 16:19:05,862 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-05-16 18:19:23] 2025-05-16 16:19:05,872 | INFO     | sufficient remaining disk space (701445963776 B)
[2025-05-16 18:19:23] 2025-05-16 16:19:05,872 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-05-16 18:19:23] 2025-05-16 16:19:05,872 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6650552931/HITS.44638099._027712.pool.root.1 since it does not exist
[2025-05-16 18:19:23] 2025-05-16 16:19:06,081 | INFO     | number of running child processes to parent process 171666: 1
[2025-05-16 18:19:23] 2025-05-16 16:19:06,081 | INFO     | maximum number of monitored processes: 6
[2025-05-16 18:19:23] 2025-05-16 16:19:06,082 | INFO     | aborting job monitoring since job object (job id=6650552931) has expired
[2025-05-16 18:19:23] 2025-05-16 16:19:06,116 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-05-16 18:19:23] 2025-05-16 16:19:06,124 | INFO     | sufficient remaining disk space (701445963776 B)
[2025-05-16 18:19:23] 2025-05-16 16:19:06,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 18:19:23] 2025-05-16 16:19:06,124 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 18:19:23] 2025-05-16 16:19:06,125 | INFO     | update_server=False
[2025-05-16 18:19:23] 2025-05-16 16:19:06,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 18:19:23] 2025-05-16 16:19:06,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 18:19:23] 2025-05-16 16:19:06,125 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-16 18:19:23] 2025-05-16 16:19:06,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 18:19:23] 2025-05-16 16:19:06,125 | INFO     | will abort loop
[2025-05-16 18:19:23] 2025-05-16 16:19:06,126 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 18:19:23] 2025-05-16 16:19:06,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 18:19:23] 2025-05-16 16:19:06,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 18:19:23] 2025-05-16 16:19:06,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 18:19:23] 2025-05-16 16:19:06,480 | INFO     | all payload control threads have been joined
[2025-05-16 18:19:23] 2025-05-16 16:19:07,084 | INFO     | all data control threads have been joined
[2025-05-16 18:19:23] 2025-05-16 16:19:07,130 | INFO     | [job] retrieve thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:07,131 | INFO     | [job] queue monitor thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:07,131 | INFO     | [job] job monitor thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:07,183 | INFO     | all job control threads have been joined
[2025-05-16 18:19:23] 2025-05-16 16:19:07,486 | INFO     | [payload] control thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:07,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 18:19:23] 2025-05-16 16:19:07,863 | INFO     | [payload] failed_post thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:07,961 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:08,089 | INFO     | [data] control thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:08,188 | INFO     | [job] control thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:08,224 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:08,282 | INFO     | [job] validate thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:08,457 | INFO     | [data] copytool_out thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:08,506 | INFO     | [payload] validate_post thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:08,514 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:08,528 | INFO     | [data] copytool_in thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:11,532 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:16,514 | INFO     | job.realtimelogging is not enabled
[2025-05-16 18:19:23] 2025-05-16 16:19:17,519 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 18:19:23] 2025-05-16 16:19:18,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22487183443776)>', '<ExcThread(monitor, started 22486953465600)>']
[2025-05-16 18:19:23] 2025-05-16 16:19:19,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 18:19:23] 2025-05-16 16:19:19,191 | INFO     | [monitor] control thread has ended
[2025-05-16 18:19:23] 2025-05-16 16:19:23,327 | INFO     | all workflow threads have been joined
[2025-05-16 18:19:23] 2025-05-16 16:19:23,328 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 18:19:23] 2025-05-16 16:19:23,328 | INFO     | traces error code: 0
[2025-05-16 18:19:23] 2025-05-16 16:19:23,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 18:19:23] 2025-05-16 16:19:23,406 [wrapper] ==== pilot stdout END ====
[2025-05-16 18:19:23] 2025-05-16 16:19:23,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 18:19:23] 2025-05-16 16:19:23,409 [wrapper] pilotpid: 66498
[2025-05-16 18:19:23] 2025-05-16 16:19:23,411 [wrapper] Pilot exit status: 0
[2025-05-16 18:19:23] 2025-05-16 16:19:23,417 [wrapper] pandaids: 6650552931 6650552931 6650552931
[2025-05-16 18:19:23] 2025-05-16 16:19:23,456 [wrapper] cleanup supervisor_pilot  618752 66501
[2025-05-16 18:19:23] 2025-05-16 16:19:23,458 [wrapper] Test setup, not cleaning
[2025-05-16 18:19:23] 2025-05-16 16:19:23,460 [wrapper] apfmon messages muted
[2025-05-16 18:19:23] 2025-05-16 16:19:23,462 [wrapper] ==== wrapper stdout END ====
[2025-05-16 18:19:23] 2025-05-16 16:19:23,464 [wrapper] ==== wrapper stderr END ====
[2025-05-16 18:19:23]  *** Error codes and diagnostics ***
[2025-05-16 18:19:23]     "exeErrorCode": 0,
[2025-05-16 18:19:23]     "exeErrorDiag": "",
[2025-05-16 18:19:23]     "pilotErrorCode": 0,
[2025-05-16 18:19:23]     "pilotErrorDiag": "",
[2025-05-16 18:19:23]  *** Listing of results directory ***
[2025-05-16 18:19:23] total 626276
[2025-05-16 18:19:23] drwx------ 4 boinc boinc      4096 Apr  3 10:00 pilot3
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc      5111 May 15 20:20 queuedata.json
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc    495897 May 15 20:20 pilot3.tar.gz
[2025-05-16 18:19:23] -rwx------ 1 boinc boinc     37140 May 15 20:21 runpilot2-wrapper.sh
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc       100 May 16 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 18:19:23] -rwxr-xr-x 1 boinc boinc      7986 May 16 11:12 run_atlas
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc       105 May 16 11:12 job.xml
[2025-05-16 18:19:23] -rw-r--r-- 3 boinc boinc 220480202 May 16 11:12 EVNT.44638096._001679.pool.root.1
[2025-05-16 18:19:23] -rw-r--r-- 3 boinc boinc 220480202 May 16 11:12 ATLAS.root_0
[2025-05-16 18:19:23] -rw-r--r-- 2 boinc boinc     17569 May 16 11:12 start_atlas.sh
[2025-05-16 18:19:23] drwxrwx--x 2 boinc boinc      4096 May 16 11:12 shared
[2025-05-16 18:19:23] -rw-r--r-- 2 boinc boinc    508882 May 16 11:12 input.tar.gz
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc         0 May 16 11:12 boinc_lockfile
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc      2539 May 16 14:06 pandaJob.out
[2025-05-16 18:19:23] -rw------- 1 boinc boinc       424 May 16 14:06 setup.sh.local
[2025-05-16 18:19:23] -rw------- 1 boinc boinc    989792 May 16 14:06 agis_schedconf.cvmfs.json
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc      6639 May 16 17:13 init_data.xml
[2025-05-16 18:19:23] -rw------- 1 boinc boinc        96 May 16 18:18 pilot_heartbeat.json
[2025-05-16 18:19:23] -rw------- 1 boinc boinc 192988234 May 16 18:18 HITS.44638099._027712.pool.root.1
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc       531 May 16 18:18 boinc_task_state.xml
[2025-05-16 18:19:23] -rw------- 1 boinc boinc      1046 May 16 18:18 memory_monitor_summary.json
[2025-05-16 18:19:23] -rw------- 1 boinc boinc   1596741 May 16 18:19 agis_ddmendpoints.agis.ALL.json
[2025-05-16 18:19:23] -rw------- 1 boinc boinc    360371 May 16 18:19 log.44638099._027712.job.log.tgz.1
[2025-05-16 18:19:23] -rw------- 1 boinc boinc      7750 May 16 18:19 heartbeat.json
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc      8192 May 16 18:19 boinc_mmap_file
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc        28 May 16 18:19 wrapper_checkpoint.txt
[2025-05-16 18:19:23] -rw------- 1 boinc boinc      5763 May 16 18:19 pilotlog.txt
[2025-05-16 18:19:23] -rw------- 1 boinc boinc   1392432 May 16 18:19 log.44638099._027712.job.log.1
[2025-05-16 18:19:23] -rw------- 1 boinc boinc       357 May 16 18:19 output.list
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc       620 May 16 18:19 runtime_log
[2025-05-16 18:19:23] -rw------- 1 boinc boinc   1771520 May 16 18:19 result.tar.gz
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc     11501 May 16 18:19 runtime_log.err
[2025-05-16 18:19:23] -rw------- 1 boinc boinc       921 May 16 18:19 P7LNDmsNsZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEyJKDmJ3ojfm.diag
[2025-05-16 18:19:23] -rw-r--r-- 1 boinc boinc     24863 May 16 18:19 stderr.txt
[2025-05-16 18:19:23] HITS file was successfully produced:
[2025-05-16 18:19:23] -rw------- 1 boinc boinc 192988234 May 16 18:18 shared/HITS.pool.root.1
[2025-05-16 18:19:23]  *** Contents of shared directory: ***
[2025-05-16 18:19:23] total 406044
[2025-05-16 18:19:23] -rw-r--r-- 3 boinc boinc 220480202 May 16 11:12 ATLAS.root_0
[2025-05-16 18:19:23] -rw-r--r-- 2 boinc boinc     17569 May 16 11:12 start_atlas.sh
[2025-05-16 18:19:23] -rw-r--r-- 2 boinc boinc    508882 May 16 11:12 input.tar.gz
[2025-05-16 18:19:23] -rw------- 1 boinc boinc 192988234 May 16 18:18 HITS.pool.root.1
[2025-05-16 18:19:23] -rw------- 1 boinc boinc   1771520 May 16 18:19 result.tar.gz
18:19:24 (7199): run_atlas exited; CPU time 56431.315857
18:19:24 (7199): called boinc_finish(0)

</stderr_txt>
]]>

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