Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:48:41 (9882): wrapper (7.7.26015): starting
16:48:41 (9882): wrapper: running run_atlas (--nthreads 8)
[2025-05-16 16:48:41] Arguments: --nthreads 8
[2025-05-16 16:48:41] Threads: 8
[2025-05-16 16:48:41] Checking for CVMFS
[2025-05-16 16:48:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 16:48:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 16:48:42] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 16:48:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 16:48:42] 2.11.2.0 19741 5976 77432 146068 3 153 15205811 25165825 4133 130560 0 4846295 99.751 6466162 1091 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-16 16:48:42] CVMFS is ok
[2025-05-16 16:48:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 16:48:42] Checking for apptainer binary...
[2025-05-16 16:48:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 16:48:42] Running /usr/bin/apptainer --version
[2025-05-16 16:48:42] apptainer version 1.3.2-1.el7
[2025-05-16 16:48:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 16:48:44] cg-vwn339.simple-grid.lan
[2025-05-16 16:48:44] apptainer works
[2025-05-16 16:48:44] Set ATHENA_PROC_NUMBER=8
[2025-05-16 16:48:44] Set ATHENA_CORE_NUMBER=8
[2025-05-16 16:48:44] Starting ATLAS job with PandaID=6650797653
[2025-05-16 16:48:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/33 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 23:21:11]  *** The last 200 lines of the pilot log: ***
[2025-05-16 23:21:11] 2025-05-16 20:10:11,796 | INFO     | mean y: 2449535.4363057325
[2025-05-16 23:21:11] 2025-05-16 20:10:11,796 | INFO     | -- intersect: -21146274028.530647
[2025-05-16 23:21:11] 2025-05-16 20:10:11,797 | INFO     | intersect: -21146274028.530647
[2025-05-16 23:21:11] 2025-05-16 20:10:11,797 | INFO     | chi2: 5.151160357428258
[2025-05-16 23:21:11] 2025-05-16 20:10:11,798 | INFO     | sum of square deviations: 9148487810.0
[2025-05-16 23:21:11] 2025-05-16 20:10:11,801 | INFO     | sum of deviations: 134419843146.0
[2025-05-16 23:21:11] 2025-05-16 20:10:11,801 | INFO     | mean x: 1747416397.0
[2025-05-16 23:21:11] 2025-05-16 20:10:11,801 | INFO     | mean y: 2455606.197411003
[2025-05-16 23:21:11] 2025-05-16 20:10:11,802 | INFO     | -- intersect: -25672545866.585716
[2025-05-16 23:21:11] 2025-05-16 20:10:11,802 | INFO     | intersect: -25672545866.585716
[2025-05-16 23:21:11] 2025-05-16 20:10:11,802 | INFO     | chi2: 4.4009417608373935
[2025-05-16 23:21:11] 2025-05-16 20:10:11,802 | INFO     | current chi2=4.4009417608373935 (change=14.564069928613414 %)
[2025-05-16 23:21:11] 2025-05-16 20:10:11,803 | INFO     | right removable region: 308
[2025-05-16 23:21:11] 2025-05-16 20:10:11,803 | INFO     | sum of square deviations: 9148487810.0
[2025-05-16 23:21:11] 2025-05-16 20:10:11,806 | INFO     | sum of deviations: 35484499100.00003
[2025-05-16 23:21:11] 2025-05-16 20:10:11,807 | INFO     | mean x: 1747416702.0
[2025-05-16 23:21:11] 2025-05-16 20:10:11,807 | INFO     | mean y: 2476742.352750809
[2025-05-16 23:21:11] 2025-05-16 20:10:11,807 | INFO     | -- intersect: -6775277972.657797
[2025-05-16 23:21:11] 2025-05-16 20:10:11,807 | INFO     | intersect: -6775277972.657797
[2025-05-16 23:21:11] 2025-05-16 20:10:11,808 | INFO     | chi2: 2.4593417231650143
[2025-05-16 23:21:11] 2025-05-16 20:10:11,808 | INFO     | current chi2=2.4593417231650143 (change=52.256548961468305 %)
[2025-05-16 23:21:11] 2025-05-16 20:10:11,808 | INFO     | sum of square deviations: 8711530780.0
[2025-05-16 23:21:11] 2025-05-16 20:10:11,811 | INFO     | sum of deviations: -21610698048.499996
[2025-05-16 23:21:11] 2025-05-16 20:10:11,812 | INFO     | mean x: 1747416854.5
[2025-05-16 23:21:11] 2025-05-16 20:10:11,812 | INFO     | mean y: 2496669.259868421
[2025-05-16 23:21:11] 2025-05-16 20:10:11,812 | INFO     | -- intersect: 4337314390.865755
[2025-05-16 23:21:11] 2025-05-16 20:10:11,812 | INFO     | intersect: 4337314390.865755
[2025-05-16 23:21:11] 2025-05-16 20:10:11,813 | INFO     | chi2: 1.219884910236594
[2025-05-16 23:21:11] 2025-05-16 20:10:11,813 | INFO     | current chi2=1.219884910236594 (change=50.397909377689864 %)
[2025-05-16 23:21:11] 2025-05-16 20:10:11,813 | INFO     | sum of square deviations: 8288713550.0
[2025-05-16 23:21:11] 2025-05-16 20:10:11,817 | INFO     | sum of deviations: -42598070464.0
[2025-05-16 23:21:11] 2025-05-16 20:10:11,817 | INFO     | mean x: 1747417007.0
[2025-05-16 23:21:11] 2025-05-16 20:10:11,817 | INFO     | mean y: 2504180.7525083614
[2025-05-16 23:21:11] 2025-05-16 20:10:11,817 | INFO     | -- intersect: 8982980143.054039
[2025-05-16 23:21:11] 2025-05-16 20:10:11,817 | INFO     | intersect: 8982980143.054039
[2025-05-16 23:21:11] 2025-05-16 20:10:11,818 | INFO     | chi2: 0.9061933193708983
[2025-05-16 23:21:11] 2025-05-16 20:10:11,818 | INFO     | current chi2=0.9061933193708983 (change=25.714851313707616 %)
[2025-05-16 23:21:11] 2025-05-16 20:10:11,818 | INFO     | sum of square deviations: 7879803557.5
[2025-05-16 23:21:11] 2025-05-16 20:10:11,821 | INFO     | sum of deviations: -33809402713.500008
[2025-05-16 23:21:11] 2025-05-16 20:10:11,822 | INFO     | mean x: 1747417159.5
[2025-05-16 23:21:11] 2025-05-16 20:10:11,822 | INFO     | mean y: 2500899.343537415
[2025-05-16 23:21:11] 2025-05-16 20:10:11,822 | INFO     | -- intersect: 7500039387.82327
[2025-05-16 23:21:11] 2025-05-16 20:10:11,822 | INFO     | intersect: 7500039387.82327
[2025-05-16 23:21:11] 2025-05-16 20:10:11,823 | INFO     | chi2: 0.8854463261846562
[2025-05-16 23:21:11] 2025-05-16 20:10:11,823 | INFO     | current chi2=0.8854463261846562 (change=2.289466578791945 %)
[2025-05-16 23:21:11] 2025-05-16 20:10:11,823 | INFO     | left removable region: 40
[2025-05-16 23:21:11] 2025-05-16 20:10:11,823 | INFO     | sum of square deviations: 5968658887.0
[2025-05-16 23:21:11] 2025-05-16 20:10:11,826 | INFO     | sum of deviations: 6134777381.000001
[2025-05-16 23:21:11] 2025-05-16 20:10:11,826 | INFO     | mean x: 1747417586.5
[2025-05-16 23:21:11] 2025-05-16 20:10:11,826 | INFO     | mean y: 2499845.776119403
[2025-05-16 23:21:11] 2025-05-16 20:10:11,826 | INFO     | -- intersect: -1793551509.7755406
[2025-05-16 23:21:11] 2025-05-16 20:10:11,827 | INFO     | intersect: -1793551509.7755406
[2025-05-16 23:21:11] 2025-05-16 20:10:11,827 | INFO     | chi2: 0.0006070085699544557
[2025-05-16 23:21:11] 2025-05-16 20:10:11,827 | INFO     | -- intersect: -1793551509.7755406
[2025-05-16 23:21:11] 2025-05-16 20:10:11,827 | INFO     | current memory leak: 1.03 B/s (using 268 data points, chi2=0.00)
[2025-05-16 23:21:11] 2025-05-16 20:10:11,828 | INFO     | ..............................
[2025-05-16 23:21:11] 2025-05-16 20:10:11,828 | INFO     | . Timing measurements:
[2025-05-16 23:21:11] 2025-05-16 20:10:11,829 | INFO     | . get job = 0 s
[2025-05-16 23:21:11] 2025-05-16 20:10:11,829 | INFO     | . initial setup = 2 s
[2025-05-16 23:21:11] 2025-05-16 20:10:11,829 | INFO     | . payload setup = 10 s
[2025-05-16 23:21:11] 2025-05-16 20:10:11,829 | INFO     | . stage-in = 0 s
[2025-05-16 23:21:11] 2025-05-16 20:10:11,829 | INFO     | . payload execution = 19127 s
[2025-05-16 23:21:11] 2025-05-16 20:10:11,829 | INFO     | . stage-out = 3 s
[2025-05-16 23:21:11] 2025-05-16 20:10:11,829 | INFO     | . log creation = 1 s
[2025-05-16 23:21:11] 2025-05-16 20:10:11,829 | INFO     | ..............................
[2025-05-16 23:21:11] 2025-05-16 20:10:12,143 | INFO     | 
[2025-05-16 23:21:11] 2025-05-16 20:10:12,143 | INFO     | job summary report
[2025-05-16 23:21:11] 2025-05-16 20:10:12,143 | INFO     | --------------------------------------------------
[2025-05-16 23:21:11] 2025-05-16 20:10:12,143 | INFO     | PanDA job id: 6650797653
[2025-05-16 23:21:11] 2025-05-16 20:10:12,143 | INFO     | task id: 44638099
[2025-05-16 23:21:11] 2025-05-16 20:10:12,143 | INFO     | errors: (none)
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | pilot state: finished 
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | transexitcode: 0
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | exeerrorcode: 0
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | exeerrordiag: 
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | exitcode: 0
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | exitmsg: OK
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | cpuconsumptiontime: 70183 s
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | nevents: 400
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | neventsw: 0
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | pid: 22121
[2025-05-16 23:21:11] 2025-05-16 20:10:12,144 | INFO     | pgrp: 22121
[2025-05-16 23:21:11] 2025-05-16 20:10:12,145 | INFO     | corecount: 8
[2025-05-16 23:21:11] 2025-05-16 20:10:12,145 | INFO     | event service: False
[2025-05-16 23:21:11] 2025-05-16 20:10:12,145 | INFO     | sizes: {0: 2393541, 1: 2393740, 12: 2393974, 22: 2393974, 19143: 2425880, 19147: 2434823, 19148: 2435007, 19238: 2435177}
[2025-05-16 23:21:11] 2025-05-16 20:10:12,145 | INFO     | --------------------------------------------------
[2025-05-16 23:21:11] 2025-05-16 20:10:12,145 | INFO     | 
[2025-05-16 23:21:11] 2025-05-16 20:10:12,145 | INFO     | executing command: ls -lF /var/lib/boinc/slots/33
[2025-05-16 23:21:11] 2025-05-16 20:10:12,607 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,608 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,610 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 23:21:11] 2025-05-16 20:10:12,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,610 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 23:21:11] 2025-05-16 20:10:12,610 | INFO     | job 6650797653 has completed (purged errors)
[2025-05-16 23:21:11] 2025-05-16 20:10:12,610 | INFO     | overall cleanup function is called
[2025-05-16 23:21:11] 2025-05-16 20:10:13,619 | INFO     | --- collectZombieJob: --- 10, [22121]
[2025-05-16 23:21:11] 2025-05-16 20:10:13,619 | INFO     | zombie collector waiting for pid 22121
[2025-05-16 23:21:11] 2025-05-16 20:10:13,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 23:21:11] 2025-05-16 20:10:13,619 | INFO     | collected zombie processes
[2025-05-16 23:21:11] 2025-05-16 20:10:13,620 | INFO     | will attempt to kill all subprocesses of pid=22121
[2025-05-16 23:21:11] 2025-05-16 20:10:13,745 | INFO     | process IDs to be killed: [22121] (in reverse order)
[2025-05-16 23:21:11] 2025-05-16 20:10:14,445 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 23:21:11] 2025-05-16 20:10:14,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 23:21:11] 2025-05-16 20:10:14,448 | INFO     | did not find any defunct processes belonging to 22121
[2025-05-16 23:21:11] 2025-05-16 20:10:14,452 | INFO     | did not find any defunct processes belonging to 22121
[2025-05-16 23:21:11] 2025-05-16 20:10:14,452 | INFO     | ready for new job
[2025-05-16 23:21:11] 2025-05-16 20:10:14,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 23:21:11] 2025-05-16 20:10:14,455 | INFO     | **************************************
[2025-05-16 23:21:11] 2025-05-16 20:10:14,455 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 23:21:11] 2025-05-16 20:10:14,455 | INFO     | **************************************
[2025-05-16 23:21:11] 2025-05-16 20:10:14,455 | INFO     | 
[2025-05-16 23:21:11] 2025-05-16 20:10:14,456 | INFO     | pilot is running in a VM
[2025-05-16 23:21:11] 2025-05-16 20:10:14,456 | INFO     | architecture information:
[2025-05-16 23:21:11] 2025-05-16 20:10:14,472 | INFO     | executing command: cat /etc/os-release
[2025-05-16 23:21:11] 2025-05-16 20:10:14,756 | INFO     | cat /etc/os-release:
[2025-05-16 23:21:11] NAME="CentOS Linux"
[2025-05-16 23:21:11] VERSION="7 (Core)"
[2025-05-16 23:21:11] ID="centos"
[2025-05-16 23:21:11] ID_LIKE="rhel fedora"
[2025-05-16 23:21:11] VERSION_ID="7"
[2025-05-16 23:21:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 23:21:11] ANSI_COLOR="0;31"
[2025-05-16 23:21:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 23:21:11] HOME_URL="https://www.centos.org/"
[2025-05-16 23:21:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 23:21:11] 
[2025-05-16 23:21:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 23:21:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 23:21:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 23:21:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 23:21:11] 
[2025-05-16 23:21:11] 2025-05-16 20:10:14,757 | INFO     | **************************************
[2025-05-16 23:21:11] 2025-05-16 20:10:15,260 | INFO     | executing command: df -mP /var/lib/boinc/slots/33
[2025-05-16 23:21:11] 2025-05-16 20:10:15,493 | INFO     | sufficient remaining disk space (496674799616 B)
[2025-05-16 23:21:11] 2025-05-16 20:10:15,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 23:21:11] 2025-05-16 20:10:15,494 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 23:21:11] 2025-05-16 20:10:15,494 | INFO     | update_server=False
[2025-05-16 23:21:11] 2025-05-16 20:10:15,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 23:21:11] 2025-05-16 20:10:16,201 | INFO     | all data control threads have been joined
[2025-05-16 23:21:11] 2025-05-16 20:10:16,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 23:21:11] 2025-05-16 20:10:16,461 | INFO     | aborting loop
[2025-05-16 23:21:11] 2025-05-16 20:10:16,500 | INFO     | [job] retrieve thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:16,580 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:16,625 | INFO     | PID=13545 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-16 23:21:11] 2025-05-16 20:10:16,625 | INFO     | .. there are 9 such processes running
[2025-05-16 23:21:11] 2025-05-16 20:10:16,625 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 23:21:11] 2025-05-16 20:10:16,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 23:21:11] 2025-05-16 20:10:16,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 23:21:11] 2025-05-16 20:10:16,721 | INFO     | all job control threads have been joined
[2025-05-16 23:21:11] 2025-05-16 20:10:16,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 23:21:11] 2025-05-16 20:10:16,917 | INFO     | all payload control threads have been joined
[2025-05-16 23:21:11] 2025-05-16 20:10:16,967 | INFO     | [job] validate thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:16,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 23:21:11] 2025-05-16 20:10:16,989 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:17,002 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:17,207 | INFO     | [data] control thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:17,235 | INFO     | [payload] failed_post thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:17,397 | INFO     | [payload] validate_post thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:17,467 | INFO     | [job] job monitor thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:17,579 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:17,727 | INFO     | [job] control thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:17,851 | INFO     | [data] copytool_in thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:17,923 | INFO     | [payload] control thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:17,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 23:21:11] 2025-05-16 20:10:17,984 | INFO     | [job] queue monitor thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:18,766 | INFO     | [data] copytool_out thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:21,985 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 23:21:11] 2025-05-16 20:10:22,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140602359076672)>', '<ExcThread(monitor, started 140601794230016)>']
[2025-05-16 23:21:11] 2025-05-16 20:10:23,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 23:21:11] 2025-05-16 20:10:23,667 | INFO     | [monitor] control thread has ended
[2025-05-16 23:21:11] 2025-05-16 20:10:27,880 | INFO     | all workflow threads have been joined
[2025-05-16 23:21:11] 2025-05-16 20:10:27,880 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 23:21:11] 2025-05-16 20:10:27,880 | INFO     | traces error code: 0
[2025-05-16 23:21:11] 2025-05-16 20:10:27,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 23:21:11] 2025-05-16 20:10:28,129 [wrapper] ==== pilot stdout END ====
[2025-05-16 23:21:11] 2025-05-16 20:10:28,196 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 23:21:11] 2025-05-16 20:10:28,262 [wrapper] pilotpid: 13545
[2025-05-16 23:21:11] 2025-05-16 20:10:28,306 [wrapper] Pilot exit status: 0
[2025-05-16 23:21:11] 2025-05-16 20:10:28,571 [wrapper] pandaids: 6650797653
[2025-05-16 23:21:11] 2025-05-16 20:10:29,148 [wrapper] cleanup supervisor_pilot 17367 13546
[2025-05-16 23:21:11] 2025-05-16 20:10:29,283 [wrapper] Test setup, not cleaning
[2025-05-16 23:21:11] 2025-05-16 20:10:29,385 [wrapper] apfmon messages muted
[2025-05-16 23:21:11] 2025-05-16 20:10:29,464 [wrapper] ==== wrapper stdout END ====
[2025-05-16 23:21:11] 2025-05-16 20:10:29,562 [wrapper] ==== wrapper stderr END ====
[2025-05-16 23:21:11]  *** Error codes and diagnostics ***
[2025-05-16 23:21:12]     "exeErrorCode": 0,
[2025-05-16 23:21:12]     "exeErrorDiag": "",
[2025-05-16 23:21:12]     "pilotErrorCode": 0,
[2025-05-16 23:21:12]     "pilotErrorDiag": "",
[2025-05-16 23:21:12]  *** Listing of results directory ***
[2025-05-16 23:21:12] total 416904
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc    495897 May 16 00:24 pilot3.tar.gz
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc      5111 May 16 01:05 queuedata.json
[2025-05-16 23:21:12] -rwx------. 1 boinc boinc     37140 May 16 01:07 runpilot2-wrapper.sh
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc       100 May 16 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 23:21:12] -rwxr-xr-x. 1 boinc boinc      7986 May 16 16:48 run_atlas
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc       105 May 16 16:48 job.xml
[2025-05-16 23:21:12] -rw-r--r--. 2 boinc boinc 222093969 May 16 16:48 EVNT.44638096._000387.pool.root.1
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc      6371 May 16 16:48 init_data.xml
[2025-05-16 23:21:12] -rw-r--r--. 2 boinc boinc     17569 May 16 16:48 start_atlas.sh
[2025-05-16 23:21:12] drwxrwx--x. 2 boinc boinc        68 May 16 16:48 shared
[2025-05-16 23:21:12] -rw-r--r--. 2 boinc boinc    508881 May 16 16:48 input.tar.gz
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc         0 May 16 16:48 boinc_lockfile
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc      2539 May 16 16:48 pandaJob.out
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc       424 May 16 16:48 setup.sh.local
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc    989428 May 16 16:49 agis_schedconf.cvmfs.json
[2025-05-16 23:21:12] drwx------. 4 boinc boinc      4096 May 16 16:49 pilot3
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc 196817354 May 16 22:07 HITS.44638099._030776.pool.root.1
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc       531 May 16 22:07 boinc_task_state.xml
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc      1019 May 16 22:08 memory_monitor_summary.json
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc   1596741 May 16 22:08 agis_ddmendpoints.agis.ALL.json
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc    426914 May 16 22:08 log.44638099._030776.job.log.tgz.1
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc        95 May 16 22:09 pilot_heartbeat.json
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc      7686 May 16 22:10 heartbeat.json
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc      4809 May 16 22:10 pilotlog.txt
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc   1657501 May 16 22:10 log.44638099._030776.job.log.1
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc       357 May 16 22:10 output.list
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc       620 May 16 22:10 runtime_log
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc   2099200 May 16 22:10 result.tar.gz
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc     11031 May 16 22:10 runtime_log.err
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc       657 May 16 22:10 6sQNDmdqwZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1TKKDmHQPtom.diag
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc      8192 May 16 23:21 boinc_mmap_file
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc        28 May 16 23:21 wrapper_checkpoint.txt
[2025-05-16 23:21:12] -rw-r--r--. 1 boinc boinc     20527 May 16 23:21 stderr.txt
[2025-05-16 23:21:12] HITS file was successfully produced:
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc 196817354 May 16 22:07 shared/HITS.pool.root.1
[2025-05-16 23:21:12]  *** Contents of shared directory: ***
[2025-05-16 23:21:12] total 411672
[2025-05-16 23:21:12] -rw-r--r--. 2 boinc boinc 222093969 May 16 16:48 ATLAS.root_0
[2025-05-16 23:21:12] -rw-r--r--. 2 boinc boinc     17569 May 16 16:48 start_atlas.sh
[2025-05-16 23:21:12] -rw-r--r--. 2 boinc boinc    508881 May 16 16:48 input.tar.gz
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc 196817354 May 16 22:07 HITS.pool.root.1
[2025-05-16 23:21:12] -rw-------. 1 boinc boinc   2099200 May 16 22:10 result.tar.gz
23:21:13 (9882): run_atlas exited; CPU time 70447.279849
23:21:13 (9882): called boinc_finish(0)

</stderr_txt>
]]>

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