Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:40:14 (4176630): wrapper (7.7.26015): starting
05:40:14 (4176630): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 05:40:14] Arguments: --nthreads 4
[2025-05-16 05:40:14] Threads: 4
[2025-05-16 05:40:14] Checking for CVMFS
[2025-05-16 05:40:14] No cvmfs_config command found, will try listing directly
[2025-05-16 05:40:14] CVMFS is ok
[2025-05-16 05:40:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 05:40:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 05:40:14] Further information can be found at the LHC@home message board.
[2025-05-16 05:40:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 05:40:14] Checking for apptainer binary...
[2025-05-16 05:40:14] which: no apptainer in ((null))
[2025-05-16 05:40:14] apptainer is not installed, using version from CVMFS
[2025-05-16 05:40:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 05:40:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-05-16 05:40:15] apptainer works
[2025-05-16 05:40:15] Set ATHENA_PROC_NUMBER=4
[2025-05-16 05:40:15] Set ATHENA_CORE_NUMBER=4
[2025-05-16 05:40:15] Starting ATLAS job with PandaID=6650760482
[2025-05-16 05:40:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 09:07:56]  *** The last 200 lines of the pilot log: ***
[2025-05-16 09:07:56] 2025-05-16 07:07:42,334 | INFO     | using path: /scratch/boinc/var/slot16/slots/0/PanDA_Pilot-6650760482/memory_monitor_summary.json (trf name=prmon)
[2025-05-16 09:07:56] 2025-05-16 07:07:42,335 | INFO     | extracted standard info from prmon json
[2025-05-16 09:07:56] 2025-05-16 07:07:42,335 | INFO     | extracted standard memory fields from prmon json
[2025-05-16 09:07:56] 2025-05-16 07:07:42,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-16 09:07:56] 2025-05-16 07:07:42,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-16 09:07:56] 2025-05-16 07:07:42,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-16 09:07:56] 2025-05-16 07:07:42,339 | INFO     | fitting pss+swap vs Time
[2025-05-16 09:07:56] 2025-05-16 07:07:42,340 | INFO     | sum of square deviations: 2632440055.0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,341 | INFO     | sum of deviations: 74319979397.99998
[2025-05-16 09:07:56] 2025-05-16 07:07:42,341 | INFO     | mean x: 1747373051.5
[2025-05-16 09:07:56] 2025-05-16 07:07:42,341 | INFO     | mean y: 2260209.8039215687
[2025-05-16 09:07:56] 2025-05-16 07:07:42,341 | INFO     | -- intersect: -49330194271.51963
[2025-05-16 09:07:56] 2025-05-16 07:07:42,341 | INFO     | intersect: -49330194271.51963
[2025-05-16 09:07:56] 2025-05-16 07:07:42,342 | INFO     | chi2: 5.043599907186867
[2025-05-16 09:07:56] 2025-05-16 07:07:42,342 | INFO     | sum of square deviations: 2443580700.0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,343 | INFO     | sum of deviations: 85188077155.0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,343 | INFO     | mean x: 1747372899.0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,343 | INFO     | mean y: 2268779.2613065327
[2025-05-16 09:07:56] 2025-05-16 07:07:42,343 | INFO     | -- intersect: -60914621478.780106
[2025-05-16 09:07:56] 2025-05-16 07:07:42,343 | INFO     | intersect: -60914621478.780106
[2025-05-16 09:07:56] 2025-05-16 07:07:42,344 | INFO     | chi2: 4.258746150802581
[2025-05-16 09:07:56] 2025-05-16 07:07:42,344 | INFO     | current chi2=4.258746150802581 (change=15.561380181364326 %)
[2025-05-16 09:07:56] 2025-05-16 07:07:42,344 | INFO     | right removable region: 198
[2025-05-16 09:07:56] 2025-05-16 07:07:42,344 | INFO     | sum of square deviations: 2443580700.0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,345 | INFO     | sum of deviations: 26674581237.0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,345 | INFO     | mean x: 1747373204.0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,346 | INFO     | mean y: 2298574.095477387
[2025-05-16 09:07:56] 2025-05-16 07:07:42,346 | INFO     | -- intersect: -19072352196.16759
[2025-05-16 09:07:56] 2025-05-16 07:07:42,346 | INFO     | intersect: -19072352196.16759
[2025-05-16 09:07:56] 2025-05-16 07:07:42,346 | INFO     | chi2: 2.4427794202270174
[2025-05-16 09:07:56] 2025-05-16 07:07:42,346 | INFO     | current chi2=2.4427794202270174 (change=51.566748648199 %)
[2025-05-16 09:07:56] 2025-05-16 07:07:42,346 | INFO     | sum of square deviations: 2263977332.5
[2025-05-16 09:07:56] 2025-05-16 07:07:42,347 | INFO     | sum of deviations: -11250294629.5
[2025-05-16 09:07:56] 2025-05-16 07:07:42,348 | INFO     | mean x: 1747373356.5
[2025-05-16 09:07:56] 2025-05-16 07:07:42,348 | INFO     | mean y: 2330779.6958762887
[2025-05-16 09:07:56] 2025-05-16 07:07:42,348 | INFO     | -- intersect: 8685485335.247656
[2025-05-16 09:07:56] 2025-05-16 07:07:42,348 | INFO     | intersect: 8685485335.247656
[2025-05-16 09:07:56] 2025-05-16 07:07:42,348 | INFO     | chi2: 0.9251668582727736
[2025-05-16 09:07:56] 2025-05-16 07:07:42,348 | INFO     | current chi2=0.9251668582727736 (change=62.12646747339986 %)
[2025-05-16 09:07:56] 2025-05-16 07:07:42,348 | INFO     | sum of square deviations: 2093397390.0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,350 | INFO     | sum of deviations: -18005738989.0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,350 | INFO     | mean x: 1747373509.0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,350 | INFO     | mean y: 2336741.714285714
[2025-05-16 09:07:56] 2025-05-16 07:07:42,350 | INFO     | -- intersect: 15031853578.623611
[2025-05-16 09:07:56] 2025-05-16 07:07:42,350 | INFO     | intersect: 15031853578.623611
[2025-05-16 09:07:56] 2025-05-16 07:07:42,350 | INFO     | chi2: 0.8292241547997442
[2025-05-16 09:07:56] 2025-05-16 07:07:42,350 | INFO     | current chi2=0.8292241547997442 (change=10.370313486169204 %)
[2025-05-16 09:07:56] 2025-05-16 07:07:42,350 | INFO     | left removable region: 30
[2025-05-16 09:07:56] 2025-05-16 07:07:42,350 | INFO     | sum of square deviations: 1470248962.0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,351 | INFO     | sum of deviations: -5467519151.500001
[2025-05-16 09:07:56] 2025-05-16 07:07:42,352 | INFO     | mean x: 1747373783.5
[2025-05-16 09:07:56] 2025-05-16 07:07:42,352 | INFO     | mean y: 2347849.398809524
[2025-05-16 09:07:56] 2025-05-16 07:07:42,352 | INFO     | -- intersect: 6500430740.829047
[2025-05-16 09:07:56] 2025-05-16 07:07:42,352 | INFO     | intersect: 6500430740.829047
[2025-05-16 09:07:56] 2025-05-16 07:07:42,352 | INFO     | chi2: 0.0016041283856232408
[2025-05-16 09:07:56] 2025-05-16 07:07:42,352 | INFO     | -- intersect: 6500430740.829047
[2025-05-16 09:07:56] 2025-05-16 07:07:42,352 | INFO     | current memory leak: -3.72 B/s (using 168 data points, chi2=0.00)
[2025-05-16 09:07:56] 2025-05-16 07:07:42,353 | INFO     | ..............................
[2025-05-16 09:07:56] 2025-05-16 07:07:42,353 | INFO     | . Timing measurements:
[2025-05-16 09:07:56] 2025-05-16 07:07:42,353 | INFO     | . get job = 0 s
[2025-05-16 09:07:56] 2025-05-16 07:07:42,353 | INFO     | . initial setup = 1 s
[2025-05-16 09:07:56] 2025-05-16 07:07:42,353 | INFO     | . payload setup = 8 s
[2025-05-16 09:07:56] 2025-05-16 07:07:42,353 | INFO     | . stage-in = 0 s
[2025-05-16 09:07:56] 2025-05-16 07:07:42,353 | INFO     | . payload execution = 12393 s
[2025-05-16 09:07:56] 2025-05-16 07:07:42,353 | INFO     | . stage-out = 1 s
[2025-05-16 09:07:56] 2025-05-16 07:07:42,353 | INFO     | . log creation = 0 s
[2025-05-16 09:07:56] 2025-05-16 07:07:42,353 | INFO     | ..............................
[2025-05-16 09:07:56] 2025-05-16 07:07:42,446 | INFO     | 
[2025-05-16 09:07:56] 2025-05-16 07:07:42,447 | INFO     | job summary report
[2025-05-16 09:07:56] 2025-05-16 07:07:42,447 | INFO     | --------------------------------------------------
[2025-05-16 09:07:56] 2025-05-16 07:07:42,447 | INFO     | PanDA job id: 6650760482
[2025-05-16 09:07:56] 2025-05-16 07:07:42,447 | INFO     | task id: 44638099
[2025-05-16 09:07:56] 2025-05-16 07:07:42,447 | INFO     | errors: (none)
[2025-05-16 09:07:56] 2025-05-16 07:07:42,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 09:07:56] 2025-05-16 07:07:42,447 | INFO     | pilot state: finished 
[2025-05-16 09:07:56] 2025-05-16 07:07:42,447 | INFO     | transexitcode: 0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,447 | INFO     | exeerrorcode: 0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,447 | INFO     | exeerrordiag: 
[2025-05-16 09:07:56] 2025-05-16 07:07:42,447 | INFO     | exitcode: 0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | exitmsg: OK
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | cpuconsumptiontime: 45661 s
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | nevents: 400
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | neventsw: 0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | pid: 4190109
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | pgrp: 4190109
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | corecount: 4
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | event service: False
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | sizes: {0: 2393671, 7: 2393877, 11: 2393905, 12405: 2423869, 12406: 2432832, 12409: 2432888, 12417: 2433186}
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | --------------------------------------------------
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | 
[2025-05-16 09:07:56] 2025-05-16 07:07:42,448 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/0
[2025-05-16 09:07:56] 2025-05-16 07:07:42,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,479 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,480 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 09:07:56] 2025-05-16 07:07:42,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 09:07:56] 2025-05-16 07:07:42,480 | INFO     | job 6650760482 has completed (purged errors)
[2025-05-16 09:07:56] 2025-05-16 07:07:42,480 | INFO     | overall cleanup function is called
[2025-05-16 09:07:56] 2025-05-16 07:07:43,490 | INFO     | --- collectZombieJob: --- 10, [4190109]
[2025-05-16 09:07:56] 2025-05-16 07:07:43,490 | INFO     | zombie collector waiting for pid 4190109
[2025-05-16 09:07:56] 2025-05-16 07:07:43,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 09:07:56] 2025-05-16 07:07:43,491 | INFO     | collected zombie processes
[2025-05-16 09:07:56] 2025-05-16 07:07:43,491 | INFO     | will attempt to kill all subprocesses of pid=4190109
[2025-05-16 09:07:56] 2025-05-16 07:07:44,206 | INFO     | process IDs to be killed: [4190109] (in reverse order)
[2025-05-16 09:07:56] 2025-05-16 07:07:44,452 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 09:07:56] 2025-05-16 07:07:44,452 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 09:07:56] 2025-05-16 07:07:44,475 | INFO     | did not find any defunct processes belonging to 4190109
[2025-05-16 09:07:56] 2025-05-16 07:07:44,495 | INFO     | did not find any defunct processes belonging to 4190109
[2025-05-16 09:07:56] 2025-05-16 07:07:44,495 | INFO     | ready for new job
[2025-05-16 09:07:56] 2025-05-16 07:07:44,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 09:07:56] 2025-05-16 07:07:44,497 | INFO     | **************************************
[2025-05-16 09:07:56] 2025-05-16 07:07:44,498 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 09:07:56] 2025-05-16 07:07:44,498 | INFO     | **************************************
[2025-05-16 09:07:56] 2025-05-16 07:07:44,498 | INFO     | 
[2025-05-16 09:07:56] 2025-05-16 07:07:44,506 | INFO     | architecture information:
[2025-05-16 09:07:56] 2025-05-16 07:07:44,506 | INFO     | executing command: cat /etc/os-release
[2025-05-16 09:07:56] 2025-05-16 07:07:44,529 | INFO     | cat /etc/os-release:
[2025-05-16 09:07:56] NAME="CentOS Linux"
[2025-05-16 09:07:56] VERSION="7 (Core)"
[2025-05-16 09:07:56] ID="centos"
[2025-05-16 09:07:56] ID_LIKE="rhel fedora"
[2025-05-16 09:07:56] VERSION_ID="7"
[2025-05-16 09:07:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 09:07:56] ANSI_COLOR="0;31"
[2025-05-16 09:07:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 09:07:56] HOME_URL="https://www.centos.org/"
[2025-05-16 09:07:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 09:07:56] 
[2025-05-16 09:07:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 09:07:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 09:07:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 09:07:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 09:07:56] 
[2025-05-16 09:07:56] 2025-05-16 07:07:44,529 | INFO     | **************************************
[2025-05-16 09:07:56] 2025-05-16 07:07:45,031 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/0
[2025-05-16 09:07:56] 2025-05-16 07:07:45,056 | INFO     | sufficient remaining disk space (3333221777408 B)
[2025-05-16 09:07:56] 2025-05-16 07:07:45,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 09:07:56] 2025-05-16 07:07:45,056 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 09:07:56] 2025-05-16 07:07:45,056 | INFO     | update_server=False
[2025-05-16 09:07:56] 2025-05-16 07:07:45,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 09:07:56] 2025-05-16 07:07:45,057 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-16 09:07:56] 2025-05-16 07:07:45,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 09:07:56] 2025-05-16 07:07:45,058 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 09:07:56] 2025-05-16 07:07:45,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 09:07:56] 2025-05-16 07:07:45,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 09:07:56] 2025-05-16 07:07:45,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 09:07:56] 2025-05-16 07:07:45,166 | INFO     | aborting loop
[2025-05-16 09:07:56] 2025-05-16 07:07:45,329 | INFO     | all data control threads have been joined
[2025-05-16 09:07:56] 2025-05-16 07:07:45,391 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 09:07:56] 2025-05-16 07:07:45,933 | INFO     | all job control threads have been joined
[2025-05-16 09:07:56] 2025-05-16 07:07:45,944 | INFO     | all payload control threads have been joined
[2025-05-16 09:07:56] 2025-05-16 07:07:46,062 | INFO     | [job] retrieve thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:46,088 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:46,162 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:46,171 | INFO     | [job] job monitor thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:46,220 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:46,334 | INFO     | [data] control thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:46,542 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:46,737 | INFO     | [data] copytool_in thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:46,744 | INFO     | [payload] failed_post thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:46,938 | INFO     | [job] control thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:46,949 | INFO     | [payload] control thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:47,064 | INFO     | [data] copytool_out thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:47,444 | INFO     | [job] validate thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:47,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 09:07:56] 2025-05-16 07:07:47,647 | INFO     | [payload] validate_post thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:48,463 | INFO     | [job] queue monitor thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:49,397 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 09:07:56] 2025-05-16 07:07:51,466 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22943944062784)>', '<ExcThread(monitor, started 22943637677824)>']
[2025-05-16 09:07:56] 2025-05-16 07:07:52,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 09:07:56] 2025-05-16 07:07:52,090 | INFO     | [monitor] control thread has ended
[2025-05-16 09:07:56] 2025-05-16 07:07:56,467 | INFO     | all workflow threads have been joined
[2025-05-16 09:07:56] 2025-05-16 07:07:56,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 09:07:56] 2025-05-16 07:07:56,467 | INFO     | traces error code: 0
[2025-05-16 09:07:56] 2025-05-16 07:07:56,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 09:07:56] 2025-05-16 07:07:56,633 [wrapper] ==== pilot stdout END ====
[2025-05-16 09:07:56] 2025-05-16 07:07:56,637 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 09:07:56] 2025-05-16 07:07:56,641 [wrapper] pilotpid: 4182826
[2025-05-16 09:07:56] 2025-05-16 07:07:56,644 [wrapper] Pilot exit status: 0
[2025-05-16 09:07:56] 2025-05-16 07:07:56,659 [wrapper] pandaids: 6650760482
[2025-05-16 09:07:56] 2025-05-16 07:07:56,804 [wrapper] cleanup supervisor_pilot  848532 4182827
[2025-05-16 09:07:56] 2025-05-16 07:07:56,808 [wrapper] Test setup, not cleaning
[2025-05-16 09:07:56] 2025-05-16 07:07:56,812 [wrapper] apfmon messages muted
[2025-05-16 09:07:56] 2025-05-16 07:07:56,816 [wrapper] ==== wrapper stdout END ====
[2025-05-16 09:07:56] 2025-05-16 07:07:56,820 [wrapper] ==== wrapper stderr END ====
[2025-05-16 09:07:56]  *** Error codes and diagnostics ***
[2025-05-16 09:07:56]     "exeErrorCode": 0,
[2025-05-16 09:07:56]     "exeErrorDiag": "",
[2025-05-16 09:07:56]     "pilotErrorCode": 0,
[2025-05-16 09:07:56]     "pilotErrorDiag": "",
[2025-05-16 09:07:56]  *** Listing of results directory ***
[2025-05-16 09:07:56] total 420660
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc    495897 May 15 23:22 pilot3.tar.gz
[2025-05-16 09:07:56] -rwx------ 1 boinc boinc     37140 May 15 23:29 runpilot2-wrapper.sh
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc      5111 May 15 23:29 queuedata.json
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc       100 May 16 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 09:07:56] -rwxr-xr-x 1 boinc boinc      7986 May 16 05:40 run_atlas
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc       105 May 16 05:40 job.xml
[2025-05-16 09:07:56] -rw-r--r-- 2 boinc boinc 223767022 May 16 05:40 EVNT.44638096._000347.pool.root.1
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc      6673 May 16 05:40 init_data.xml
[2025-05-16 09:07:56] -rw-r--r-- 2 boinc boinc    508879 May 16 05:40 input.tar.gz
[2025-05-16 09:07:56] -rw-r--r-- 2 boinc boinc     17569 May 16 05:40 start_atlas.sh
[2025-05-16 09:07:56] drwxrwx--x 2 boinc boinc      4096 May 16 05:40 shared
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc         0 May 16 05:40 boinc_lockfile
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc      2538 May 16 05:40 pandaJob.out
[2025-05-16 09:07:56] -rw------- 1 boinc boinc       424 May 16 05:40 setup.sh.local
[2025-05-16 09:07:56] -rw------- 1 boinc boinc    995903 May 16 05:40 agis_schedconf.cvmfs.json
[2025-05-16 09:07:56] drwx------ 4 boinc boinc      4096 May 16 05:40 pilot3
[2025-05-16 09:07:56] -rw------- 1 boinc boinc 200162467 May 16 09:06 HITS.44638099._029801.pool.root.1
[2025-05-16 09:07:56] -rw------- 1 boinc boinc        95 May 16 09:06 pilot_heartbeat.json
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc       531 May 16 09:06 boinc_task_state.xml
[2025-05-16 09:07:56] -rw------- 1 boinc boinc      1024 May 16 09:07 memory_monitor_summary.json
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc      8192 May 16 09:07 boinc_mmap_file
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc        28 May 16 09:07 wrapper_checkpoint.txt
[2025-05-16 09:07:56] -rw------- 1 boinc boinc   1596741 May 16 09:07 agis_ddmendpoints.agis.ALL.json
[2025-05-16 09:07:56] -rw------- 1 boinc boinc    334562 May 16 09:07 log.44638099._029801.job.log.tgz.1
[2025-05-16 09:07:56] -rw------- 1 boinc boinc      7696 May 16 09:07 heartbeat.json
[2025-05-16 09:07:56] -rw------- 1 boinc boinc      4487 May 16 09:07 pilotlog.txt
[2025-05-16 09:07:56] -rw------- 1 boinc boinc   1156474 May 16 09:07 log.44638099._029801.job.log.1
[2025-05-16 09:07:56] -rw------- 1 boinc boinc       357 May 16 09:07 output.list
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc       620 May 16 09:07 runtime_log
[2025-05-16 09:07:56] -rw------- 1 boinc boinc   1505280 May 16 09:07 result.tar.gz
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc     11424 May 16 09:07 runtime_log.err
[2025-05-16 09:07:56] -rw------- 1 boinc boinc       665 May 16 09:07 RXSMDmEKvZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmIKKDmkGiy7m.diag
[2025-05-16 09:07:56] -rw-r--r-- 1 boinc boinc     20634 May 16 09:07 stderr.txt
[2025-05-16 09:07:56] HITS file was successfully produced:
[2025-05-16 09:07:56] -rw------- 1 boinc boinc 200162467 May 16 09:06 shared/HITS.pool.root.1
[2025-05-16 09:07:56]  *** Contents of shared directory: ***
[2025-05-16 09:07:56] total 415996
[2025-05-16 09:07:56] -rw-r--r-- 2 boinc boinc 223767022 May 16 05:40 ATLAS.root_0
[2025-05-16 09:07:56] -rw-r--r-- 2 boinc boinc    508879 May 16 05:40 input.tar.gz
[2025-05-16 09:07:56] -rw-r--r-- 2 boinc boinc     17569 May 16 05:40 start_atlas.sh
[2025-05-16 09:07:56] -rw------- 1 boinc boinc 200162467 May 16 09:06 HITS.pool.root.1
[2025-05-16 09:07:56] -rw------- 1 boinc boinc   1505280 May 16 09:07 result.tar.gz
09:07:58 (4176630): run_atlas exited; CPU time 46313.609755
09:07:58 (4176630): called boinc_finish(0)

</stderr_txt>
]]>

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