Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:36:26 (2947): wrapper (7.7.26015): starting
17:36:26 (2947): wrapper: running run_atlas (--nthreads 8)
[2025-05-16 17:36:26] Arguments: --nthreads 8
[2025-05-16 17:36:26] Threads: 8
[2025-05-16 17:36:26] Checking for CVMFS
[2025-05-16 17:36:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 17:36:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 17:36:26] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 17:36:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 17:36:27] 2.11.2.0 31738 6033 86920 146070 3 153 16592087 25165825 4162 130560 0 2314721 99.688 5658030 935 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-16 17:36:27] CVMFS is ok
[2025-05-16 17:36:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 17:36:27] Checking for apptainer binary...
[2025-05-16 17:36:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 17:36:27] Running /usr/bin/apptainer --version
[2025-05-16 17:36:27] apptainer version 1.3.2-1.el7
[2025-05-16 17:36:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 17:36:28] cg-vwn375.simple-grid.lan
[2025-05-16 17:36:28] apptainer works
[2025-05-16 17:36:28] Set ATHENA_PROC_NUMBER=8
[2025-05-16 17:36:28] Set ATHENA_CORE_NUMBER=8
[2025-05-16 17:36:28] Starting ATLAS job with PandaID=6650758289
[2025-05-16 17:36:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 03:38:28]  *** The last 200 lines of the pilot log: ***
[2025-05-17 03:38:28] 2025-05-16 20:39:21,648 | INFO     | chi2: 5.278316667512592
[2025-05-17 03:38:28] 2025-05-16 20:39:21,649 | INFO     | sum of square deviations: 7562532492.5
[2025-05-17 03:38:28] 2025-05-16 20:39:21,652 | INFO     | sum of deviations: 120624068414.50009
[2025-05-17 03:38:28] 2025-05-16 20:39:21,652 | INFO     | mean x: 1747418726.5
[2025-05-17 03:38:28] 2025-05-16 20:39:21,652 | INFO     | mean y: 2457589.7620689655
[2025-05-17 03:38:28] 2025-05-16 20:39:21,652 | INFO     | -- intersect: -27869258164.603615
[2025-05-17 03:38:28] 2025-05-16 20:39:21,652 | INFO     | intersect: -27869258164.603615
[2025-05-17 03:38:28] 2025-05-16 20:39:21,653 | INFO     | chi2: 4.532334960954972
[2025-05-17 03:38:28] 2025-05-16 20:39:21,653 | INFO     | current chi2=4.532334960954972 (change=14.132947178956659 %)
[2025-05-17 03:38:28] 2025-05-16 20:39:21,653 | INFO     | right removable region: 289
[2025-05-17 03:38:28] 2025-05-16 20:39:21,654 | INFO     | sum of square deviations: 7562532492.5
[2025-05-17 03:38:28] 2025-05-16 20:39:21,666 | INFO     | sum of deviations: 27763942569.500004
[2025-05-17 03:38:28] 2025-05-16 20:39:21,666 | INFO     | mean x: 1747419031.5
[2025-05-17 03:38:28] 2025-05-16 20:39:21,666 | INFO     | mean y: 2479755.920689655
[2025-05-17 03:38:28] 2025-05-16 20:39:21,666 | INFO     | -- intersect: -6412731244.300652
[2025-05-17 03:38:28] 2025-05-16 20:39:21,666 | INFO     | intersect: -6412731244.300652
[2025-05-17 03:38:28] 2025-05-16 20:39:21,667 | INFO     | chi2: 2.6033479808053013
[2025-05-17 03:38:28] 2025-05-16 20:39:21,667 | INFO     | current chi2=2.6033479808053013 (change=50.678442677973514 %)
[2025-05-17 03:38:28] 2025-05-16 20:39:21,668 | INFO     | sum of square deviations: 7178069470.0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,671 | INFO     | sum of deviations: -26070815497.999992
[2025-05-17 03:38:28] 2025-05-16 20:39:21,671 | INFO     | mean x: 1747419184.0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,671 | INFO     | mean y: 2501110.3789473684
[2025-05-17 03:38:28] 2025-05-16 20:39:21,671 | INFO     | -- intersect: 6349143941.592686
[2025-05-17 03:38:28] 2025-05-16 20:39:21,671 | INFO     | intersect: 6349143941.592686
[2025-05-17 03:38:28] 2025-05-16 20:39:21,672 | INFO     | chi2: 1.3373929521734227
[2025-05-17 03:38:28] 2025-05-16 20:39:21,672 | INFO     | current chi2=1.3373929521734227 (change=48.62796053258609 %)
[2025-05-17 03:38:28] 2025-05-16 20:39:21,672 | INFO     | sum of square deviations: 6806862510.0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,675 | INFO     | sum of deviations: -49709389952.0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,675 | INFO     | mean x: 1747419336.5
[2025-05-17 03:38:28] 2025-05-16 20:39:21,675 | INFO     | mean y: 2510755.1714285715
[2025-05-17 03:38:28] 2025-05-16 20:39:21,676 | INFO     | -- intersect: 12763624863.195862
[2025-05-17 03:38:28] 2025-05-16 20:39:21,676 | INFO     | intersect: 12763624863.195862
[2025-05-17 03:38:28] 2025-05-16 20:39:21,676 | INFO     | chi2: 0.9523113324812436
[2025-05-17 03:38:28] 2025-05-16 20:39:21,676 | INFO     | current chi2=0.9523113324812436 (change=28.79345364175695 %)
[2025-05-17 03:38:28] 2025-05-16 20:39:21,677 | INFO     | sum of square deviations: 6448679050.0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,679 | INFO     | sum of deviations: -43904950080.0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,680 | INFO     | mean x: 1747419489.0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,680 | INFO     | mean y: 2508267.1672727275
[2025-05-17 03:38:28] 2025-05-16 20:39:21,680 | INFO     | -- intersect: 11899575067.74934
[2025-05-17 03:38:28] 2025-05-16 20:39:21,680 | INFO     | intersect: 11899575067.74934
[2025-05-17 03:38:28] 2025-05-16 20:39:21,680 | INFO     | chi2: 0.9358656925226836
[2025-05-17 03:38:28] 2025-05-16 20:39:21,681 | INFO     | current chi2=0.9358656925226836 (change=1.726918434931454 %)
[2025-05-17 03:38:28] 2025-05-16 20:39:21,681 | INFO     | left removable region: 40
[2025-05-17 03:38:28] 2025-05-16 20:39:21,681 | INFO     | sum of square deviations: 4787066500.0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,688 | INFO     | sum of deviations: 7831330304.0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,688 | INFO     | mean x: 1747419916.0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,688 | INFO     | mean y: 2500543.2168674697
[2025-05-17 03:38:28] 2025-05-16 20:39:21,688 | INFO     | -- intersect: -2856165101.3869696
[2025-05-17 03:38:28] 2025-05-16 20:39:21,688 | INFO     | intersect: -2856165101.3869696
[2025-05-17 03:38:28] 2025-05-16 20:39:21,689 | INFO     | chi2: 0.0002704773676507754
[2025-05-17 03:38:28] 2025-05-16 20:39:21,689 | INFO     | -- intersect: -2856165101.3869696
[2025-05-17 03:38:28] 2025-05-16 20:39:21,689 | INFO     | current memory leak: 1.64 B/s (using 249 data points, chi2=0.00)
[2025-05-17 03:38:28] 2025-05-16 20:39:21,690 | INFO     | ..............................
[2025-05-17 03:38:28] 2025-05-16 20:39:21,690 | INFO     | . Timing measurements:
[2025-05-17 03:38:28] 2025-05-16 20:39:21,690 | INFO     | . get job = 0 s
[2025-05-17 03:38:28] 2025-05-16 20:39:21,690 | INFO     | . initial setup = 2 s
[2025-05-17 03:38:28] 2025-05-16 20:39:21,691 | INFO     | . payload setup = 17 s
[2025-05-17 03:38:28] 2025-05-16 20:39:21,691 | INFO     | . stage-in = 0 s
[2025-05-17 03:38:28] 2025-05-16 20:39:21,691 | INFO     | . payload execution = 17989 s
[2025-05-17 03:38:28] 2025-05-16 20:39:21,691 | INFO     | . stage-out = 4 s
[2025-05-17 03:38:28] 2025-05-16 20:39:21,691 | INFO     | . log creation = 1 s
[2025-05-17 03:38:28] 2025-05-16 20:39:21,691 | INFO     | ..............................
[2025-05-17 03:38:28] 2025-05-16 20:39:21,869 | INFO     | 
[2025-05-17 03:38:28] 2025-05-16 20:39:21,869 | INFO     | job summary report
[2025-05-17 03:38:28] 2025-05-16 20:39:21,869 | INFO     | --------------------------------------------------
[2025-05-17 03:38:28] 2025-05-16 20:39:21,869 | INFO     | PanDA job id: 6650758289
[2025-05-17 03:38:28] 2025-05-16 20:39:21,869 | INFO     | task id: 44638099
[2025-05-17 03:38:28] 2025-05-16 20:39:21,869 | INFO     | errors: (none)
[2025-05-17 03:38:28] 2025-05-16 20:39:21,870 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 03:38:28] 2025-05-16 20:39:21,870 | INFO     | pilot state: finished 
[2025-05-17 03:38:28] 2025-05-16 20:39:21,870 | INFO     | transexitcode: 0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,870 | INFO     | exeerrorcode: 0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,870 | INFO     | exeerrordiag: 
[2025-05-17 03:38:28] 2025-05-16 20:39:21,870 | INFO     | exitcode: 0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,870 | INFO     | exitmsg: OK
[2025-05-17 03:38:28] 2025-05-16 20:39:21,870 | INFO     | cpuconsumptiontime: 68404 s
[2025-05-17 03:38:28] 2025-05-16 20:39:21,870 | INFO     | nevents: 400
[2025-05-17 03:38:28] 2025-05-16 20:39:21,871 | INFO     | neventsw: 0
[2025-05-17 03:38:28] 2025-05-16 20:39:21,871 | INFO     | pid: 18648
[2025-05-17 03:38:28] 2025-05-16 20:39:21,871 | INFO     | pgrp: 18648
[2025-05-17 03:38:28] 2025-05-16 20:39:21,871 | INFO     | corecount: 8
[2025-05-17 03:38:28] 2025-05-16 20:39:21,871 | INFO     | event service: False
[2025-05-17 03:38:28] 2025-05-16 20:39:21,871 | INFO     | sizes: {0: 2393711, 1: 2393711, 12: 2393739, 13: 2393973, 22: 2394029, 18011: 2425662, 18016: 2434603, 18018: 2434659, 18117: 2434829}
[2025-05-17 03:38:28] 2025-05-16 20:39:21,871 | INFO     | --------------------------------------------------
[2025-05-17 03:38:28] 2025-05-16 20:39:21,871 | INFO     | 
[2025-05-17 03:38:28] 2025-05-16 20:39:21,872 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-05-17 03:38:28] 2025-05-16 20:39:22,305 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,305 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,306 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,306 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,306 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,306 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,307 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,307 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 03:38:28] 2025-05-16 20:39:22,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,307 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 03:38:28] 2025-05-16 20:39:22,308 | INFO     | job 6650758289 has completed (purged errors)
[2025-05-17 03:38:28] 2025-05-16 20:39:22,308 | INFO     | overall cleanup function is called
[2025-05-17 03:38:28] 2025-05-16 20:39:23,317 | INFO     | --- collectZombieJob: --- 10, [18648]
[2025-05-17 03:38:28] 2025-05-16 20:39:23,317 | INFO     | zombie collector waiting for pid 18648
[2025-05-17 03:38:28] 2025-05-16 20:39:23,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 03:38:28] 2025-05-16 20:39:23,317 | INFO     | collected zombie processes
[2025-05-17 03:38:28] 2025-05-16 20:39:23,317 | INFO     | will attempt to kill all subprocesses of pid=18648
[2025-05-17 03:38:28] 2025-05-16 20:39:23,421 | INFO     | process IDs to be killed: [18648] (in reverse order)
[2025-05-17 03:38:28] 2025-05-16 20:39:24,206 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 03:38:28] 2025-05-16 20:39:24,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 03:38:28] 2025-05-16 20:39:24,210 | INFO     | did not find any defunct processes belonging to 18648
[2025-05-17 03:38:28] 2025-05-16 20:39:24,213 | INFO     | did not find any defunct processes belonging to 18648
[2025-05-17 03:38:28] 2025-05-16 20:39:24,213 | INFO     | ready for new job
[2025-05-17 03:38:28] 2025-05-16 20:39:24,213 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 03:38:28] 2025-05-16 20:39:24,215 | INFO     | **************************************
[2025-05-17 03:38:28] 2025-05-16 20:39:24,215 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 03:38:28] 2025-05-16 20:39:24,215 | INFO     | **************************************
[2025-05-17 03:38:28] 2025-05-16 20:39:24,215 | INFO     | 
[2025-05-17 03:38:28] 2025-05-16 20:39:24,216 | INFO     | pilot is running in a VM
[2025-05-17 03:38:28] 2025-05-16 20:39:24,216 | INFO     | architecture information:
[2025-05-17 03:38:28] 2025-05-16 20:39:24,229 | INFO     | executing command: cat /etc/os-release
[2025-05-17 03:38:28] 2025-05-16 20:39:24,428 | INFO     | cat /etc/os-release:
[2025-05-17 03:38:28] NAME="CentOS Linux"
[2025-05-17 03:38:28] VERSION="7 (Core)"
[2025-05-17 03:38:28] ID="centos"
[2025-05-17 03:38:28] ID_LIKE="rhel fedora"
[2025-05-17 03:38:28] VERSION_ID="7"
[2025-05-17 03:38:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 03:38:28] ANSI_COLOR="0;31"
[2025-05-17 03:38:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 03:38:28] HOME_URL="https://www.centos.org/"
[2025-05-17 03:38:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 03:38:28] 
[2025-05-17 03:38:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 03:38:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 03:38:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 03:38:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 03:38:28] 
[2025-05-17 03:38:28] 2025-05-16 20:39:24,429 | INFO     | **************************************
[2025-05-17 03:38:28] 2025-05-16 20:39:24,932 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-05-17 03:38:28] 2025-05-16 20:39:25,178 | INFO     | sufficient remaining disk space (497195941888 B)
[2025-05-17 03:38:28] 2025-05-16 20:39:25,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 03:38:28] 2025-05-16 20:39:25,179 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 03:38:28] 2025-05-16 20:39:25,179 | INFO     | update_server=False
[2025-05-17 03:38:28] 2025-05-16 20:39:25,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 03:38:28] 2025-05-16 20:39:25,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 03:38:28] 2025-05-16 20:39:25,187 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 03:38:28] 2025-05-16 20:39:25,310 | INFO     | all data control threads have been joined
[2025-05-17 03:38:28] 2025-05-16 20:39:25,541 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-17 03:38:28] 2025-05-16 20:39:25,541 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-17 03:38:28] 2025-05-16 20:39:25,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 03:38:28] 2025-05-16 20:39:25,541 | INFO     | will abort loop
[2025-05-17 03:38:28] 2025-05-16 20:39:25,871 | INFO     | PID=7031 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-17 03:38:28] 2025-05-16 20:39:25,871 | INFO     | .. there are 9 such processes running
[2025-05-17 03:38:28] 2025-05-16 20:39:25,871 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 03:38:28] 2025-05-16 20:39:25,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 03:38:28] 2025-05-16 20:39:25,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 03:38:28] 2025-05-16 20:39:26,185 | INFO     | [job] retrieve thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:26,299 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:26,316 | INFO     | [data] control thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:26,411 | INFO     | all payload control threads have been joined
[2025-05-17 03:38:28] 2025-05-16 20:39:26,454 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:26,501 | INFO     | all job control threads have been joined
[2025-05-17 03:38:28] 2025-05-16 20:39:26,547 | INFO     | [job] job monitor thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:26,867 | INFO     | [payload] failed_post thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:26,881 | INFO     | [payload] validate_post thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:26,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 03:38:28] 2025-05-16 20:39:27,187 | INFO     | [data] copytool_out thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:27,287 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:27,341 | INFO     | [job] validate thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:27,396 | INFO     | [data] copytool_in thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:27,417 | INFO     | [payload] control thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:27,507 | INFO     | [job] control thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:27,889 | INFO     | [job] queue monitor thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:29,197 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:35,366 | INFO     | job.realtimelogging is not enabled
[2025-05-17 03:38:28] 2025-05-16 20:39:36,372 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 03:38:28] 2025-05-16 20:39:36,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140608396171072)>', '<ExcThread(monitor, started 140607825635072)>']
[2025-05-17 03:38:28] 2025-05-16 20:39:36,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 03:38:28] 2025-05-16 20:39:36,937 | INFO     | [monitor] control thread has ended
[2025-05-17 03:38:28] 2025-05-16 20:39:41,420 | INFO     | all workflow threads have been joined
[2025-05-17 03:38:28] 2025-05-16 20:39:41,420 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 03:38:28] 2025-05-16 20:39:41,420 | INFO     | traces error code: 0
[2025-05-17 03:38:28] 2025-05-16 20:39:41,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 03:38:28] 2025-05-16 20:39:41,881 [wrapper] ==== pilot stdout END ====
[2025-05-17 03:38:28] 2025-05-16 20:39:41,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 03:38:28] 2025-05-16 20:39:42,085 [wrapper] pilotpid: 7031
[2025-05-17 03:38:28] 2025-05-16 20:39:42,192 [wrapper] Pilot exit status: 0
[2025-05-17 03:38:28] 2025-05-16 20:39:42,567 [wrapper] pandaids: 6650758289
[2025-05-17 03:38:28] 2025-05-16 20:39:43,277 [wrapper] cleanup supervisor_pilot  2757 7033
[2025-05-17 03:38:28] 2025-05-16 20:39:43,312 [wrapper] Test setup, not cleaning
[2025-05-17 03:38:28] 2025-05-16 20:39:43,390 [wrapper] apfmon messages muted
[2025-05-17 03:38:28] 2025-05-16 20:39:43,464 [wrapper] ==== wrapper stdout END ====
[2025-05-17 03:38:28] 2025-05-16 20:39:43,578 [wrapper] ==== wrapper stderr END ====
[2025-05-17 03:38:28]  *** Error codes and diagnostics ***
[2025-05-17 03:38:28]     "exeErrorCode": 0,
[2025-05-17 03:38:28]     "exeErrorDiag": "",
[2025-05-17 03:38:28]     "pilotErrorCode": 0,
[2025-05-17 03:38:28]     "pilotErrorDiag": "",
[2025-05-17 03:38:28]  *** Listing of results directory ***
[2025-05-17 03:38:28] total 412996
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc      5111 May 15 23:14 queuedata.json
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc    495897 May 15 23:14 pilot3.tar.gz
[2025-05-17 03:38:28] -rwx------. 1 boinc boinc     37140 May 15 23:15 runpilot2-wrapper.sh
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc       100 May 16 17:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 03:38:28] -rwxr-xr-x. 1 boinc boinc      7986 May 16 17:36 run_atlas
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc       105 May 16 17:36 job.xml
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc      6371 May 16 17:36 init_data.xml
[2025-05-17 03:38:28] -rw-r--r--. 2 boinc boinc 219680878 May 16 17:36 EVNT.44638096._000340.pool.root.1
[2025-05-17 03:38:28] -rw-r--r--. 2 boinc boinc     17569 May 16 17:36 start_atlas.sh
[2025-05-17 03:38:28] drwxrwx--x. 2 boinc boinc        68 May 16 17:36 shared
[2025-05-17 03:38:28] -rw-r--r--. 2 boinc boinc    508880 May 16 17:36 input.tar.gz
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc         0 May 16 17:36 boinc_lockfile
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc      2539 May 16 17:36 pandaJob.out
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc       424 May 16 17:36 setup.sh.local
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc    990168 May 16 17:36 agis_schedconf.cvmfs.json
[2025-05-17 03:38:28] drwx------. 4 boinc boinc      4096 May 16 17:36 pilot3
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc 195389198 May 16 22:36 HITS.44638099._029627.pool.root.1
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc       531 May 16 22:36 boinc_task_state.xml
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc      1021 May 16 22:37 memory_monitor_summary.json
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc   1596741 May 16 22:37 agis_ddmendpoints.agis.ALL.json
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc    437665 May 16 22:37 log.44638099._029627.job.log.tgz.1
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc        95 May 16 22:38 pilot_heartbeat.json
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc      7692 May 16 22:39 heartbeat.json
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc      5065 May 16 22:39 pilotlog.txt
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc   1565835 May 16 22:39 log.44638099._029627.job.log.1
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc       357 May 16 22:39 output.list
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc       620 May 16 22:39 runtime_log
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc   2027520 May 16 22:39 result.tar.gz
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc     11013 May 16 22:39 runtime_log.err
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc       657 May 16 22:39 9G4MDmB6uZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlHKKDmKzyIOn.diag
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc      8192 May 17 03:38 boinc_mmap_file
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc        28 May 17 03:38 wrapper_checkpoint.txt
[2025-05-17 03:38:28] -rw-r--r--. 1 boinc boinc     20590 May 17 03:38 stderr.txt
[2025-05-17 03:38:28] HITS file was successfully produced:
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc 195389198 May 16 22:36 shared/HITS.pool.root.1
[2025-05-17 03:38:28]  *** Contents of shared directory: ***
[2025-05-17 03:38:28] total 407848
[2025-05-17 03:38:28] -rw-r--r--. 2 boinc boinc 219680878 May 16 17:36 ATLAS.root_0
[2025-05-17 03:38:28] -rw-r--r--. 2 boinc boinc     17569 May 16 17:36 start_atlas.sh
[2025-05-17 03:38:28] -rw-r--r--. 2 boinc boinc    508880 May 16 17:36 input.tar.gz
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc 195389198 May 16 22:36 HITS.pool.root.1
[2025-05-17 03:38:28] -rw-------. 1 boinc boinc   2027520 May 16 22:39 result.tar.gz
03:38:30 (2947): run_atlas exited; CPU time 68645.616729
03:38:30 (2947): called boinc_finish(0)

</stderr_txt>
]]>

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