Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:13:41 (4155700): wrapper (7.7.26015): starting
05:13:41 (4155700): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 05:13:41] Arguments: --nthreads 4
[2025-05-16 05:13:41] Threads: 4
[2025-05-16 05:13:41] Checking for CVMFS
[2025-05-16 05:13:41] No cvmfs_config command found, will try listing directly
[2025-05-16 05:13:41] CVMFS is ok
[2025-05-16 05:13:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 05:13:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 05:13:41] Further information can be found at the LHC@home message board.
[2025-05-16 05:13:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 05:13:41] Checking for apptainer binary...
[2025-05-16 05:13:41] which: no apptainer in ((null))
[2025-05-16 05:13:41] apptainer is not installed, using version from CVMFS
[2025-05-16 05:13:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 05:13:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-05-16 05:13:41] apptainer works
[2025-05-16 05:13:41] Set ATHENA_PROC_NUMBER=4
[2025-05-16 05:13:41] Set ATHENA_CORE_NUMBER=4
[2025-05-16 05:13:41] Starting ATLAS job with PandaID=6650438069
[2025-05-16 05:13:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 08:13:31]  *** The last 200 lines of the pilot log: ***
[2025-05-16 08:13:31] 2025-05-16 06:13:13,035 | INFO     | mean y: 2313195.941520468
[2025-05-16 08:13:31] 2025-05-16 06:13:13,035 | INFO     | -- intersect: -43799647822.63851
[2025-05-16 08:13:31] 2025-05-16 06:13:13,035 | INFO     | intersect: -43799647822.63851
[2025-05-16 08:13:31] 2025-05-16 06:13:13,035 | INFO     | chi2: 1.696424835064532
[2025-05-16 08:13:31] 2025-05-16 06:13:13,035 | INFO     | current chi2=1.696424835064532 (change=58.953013077732884 %)
[2025-05-16 08:13:31] 2025-05-16 06:13:13,035 | INFO     | sum of square deviations: 1418361477.5
[2025-05-16 08:13:31] 2025-05-16 06:13:13,036 | INFO     | sum of deviations: 5196073391.0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,036 | INFO     | mean x: 1747370896.5
[2025-05-16 08:13:31] 2025-05-16 06:13:13,036 | INFO     | mean y: 2352077.638554217
[2025-05-16 08:13:31] 2025-05-16 06:13:13,036 | INFO     | -- intersect: -6399025542.624306
[2025-05-16 08:13:31] 2025-05-16 06:13:13,036 | INFO     | intersect: -6399025542.624306
[2025-05-16 08:13:31] 2025-05-16 06:13:13,036 | INFO     | chi2: 0.1025294576389246
[2025-05-16 08:13:31] 2025-05-16 06:13:13,036 | INFO     | current chi2=0.1025294576389246 (change=93.95614497502777 %)
[2025-05-16 08:13:31] 2025-05-16 06:13:13,036 | INFO     | sum of square deviations: 1294014960.0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,037 | INFO     | sum of deviations: -1370358473.0000002
[2025-05-16 08:13:31] 2025-05-16 06:13:13,037 | INFO     | mean x: 1747371049.0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,037 | INFO     | mean y: 2360024.7763975156
[2025-05-16 08:13:31] 2025-05-16 06:13:13,037 | INFO     | -- intersect: 1852821415.4793677
[2025-05-16 08:13:31] 2025-05-16 06:13:13,037 | INFO     | intersect: 1852821415.4793677
[2025-05-16 08:13:31] 2025-05-16 06:13:13,037 | INFO     | chi2: 0.0017826677343553237
[2025-05-16 08:13:31] 2025-05-16 06:13:13,037 | INFO     | current chi2=0.0017826677343553237 (change=98.26131165090788 %)
[2025-05-16 08:13:31] 2025-05-16 06:13:13,037 | INFO     | sum of square deviations: 1177156955.0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,038 | INFO     | sum of deviations: -1816208144.0000005
[2025-05-16 08:13:31] 2025-05-16 06:13:13,038 | INFO     | mean x: 1747371201.5
[2025-05-16 08:13:31] 2025-05-16 06:13:13,038 | INFO     | mean y: 2360605.9487179485
[2025-05-16 08:13:31] 2025-05-16 06:13:13,038 | INFO     | -- intersect: 2698339076.173503
[2025-05-16 08:13:31] 2025-05-16 06:13:13,038 | INFO     | intersect: 2698339076.173503
[2025-05-16 08:13:31] 2025-05-16 06:13:13,038 | INFO     | chi2: 0.0012335638735887573
[2025-05-16 08:13:31] 2025-05-16 06:13:13,038 | INFO     | current chi2=0.0012335638735887573 (change=30.802367159303635 %)
[2025-05-16 08:13:31] 2025-05-16 06:13:13,038 | INFO     | sum of square deviations: 1067554900.0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,039 | INFO     | sum of deviations: -2073546769.9999998
[2025-05-16 08:13:31] 2025-05-16 06:13:13,039 | INFO     | mean x: 1747371354.0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,039 | INFO     | mean y: 2360961.8013245035
[2025-05-16 08:13:31] 2025-05-16 06:13:13,039 | INFO     | -- intersect: 3396337446.8300815
[2025-05-16 08:13:31] 2025-05-16 06:13:13,039 | INFO     | intersect: 3396337446.8300815
[2025-05-16 08:13:31] 2025-05-16 06:13:13,039 | INFO     | chi2: 0.0008915845968192459
[2025-05-16 08:13:31] 2025-05-16 06:13:13,039 | INFO     | current chi2=0.0008915845968192459 (change=27.722867383802758 %)
[2025-05-16 08:13:31] 2025-05-16 06:13:13,039 | INFO     | sum of square deviations: 964976232.5
[2025-05-16 08:13:31] 2025-05-16 06:13:13,040 | INFO     | sum of deviations: -2038083017.0000002
[2025-05-16 08:13:31] 2025-05-16 06:13:13,040 | INFO     | mean x: 1747371506.5
[2025-05-16 08:13:31] 2025-05-16 06:13:13,040 | INFO     | mean y: 2360908.9589041094
[2025-05-16 08:13:31] 2025-05-16 06:13:13,040 | INFO     | -- intersect: 3692905890.1145473
[2025-05-16 08:13:31] 2025-05-16 06:13:13,040 | INFO     | intersect: 3692905890.1145473
[2025-05-16 08:13:31] 2025-05-16 06:13:13,040 | INFO     | chi2: 0.0008298025931082868
[2025-05-16 08:13:31] 2025-05-16 06:13:13,040 | INFO     | current chi2=0.0008298025931082868 (change=6.929460640231806 %)
[2025-05-16 08:13:31] 2025-05-16 06:13:13,040 | INFO     | left removable region: 60
[2025-05-16 08:13:31] 2025-05-16 06:13:13,040 | INFO     | sum of square deviations: 412686807.5
[2025-05-16 08:13:31] 2025-05-16 06:13:13,041 | INFO     | sum of deviations: -1469516535.0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,041 | INFO     | mean x: 1747372238.5
[2025-05-16 08:13:31] 2025-05-16 06:13:13,041 | INFO     | mean y: 2360109.090909091
[2025-05-16 08:13:31] 2025-05-16 06:13:13,041 | INFO     | -- intersect: 6224493578.370064
[2025-05-16 08:13:31] 2025-05-16 06:13:13,041 | INFO     | intersect: 6224493578.370064
[2025-05-16 08:13:31] 2025-05-16 06:13:13,041 | INFO     | chi2: 0.0005547733717759252
[2025-05-16 08:13:31] 2025-05-16 06:13:13,041 | INFO     | -- intersect: 6224493578.370064
[2025-05-16 08:13:31] 2025-05-16 06:13:13,041 | INFO     | current memory leak: -3.56 B/s (using 110 data points, chi2=0.00)
[2025-05-16 08:13:31] 2025-05-16 06:13:13,041 | INFO     | ..............................
[2025-05-16 08:13:31] 2025-05-16 06:13:13,042 | INFO     | . Timing measurements:
[2025-05-16 08:13:31] 2025-05-16 06:13:13,042 | INFO     | . get job = 0 s
[2025-05-16 08:13:31] 2025-05-16 06:13:13,042 | INFO     | . initial setup = 1 s
[2025-05-16 08:13:31] 2025-05-16 06:13:13,042 | INFO     | . payload setup = 5 s
[2025-05-16 08:13:31] 2025-05-16 06:13:13,042 | INFO     | . stage-in = 0 s
[2025-05-16 08:13:31] 2025-05-16 06:13:13,042 | INFO     | . payload execution = 10732 s
[2025-05-16 08:13:31] 2025-05-16 06:13:13,042 | INFO     | . stage-out = 0 s
[2025-05-16 08:13:31] 2025-05-16 06:13:13,042 | INFO     | . log creation = 0 s
[2025-05-16 08:13:31] 2025-05-16 06:13:13,042 | INFO     | ..............................
[2025-05-16 08:13:31] 2025-05-16 06:13:13,118 | INFO     | 
[2025-05-16 08:13:31] 2025-05-16 06:13:13,118 | INFO     | job summary report
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | --------------------------------------------------
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | PanDA job id: 6650438069
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | task id: 44638099
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | errors: (none)
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | pilot state: finished 
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | transexitcode: 0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | exeerrorcode: 0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | exeerrordiag: 
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | exitcode: 0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | exitmsg: OK
[2025-05-16 08:13:31] 2025-05-16 06:13:13,119 | INFO     | cpuconsumptiontime: 39284 s
[2025-05-16 08:13:31] 2025-05-16 06:13:13,120 | INFO     | nevents: 400
[2025-05-16 08:13:31] 2025-05-16 06:13:13,120 | INFO     | neventsw: 0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,120 | INFO     | pid: 4166421
[2025-05-16 08:13:31] 2025-05-16 06:13:13,120 | INFO     | pgrp: 4166421
[2025-05-16 08:13:31] 2025-05-16 06:13:13,120 | INFO     | corecount: 4
[2025-05-16 08:13:31] 2025-05-16 06:13:13,120 | INFO     | event service: False
[2025-05-16 08:13:31] 2025-05-16 06:13:13,120 | INFO     | sizes: {0: 2393552, 1: 2393751, 5: 2393957, 11: 2394013, 10741: 2422946, 10742: 2422945, 10743: 2432092, 10745: 2432148, 10748: 2432318}
[2025-05-16 08:13:31] 2025-05-16 06:13:13,120 | INFO     | --------------------------------------------------
[2025-05-16 08:13:31] 2025-05-16 06:13:13,120 | INFO     | 
[2025-05-16 08:13:31] 2025-05-16 06:13:13,120 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 08:13:31] 2025-05-16 06:13:13,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,140 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 08:13:31] 2025-05-16 06:13:13,140 | INFO     | job 6650438069 has completed (purged errors)
[2025-05-16 08:13:31] 2025-05-16 06:13:13,140 | INFO     | overall cleanup function is called
[2025-05-16 08:13:31] 2025-05-16 06:13:14,147 | INFO     | --- collectZombieJob: --- 10, [4166421]
[2025-05-16 08:13:31] 2025-05-16 06:13:14,147 | INFO     | zombie collector waiting for pid 4166421
[2025-05-16 08:13:31] 2025-05-16 06:13:14,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 08:13:31] 2025-05-16 06:13:14,147 | INFO     | collected zombie processes
[2025-05-16 08:13:31] 2025-05-16 06:13:14,147 | INFO     | will attempt to kill all subprocesses of pid=4166421
[2025-05-16 08:13:31] 2025-05-16 06:13:14,318 | INFO     | process IDs to be killed: [4166421] (in reverse order)
[2025-05-16 08:13:31] 2025-05-16 06:13:14,379 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 08:13:31] 2025-05-16 06:13:14,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 08:13:31] 2025-05-16 06:13:14,385 | INFO     | did not find any defunct processes belonging to 4166421
[2025-05-16 08:13:31] 2025-05-16 06:13:14,390 | INFO     | did not find any defunct processes belonging to 4166421
[2025-05-16 08:13:31] 2025-05-16 06:13:14,390 | INFO     | ready for new job
[2025-05-16 08:13:31] 2025-05-16 06:13:14,390 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 08:13:31] 2025-05-16 06:13:14,392 | INFO     | **************************************
[2025-05-16 08:13:31] 2025-05-16 06:13:14,392 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 08:13:31] 2025-05-16 06:13:14,392 | INFO     | **************************************
[2025-05-16 08:13:31] 2025-05-16 06:13:14,392 | INFO     | 
[2025-05-16 08:13:31] 2025-05-16 06:13:14,394 | INFO     | architecture information:
[2025-05-16 08:13:31] 2025-05-16 06:13:14,394 | INFO     | executing command: cat /etc/os-release
[2025-05-16 08:13:31] 2025-05-16 06:13:14,403 | INFO     | cat /etc/os-release:
[2025-05-16 08:13:31] NAME="CentOS Linux"
[2025-05-16 08:13:31] VERSION="7 (Core)"
[2025-05-16 08:13:31] ID="centos"
[2025-05-16 08:13:31] ID_LIKE="rhel fedora"
[2025-05-16 08:13:31] VERSION_ID="7"
[2025-05-16 08:13:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 08:13:31] ANSI_COLOR="0;31"
[2025-05-16 08:13:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 08:13:31] HOME_URL="https://www.centos.org/"
[2025-05-16 08:13:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 08:13:31] 
[2025-05-16 08:13:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 08:13:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 08:13:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 08:13:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 08:13:31] 
[2025-05-16 08:13:31] 2025-05-16 06:13:14,403 | INFO     | **************************************
[2025-05-16 08:13:31] 2025-05-16 06:13:14,906 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-05-16 08:13:31] 2025-05-16 06:13:14,917 | INFO     | sufficient remaining disk space (689158750208 B)
[2025-05-16 08:13:31] 2025-05-16 06:13:14,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 08:13:31] 2025-05-16 06:13:14,918 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 08:13:31] 2025-05-16 06:13:14,918 | INFO     | update_server=False
[2025-05-16 08:13:31] 2025-05-16 06:13:14,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 08:13:31] 2025-05-16 06:13:14,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 08:13:31] 2025-05-16 06:13:14,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 08:13:31] 2025-05-16 06:13:14,978 | INFO     | aborting loop
[2025-05-16 08:13:31] 2025-05-16 06:13:15,096 | INFO     | PID=4159425 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-16 08:13:31] 2025-05-16 06:13:15,096 | INFO     | .. there are 8 such processes running
[2025-05-16 08:13:31] 2025-05-16 06:13:15,096 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 08:13:31] 2025-05-16 06:13:15,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 08:13:31] 2025-05-16 06:13:15,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 08:13:31] 2025-05-16 06:13:15,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 08:13:31] 2025-05-16 06:13:15,845 | INFO     | all data control threads have been joined
[2025-05-16 08:13:31] 2025-05-16 06:13:15,853 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 08:13:31] 2025-05-16 06:13:15,924 | INFO     | [job] retrieve thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:15,924 | INFO     | [job] queue monitor thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:15,981 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:15,983 | INFO     | [job] job monitor thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:16,079 | INFO     | all payload control threads have been joined
[2025-05-16 08:13:31] 2025-05-16 06:13:16,087 | INFO     | all job control threads have been joined
[2025-05-16 08:13:31] 2025-05-16 06:13:16,732 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:16,746 | INFO     | [job] validate thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:16,760 | INFO     | [payload] failed_post thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:16,851 | INFO     | [data] control thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:16,907 | INFO     | [data] copytool_in thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:17,074 | INFO     | [payload] validate_post thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:17,084 | INFO     | [payload] control thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:17,093 | INFO     | [job] control thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:17,157 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:17,858 | INFO     | [data] copytool_out thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:19,483 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:25,544 | INFO     | job.realtimelogging is not enabled
[2025-05-16 08:13:31] 2025-05-16 06:13:26,549 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 08:13:31] 2025-05-16 06:13:26,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23332262766400)>', '<ExcThread(monitor, started 23332021823232)>']
[2025-05-16 08:13:31] 2025-05-16 06:13:27,155 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 08:13:31] 2025-05-16 06:13:27,155 | INFO     | [monitor] control thread has ended
[2025-05-16 08:13:31] 2025-05-16 06:13:31,671 | INFO     | all workflow threads have been joined
[2025-05-16 08:13:31] 2025-05-16 06:13:31,671 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 08:13:31] 2025-05-16 06:13:31,671 | INFO     | traces error code: 0
[2025-05-16 08:13:31] 2025-05-16 06:13:31,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 08:13:31] 2025-05-16 06:13:31,768 [wrapper] ==== pilot stdout END ====
[2025-05-16 08:13:31] 2025-05-16 06:13:31,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 08:13:31] 2025-05-16 06:13:31,772 [wrapper] pilotpid: 4159425
[2025-05-16 08:13:31] 2025-05-16 06:13:31,774 [wrapper] Pilot exit status: 0
[2025-05-16 08:13:31] 2025-05-16 06:13:31,780 [wrapper] pandaids: 6650438069
[2025-05-16 08:13:31] 2025-05-16 06:13:31,818 [wrapper] cleanup supervisor_pilot  213966 4159426
[2025-05-16 08:13:31] 2025-05-16 06:13:31,821 [wrapper] Test setup, not cleaning
[2025-05-16 08:13:31] 2025-05-16 06:13:31,822 [wrapper] apfmon messages muted
[2025-05-16 08:13:31] 2025-05-16 06:13:31,825 [wrapper] ==== wrapper stdout END ====
[2025-05-16 08:13:31] 2025-05-16 06:13:31,826 [wrapper] ==== wrapper stderr END ====
[2025-05-16 08:13:31]  *** Error codes and diagnostics ***
[2025-05-16 08:13:31]     "exeErrorCode": 0,
[2025-05-16 08:13:31]     "exeErrorDiag": "",
[2025-05-16 08:13:31]     "pilotErrorCode": 0,
[2025-05-16 08:13:31]     "pilotErrorDiag": "",
[2025-05-16 08:13:31]  *** Listing of results directory ***
[2025-05-16 08:13:31] total 417152
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc    495897 May 15 17:21 pilot3.tar.gz
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc      5111 May 15 17:46 queuedata.json
[2025-05-16 08:13:31] -rwx------ 1 boinc boinc     37140 May 15 17:47 runpilot2-wrapper.sh
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc       100 May 16 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 08:13:31] -rwxr-xr-x 1 boinc boinc      7986 May 16 05:13 run_atlas
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc       105 May 16 05:13 job.xml
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc      6634 May 16 05:13 init_data.xml
[2025-05-16 08:13:31] -rw-r--r-- 2 boinc boinc 222341592 May 16 05:13 EVNT.44638096._001614.pool.root.1
[2025-05-16 08:13:31] -rw-r--r-- 2 boinc boinc     17569 May 16 05:13 start_atlas.sh
[2025-05-16 08:13:31] drwxrwx--x 2 boinc boinc      4096 May 16 05:13 shared
[2025-05-16 08:13:31] -rw-r--r-- 2 boinc boinc    508873 May 16 05:13 input.tar.gz
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc         0 May 16 05:13 boinc_lockfile
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc      2539 May 16 05:13 pandaJob.out
[2025-05-16 08:13:31] -rw------- 1 boinc boinc       424 May 16 05:13 setup.sh.local
[2025-05-16 08:13:31] -rw------- 1 boinc boinc    995903 May 16 05:13 agis_schedconf.cvmfs.json
[2025-05-16 08:13:31] -rw------- 1 boinc boinc   1596741 May 16 05:13 agis_ddmendpoints.agis.ALL.json
[2025-05-16 08:13:31] drwx------ 4 boinc boinc      4096 May 16 05:13 pilot3
[2025-05-16 08:13:31] -rw------- 1 boinc boinc 198327395 May 16 08:12 HITS.44638099._026065.pool.root.1
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc       530 May 16 08:12 boinc_task_state.xml
[2025-05-16 08:13:31] -rw------- 1 boinc boinc      1032 May 16 08:13 memory_monitor_summary.json
[2025-05-16 08:13:31] -rw------- 1 boinc boinc    304577 May 16 08:13 log.44638099._026065.job.log.tgz.1
[2025-05-16 08:13:31] -rw------- 1 boinc boinc        95 May 16 08:13 pilot_heartbeat.json
[2025-05-16 08:13:31] -rw------- 1 boinc boinc      7723 May 16 08:13 heartbeat.json
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc      8192 May 16 08:13 boinc_mmap_file
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc        28 May 16 08:13 wrapper_checkpoint.txt
[2025-05-16 08:13:31] -rw------- 1 boinc boinc      4829 May 16 08:13 pilotlog.txt
[2025-05-16 08:13:31] -rw------- 1 boinc boinc   1018599 May 16 08:13 log.44638099._026065.job.log.1
[2025-05-16 08:13:31] -rw------- 1 boinc boinc       357 May 16 08:13 output.list
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc       620 May 16 08:13 runtime_log
[2025-05-16 08:13:31] -rw------- 1 boinc boinc   1341440 May 16 08:13 result.tar.gz
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc     11424 May 16 08:13 runtime_log.err
[2025-05-16 08:13:31] -rw------- 1 boinc boinc       664 May 16 08:13 Qx5LDmxypZ7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGiHKDmZLVrNm.diag
[2025-05-16 08:13:31] -rw-r--r-- 1 boinc boinc     20705 May 16 08:13 stderr.txt
[2025-05-16 08:13:31] HITS file was successfully produced:
[2025-05-16 08:13:31] -rw------- 1 boinc boinc 198327395 May 16 08:12 shared/HITS.pool.root.1
[2025-05-16 08:13:31]  *** Contents of shared directory: ***
[2025-05-16 08:13:31] total 412652
[2025-05-16 08:13:31] -rw-r--r-- 2 boinc boinc 222341592 May 16 05:13 ATLAS.root_0
[2025-05-16 08:13:31] -rw-r--r-- 2 boinc boinc     17569 May 16 05:13 start_atlas.sh
[2025-05-16 08:13:31] -rw-r--r-- 2 boinc boinc    508873 May 16 05:13 input.tar.gz
[2025-05-16 08:13:31] -rw------- 1 boinc boinc 198327395 May 16 08:12 HITS.pool.root.1
[2025-05-16 08:13:31] -rw------- 1 boinc boinc   1341440 May 16 08:13 result.tar.gz
08:13:33 (4155700): run_atlas exited; CPU time 39663.090680
08:13:33 (4155700): called boinc_finish(0)

</stderr_txt>
]]>

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