Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:40:17 (17553): wrapper (7.7.26015): starting
08:40:17 (17553): wrapper: running run_atlas (--nthreads 8)
[2025-05-16 08:40:17] Arguments: --nthreads 8
[2025-05-16 08:40:17] Threads: 8
[2025-05-16 08:40:17] Checking for CVMFS
[2025-05-16 08:40:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 08:40:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 08:40:18] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 08:40:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 08:40:19] 2.11.2.0 19741 5488 77808 146053 3 59 14654731 25165825 4649 130560 0 4507299 99.733 6298709 1072 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-16 08:40:19] CVMFS is ok
[2025-05-16 08:40:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 08:40:19] Checking for apptainer binary...
[2025-05-16 08:40:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 08:40:19] Running /usr/bin/apptainer --version
[2025-05-16 08:40:19] apptainer version 1.3.2-1.el7
[2025-05-16 08:40:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 09:10:43] cg-vwn339.simple-grid.lan
[2025-05-16 09:10:43] apptainer works
[2025-05-16 09:10:44] Set ATHENA_PROC_NUMBER=8
[2025-05-16 09:10:44] Set ATHENA_CORE_NUMBER=8
[2025-05-16 09:10:44] Starting ATLAS job with PandaID=6650551784
[2025-05-16 09:10:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/33 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 16:48:36]  *** The last 200 lines of the pilot log: ***
[2025-05-16 16:48:36] 2025-05-16 12:45:32,678 | INFO     | -- intersect: -35430808722.400375
[2025-05-16 16:48:36] 2025-05-16 12:45:32,678 | INFO     | intersect: -35430808722.400375
[2025-05-16 16:48:36] 2025-05-16 12:45:32,679 | INFO     | chi2: 8.460400938218166
[2025-05-16 16:48:36] 2025-05-16 12:45:32,679 | INFO     | current chi2=8.460400938218166 (change=7.766780217671947 %)
[2025-05-16 16:48:36] 2025-05-16 12:45:32,679 | INFO     | right removable region: 312
[2025-05-16 16:48:36] 2025-05-16 12:45:32,679 | INFO     | sum of square deviations: 9508390372.0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,682 | INFO     | sum of deviations: 69439818358.00003
[2025-05-16 16:48:36] 2025-05-16 12:45:32,683 | INFO     | mean x: 1747389921.0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,683 | INFO     | mean y: 2473812.2492012777
[2025-05-16 16:48:36] 2025-05-16 12:45:32,683 | INFO     | -- intersect: -12758722769.68264
[2025-05-16 16:48:36] 2025-05-16 12:45:32,683 | INFO     | intersect: -12758722769.68264
[2025-05-16 16:48:36] 2025-05-16 12:45:32,684 | INFO     | chi2: 4.681901589832956
[2025-05-16 16:48:36] 2025-05-16 12:45:32,684 | INFO     | current chi2=4.681901589832956 (change=48.95905507461203 %)
[2025-05-16 16:48:36] 2025-05-16 12:45:32,684 | INFO     | sum of square deviations: 9059954057.0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,687 | INFO     | sum of deviations: -1927332759.0000076
[2025-05-16 16:48:36] 2025-05-16 12:45:32,687 | INFO     | mean x: 1747390073.5
[2025-05-16 16:48:36] 2025-05-16 12:45:32,688 | INFO     | mean y: 2498054.714285714
[2025-05-16 16:48:36] 2025-05-16 12:45:32,688 | INFO     | -- intersect: 374222029.27527297
[2025-05-16 16:48:36] 2025-05-16 12:45:32,688 | INFO     | intersect: 374222029.27527297
[2025-05-16 16:48:36] 2025-05-16 12:45:32,688 | INFO     | chi2: 2.6652157123560314
[2025-05-16 16:48:36] 2025-05-16 12:45:32,688 | INFO     | current chi2=2.6652157123560314 (change=43.074076607169296 %)
[2025-05-16 16:48:36] 2025-05-16 12:45:32,689 | INFO     | sum of square deviations: 8625843592.0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,692 | INFO     | sum of deviations: -59841084241.0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,692 | INFO     | mean x: 1747390226.0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,692 | INFO     | mean y: 2518399.858085809
[2025-05-16 16:48:36] 2025-05-16 12:45:32,692 | INFO     | -- intersect: 12124895139.096094
[2025-05-16 16:48:36] 2025-05-16 12:45:32,692 | INFO     | intersect: 12124895139.096094
[2025-05-16 16:48:36] 2025-05-16 12:45:32,693 | INFO     | chi2: 1.353533345291631
[2025-05-16 16:48:36] 2025-05-16 12:45:32,693 | INFO     | current chi2=1.353533345291631 (change=49.21486696117676 %)
[2025-05-16 16:48:36] 2025-05-16 12:45:32,693 | INFO     | sum of square deviations: 8205826414.5
[2025-05-16 16:48:36] 2025-05-16 12:45:32,696 | INFO     | sum of deviations: -81959509537.0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,696 | INFO     | mean x: 1747390378.5
[2025-05-16 16:48:36] 2025-05-16 12:45:32,696 | INFO     | mean y: 2526372.5570469797
[2025-05-16 16:48:36] 2025-05-16 12:45:32,697 | INFO     | -- intersect: 17455400849.461178
[2025-05-16 16:48:36] 2025-05-16 12:45:32,697 | INFO     | intersect: 17455400849.461178
[2025-05-16 16:48:36] 2025-05-16 12:45:32,697 | INFO     | chi2: 1.0035346890859653
[2025-05-16 16:48:36] 2025-05-16 12:45:32,697 | INFO     | current chi2=1.0035346890859653 (change=25.858148040693834 %)
[2025-05-16 16:48:36] 2025-05-16 12:45:32,698 | INFO     | sum of square deviations: 7799669962.0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,701 | INFO     | sum of deviations: -76548183555.0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,701 | INFO     | mean x: 1747390531.0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,701 | INFO     | mean y: 2524326.6689419793
[2025-05-16 16:48:36] 2025-05-16 12:45:32,701 | INFO     | -- intersect: 17151912923.998531
[2025-05-16 16:48:36] 2025-05-16 12:45:32,701 | INFO     | intersect: 17151912923.998531
[2025-05-16 16:48:36] 2025-05-16 12:45:32,702 | INFO     | chi2: 0.9928377313652278
[2025-05-16 16:48:36] 2025-05-16 12:45:32,702 | INFO     | current chi2=0.9928377313652278 (change=1.0659280478366406 %)
[2025-05-16 16:48:36] 2025-05-16 12:45:32,702 | INFO     | left removable region: 50
[2025-05-16 16:48:36] 2025-05-16 12:45:32,702 | INFO     | sum of square deviations: 5576683165.5
[2025-05-16 16:48:36] 2025-05-16 12:45:32,705 | INFO     | sum of deviations: -4769396721.499999
[2025-05-16 16:48:36] 2025-05-16 12:45:32,705 | INFO     | mean x: 1747391110.5
[2025-05-16 16:48:36] 2025-05-16 12:45:32,705 | INFO     | mean y: 2510091.9503816795
[2025-05-16 16:48:36] 2025-05-16 12:45:32,705 | INFO     | -- intersect: 1496947051.3880305
[2025-05-16 16:48:36] 2025-05-16 12:45:32,705 | INFO     | intersect: 1496947051.3880305
[2025-05-16 16:48:36] 2025-05-16 12:45:32,705 | INFO     | chi2: 0.04824550057454313
[2025-05-16 16:48:36] 2025-05-16 12:45:32,706 | INFO     | -- intersect: 1496947051.3880305
[2025-05-16 16:48:36] 2025-05-16 12:45:32,706 | INFO     | current memory leak: -0.86 B/s (using 262 data points, chi2=0.05)
[2025-05-16 16:48:36] 2025-05-16 12:45:32,707 | INFO     | ..............................
[2025-05-16 16:48:36] 2025-05-16 12:45:32,707 | INFO     | . Timing measurements:
[2025-05-16 16:48:36] 2025-05-16 12:45:32,707 | INFO     | . get job = 0 s
[2025-05-16 16:48:36] 2025-05-16 12:45:32,707 | INFO     | . initial setup = 7 s
[2025-05-16 16:48:36] 2025-05-16 12:45:32,707 | INFO     | . payload setup = 115 s
[2025-05-16 16:48:36] 2025-05-16 12:45:32,707 | INFO     | . stage-in = 0 s
[2025-05-16 16:48:36] 2025-05-16 12:45:32,707 | INFO     | . payload execution = 19501 s
[2025-05-16 16:48:36] 2025-05-16 12:45:32,707 | INFO     | . stage-out = 2 s
[2025-05-16 16:48:36] 2025-05-16 12:45:32,707 | INFO     | . log creation = 0 s
[2025-05-16 16:48:36] 2025-05-16 12:45:32,707 | INFO     | ..............................
[2025-05-16 16:48:36] 2025-05-16 12:45:32,835 | INFO     | 
[2025-05-16 16:48:36] 2025-05-16 12:45:32,835 | INFO     | job summary report
[2025-05-16 16:48:36] 2025-05-16 12:45:32,835 | INFO     | --------------------------------------------------
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | PanDA job id: 6650551784
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | task id: 44638099
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | errors: (none)
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | pilot state: finished 
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | transexitcode: 0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | exeerrorcode: 0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | exeerrordiag: 
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | exitcode: 0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | exitmsg: OK
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | cpuconsumptiontime: 70913 s
[2025-05-16 16:48:36] 2025-05-16 12:45:32,836 | INFO     | nevents: 400
[2025-05-16 16:48:36] 2025-05-16 12:45:32,837 | INFO     | neventsw: 0
[2025-05-16 16:48:36] 2025-05-16 12:45:32,837 | INFO     | pid: 14080
[2025-05-16 16:48:36] 2025-05-16 12:45:32,837 | INFO     | pgrp: 14080
[2025-05-16 16:48:36] 2025-05-16 12:45:32,837 | INFO     | corecount: 8
[2025-05-16 16:48:36] 2025-05-16 12:45:32,837 | INFO     | event service: False
[2025-05-16 16:48:36] 2025-05-16 12:45:32,837 | INFO     | sizes: {0: 2393714, 1: 2393714, 12: 2393742, 22: 2393770, 33: 2393798, 44: 2393854, 55: 2394010, 65: 2394038, 76: 2394066, 87: 2394122, 91: 2394356, 98: 2394664, 1
[2025-05-16 16:48:36] 2025-05-16 12:45:32,837 | INFO     | --------------------------------------------------
[2025-05-16 16:48:36] 2025-05-16 12:45:32,837 | INFO     | 
[2025-05-16 16:48:36] 2025-05-16 12:45:32,837 | INFO     | executing command: ls -lF /var/lib/boinc/slots/33
[2025-05-16 16:48:36] 2025-05-16 12:45:33,310 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,311 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,311 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,311 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,312 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 16:48:36] 2025-05-16 12:45:33,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,312 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 16:48:36] 2025-05-16 12:45:33,313 | INFO     | job 6650551784 has completed (purged errors)
[2025-05-16 16:48:36] 2025-05-16 12:45:33,313 | INFO     | overall cleanup function is called
[2025-05-16 16:48:36] 2025-05-16 12:45:34,322 | INFO     | --- collectZombieJob: --- 10, [14080]
[2025-05-16 16:48:36] 2025-05-16 12:45:34,322 | INFO     | zombie collector waiting for pid 14080
[2025-05-16 16:48:36] 2025-05-16 12:45:34,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 16:48:36] 2025-05-16 12:45:34,322 | INFO     | collected zombie processes
[2025-05-16 16:48:36] 2025-05-16 12:45:34,322 | INFO     | will attempt to kill all subprocesses of pid=14080
[2025-05-16 16:48:36] 2025-05-16 12:45:34,513 | INFO     | process IDs to be killed: [14080] (in reverse order)
[2025-05-16 16:48:36] 2025-05-16 12:45:34,626 | INFO     | PID=7559 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-16 16:48:36] 2025-05-16 12:45:34,626 | INFO     | .. there are 9 such processes running
[2025-05-16 16:48:36] 2025-05-16 12:45:35,482 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 16:48:36] 2025-05-16 12:45:35,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 16:48:36] 2025-05-16 12:45:35,486 | INFO     | did not find any defunct processes belonging to 14080
[2025-05-16 16:48:36] 2025-05-16 12:45:35,489 | INFO     | did not find any defunct processes belonging to 14080
[2025-05-16 16:48:36] 2025-05-16 12:45:35,489 | INFO     | ready for new job
[2025-05-16 16:48:36] 2025-05-16 12:45:35,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 16:48:36] 2025-05-16 12:45:35,491 | INFO     | **************************************
[2025-05-16 16:48:36] 2025-05-16 12:45:35,491 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 16:48:36] 2025-05-16 12:45:35,491 | INFO     | **************************************
[2025-05-16 16:48:36] 2025-05-16 12:45:35,491 | INFO     | 
[2025-05-16 16:48:36] 2025-05-16 12:45:35,492 | INFO     | pilot is running in a VM
[2025-05-16 16:48:36] 2025-05-16 12:45:35,492 | INFO     | architecture information:
[2025-05-16 16:48:36] 2025-05-16 12:45:35,508 | INFO     | executing command: cat /etc/os-release
[2025-05-16 16:48:36] 2025-05-16 12:45:35,735 | INFO     | cat /etc/os-release:
[2025-05-16 16:48:36] NAME="CentOS Linux"
[2025-05-16 16:48:36] VERSION="7 (Core)"
[2025-05-16 16:48:36] ID="centos"
[2025-05-16 16:48:36] ID_LIKE="rhel fedora"
[2025-05-16 16:48:36] VERSION_ID="7"
[2025-05-16 16:48:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 16:48:36] ANSI_COLOR="0;31"
[2025-05-16 16:48:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 16:48:36] HOME_URL="https://www.centos.org/"
[2025-05-16 16:48:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 16:48:36] 
[2025-05-16 16:48:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 16:48:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 16:48:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 16:48:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 16:48:36] 
[2025-05-16 16:48:36] 2025-05-16 12:45:35,736 | INFO     | **************************************
[2025-05-16 16:48:36] 2025-05-16 12:45:36,239 | INFO     | executing command: df -mP /var/lib/boinc/slots/33
[2025-05-16 16:48:36] 2025-05-16 12:45:36,425 | INFO     | sufficient remaining disk space (496859348992 B)
[2025-05-16 16:48:36] 2025-05-16 12:45:36,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 16:48:36] 2025-05-16 12:45:36,425 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 16:48:36] 2025-05-16 12:45:36,425 | INFO     | update_server=False
[2025-05-16 16:48:36] 2025-05-16 12:45:36,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 16:48:36] 2025-05-16 12:45:36,633 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 16:48:36] 2025-05-16 12:45:36,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 16:48:36] 2025-05-16 12:45:36,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 16:48:36] 2025-05-16 12:45:36,669 | INFO     | all data control threads have been joined
[2025-05-16 16:48:36] 2025-05-16 12:45:36,673 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 16:48:36] 2025-05-16 12:45:36,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 16:48:36] 2025-05-16 12:45:36,715 | INFO     | aborting loop
[2025-05-16 16:48:36] 2025-05-16 12:45:37,028 | INFO     | all job control threads have been joined
[2025-05-16 16:48:36] 2025-05-16 12:45:37,185 | INFO     | all payload control threads have been joined
[2025-05-16 16:48:36] 2025-05-16 12:45:37,431 | INFO     | [job] retrieve thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:37,675 | INFO     | [data] control thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:37,721 | INFO     | [job] job monitor thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:37,761 | INFO     | [data] copytool_in thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:37,803 | INFO     | [payload] failed_post thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:37,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 16:48:36] 2025-05-16 12:45:37,860 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:37,920 | INFO     | [payload] validate_post thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:38,034 | INFO     | [job] control thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:38,191 | INFO     | [payload] control thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:38,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:38,288 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:38,360 | INFO     | [job] validate thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:38,680 | INFO     | [data] copytool_out thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:38,687 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:38,856 | INFO     | [job] queue monitor thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:39,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 16:48:36] 2025-05-16 12:45:43,363 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 16:48:36] 2025-05-16 12:45:43,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140389670799168)>', '<ExcThread(monitor, started 140389226886912)>']
[2025-05-16 16:48:36] 2025-05-16 12:45:43,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 16:48:36] 2025-05-16 12:45:43,674 | INFO     | [monitor] control thread has ended
[2025-05-16 16:48:36] 2025-05-16 12:45:48,575 | INFO     | all workflow threads have been joined
[2025-05-16 16:48:36] 2025-05-16 12:45:48,575 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 16:48:36] 2025-05-16 12:45:48,575 | INFO     | traces error code: 0
[2025-05-16 16:48:36] 2025-05-16 12:45:48,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 16:48:36] 2025-05-16 12:45:48,824 [wrapper] ==== pilot stdout END ====
[2025-05-16 16:48:36] 2025-05-16 12:45:48,905 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 16:48:36] 2025-05-16 12:45:48,980 [wrapper] pilotpid: 7559
[2025-05-16 16:48:36] 2025-05-16 12:45:49,067 [wrapper] Pilot exit status: 0
[2025-05-16 16:48:36] 2025-05-16 12:45:49,547 [wrapper] pandaids: 6650551784
[2025-05-16 16:48:36] 2025-05-16 12:45:50,156 [wrapper] cleanup supervisor_pilot  3878 7560
[2025-05-16 16:48:36] 2025-05-16 12:45:50,253 [wrapper] Test setup, not cleaning
[2025-05-16 16:48:36] 2025-05-16 12:45:50,357 [wrapper] apfmon messages muted
[2025-05-16 16:48:36] 2025-05-16 12:45:50,407 [wrapper] ==== wrapper stdout END ====
[2025-05-16 16:48:36] 2025-05-16 12:45:50,504 [wrapper] ==== wrapper stderr END ====
[2025-05-16 16:48:36]  *** Error codes and diagnostics ***
[2025-05-16 16:48:36]     "exeErrorCode": 0,
[2025-05-16 16:48:36]     "exeErrorDiag": "",
[2025-05-16 16:48:36]     "pilotErrorCode": 0,
[2025-05-16 16:48:36]     "pilotErrorDiag": "",
[2025-05-16 16:48:36]  *** Listing of results directory ***
[2025-05-16 16:48:36] total 418040
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc    495897 May 15 19:14 pilot3.tar.gz
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc      5111 May 15 19:35 queuedata.json
[2025-05-16 16:48:36] -rwx------. 1 boinc boinc     37140 May 15 19:36 runpilot2-wrapper.sh
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc       100 May 16 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 16:48:36] -rwxr-xr-x. 1 boinc boinc      7986 May 16 08:40 run_atlas
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc       105 May 16 08:40 job.xml
[2025-05-16 16:48:36] -rw-r--r--. 2 boinc boinc 221707964 May 16 08:40 EVNT.44638096._001662.pool.root.1
[2025-05-16 16:48:36] drwxrwx--x. 2 boinc boinc        68 May 16 08:40 shared
[2025-05-16 16:48:36] -rw-r--r--. 2 boinc boinc    508884 May 16 08:40 input.tar.gz
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc      6371 May 16 08:40 init_data.xml
[2025-05-16 16:48:36] -rw-r--r--. 2 boinc boinc     17569 May 16 08:40 start_atlas.sh
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc         0 May 16 08:40 boinc_lockfile
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc      2540 May 16 09:10 pandaJob.out
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc       424 May 16 09:11 setup.sh.local
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc    989800 May 16 09:13 agis_schedconf.cvmfs.json
[2025-05-16 16:48:36] drwx------. 4 boinc boinc      4096 May 16 09:13 pilot3
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc 198258497 May 16 14:43 HITS.44638099._027286.pool.root.1
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc       531 May 16 14:43 boinc_task_state.xml
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc      1019 May 16 14:43 memory_monitor_summary.json
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc   1596741 May 16 14:44 agis_ddmendpoints.agis.ALL.json
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc    449910 May 16 14:44 log.44638099._027286.job.log.tgz.1
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc        95 May 16 14:45 pilot_heartbeat.json
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc      7694 May 16 14:45 heartbeat.json
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc      4417 May 16 14:45 pilotlog.txt
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc   1695065 May 16 14:45 log.44638099._027286.job.log.1
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc       357 May 16 14:45 output.list
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc       620 May 16 14:45 runtime_log
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc   2160640 May 16 14:45 result.tar.gz
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc     11031 May 16 14:45 runtime_log.err
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc       658 May 16 14:45 mSiMDmmgrZ7n9Rq4apOajLDm4fhM0noT9bVof3QYDmknHKDmsD8V3m.diag
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc      8192 May 16 16:48 boinc_mmap_file
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc        28 May 16 16:48 wrapper_checkpoint.txt
[2025-05-16 16:48:36] -rw-r--r--. 1 boinc boinc     20600 May 16 16:48 stderr.txt
[2025-05-16 16:48:36] HITS file was successfully produced:
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc 198258497 May 16 14:43 shared/HITS.pool.root.1
[2025-05-16 16:48:36]  *** Contents of shared directory: ***
[2025-05-16 16:48:36] total 412756
[2025-05-16 16:48:36] -rw-r--r--. 2 boinc boinc 221707964 May 16 08:40 ATLAS.root_0
[2025-05-16 16:48:36] -rw-r--r--. 2 boinc boinc    508884 May 16 08:40 input.tar.gz
[2025-05-16 16:48:36] -rw-r--r--. 2 boinc boinc     17569 May 16 08:40 start_atlas.sh
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc 198258497 May 16 14:43 HITS.pool.root.1
[2025-05-16 16:48:36] -rw-------. 1 boinc boinc   2160640 May 16 14:45 result.tar.gz
16:48:38 (17553): run_atlas exited; CPU time 71184.054374
16:48:38 (17553): called boinc_finish(0)

</stderr_txt>
]]>

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