Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-16 00:09:43 (11932): Detected: vboxwrapper 26206
2025-05-16 00:09:43 (11932): Detected: BOINC client v8.0.2
2025-05-16 00:09:44 (11932): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-05-16 00:09:44 (11932): Successfully copied 'init_data.xml' to the shared directory.
2025-05-16 00:09:44 (11932): Create VM. (boinc_b72d3e394d23c096, slot#11)
2025-05-16 00:09:45 (11932): Setting Memory Size for VM. (4800MB)
2025-05-16 00:09:45 (11932): Setting CPU Count for VM. (8)
2025-05-16 00:09:46 (11932): Setting Chipset Options for VM.
2025-05-16 00:09:46 (11932): Setting Graphics Controller Options for VM.
2025-05-16 00:09:46 (11932): Setting Boot Options for VM.
2025-05-16 00:09:46 (11932): Setting Network Configuration for NAT.
2025-05-16 00:09:47 (11932): Enabling VM Network Access.
2025-05-16 00:09:47 (11932): Disabling USB Support for VM.
2025-05-16 00:09:47 (11932): Disabling COM Port Support for VM.
2025-05-16 00:09:47 (11932): Disabling LPT Port Support for VM.
2025-05-16 00:09:48 (11932): Disabling Audio Support for VM.
2025-05-16 00:09:48 (11932): Disabling Clipboard Support for VM.
2025-05-16 00:09:48 (11932): Disabling Drag and Drop Support for VM.
2025-05-16 00:09:48 (11932): Adding storage controller(s) to VM.
2025-05-16 00:09:49 (11932): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-16 00:09:49 (11932): Adding VirtualBox Guest Additions to VM.
2025-05-16 00:09:50 (11932): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-16 00:09:50 (11932): forwarding host port 55205 to guest port 80
2025-05-16 00:09:50 (11932): Enabling remote desktop for VM.
2025-05-16 00:09:50 (11932): Required extension pack not installed, remote desktop not enabled.
2025-05-16 00:09:50 (11932): Enabling shared directory for VM.
2025-05-16 00:09:51 (11932): Starting VM using VBoxManage interface. (boinc_b72d3e394d23c096, slot#11)
2025-05-16 00:10:01 (11932): Successfully started VM. (PID = '10576')
2025-05-16 00:10:01 (11932): Reporting VM Process ID to BOINC.
2025-05-16 00:10:01 (11932): Guest Log: BIOS: VirtualBox 7.1.4
2025-05-16 00:10:01 (11932): Guest Log: CPUID EDX: 0x178bfbff
2025-05-16 00:10:01 (11932): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-16 00:10:01 (11932): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-16 00:10:01 (11932): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-16 00:10:01 (11932): Detected: Web Application Enabled (http://localhost:55205)
2025-05-16 00:10:02 (11932): Preference change detected
2025-05-16 00:10:02 (11932): Setting CPU throttle for VM. (75%)
2025-05-16 00:10:02 (11932): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-16 00:10:04 (11932): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-16 00:10:04 (11932): Guest Log: BIOS: Booting from Hard Disk...
2025-05-16 00:10:14 (11932): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-16 00:10:15 (11932): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-16 00:10:15 (11932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-16 00:11:44 (11932): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-16 00:11:44 (11932): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-16 00:16:50 (11932): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-16 00:16:50 (11932): Guest Log: 00:00:00.003522 main     Log opened 2025-05-16T00:16:47.800009000Z
2025-05-16 00:16:50 (11932): Guest Log: 00:00:00.004471 main     OS Product: Linux
2025-05-16 00:16:50 (11932): Guest Log: 00:00:00.004591 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-16 00:16:50 (11932): Guest Log: 00:00:00.004676 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-16 00:16:50 (11932): Guest Log: 00:00:00.004812 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-16 00:16:50 (11932): Guest Log: 00:00:00.004813 main     Process ID: 1423
2025-05-16 00:16:50 (11932): Guest Log: 00:00:00.004814 main     Package type: LINUX_64BITS_GENERIC
2025-05-16 00:16:50 (11932): Guest Log: 00:00:00.013060 main     5.2.32 r132073 started. Verbose level = 0
2025-05-16 00:16:52 (11932): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-16 00:16:52 (11932): Guest Log: [INFO] Mounting shared directory
2025-05-16 00:16:56 (11932): Guest Log: [INFO] Checking for init_data.xml
2025-05-16 00:17:00 (11932): Guest Log: 00:00:10.169433 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 541 303 000ns (GuestNow=1 747 369 019 451 199 000 ns GuestLast=1 747 354 607 909 896 000 ns fSetTimeLastLoop=true )
2025-05-16 00:17:32 (11932): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-16 00:17:32 (11932): Guest Log: [INFO] Detected branch: prod
2025-05-16 00:17:36 (11932): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-16 00:17:36 (11932): Guest Log: Copying input files
2025-05-16 00:17:44 (11932): Guest Log: Copied input files into RunAtlas.
2025-05-16 00:17:45 (11932): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-16 00:17:45 (11932): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-16 00:17:46 (11932): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-16 00:17:46 (11932): Guest Log: Further information can be found at the LHC@home message board.
2025-05-16 00:18:21 (11932): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-16 00:18:25 (11932): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-16 00:18:25 (11932): Guest Log: 2.6.3.0 1722 1 30176 146052 3 1 3117515 4096000 0 65024 0 0 n/a 1 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-16 00:18:34 (11932): Guest Log: copied the webapp to /var/www
2025-05-16 00:18:35 (11932): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-16 00:18:35 (11932): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-16 00:18:37 (11932): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-16 00:18:39 (11932): Guest Log:  *** Starting ATLAS job. (PandaID=6649926960 taskID=44638099) ***
2025-05-16 01:50:01 (11932): Status Report: Elapsed Time: '6000.056808'
2025-05-16 01:50:01 (11932): Status Report: CPU Time: '16930.734375'
2025-05-16 03:30:01 (11932): Status Report: Elapsed Time: '12000.056808'
2025-05-16 03:30:01 (11932): Status Report: CPU Time: '46318.625000'
2025-05-16 05:10:02 (11932): Status Report: Elapsed Time: '18000.056808'
2025-05-16 05:10:02 (11932): Status Report: CPU Time: '75449.250000'
2025-05-16 06:50:01 (11932): Status Report: Elapsed Time: '24000.056808'
2025-05-16 06:50:01 (11932): Status Report: CPU Time: '106121.093750'
2025-05-16 08:30:00 (11932): Status Report: Elapsed Time: '30000.056808'
2025-05-16 08:30:00 (11932): Status Report: CPU Time: '138745.218750'
2025-05-16 10:05:25 (11932): Guest Log:  *** Job finished ***
2025-05-16 10:05:25 (11932): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:10,556 | INFO     | [payload] control thread has finished
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:11,405 | INFO     | [job] queue monitor thread has finished
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:14,180 | INFO     | [data] queue_monitor thread has finished
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:15,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113213425472)>', '<ExcThread(monitor, started 140112495109888)>']
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:15,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:15,363 | INFO     | [monitor] control thread has ended
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:20,377 | INFO     | all workflow threads have been joined
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:20,378 | INFO     | end of generic workflow (traces error code: 0)
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:20,380 | INFO     | traces error code: 0
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:20,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:21,334 [wrapper] ==== pilot stdout END ====
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:21,395 [wrapper] ==== wrapper stdout RESUME ====
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:21,444 [wrapper] pilotpid: 6169
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:21,492 [wrapper] Pilot exit status: 0
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:22,307 [wrapper] pandaids: 6649926960
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:22,522 [wrapper] cleanup supervisor_pilot  5020 6170
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:22,572 [wrapper] Test setup, not cleaning
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:22,618 [wrapper] apfmon messages muted
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:22,660 [wrapper] ==== wrapper stdout END ====
2025-05-16 10:05:25 (11932): Guest Log: 2025-05-16 14:05:22,701 [wrapper] ==== wrapper stderr END ====
2025-05-16 10:05:25 (11932): Guest Log:  *** Error codes and diagnostics ***
2025-05-16 10:05:25 (11932): Guest Log:     "exeErrorCode": 0,
2025-05-16 10:05:25 (11932): Guest Log:     "exeErrorDiag": "",
2025-05-16 10:05:25 (11932): Guest Log:     "pilotErrorCode": 0,
2025-05-16 10:05:25 (11932): Guest Log:     "pilotErrorDiag": "",
2025-05-16 10:05:25 (11932): Guest Log:  *** Listing of results directory ***
2025-05-16 10:05:25 (11932): Guest Log: total 203844
2025-05-16 10:05:25 (11932): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 14 12:37 pilot3.tar.gz
2025-05-16 10:05:25 (11932): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 14 13:30 queuedata.json
2025-05-16 10:05:25 (11932): Guest Log: -rwx------. 1 atlas atlas     37140 May 14 13:31 runpilot2-wrapper.sh
2025-05-16 10:05:25 (11932): Guest Log: -rwxr-xr-x. 1 atlas atlas      6563 May 16 04:17 init_data.xml
2025-05-16 10:05:25 (11932): Guest Log: -rwxr-xr-x. 1 atlas atlas    508876 May 16 04:17 input.tar.gz
2025-05-16 10:05:25 (11932): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May 16 04:17 start_atlas.sh
2025-05-16 10:05:25 (11932): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 16 04:17 EVNT.44638096._000129.pool.root.1 -> /data/./ATLAS.root_0
2025-05-16 10:05:25 (11932): Guest Log: -rw-r--r--. 1 atlas atlas      2538 May 16 04:18 pandaJob.out
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas       424 May 16 04:19 setup.sh.local
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas    990956 May 16 04:23 agis_schedconf.cvmfs.json
2025-05-16 10:05:25 (11932): Guest Log: drwx------. 4 atlas atlas      4096 May 16 04:24 pilot3
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas 199986917 May 16 14:01 HITS.44638099._003209.pool.root.1
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas      1038 May 16 14:02 memory_monitor_summary.json
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas   1596741 May 16 14:02 agis_ddmendpoints.agis.ALL.json
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas    499999 May 16 14:02 log.44638099._003209.job.log.tgz.1
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas        95 May 16 14:04 pilot_heartbeat.json
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas      7715 May 16 14:05 heartbeat.json
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas      4536 May 16 14:05 pilotlog.txt
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas   1988877 May 16 14:05 log.44638099._003209.job.log.1
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas       357 May 16 14:05 output.list
2025-05-16 10:05:25 (11932): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 16 14:05 runtime_log
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas   2508800 May 16 14:05 result.tar.gz
2025-05-16 10:05:25 (11932): Guest Log: -rw-r--r--. 1 atlas atlas     10968 May 16 14:05 runtime_log.err
2025-05-16 10:05:25 (11932): Guest Log: -rw-------. 1 atlas atlas       673 May 16 14:05 bPuNDmgNRZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkjFKDm0S4wQn.diag
2025-05-16 10:05:26 (11932): Guest Log: Looking for outputfile HITS.44638099._003209.pool.root.1
2025-05-16 10:05:26 (11932): Guest Log: HITS file was successfully produced
2025-05-16 10:05:26 (11932): Guest Log: -rw-------. 1 atlas atlas 199986917 May 16 14:01 /home/atlas/RunAtlas/HITS.44638099._003209.pool.root.1
2025-05-16 10:05:31 (11932): Guest Log: Successfully finished the ATLAS job!
2025-05-16 10:05:31 (11932): Guest Log: Copying the results back to the shared directory!
2025-05-16 10:05:32 (11932): Guest Log:  *** Contents of shared directory: ***
2025-05-16 10:05:33 (11932): Guest Log: total 418380
2025-05-16 10:05:33 (11932): Guest Log: -rwxrwxrwx. 1 root root 225382227 May 16 04:09 ATLAS.root_0
2025-05-16 10:05:33 (11932): Guest Log: -rwxrwxrwx. 1 root root 199986917 May 16 14:05 HITS.pool.root.1
2025-05-16 10:05:33 (11932): Guest Log: -rwxrwxrwx. 1 root root      6563 May 16 04:09 init_data.xml
2025-05-16 10:05:33 (11932): Guest Log: -rwxrwxrwx. 1 root root    508876 May 15 20:20 input.tar.gz
2025-05-16 10:05:33 (11932): Guest Log: -rwxrwxrwx. 1 root root   2508800 May 16 14:05 result.tar.gz
2025-05-16 10:05:33 (11932): Guest Log: -rwxrwxrwx. 1 root root     17569 May 15 20:20 start_atlas.sh
2025-05-16 10:05:33 (11932): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-16 10:05:34 (11932): VM Completion File Detected.
2025-05-16 10:05:34 (11932): Powering off VM.
2025-05-16 10:05:35 (11932): Successfully stopped VM.
2025-05-16 10:05:35 (11932): Deregistering VM. (boinc_b72d3e394d23c096, slot#11)
2025-05-16 10:05:35 (11932): Removing network bandwidth throttle group from VM.
2025-05-16 10:05:36 (11932): Removing VM from VirtualBox.
10:05:41 (11932): called boinc_finish(0)

</stderr_txt>
]]>

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