Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-16 03:28:35 (8752): Detected: vboxwrapper 26206
2025-05-16 03:28:35 (8752): Detected: BOINC client v8.0.2
2025-05-16 03:28:35 (8752): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-05-16 03:28:36 (8752): Successfully copied 'init_data.xml' to the shared directory.
2025-05-16 03:28:36 (8752): Create VM. (boinc_c14d6be24d124d4e, slot#0)
2025-05-16 03:28:37 (8752): Setting Memory Size for VM. (4800MB)
2025-05-16 03:28:37 (8752): Setting CPU Count for VM. (8)
2025-05-16 03:28:37 (8752): Setting Chipset Options for VM.
2025-05-16 03:28:37 (8752): Setting Graphics Controller Options for VM.
2025-05-16 03:28:38 (8752): Setting Boot Options for VM.
2025-05-16 03:28:38 (8752): Setting Network Configuration for NAT.
2025-05-16 03:28:38 (8752): Enabling VM Network Access.
2025-05-16 03:28:39 (8752): Disabling USB Support for VM.
2025-05-16 03:28:39 (8752): Disabling COM Port Support for VM.
2025-05-16 03:28:39 (8752): Disabling LPT Port Support for VM.
2025-05-16 03:28:39 (8752): Disabling Audio Support for VM.
2025-05-16 03:28:40 (8752): Disabling Clipboard Support for VM.
2025-05-16 03:28:40 (8752): Disabling Drag and Drop Support for VM.
2025-05-16 03:28:40 (8752): Adding storage controller(s) to VM.
2025-05-16 03:28:40 (8752): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-16 03:28:41 (8752): Adding VirtualBox Guest Additions to VM.
2025-05-16 03:28:41 (8752): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-16 03:28:41 (8752): forwarding host port 56701 to guest port 80
2025-05-16 03:28:42 (8752): Enabling remote desktop for VM.
2025-05-16 03:28:42 (8752): Required extension pack not installed, remote desktop not enabled.
2025-05-16 03:28:42 (8752): Enabling shared directory for VM.
2025-05-16 03:28:43 (8752): Starting VM using VBoxManage interface. (boinc_c14d6be24d124d4e, slot#0)
2025-05-16 03:28:52 (8752): Successfully started VM. (PID = '13092')
2025-05-16 03:28:52 (8752): Reporting VM Process ID to BOINC.
2025-05-16 03:28:52 (8752): Guest Log: BIOS: VirtualBox 7.1.4
2025-05-16 03:28:52 (8752): Guest Log: CPUID EDX: 0x178bfbff
2025-05-16 03:28:52 (8752): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-16 03:28:52 (8752): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-16 03:28:52 (8752): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-16 03:28:52 (8752): Detected: Web Application Enabled (http://localhost:56701)
2025-05-16 03:28:52 (8752): Preference change detected
2025-05-16 03:28:52 (8752): Setting CPU throttle for VM. (75%)
2025-05-16 03:28:53 (8752): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-16 03:28:54 (8752): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-16 03:28:54 (8752): Guest Log: BIOS: Booting from Hard Disk...
2025-05-16 03:29:05 (8752): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-16 03:29:05 (8752): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-16 03:29:05 (8752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-16 03:30:27 (8752): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-16 03:30:27 (8752): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-16 03:35:24 (8752): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-16 03:35:24 (8752): Guest Log: 00:00:00.003232 main     Log opened 2025-05-16T03:35:22.949813000Z
2025-05-16 03:35:24 (8752): Guest Log: 00:00:00.004119 main     OS Product: Linux
2025-05-16 03:35:24 (8752): Guest Log: 00:00:00.004242 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-16 03:35:24 (8752): Guest Log: 00:00:00.004331 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-16 03:35:24 (8752): Guest Log: 00:00:00.004489 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-16 03:35:24 (8752): Guest Log: 00:00:00.004490 main     Process ID: 1424
2025-05-16 03:35:24 (8752): Guest Log: 00:00:00.004491 main     Package type: LINUX_64BITS_GENERIC
2025-05-16 03:35:24 (8752): Guest Log: 00:00:00.007220 main     5.2.32 r132073 started. Verbose level = 0
2025-05-16 03:35:26 (8752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-16 03:35:26 (8752): Guest Log: [INFO] Mounting shared directory
2025-05-16 03:35:28 (8752): Guest Log: [INFO] Checking for init_data.xml
2025-05-16 03:35:34 (8752): Guest Log: 00:00:10.108788 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 557 045 000ns (GuestNow=1 747 380 934 600 770 000 ns GuestLast=1 747 366 523 043 725 000 ns fSetTimeLastLoop=true )
2025-05-16 03:36:08 (8752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-16 03:36:08 (8752): Guest Log: [INFO] Detected branch: prod
2025-05-16 03:36:10 (8752): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-16 03:36:10 (8752): Guest Log: Copying input files
2025-05-16 03:36:18 (8752): Guest Log: Copied input files into RunAtlas.
2025-05-16 03:36:20 (8752): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-16 03:36:20 (8752): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-16 03:36:20 (8752): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-16 03:36:20 (8752): Guest Log: Further information can be found at the LHC@home message board.
2025-05-16 03:37:05 (8752): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-16 03:37:11 (8752): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-16 03:37:11 (8752): Guest Log: 2.6.3.0 1723 1 32024 146056 3 1 3117515 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-16 03:37:20 (8752): Guest Log: copied the webapp to /var/www
2025-05-16 03:37:21 (8752): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-16 03:37:21 (8752): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-16 03:37:28 (8752): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-16 03:37:30 (8752): Guest Log:  *** Starting ATLAS job. (PandaID=6650550613 taskID=44638099) ***
2025-05-16 05:08:53 (8752): Status Report: Elapsed Time: '6000.000000'
2025-05-16 05:08:53 (8752): Status Report: CPU Time: '12739.421875'
2025-05-16 06:48:52 (8752): Status Report: Elapsed Time: '12000.000000'
2025-05-16 06:48:52 (8752): Status Report: CPU Time: '43702.125000'
2025-05-16 08:28:50 (8752): Status Report: Elapsed Time: '18000.000000'
2025-05-16 08:28:50 (8752): Status Report: CPU Time: '76354.437500'
2025-05-16 10:08:49 (8752): Status Report: Elapsed Time: '24000.000000'
2025-05-16 10:08:49 (8752): Status Report: CPU Time: '109834.031250'
2025-05-16 11:48:51 (8752): Status Report: Elapsed Time: '30000.000000'
2025-05-16 11:48:51 (8752): Status Report: CPU Time: '142143.875000'
2025-05-16 11:51:56 (8752): Guest Log:  *** Job finished ***
2025-05-16 11:51:56 (8752): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:28,775 | INFO     | [payload] execute_payloads thread has finished
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:29,649 | INFO     | [job] queue monitor thread has finished
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:32,138 | INFO     | [data] queue_monitor thread has finished
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:33,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732923987776)>', '<ExcThread(monitor, started 139732247893760)>']
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:33,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:33,972 | INFO     | [monitor] control thread has ended
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:38,229 | INFO     | all workflow threads have been joined
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:38,230 | INFO     | end of generic workflow (traces error code: 0)
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:38,232 | INFO     | traces error code: 0
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:38,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:39,092 [wrapper] ==== pilot stdout END ====
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:39,133 [wrapper] ==== wrapper stdout RESUME ====
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:39,180 [wrapper] pilotpid: 6181
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:39,224 [wrapper] Pilot exit status: 0
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:39,614 [wrapper] pandaids: 6650550613
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:39,828 [wrapper] cleanup supervisor_pilot 31161 6182
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:39,894 [wrapper] Test setup, not cleaning
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:39,943 [wrapper] apfmon messages muted
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:39,993 [wrapper] ==== wrapper stdout END ====
2025-05-16 11:51:56 (8752): Guest Log: 2025-05-16 15:51:40,040 [wrapper] ==== wrapper stderr END ====
2025-05-16 11:51:56 (8752): Guest Log:  *** Error codes and diagnostics ***
2025-05-16 11:51:56 (8752): Guest Log:     "exeErrorCode": 0,
2025-05-16 11:51:56 (8752): Guest Log:     "exeErrorDiag": "",
2025-05-16 11:51:56 (8752): Guest Log:     "pilotErrorCode": 0,
2025-05-16 11:51:56 (8752): Guest Log:     "pilotErrorDiag": "",
2025-05-16 11:51:56 (8752): Guest Log:  *** Listing of results directory ***
2025-05-16 11:51:56 (8752): Guest Log: total 198328
2025-05-16 11:51:56 (8752): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 15 17:14 pilot3.tar.gz
2025-05-16 11:51:56 (8752): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 15 17:25 queuedata.json
2025-05-16 11:51:56 (8752): Guest Log: -rwx------. 1 atlas atlas     37140 May 15 17:26 runpilot2-wrapper.sh
2025-05-16 11:51:56 (8752): Guest Log: -rwxr-xr-x. 1 atlas atlas      6562 May 16 07:36 init_data.xml
2025-05-16 11:51:56 (8752): Guest Log: -rwxr-xr-x. 1 atlas atlas    508874 May 16 07:36 input.tar.gz
2025-05-16 11:51:56 (8752): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May 16 07:36 start_atlas.sh
2025-05-16 11:51:56 (8752): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 16 07:36 EVNT.44638096._001657.pool.root.1 -> /data/./ATLAS.root_0
2025-05-16 11:51:56 (8752): Guest Log: -rw-r--r--. 1 atlas atlas      2539 May 16 07:37 pandaJob.out
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas       424 May 16 07:38 setup.sh.local
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas    989800 May 16 07:46 agis_schedconf.cvmfs.json
2025-05-16 11:51:56 (8752): Guest Log: drwx------. 4 atlas atlas      4096 May 16 07:46 pilot3
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas 194810063 May 16 15:47 HITS.44638099._027145.pool.root.1
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas      1051 May 16 15:48 memory_monitor_summary.json
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas   1596741 May 16 15:49 agis_ddmendpoints.agis.ALL.json
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas    468144 May 16 15:49 log.44638099._027145.job.log.tgz.1
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas        96 May 16 15:50 pilot_heartbeat.json
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas      7720 May 16 15:51 heartbeat.json
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas      4413 May 16 15:51 pilotlog.txt
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas   1783581 May 16 15:51 log.44638099._027145.job.log.1
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas       357 May 16 15:51 output.list
2025-05-16 11:51:56 (8752): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 16 15:51 runtime_log
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas   2273280 May 16 15:51 result.tar.gz
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas       673 May 16 15:51 uswNDm0WrZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYtJKDm0DLOwm.diag
2025-05-16 11:51:56 (8752): Guest Log: -rw-r--r--. 1 atlas atlas     10968 May 16 15:51 runtime_log.err
2025-05-16 11:51:56 (8752): Guest Log: Looking for outputfile HITS.44638099._027145.pool.root.1
2025-05-16 11:51:56 (8752): Guest Log: HITS file was successfully produced
2025-05-16 11:51:56 (8752): Guest Log: -rw-------. 1 atlas atlas 194810063 May 16 15:47 /home/atlas/RunAtlas/HITS.44638099._027145.pool.root.1
2025-05-16 11:52:01 (8752): Guest Log: Successfully finished the ATLAS job!
2025-05-16 11:52:01 (8752): Guest Log: Copying the results back to the shared directory!
2025-05-16 11:52:02 (8752): Guest Log:  *** Contents of shared directory: ***
2025-05-16 11:52:03 (8752): Guest Log: total 409332
2025-05-16 11:52:03 (8752): Guest Log: -rwxrwxrwx. 1 root root 221527829 May 16 07:28 ATLAS.root_0
2025-05-16 11:52:03 (8752): Guest Log: -rwxrwxrwx. 1 root root 194810063 May 16  2025 HITS.pool.root.1
2025-05-16 11:52:03 (8752): Guest Log: -rwxrwxrwx. 1 root root      6562 May 16 07:28 init_data.xml
2025-05-16 11:52:03 (8752): Guest Log: -rwxrwxrwx. 1 root root    508874 May 15 20:20 input.tar.gz
2025-05-16 11:52:03 (8752): Guest Log: -rwxrwxrwx. 1 root root   2273280 May 16  2025 result.tar.gz
2025-05-16 11:52:03 (8752): Guest Log: -rwxrwxrwx. 1 root root     17569 May 15 20:20 start_atlas.sh
2025-05-16 11:52:03 (8752): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-16 11:52:04 (8752): VM Completion File Detected.
2025-05-16 11:52:04 (8752): Powering off VM.
2025-05-16 11:52:06 (8752): Successfully stopped VM.
2025-05-16 11:52:06 (8752): Deregistering VM. (boinc_c14d6be24d124d4e, slot#0)
2025-05-16 11:52:06 (8752): Removing network bandwidth throttle group from VM.
2025-05-16 11:52:06 (8752): Removing VM from VirtualBox.
11:52:11 (8752): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN