Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:29:22 (1095353): wrapper (7.7.26015): starting
20:29:22 (1095353): wrapper: running run_atlas (--nthreads 2)
[2025-05-15 20:29:22] Arguments: --nthreads 2
[2025-05-15 20:29:22] Threads: 2
[2025-05-15 20:29:22] Checking for CVMFS
[2025-05-15 20:29:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-15 20:29:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-15 20:29:22] Running cvmfs_config stat atlas.cern.ch
[2025-05-15 20:29:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-15 20:29:23] 2.12.7.0 1875577 2150 54700 146051 3 132 4035800 6144000 6417 130560 0 7881060 99.998 619971 8146 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-05-15 20:29:23] CVMFS is ok
[2025-05-15 20:29:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-15 20:29:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-05-15 20:29:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-05-15 20:29:23] Further information can be found at the LHC@home message board.
[2025-05-15 20:29:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-15 20:29:23] Checking for apptainer binary...
[2025-05-15 20:29:23] apptainer is not installed, using version from CVMFS
[2025-05-15 20:29:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-15 20:29:23] desktop-b650ef
[2025-05-15 20:29:23] apptainer works
[2025-05-15 20:29:23] Set ATHENA_PROC_NUMBER=2
[2025-05-15 20:29:23] Set ATHENA_CORE_NUMBER=2
[2025-05-15 20:29:23] Starting ATLAS job with PandaID=6650260265
[2025-05-15 20:29:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-15 23:36:42]  *** The last 200 lines of the pilot log: ***
[2025-05-15 23:36:42] 2025-05-16 06:36:27,701 | INFO     | mean y: 2192272.690217391
[2025-05-15 23:36:42] 2025-05-16 06:36:27,701 | INFO     | -- intersect: -36908180985.06569
[2025-05-15 23:36:42] 2025-05-16 06:36:27,701 | INFO     | intersect: -36908180985.06569
[2025-05-15 23:36:42] 2025-05-16 06:36:27,701 | INFO     | chi2: 5.0092491903144705
[2025-05-15 23:36:42] 2025-05-16 06:36:27,701 | INFO     | sum of square deviations: 1778377530.0
[2025-05-15 23:36:42] 2025-05-16 06:36:27,702 | INFO     | sum of deviations: 50983636031.99999
[2025-05-15 23:36:42] 2025-05-16 06:36:27,702 | INFO     | mean x: 1747371626.0
[2025-05-15 23:36:42] 2025-05-16 06:36:27,702 | INFO     | mean y: 2202156.039106145
[2025-05-15 23:36:42] 2025-05-16 06:36:27,702 | INFO     | -- intersect: -50092537284.70721
[2025-05-15 23:36:42] 2025-05-16 06:36:27,702 | INFO     | intersect: -50092537284.70721
[2025-05-15 23:36:42] 2025-05-16 06:36:27,702 | INFO     | chi2: 4.2093371584592525
[2025-05-15 23:36:42] 2025-05-16 06:36:27,702 | INFO     | current chi2=4.2093371584592525 (change=15.968701125946605 %)
[2025-05-15 23:36:42] 2025-05-16 06:36:27,702 | INFO     | right removable region: 178
[2025-05-15 23:36:42] 2025-05-16 06:36:27,702 | INFO     | sum of square deviations: 1778377530.0
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | sum of deviations: 1064810083.0000114
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | mean x: 1747371931.0
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | mean y: 2231668.055865922
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | -- intersect: -1044013698.573345
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | intersect: -1044013698.573345
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | chi2: 2.4865544287305616
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | current chi2=2.4865544287305616 (change=50.36073602530321 %)
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | sum of square deviations: 1633472487.5
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | sum of deviations: -25196236446.5
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | mean x: 1747372083.5
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | mean y: 2259309.304597701
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | -- intersect: 26955391677.79779
[2025-05-15 23:36:42] 2025-05-16 06:36:27,703 | INFO     | intersect: 26955391677.79779
[2025-05-15 23:36:42] 2025-05-16 06:36:27,704 | INFO     | chi2: 1.438082773202104
[2025-05-15 23:36:42] 2025-05-16 06:36:27,704 | INFO     | current chi2=1.438082773202104 (change=42.16564268266288 %)
[2025-05-15 23:36:42] 2025-05-16 06:36:27,704 | INFO     | sum of square deviations: 1496660620.0
[2025-05-15 23:36:42] 2025-05-16 06:36:27,704 | INFO     | sum of deviations: -35240851558.00001
[2025-05-15 23:36:42] 2025-05-16 06:36:27,704 | INFO     | mean x: 1747372236.0
[2025-05-15 23:36:42] 2025-05-16 06:36:27,704 | INFO     | mean y: 2270271.0414201184
[2025-05-15 23:36:42] 2025-05-16 06:36:27,704 | INFO     | -- intersect: 41146458046.52158
[2025-05-15 23:36:42] 2025-05-16 06:36:27,704 | INFO     | intersect: 41146458046.52158
[2025-05-15 23:36:42] 2025-05-16 06:36:27,704 | INFO     | chi2: 1.002407732933367
[2025-05-15 23:36:42] 2025-05-16 06:36:27,704 | INFO     | current chi2=1.002407732933367 (change=30.295546848019196 %)
[2025-05-15 23:36:42] 2025-05-16 06:36:27,704 | INFO     | sum of square deviations: 1367709365.0
[2025-05-15 23:36:42] 2025-05-16 06:36:27,705 | INFO     | sum of deviations: -29646186446.500004
[2025-05-15 23:36:42] 2025-05-16 06:36:27,705 | INFO     | mean x: 1747372388.5
[2025-05-15 23:36:42] 2025-05-16 06:36:27,705 | INFO     | mean y: 2263650.8597560977
[2025-05-15 23:36:42] 2025-05-16 06:36:27,705 | INFO     | -- intersect: 37877947583.85457
[2025-05-15 23:36:42] 2025-05-16 06:36:27,705 | INFO     | intersect: 37877947583.85457
[2025-05-15 23:36:42] 2025-05-16 06:36:27,705 | INFO     | chi2: 0.9880185190998751
[2025-05-15 23:36:42] 2025-05-16 06:36:27,705 | INFO     | current chi2=0.9880185190998751 (change=1.435465166592872 %)
[2025-05-15 23:36:42] 2025-05-16 06:36:27,705 | INFO     | left removable region: 40
[2025-05-15 23:36:42] 2025-05-16 06:36:27,705 | INFO     | sum of square deviations: 814878534.5
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | sum of deviations: -43958155.49999972
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | mean x: 1747372815.5
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | mean y: 2249753.804347826
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | -- intersect: 96510778.83840622
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | intersect: 96510778.83840622
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | chi2: 0.006475933813913754
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | -- intersect: 96510778.83840622
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | current memory leak: -0.05 B/s (using 138 data points, chi2=0.01)
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | ..............................
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | . Timing measurements:
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | . get job = 0 s
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | . initial setup = 2 s
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | . payload setup = 5 s
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | . stage-in = 0 s
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | . payload execution = 11181 s
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | . stage-out = 3 s
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | . log creation = 0 s
[2025-05-15 23:36:42] 2025-05-16 06:36:27,706 | INFO     | ..............................
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | 
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | job summary report
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | --------------------------------------------------
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | PanDA job id: 6650260265
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | task id: 44638099
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | errors: (none)
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | pilot state: finished 
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | transexitcode: 0
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | exeerrorcode: 0
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | exeerrordiag: 
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | exitcode: 0
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | exitmsg: OK
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | cpuconsumptiontime: 20797 s
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | nevents: 400
[2025-05-15 23:36:42] 2025-05-16 06:36:28,009 | INFO     | neventsw: 0
[2025-05-15 23:36:42] 2025-05-16 06:36:28,010 | INFO     | pid: 1105905
[2025-05-15 23:36:42] 2025-05-16 06:36:28,010 | INFO     | pgrp: 1105905
[2025-05-15 23:36:42] 2025-05-16 06:36:28,010 | INFO     | corecount: 2
[2025-05-15 23:36:42] 2025-05-16 06:36:28,010 | INFO     | event service: False
[2025-05-15 23:36:42] 2025-05-16 06:36:28,010 | INFO     | sizes: {0: 2393719, 3: 2393925, 11: 2393953, 11190: 2422982, 11193: 2431939, 11194: 2431995, 11200: 2432293}
[2025-05-15 23:36:42] 2025-05-16 06:36:28,010 | INFO     | --------------------------------------------------
[2025-05-15 23:36:42] 2025-05-16 06:36:28,010 | INFO     | 
[2025-05-15 23:36:42] 2025-05-16 06:36:28,010 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/17
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-15 23:36:42] 2025-05-16 06:36:28,043 | INFO     | job 6650260265 has completed (purged errors)
[2025-05-15 23:36:42] 2025-05-16 06:36:28,044 | INFO     | overall cleanup function is called
[2025-05-15 23:36:42] 2025-05-16 06:36:29,050 | INFO     | --- collectZombieJob: --- 10, [1105905]
[2025-05-15 23:36:42] 2025-05-16 06:36:29,050 | INFO     | zombie collector waiting for pid 1105905
[2025-05-15 23:36:42] 2025-05-16 06:36:29,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-15 23:36:42] 2025-05-16 06:36:29,050 | INFO     | collected zombie processes
[2025-05-15 23:36:42] 2025-05-16 06:36:29,050 | INFO     | will attempt to kill all subprocesses of pid=1105905
[2025-05-15 23:36:42] 2025-05-16 06:36:29,151 | INFO     | process IDs to be killed: [1105905] (in reverse order)
[2025-05-15 23:36:42] 2025-05-16 06:36:29,297 | WARNING  | found no corresponding commands to process id(s)
[2025-05-15 23:36:42] 2025-05-16 06:36:29,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-15 23:36:42] 2025-05-16 06:36:29,300 | INFO     | did not find any defunct processes belonging to 1105905
[2025-05-15 23:36:42] 2025-05-16 06:36:29,303 | INFO     | did not find any defunct processes belonging to 1105905
[2025-05-15 23:36:42] 2025-05-16 06:36:29,303 | INFO     | ready for new job
[2025-05-15 23:36:42] 2025-05-16 06:36:29,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-15 23:36:42] 2025-05-16 06:36:29,304 | INFO     | **************************************
[2025-05-15 23:36:42] 2025-05-16 06:36:29,304 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-15 23:36:42] 2025-05-16 06:36:29,304 | INFO     | **************************************
[2025-05-15 23:36:42] 2025-05-16 06:36:29,304 | INFO     | 
[2025-05-15 23:36:42] 2025-05-16 06:36:29,305 | INFO     | architecture information:
[2025-05-15 23:36:42] 2025-05-16 06:36:29,305 | INFO     | executing command: cat /etc/os-release
[2025-05-15 23:36:42] 2025-05-16 06:36:29,316 | INFO     | cat /etc/os-release:
[2025-05-15 23:36:42] NAME="CentOS Linux"
[2025-05-15 23:36:42] VERSION="7 (Core)"
[2025-05-15 23:36:42] ID="centos"
[2025-05-15 23:36:42] ID_LIKE="rhel fedora"
[2025-05-15 23:36:42] VERSION_ID="7"
[2025-05-15 23:36:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-15 23:36:42] ANSI_COLOR="0;31"
[2025-05-15 23:36:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-15 23:36:42] HOME_URL="https://www.centos.org/"
[2025-05-15 23:36:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-15 23:36:42] 
[2025-05-15 23:36:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-15 23:36:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-15 23:36:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-15 23:36:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-15 23:36:42] 
[2025-05-15 23:36:42] 2025-05-16 06:36:29,316 | INFO     | **************************************
[2025-05-15 23:36:42] 2025-05-16 06:36:29,572 | INFO     | PID=1099142 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-15 23:36:42] 2025-05-16 06:36:29,573 | INFO     | .. there are 8 such processes running
[2025-05-15 23:36:42] 2025-05-16 06:36:29,819 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/17
[2025-05-15 23:36:42] 2025-05-16 06:36:29,830 | INFO     | sufficient remaining disk space (415168987136 B)
[2025-05-15 23:36:42] 2025-05-16 06:36:29,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-15 23:36:42] 2025-05-16 06:36:29,830 | INFO     | current server update state: UPDATING_FINAL
[2025-05-15 23:36:42] 2025-05-16 06:36:29,830 | INFO     | update_server=False
[2025-05-15 23:36:42] 2025-05-16 06:36:29,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-15 23:36:42] 2025-05-16 06:36:29,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-15 23:36:42] 2025-05-16 06:36:29,831 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-15 23:36:42] 2025-05-16 06:36:29,831 | INFO     | found 0 job(s) in 20 queues
[2025-05-15 23:36:42] 2025-05-16 06:36:29,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-15 23:36:42] 2025-05-16 06:36:29,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-15 23:36:42] 2025-05-16 06:36:30,287 | INFO     | all job control threads have been joined
[2025-05-15 23:36:42] 2025-05-16 06:36:30,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-15 23:36:42] 2025-05-16 06:36:30,562 | INFO     | aborting loop
[2025-05-15 23:36:42] 2025-05-16 06:36:30,759 | INFO     | all payload control threads have been joined
[2025-05-15 23:36:42] 2025-05-16 06:36:30,835 | INFO     | [job] retrieve thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:30,886 | INFO     | all data control threads have been joined
[2025-05-15 23:36:42] 2025-05-16 06:36:31,076 | INFO     | [data] copytool_in thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:31,292 | INFO     | [job] control thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:31,465 | INFO     | [payload] execute_payloads thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:31,569 | INFO     | [job] job monitor thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:31,657 | INFO     | [payload] failed_post thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:31,764 | INFO     | [payload] control thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:31,836 | INFO     | [data] copytool_out thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:31,892 | INFO     | [data] control thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:32,010 | INFO     | [job] validate thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:32,118 | INFO     | [job] create_data_payload thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:32,264 | INFO     | [payload] validate_pre thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:32,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:32,301 | INFO     | [payload] validate_post thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:32,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-15 23:36:42] 2025-05-16 06:36:32,979 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-15 23:36:42] 2025-05-16 06:36:33,763 | INFO     | [job] queue monitor thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:36,984 | INFO     | [data] queue_monitor thread has finished
[2025-05-15 23:36:42] 2025-05-16 06:36:37,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133503211349824)>', '<ExcThread(monitor, started 133502540441344)>']
[2025-05-15 23:36:42] 2025-05-16 06:36:37,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-15 23:36:42] 2025-05-16 06:36:37,871 | INFO     | [monitor] control thread has ended
[2025-05-15 23:36:42] 2025-05-16 06:36:42,149 | INFO     | all workflow threads have been joined
[2025-05-15 23:36:42] 2025-05-16 06:36:42,149 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-15 23:36:42] 2025-05-16 06:36:42,149 | INFO     | traces error code: 0
[2025-05-15 23:36:42] 2025-05-16 06:36:42,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-15 23:36:42] 2025-05-16 06:36:42,210 [wrapper] ==== pilot stdout END ====
[2025-05-15 23:36:42] 2025-05-16 06:36:42,211 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-15 23:36:42] 2025-05-16 06:36:42,213 [wrapper] pilotpid: 1099142
[2025-05-15 23:36:42] 2025-05-16 06:36:42,215 [wrapper] Pilot exit status: 0
[2025-05-15 23:36:42] 2025-05-16 06:36:42,232 [wrapper] pandaids: 6650260265
[2025-05-15 23:36:42] 2025-05-16 06:36:42,268 [wrapper] cleanup supervisor_pilot 1365262 1099143
[2025-05-15 23:36:42] 2025-05-16 06:36:42,275 [wrapper] Test setup, not cleaning
[2025-05-15 23:36:42] 2025-05-16 06:36:42,277 [wrapper] apfmon messages muted
[2025-05-15 23:36:42] 2025-05-16 06:36:42,283 [wrapper] ==== wrapper stdout END ====
[2025-05-15 23:36:42] 2025-05-16 06:36:42,288 [wrapper] ==== wrapper stderr END ====
[2025-05-15 23:36:42]  *** Error codes and diagnostics ***
[2025-05-15 23:36:42]     "exeErrorCode": 0,
[2025-05-15 23:36:42]     "exeErrorDiag": "",
[2025-05-15 23:36:42]     "pilotErrorCode": 0,
[2025-05-15 23:36:42]     "pilotErrorDiag": "",
[2025-05-15 23:36:42]  *** Listing of results directory ***
[2025-05-15 23:36:42] total 405204
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc    495897 May 15 01:57 pilot3.tar.gz
[2025-05-15 23:36:42] -rwx------ 1 boinc boinc     37140 May 15 02:06 runpilot2-wrapper.sh
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc      5111 May 15 02:06 queuedata.json
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc       100 May 15 20:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-15 23:36:42] -rwxr-xr-x 1 boinc boinc      7986 May 15 20:29 run_atlas
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc       105 May 15 20:29 job.xml
[2025-05-15 23:36:42] -rw-r--r-- 2 boinc boinc 219687000 May 15 20:29 EVNT.44638096._001434.pool.root.1
[2025-05-15 23:36:42] -rw-r--r-- 2 boinc boinc     17569 May 15 20:29 start_atlas.sh
[2025-05-15 23:36:42] drwxrwx--x 2 boinc boinc      4096 May 15 20:29 shared
[2025-05-15 23:36:42] -rw-r--r-- 2 boinc boinc    508872 May 15 20:29 input.tar.gz
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc     10337 May 15 20:29 init_data.xml
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc         0 May 15 20:29 boinc_setup_complete
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc         0 May 15 20:29 boinc_lockfile
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc      2539 May 15 20:29 pandaJob.out
[2025-05-15 23:36:42] -rw------- 1 boinc boinc       424 May 15 20:29 setup.sh.local
[2025-05-15 23:36:42] -rw------- 1 boinc boinc    995903 May 15 20:29 agis_schedconf.cvmfs.json
[2025-05-15 23:36:42] drwx------ 4 boinc boinc      4096 May 15 20:29 pilot3
[2025-05-15 23:36:42] -rw------- 1 boinc boinc        95 May 15 23:35 pilot_heartbeat.json
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc       530 May 15 23:35 boinc_task_state.xml
[2025-05-15 23:36:42] -rw------- 1 boinc boinc 188654484 May 15 23:35 HITS.44638099._021534.pool.root.1
[2025-05-15 23:36:42] -rw------- 1 boinc boinc      1036 May 15 23:36 memory_monitor_summary.json
[2025-05-15 23:36:42] -rw------- 1 boinc boinc   1596741 May 15 23:36 agis_ddmendpoints.agis.ALL.json
[2025-05-15 23:36:42] -rw------- 1 boinc boinc    280763 May 15 23:36 log.44638099._021534.job.log.tgz.1
[2025-05-15 23:36:42] -rw------- 1 boinc boinc      7668 May 15 23:36 heartbeat.json
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc      8192 May 15 23:36 boinc_mmap_file
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc        28 May 15 23:36 wrapper_checkpoint.txt
[2025-05-15 23:36:42] -rw------- 1 boinc boinc      4879 May 15 23:36 pilotlog.txt
[2025-05-15 23:36:42] -rw------- 1 boinc boinc   1086134 May 15 23:36 log.44638099._021534.job.log.1
[2025-05-15 23:36:42] -rw------- 1 boinc boinc       357 May 15 23:36 output.list
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc       620 May 15 23:36 runtime_log
[2025-05-15 23:36:42] -rw------- 1 boinc boinc   1382400 May 15 23:36 result.tar.gz
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc     11177 May 15 23:36 runtime_log.err
[2025-05-15 23:36:42] -rw------- 1 boinc boinc       659 May 15 23:36 pEHODmgijZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJuIKDmdW7hZm.diag
[2025-05-15 23:36:42] -rw-r--r-- 1 boinc boinc     20997 May 15 23:36 stderr.txt
[2025-05-15 23:36:42] HITS file was successfully produced:
[2025-05-15 23:36:42] -rw------- 1 boinc boinc 188654484 May 15 23:35 shared/HITS.pool.root.1
[2025-05-15 23:36:42]  *** Contents of shared directory: ***
[2025-05-15 23:36:42] total 400656
[2025-05-15 23:36:42] -rw-r--r-- 2 boinc boinc 219687000 May 15 20:29 ATLAS.root_0
[2025-05-15 23:36:42] -rw-r--r-- 2 boinc boinc     17569 May 15 20:29 start_atlas.sh
[2025-05-15 23:36:42] -rw-r--r-- 2 boinc boinc    508872 May 15 20:29 input.tar.gz
[2025-05-15 23:36:42] -rw------- 1 boinc boinc 188654484 May 15 23:35 HITS.pool.root.1
[2025-05-15 23:36:42] -rw------- 1 boinc boinc   1382400 May 15 23:36 result.tar.gz
23:36:43 (1095353): run_atlas exited; CPU time 20894.360316
23:36:43 (1095353): called boinc_finish(0)

</stderr_txt>
]]>

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