Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:38:14 (17769): wrapper (7.7.26015): starting
13:38:14 (17769): wrapper: running run_atlas (--nthreads 12)
[2025-05-15 13:38:14] Arguments: --nthreads 12
[2025-05-15 13:38:14] Threads: 12
[2025-05-15 13:38:14] Checking for CVMFS
[2025-05-15 13:38:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-15 13:38:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-15 13:38:14] Running cvmfs_config stat atlas.cern.ch
[2025-05-15 13:38:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-15 13:38:14] 2.11.2.0 2981 7146 75076 146036 3 56 18009710 20275201 1 130560 0 1986717 99.980 1378032 52699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-15 13:38:14] CVMFS is ok
[2025-05-15 13:38:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-15 13:38:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-15 13:38:14] Further information can be found at the LHC@home message board.
[2025-05-15 13:38:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-15 13:38:14] Checking for apptainer binary...
[2025-05-15 13:38:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-15 13:38:14] Running /usr/bin/apptainer --version
[2025-05-15 13:38:14] apptainer version 1.3.2-1.el7
[2025-05-15 13:38:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-15 13:38:16] c-205-30.aglt2.org
[2025-05-15 13:38:16] apptainer works
[2025-05-15 13:38:16] Set ATHENA_PROC_NUMBER=12
[2025-05-15 13:38:16] Set ATHENA_CORE_NUMBER=12
[2025-05-15 13:38:16] Starting ATLAS job with PandaID=6650201207
[2025-05-15 13:38:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-15 15:19:06]  *** The last 200 lines of the pilot log: ***
[2025-05-15 15:19:06]  mtime=0
[2025-05-15 15:19:06]  protocol_id=None
[2025-05-15 15:19:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-15 15:19:06]  replicas=None
[2025-05-15 15:19:06]  scope=mc23_13p6TeV
[2025-05-15 15:19:06]  status=None
[2025-05-15 15:19:06]  status_code=0
[2025-05-15 15:19:06]  storage_token=
[2025-05-15 15:19:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6650201207/log.44638099._021247.job.log.tgz.1
[2025-05-15 15:19:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/16/log.44638099._021247.job.log.tgz.1
[2025-05-15 15:19:06]  workdir=None
[2025-05-15 15:19:06] ]
[2025-05-15 15:19:06] 2025-05-15 19:18:40,460 | INFO     | transferring file log.44638099._021247.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6650201207/log.44638099._021247.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-15 15:19:06] 2025-05-15 19:18:40,461 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6650201207/log.44638099._021247.job.log.tgz.1 /tmp/boinchome/slots/0/log.44638099._021247.job
[2025-05-15 15:19:06] 2025-05-15 19:18:40,483 | INFO     | adding to output.list: log.44638099._021247.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/16/log.44638099._021247.job.log.tg
[2025-05-15 15:19:06] 2025-05-15 19:18:40,484 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-15 15:19:06] 2025-05-15 19:18:40,485 | INFO     | summary of transferred files:
[2025-05-15 15:19:06] 2025-05-15 19:18:40,485 | INFO     |  -- lfn=log.44638099._021247.job.log.tgz.1, status_code=0, status=transferred
[2025-05-15 15:19:06] 2025-05-15 19:18:40,485 | INFO     | stage-out finished correctly
[2025-05-15 15:19:06] 2025-05-15 19:18:41,354 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-15 15:19:06] 2025-05-15 19:18:41,645 | WARNING  | process 27824 can no longer be monitored (due to stat problems) - aborting
[2025-05-15 15:19:06] 2025-05-15 19:18:41,645 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6650201207/memory_monitor_summary.json (trf name=prmon)
[2025-05-15 15:19:06] 2025-05-15 19:18:41,732 | INFO     | number of running child processes to parent process 27824: 1
[2025-05-15 15:19:06] 2025-05-15 19:18:41,733 | INFO     | maximum number of monitored processes: 6
[2025-05-15 15:19:06] 2025-05-15 19:18:42,643 | INFO     | job 6650201207 has state=finished
[2025-05-15 15:19:06] 2025-05-15 19:18:42,643 | INFO     | preparing for final server update for job 6650201207 in state='finished'
[2025-05-15 15:19:06] 2025-05-15 19:18:42,644 | INFO     | this job has now completed (state=finished)
[2025-05-15 15:19:06] 2025-05-15 19:18:42,644 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-15 15:19:06] 2025-05-15 19:18:42,644 | INFO     | log transfer has been attempted: DONE
[2025-05-15 15:19:06] 2025-05-15 19:18:42,644 | INFO     | job 6650201207 has finished - writing final server update
[2025-05-15 15:19:06] 2025-05-15 19:18:42,645 | INFO     | total number of processed events: 400 (read)
[2025-05-15 15:19:06] 2025-05-15 19:18:42,646 | INFO     | executing command: lscpu
[2025-05-15 15:19:06] 2025-05-15 19:18:42,674 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-15 15:19:06] 2025-05-15 19:18:43,220 | INFO     | PID=21363 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-15 15:19:06] 2025-05-15 19:18:44,235 | INFO     | monitor loop #447: job 0:6650201207 is in state 'finished'
[2025-05-15 15:19:06] 2025-05-15 19:18:44,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 15:19:06] 2025-05-15 19:18:46,738 | INFO     | monitor loop #448: job 0:6650201207 is in state 'finished'
[2025-05-15 15:19:06] 2025-05-15 19:18:46,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 15:19:06] 2025-05-15 19:18:47,399 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-15 15:19:06] 2025-05-15 19:18:47,399 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6650201207/memory_monitor_summary.json (trf name=prmon)
[2025-05-15 15:19:06] 2025-05-15 19:18:47,400 | INFO     | extracted standard info from prmon json
[2025-05-15 15:19:06] 2025-05-15 19:18:47,400 | INFO     | extracted standard memory fields from prmon json
[2025-05-15 15:19:06] 2025-05-15 19:18:47,400 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-15 15:19:06] 2025-05-15 19:18:47,400 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-15 15:19:06] 2025-05-15 19:18:47,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-15 15:19:06] 2025-05-15 19:18:47,402 | INFO     | fitting pss+swap vs Time
[2025-05-15 15:19:06] 2025-05-15 19:18:47,403 | INFO     | sum of square deviations: 233641590.0
[2025-05-15 15:19:06] 2025-05-15 19:18:47,403 | INFO     | sum of deviations: 26700054898.000008
[2025-05-15 15:19:06] 2025-05-15 19:18:47,403 | INFO     | mean x: 1747333787.0
[2025-05-15 15:19:06] 2025-05-15 19:18:47,403 | INFO     | mean y: 2607905.7252747254
[2025-05-15 15:19:06] 2025-05-15 19:18:47,403 | INFO     | -- intersect: -199678912999.99298
[2025-05-15 15:19:06] 2025-05-15 19:18:47,404 | INFO     | intersect: -199678912999.99298
[2025-05-15 15:19:06] 2025-05-15 19:18:47,404 | INFO     | chi2: 2.0533044496215886
[2025-05-15 15:19:06] 2025-05-15 19:18:47,404 | INFO     | -- intersect: -199678912999.99298
[2025-05-15 15:19:06] 2025-05-15 19:18:47,404 | INFO     | current memory leak: 114.28 B/s (using 91 data points, chi2=2.05)
[2025-05-15 15:19:06] 2025-05-15 19:18:47,404 | INFO     | ..............................
[2025-05-15 15:19:06] 2025-05-15 19:18:47,404 | INFO     | . Timing measurements:
[2025-05-15 15:19:06] 2025-05-15 19:18:47,405 | INFO     | . get job = 0 s
[2025-05-15 15:19:06] 2025-05-15 19:18:47,405 | INFO     | . initial setup = 2 s
[2025-05-15 15:19:06] 2025-05-15 19:18:47,405 | INFO     | . payload setup = 7 s
[2025-05-15 15:19:06] 2025-05-15 19:18:47,405 | INFO     | . stage-in = 0 s
[2025-05-15 15:19:06] 2025-05-15 19:18:47,405 | INFO     | . payload execution = 5982 s
[2025-05-15 15:19:06] 2025-05-15 19:18:47,405 | INFO     | . stage-out = 0 s
[2025-05-15 15:19:06] 2025-05-15 19:18:47,405 | INFO     | . log creation = 0 s
[2025-05-15 15:19:06] 2025-05-15 19:18:47,405 | INFO     | ..............................
[2025-05-15 15:19:06] 2025-05-15 19:18:47,487 | INFO     | 
[2025-05-15 15:19:06] 2025-05-15 19:18:47,487 | INFO     | job summary report
[2025-05-15 15:19:06] 2025-05-15 19:18:47,487 | INFO     | --------------------------------------------------
[2025-05-15 15:19:06] 2025-05-15 19:18:47,488 | INFO     | PanDA job id: 6650201207
[2025-05-15 15:19:06] 2025-05-15 19:18:47,488 | INFO     | task id: 44638099
[2025-05-15 15:19:06] 2025-05-15 19:18:47,488 | INFO     | errors: (none)
[2025-05-15 15:19:06] 2025-05-15 19:18:47,488 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-15 15:19:06] 2025-05-15 19:18:47,488 | INFO     | pilot state: finished 
[2025-05-15 15:19:06] 2025-05-15 19:18:47,488 | INFO     | transexitcode: 0
[2025-05-15 15:19:06] 2025-05-15 19:18:47,488 | INFO     | exeerrorcode: 0
[2025-05-15 15:19:06] 2025-05-15 19:18:47,488 | INFO     | exeerrordiag: 
[2025-05-15 15:19:06] 2025-05-15 19:18:47,488 | INFO     | exitcode: 0
[2025-05-15 15:19:06] 2025-05-15 19:18:47,489 | INFO     | exitmsg: OK
[2025-05-15 15:19:06] 2025-05-15 19:18:47,489 | INFO     | cpuconsumptiontime: 57924 s
[2025-05-15 15:19:06] 2025-05-15 19:18:47,489 | INFO     | nevents: 400
[2025-05-15 15:19:06] 2025-05-15 19:18:47,489 | INFO     | neventsw: 0
[2025-05-15 15:19:06] 2025-05-15 19:18:47,489 | INFO     | pid: 27824
[2025-05-15 15:19:06] 2025-05-15 19:18:47,489 | INFO     | pgrp: 27824
[2025-05-15 15:19:06] 2025-05-15 19:18:47,489 | INFO     | corecount: 12
[2025-05-15 15:19:06] 2025-05-15 19:18:47,489 | INFO     | event service: False
[2025-05-15 15:19:06] 2025-05-15 19:18:47,489 | INFO     | sizes: {0: 2393597, 1: 2393739, 5: 2393945, 11: 2394001, 5993: 2420578, 5996: 2429519, 5997: 2429703, 6003: 2429873}
[2025-05-15 15:19:06] 2025-05-15 19:18:47,489 | INFO     | --------------------------------------------------
[2025-05-15 15:19:06] 2025-05-15 19:18:47,490 | INFO     | 
[2025-05-15 15:19:06] 2025-05-15 19:18:47,490 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-15 15:19:06] 2025-05-15 19:18:47,513 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,514 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,514 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,514 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-15 15:19:06] 2025-05-15 19:18:47,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,517 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-15 15:19:06] 2025-05-15 19:18:47,517 | INFO     | job 6650201207 has completed (purged errors)
[2025-05-15 15:19:06] 2025-05-15 19:18:47,517 | INFO     | overall cleanup function is called
[2025-05-15 15:19:06] 2025-05-15 19:18:48,525 | INFO     | --- collectZombieJob: --- 10, [27824]
[2025-05-15 15:19:06] 2025-05-15 19:18:48,526 | INFO     | zombie collector waiting for pid 27824
[2025-05-15 15:19:06] 2025-05-15 19:18:48,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-15 15:19:06] 2025-05-15 19:18:48,526 | INFO     | collected zombie processes
[2025-05-15 15:19:06] 2025-05-15 19:18:48,526 | INFO     | will attempt to kill all subprocesses of pid=27824
[2025-05-15 15:19:06] 2025-05-15 19:18:48,620 | INFO     | process IDs to be killed: [27824] (in reverse order)
[2025-05-15 15:19:06] 2025-05-15 19:18:48,673 | WARNING  | found no corresponding commands to process id(s)
[2025-05-15 15:19:06] 2025-05-15 19:18:48,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-15 15:19:06] 2025-05-15 19:18:48,677 | INFO     | did not find any defunct processes belonging to 27824
[2025-05-15 15:19:06] 2025-05-15 19:18:48,680 | INFO     | did not find any defunct processes belonging to 27824
[2025-05-15 15:19:06] 2025-05-15 19:18:48,680 | INFO     | ready for new job
[2025-05-15 15:19:06] 2025-05-15 19:18:48,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-15 15:19:06] 2025-05-15 19:18:48,682 | INFO     | **************************************
[2025-05-15 15:19:06] 2025-05-15 19:18:48,682 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-15 15:19:06] 2025-05-15 19:18:48,682 | INFO     | **************************************
[2025-05-15 15:19:06] 2025-05-15 19:18:48,682 | INFO     | 
[2025-05-15 15:19:06] 2025-05-15 19:18:48,683 | INFO     | architecture information:
[2025-05-15 15:19:06] 2025-05-15 19:18:48,683 | INFO     | executing command: cat /etc/os-release
[2025-05-15 15:19:06] 2025-05-15 19:18:48,699 | INFO     | cat /etc/os-release:
[2025-05-15 15:19:06] NAME="CentOS Linux"
[2025-05-15 15:19:06] VERSION="7 (Core)"
[2025-05-15 15:19:06] ID="centos"
[2025-05-15 15:19:06] ID_LIKE="rhel fedora"
[2025-05-15 15:19:06] VERSION_ID="7"
[2025-05-15 15:19:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-15 15:19:06] ANSI_COLOR="0;31"
[2025-05-15 15:19:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-15 15:19:06] HOME_URL="https://www.centos.org/"
[2025-05-15 15:19:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-15 15:19:06] 
[2025-05-15 15:19:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-15 15:19:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-15 15:19:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-15 15:19:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-15 15:19:06] 
[2025-05-15 15:19:06] 2025-05-15 19:18:48,700 | INFO     | **************************************
[2025-05-15 15:19:06] 2025-05-15 19:18:49,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-15 15:19:06] 2025-05-15 19:18:49,221 | INFO     | sufficient remaining disk space (29393682432 B)
[2025-05-15 15:19:06] 2025-05-15 19:18:49,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-15 15:19:06] 2025-05-15 19:18:49,221 | INFO     | current server update state: UPDATING_FINAL
[2025-05-15 15:19:06] 2025-05-15 19:18:49,221 | INFO     | update_server=False
[2025-05-15 15:19:06] 2025-05-15 19:18:49,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-15 15:19:06] 2025-05-15 19:18:49,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-15 15:19:06] 2025-05-15 19:18:49,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-15 15:19:06] 2025-05-15 19:18:49,236 | INFO     | found 0 job(s) in 20 queues
[2025-05-15 15:19:06] 2025-05-15 19:18:49,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-15 15:19:06] 2025-05-15 19:18:49,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-15 15:19:06] 2025-05-15 19:18:49,241 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-15 15:19:06] 2025-05-15 19:18:49,241 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-15 15:19:06] 2025-05-15 19:18:49,241 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-15 15:19:06] 2025-05-15 19:18:49,241 | INFO     | will abort loop
[2025-05-15 15:19:06] 2025-05-15 19:18:50,213 | INFO     | all data control threads have been joined
[2025-05-15 15:19:06] 2025-05-15 19:18:50,227 | INFO     | [job] retrieve thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:50,228 | INFO     | [job] queue monitor thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:50,247 | INFO     | [job] job monitor thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:50,457 | INFO     | all payload control threads have been joined
[2025-05-15 15:19:06] 2025-05-15 19:18:50,497 | INFO     | [payload] validate_post thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:50,518 | INFO     | all job control threads have been joined
[2025-05-15 15:19:06] 2025-05-15 19:18:50,705 | INFO     | [payload] execute_payloads thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:50,994 | INFO     | [job] validate thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:51,218 | INFO     | [data] control thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:51,219 | INFO     | [job] create_data_payload thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:51,228 | INFO     | [data] copytool_out thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:51,230 | INFO     | [payload] validate_pre thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:51,458 | INFO     | [payload] control thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:51,523 | INFO     | [job] control thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:51,532 | INFO     | [payload] failed_post thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:51,549 | INFO     | [data] copytool_in thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:51,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-15 15:19:06] 2025-05-15 19:18:55,959 | INFO     | [data] queue_monitor thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:18:59,712 | INFO     | job.realtimelogging is not enabled
[2025-05-15 15:19:06] 2025-05-15 19:19:00,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-15 15:19:06] 2025-05-15 19:19:01,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685750761280)>', '<ExcThread(monitor, started 139684818712320)>']
[2025-05-15 15:19:06] 2025-05-15 19:19:01,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-15 15:19:06] 2025-05-15 19:19:01,291 | INFO     | [monitor] control thread has ended
[2025-05-15 15:19:06] 2025-05-15 19:19:06,223 | INFO     | all workflow threads have been joined
[2025-05-15 15:19:06] 2025-05-15 19:19:06,223 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-15 15:19:06] 2025-05-15 19:19:06,224 | INFO     | traces error code: 0
[2025-05-15 15:19:06] 2025-05-15 19:19:06,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-15 15:19:06] 2025-05-15 19:19:06,307 [wrapper] ==== pilot stdout END ====
[2025-05-15 15:19:06] 2025-05-15 19:19:06,311 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-15 15:19:06] 2025-05-15 19:19:06,314 [wrapper] pilotpid: 21363
[2025-05-15 15:19:06] 2025-05-15 19:19:06,318 [wrapper] Pilot exit status: 0
[2025-05-15 15:19:06] 2025-05-15 19:19:06,334 [wrapper] pandaids: 6650201207
[2025-05-15 15:19:06] 2025-05-15 19:19:06,370 [wrapper] cleanup supervisor_pilot 15532 21364
[2025-05-15 15:19:06] 2025-05-15 19:19:06,374 [wrapper] Test setup, not cleaning
[2025-05-15 15:19:06] 2025-05-15 19:19:06,379 [wrapper] apfmon messages muted
[2025-05-15 15:19:06] 2025-05-15 19:19:06,383 [wrapper] ==== wrapper stdout END ====
[2025-05-15 15:19:06] 2025-05-15 19:19:06,386 [wrapper] ==== wrapper stderr END ====
[2025-05-15 15:19:06]  *** Error codes and diagnostics ***
[2025-05-15 15:19:06]     "exeErrorCode": 0,
[2025-05-15 15:19:06]     "exeErrorDiag": "",
[2025-05-15 15:19:06]     "pilotErrorCode": 0,
[2025-05-15 15:19:06]     "pilotErrorDiag": "",
[2025-05-15 15:19:06]  *** Listing of results directory ***
[2025-05-15 15:19:06] total 414720
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas      5111 May 15 04:44 queuedata.json
[2025-05-15 15:19:06] -rwx------ 1 boincer umatlas     37140 May 15 04:45 runpilot2-wrapper.sh
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas    495897 May 15 04:45 pilot3.tar.gz
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas       100 May 15 13:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-15 15:19:06] -rwxr-xr-x 1 boincer umatlas      7986 May 15 13:38 run_atlas
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas       105 May 15 13:38 job.xml
[2025-05-15 15:19:06] -rw-r--r-- 2 boincer umatlas 221633535 May 15 13:38 EVNT.44638096._001423.pool.root.1
[2025-05-15 15:19:06] -rw-r--r-- 2 boincer umatlas     17569 May 15 13:38 start_atlas.sh
[2025-05-15 15:19:06] drwxrwx--x 2 boincer umatlas      4096 May 15 13:38 shared
[2025-05-15 15:19:06] -rw-r--r-- 2 boincer umatlas    508872 May 15 13:38 input.tar.gz
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas         0 May 15 13:38 boinc_lockfile
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas      2539 May 15 13:38 pandaJob.out
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas       424 May 15 13:38 setup.sh.local
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas    995903 May 15 13:38 agis_schedconf.cvmfs.json
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas   1596741 May 15 13:38 agis_ddmendpoints.agis.ALL.json
[2025-05-15 15:19:06] drwx------ 4 boincer umatlas      4096 May 15 13:38 pilot3
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas 197328572 May 15 15:18 HITS.44638099._021247.pool.root.1
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas       530 May 15 15:18 boinc_task_state.xml
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas      1048 May 15 15:18 memory_monitor_summary.json
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas      5868 May 15 15:18 init_data.xml
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas    374155 May 15 15:18 log.44638099._021247.job.log.tgz.1
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas        95 May 15 15:18 pilot_heartbeat.json
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas      7750 May 15 15:18 heartbeat.json
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas        27 May 15 15:19 wrapper_checkpoint.txt
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas      8192 May 15 15:19 boinc_mmap_file
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas      4611 May 15 15:19 pilotlog.txt
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas    560959 May 15 15:19 log.44638099._021247.job.log.1
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas       357 May 15 15:19 output.list
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas       620 May 15 15:19 runtime_log
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas    952320 May 15 15:19 result.tar.gz
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas     11015 May 15 15:19 runtime_log.err
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas       658 May 15 15:19 bfiNDmGOjZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6qIKDmXVWvim.diag
[2025-05-15 15:19:06] -rw-r--r-- 1 boincer umatlas     21701 May 15 15:19 stderr.txt
[2025-05-15 15:19:06] HITS file was successfully produced:
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas 197328572 May 15 15:18 shared/HITS.pool.root.1
[2025-05-15 15:19:06]  *** Contents of shared directory: ***
[2025-05-15 15:19:06] total 410600
[2025-05-15 15:19:06] -rw-r--r-- 2 boincer umatlas 221633535 May 15 13:38 ATLAS.root_0
[2025-05-15 15:19:06] -rw-r--r-- 2 boincer umatlas     17569 May 15 13:38 start_atlas.sh
[2025-05-15 15:19:06] -rw-r--r-- 2 boincer umatlas    508872 May 15 13:38 input.tar.gz
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas 197328572 May 15 15:18 HITS.pool.root.1
[2025-05-15 15:19:06] -rw------- 1 boincer umatlas    952320 May 15 15:19 result.tar.gz
15:19:08 (17769): run_atlas exited; CPU time 57948.737038
15:19:08 (17769): called boinc_finish(0)

</stderr_txt>
]]>

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