Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:58:37 (2626543): wrapper (7.7.26015): starting
07:58:37 (2626543): wrapper: running run_atlas (--nthreads 8)
[2025-05-15 07:58:37] Arguments: --nthreads 8
[2025-05-15 07:58:37] Threads: 8
[2025-05-15 07:58:37] Checking for CVMFS
[2025-05-15 07:58:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-15 07:58:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-15 07:58:38] Running cvmfs_config stat atlas.cern.ch
[2025-05-15 07:58:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-15 07:58:39] 2.12.6.0 8999 8476 290756 146026 2 223 29191867 32935936 25233 16776704 0 28378889 99.504 46305242 30684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-15 07:58:39] CVMFS is ok
[2025-05-15 07:58:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-15 07:58:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-15 07:58:39] Further information can be found at the LHC@home message board.
[2025-05-15 07:58:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-15 07:58:39] Checking for apptainer binary...
[2025-05-15 07:58:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-15 07:58:39] Running /usr/bin/apptainer --version
[2025-05-15 07:58:40] apptainer version 1.4.0-1.el9
[2025-05-15 07:58:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-15 07:58:41] c7-11-16.aglt2.org
[2025-05-15 07:58:41] apptainer works
[2025-05-15 07:58:41] Set ATHENA_PROC_NUMBER=8
[2025-05-15 07:58:41] Set ATHENA_CORE_NUMBER=8
[2025-05-15 07:58:41] Starting ATLAS job with PandaID=6650260402
[2025-05-15 07:58:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-15 19:07:00]  *** The last 200 lines of the pilot log: ***
[2025-05-15 19:07:00] 2025-05-15 23:06:45,286 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-15 19:07:00] 2025-05-15 23:06:45,287 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6650260402/memory_monitor_summary.json (trf name=prmon)
[2025-05-15 19:07:00] 2025-05-15 23:06:45,287 | INFO     | extracted standard info from prmon json
[2025-05-15 19:07:00] 2025-05-15 23:06:45,287 | INFO     | extracted standard memory fields from prmon json
[2025-05-15 19:07:00] 2025-05-15 23:06:45,287 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-15 19:07:00] 2025-05-15 23:06:45,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-15 19:07:00] 2025-05-15 23:06:45,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-15 19:07:00] 2025-05-15 23:06:45,363 | INFO     | fitting pss+swap vs Time
[2025-05-15 19:07:00] 2025-05-15 23:06:45,364 | INFO     | sum of square deviations: 86738543385.60753
[2025-05-15 19:07:00] 2025-05-15 23:06:45,384 | INFO     | sum of deviations: 1035066519264.4727
[2025-05-15 19:07:00] 2025-05-15 23:06:45,388 | INFO     | mean x: 1747330453.3088684
[2025-05-15 19:07:00] 2025-05-15 23:06:45,388 | INFO     | mean y: 2172243.383792049
[2025-05-15 19:07:00] 2025-05-15 23:06:45,388 | INFO     | -- intersect: -20849033918.458717
[2025-05-15 19:07:00] 2025-05-15 23:06:45,388 | INFO     | intersect: -20849033918.458717
[2025-05-15 19:07:00] 2025-05-15 23:06:45,389 | INFO     | chi2: 13.677869841226942
[2025-05-15 19:07:00] 2025-05-15 23:06:45,390 | INFO     | sum of square deviations: 84764463059.81184
[2025-05-15 19:07:00] 2025-05-15 23:06:45,405 | INFO     | sum of deviations: 1063987488146.4469
[2025-05-15 19:07:00] 2025-05-15 23:06:45,406 | INFO     | mean x: 1747330300.8151002
[2025-05-15 19:07:00] 2025-05-15 23:06:45,406 | INFO     | mean y: 2174458.5870570107
[2025-05-15 19:07:00] 2025-05-15 23:06:45,406 | INFO     | -- intersect: -21930809136.372803
[2025-05-15 19:07:00] 2025-05-15 23:06:45,406 | INFO     | intersect: -21930809136.372803
[2025-05-15 19:07:00] 2025-05-15 23:06:45,406 | INFO     | chi2: 12.917882795014801
[2025-05-15 19:07:00] 2025-05-15 23:06:45,407 | INFO     | current chi2=12.917882795014801 (change=5.556326058326986 %)
[2025-05-15 19:07:00] 2025-05-15 23:06:45,407 | INFO     | right removable region: 648
[2025-05-15 19:07:00] 2025-05-15 23:06:45,407 | INFO     | sum of square deviations: 84764140369.81195
[2025-05-15 19:07:00] 2025-05-15 23:06:45,423 | INFO     | sum of deviations: 845277424632.9646
[2025-05-15 19:07:00] 2025-05-15 23:06:45,423 | INFO     | mean x: 1747330605.8151002
[2025-05-15 19:07:00] 2025-05-15 23:06:45,423 | INFO     | mean y: 2186896.3913713405
[2025-05-15 19:07:00] 2025-05-15 23:06:45,423 | INFO     | -- intersect: -17422388024.346687
[2025-05-15 19:07:00] 2025-05-15 23:06:45,423 | INFO     | intersect: -17422388024.346687
[2025-05-15 19:07:00] 2025-05-15 23:06:45,424 | INFO     | chi2: 9.497515025565521
[2025-05-15 19:07:00] 2025-05-15 23:06:45,428 | INFO     | current chi2=9.497515025565521 (change=30.562908290450814 %)
[2025-05-15 19:07:00] 2025-05-15 23:06:45,429 | INFO     | sum of square deviations: 82819923966.46425
[2025-05-15 19:07:00] 2025-05-15 23:06:45,444 | INFO     | sum of deviations: 691888708426.3931
[2025-05-15 19:07:00] 2025-05-15 23:06:45,445 | INFO     | mean x: 1747330758.3214285
[2025-05-15 19:07:00] 2025-05-15 23:06:45,445 | INFO     | mean y: 2198925.5729813664
[2025-05-15 19:07:00] 2025-05-15 23:06:45,445 | INFO     | -- intersect: -14595235648.965618
[2025-05-15 19:07:00] 2025-05-15 23:06:45,445 | INFO     | intersect: -14595235648.965618
[2025-05-15 19:07:00] 2025-05-15 23:06:45,445 | INFO     | chi2: 6.933829218343743
[2025-05-15 19:07:00] 2025-05-15 23:06:45,446 | INFO     | current chi2=6.933829218343743 (change=26.9932271791181 %)
[2025-05-15 19:07:00] 2025-05-15 23:06:45,446 | INFO     | sum of square deviations: 80905700653.71855
[2025-05-15 19:07:00] 2025-05-15 23:06:45,459 | INFO     | sum of deviations: 571358313355.1875
[2025-05-15 19:07:00] 2025-05-15 23:06:45,459 | INFO     | mean x: 1747330910.826291
[2025-05-15 19:07:00] 2025-05-15 23:06:45,459 | INFO     | mean y: 2208526.5602503913
[2025-05-15 19:07:00] 2025-05-15 23:06:45,459 | INFO     | -- intersect: -12337491074.535873
[2025-05-15 19:07:00] 2025-05-15 23:06:45,459 | INFO     | intersect: -12337491074.535873
[2025-05-15 19:07:00] 2025-05-15 23:06:45,465 | INFO     | chi2: 5.41775806241628
[2025-05-15 19:07:00] 2025-05-15 23:06:45,465 | INFO     | current chi2=5.41775806241628 (change=21.864847087906806 %)
[2025-05-15 19:07:00] 2025-05-15 23:06:45,465 | INFO     | left removable region: 30
[2025-05-15 19:07:00] 2025-05-15 23:06:45,466 | INFO     | sum of square deviations: 73188150312.50487
[2025-05-15 19:07:00] 2025-05-15 23:06:45,479 | INFO     | sum of deviations: 280002984872.6409
[2025-05-15 19:07:00] 2025-05-15 23:06:45,479 | INFO     | mean x: 1747331185.3495145
[2025-05-15 19:07:00] 2025-05-15 23:06:45,479 | INFO     | mean y: 2237797.802588997
[2025-05-15 19:07:00] 2025-05-15 23:06:45,479 | INFO     | -- intersect: -6682696107.069161
[2025-05-15 19:07:00] 2025-05-15 23:06:45,479 | INFO     | intersect: -6682696107.069161
[2025-05-15 19:07:00] 2025-05-15 23:06:45,480 | INFO     | chi2: 0.8025903336739433
[2025-05-15 19:07:00] 2025-05-15 23:06:45,480 | INFO     | -- intersect: -6682696107.069161
[2025-05-15 19:07:00] 2025-05-15 23:06:45,480 | INFO     | current memory leak: 3.83 B/s (using 618 data points, chi2=0.80)
[2025-05-15 19:07:00] 2025-05-15 23:06:45,481 | INFO     | ..............................
[2025-05-15 19:07:00] 2025-05-15 23:06:45,481 | INFO     | . Timing measurements:
[2025-05-15 19:07:00] 2025-05-15 23:06:45,481 | INFO     | . get job = 0 s
[2025-05-15 19:07:00] 2025-05-15 23:06:45,481 | INFO     | . initial setup = 5 s
[2025-05-15 19:07:00] 2025-05-15 23:06:45,481 | INFO     | . payload setup = 56 s
[2025-05-15 19:07:00] 2025-05-15 23:06:45,481 | INFO     | . stage-in = 0 s
[2025-05-15 19:07:00] 2025-05-15 23:06:45,481 | INFO     | . payload execution = 39881 s
[2025-05-15 19:07:00] 2025-05-15 23:06:45,481 | INFO     | . stage-out = 2 s
[2025-05-15 19:07:00] 2025-05-15 23:06:45,482 | INFO     | . log creation = 0 s
[2025-05-15 19:07:00] 2025-05-15 23:06:45,482 | INFO     | ..............................
[2025-05-15 19:07:00] 2025-05-15 23:06:45,655 | INFO     | 
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | job summary report
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | --------------------------------------------------
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | PanDA job id: 6650260402
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | task id: 44638099
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | errors: (none)
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | pilot state: finished 
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | transexitcode: 0
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | exeerrorcode: 0
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | exeerrordiag: 
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | exitcode: 0
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | exitmsg: OK
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | cpuconsumptiontime: 43300 s
[2025-05-15 19:07:00] 2025-05-15 23:06:45,656 | INFO     | nevents: 400
[2025-05-15 19:07:00] 2025-05-15 23:06:45,657 | INFO     | neventsw: 0
[2025-05-15 19:07:00] 2025-05-15 23:06:45,657 | INFO     | pid: 2643873
[2025-05-15 19:07:00] 2025-05-15 23:06:45,657 | INFO     | pgrp: 2643873
[2025-05-15 19:07:00] 2025-05-15 23:06:45,657 | INFO     | corecount: 8
[2025-05-15 19:07:00] 2025-05-15 23:06:45,657 | INFO     | event service: False
[2025-05-15 19:07:00] 2025-05-15 23:06:45,657 | INFO     | sizes: {0: 2393539, 1: 2393738, 12: 2393738, 23: 2393766, 28: 2394000, 34: 2394028, 39942: 2435624, 39945: 2444621, 39962: 2444735}
[2025-05-15 19:07:00] 2025-05-15 23:06:45,657 | INFO     | --------------------------------------------------
[2025-05-15 19:07:00] 2025-05-15 23:06:45,657 | INFO     | 
[2025-05-15 19:07:00] 2025-05-15 23:06:45,657 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-15 19:07:00] 2025-05-15 23:06:45,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,715 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-15 19:07:00] 2025-05-15 23:06:45,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,715 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-15 19:07:00] 2025-05-15 23:06:45,715 | INFO     | job 6650260402 has completed (purged errors)
[2025-05-15 19:07:00] 2025-05-15 23:06:45,715 | INFO     | overall cleanup function is called
[2025-05-15 19:07:00] 2025-05-15 23:06:46,729 | INFO     | --- collectZombieJob: --- 10, [2643873]
[2025-05-15 19:07:00] 2025-05-15 23:06:46,729 | INFO     | zombie collector waiting for pid 2643873
[2025-05-15 19:07:00] 2025-05-15 23:06:46,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-15 19:07:00] 2025-05-15 23:06:46,729 | INFO     | collected zombie processes
[2025-05-15 19:07:00] 2025-05-15 23:06:46,729 | INFO     | will attempt to kill all subprocesses of pid=2643873
[2025-05-15 19:07:00] 2025-05-15 23:06:47,304 | INFO     | process IDs to be killed: [2643873] (in reverse order)
[2025-05-15 19:07:00] 2025-05-15 23:06:47,502 | WARNING  | found no corresponding commands to process id(s)
[2025-05-15 19:07:00] 2025-05-15 23:06:47,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-15 19:07:00] 2025-05-15 23:06:47,533 | INFO     | did not find any defunct processes belonging to 2643873
[2025-05-15 19:07:00] 2025-05-15 23:06:47,552 | INFO     | did not find any defunct processes belonging to 2643873
[2025-05-15 19:07:00] 2025-05-15 23:06:47,552 | INFO     | ready for new job
[2025-05-15 19:07:00] 2025-05-15 23:06:47,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-15 19:07:00] 2025-05-15 23:06:47,555 | INFO     | **************************************
[2025-05-15 19:07:00] 2025-05-15 23:06:47,555 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-15 19:07:00] 2025-05-15 23:06:47,555 | INFO     | **************************************
[2025-05-15 19:07:00] 2025-05-15 23:06:47,555 | INFO     | 
[2025-05-15 19:07:00] 2025-05-15 23:06:47,592 | INFO     | architecture information:
[2025-05-15 19:07:00] 2025-05-15 23:06:47,598 | INFO     | executing command: cat /etc/os-release
[2025-05-15 19:07:00] 2025-05-15 23:06:47,663 | INFO     | cat /etc/os-release:
[2025-05-15 19:07:00] NAME="CentOS Linux"
[2025-05-15 19:07:00] VERSION="7 (Core)"
[2025-05-15 19:07:00] ID="centos"
[2025-05-15 19:07:00] ID_LIKE="rhel fedora"
[2025-05-15 19:07:00] VERSION_ID="7"
[2025-05-15 19:07:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-15 19:07:00] ANSI_COLOR="0;31"
[2025-05-15 19:07:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-15 19:07:00] HOME_URL="https://www.centos.org/"
[2025-05-15 19:07:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-15 19:07:00] 
[2025-05-15 19:07:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-15 19:07:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-15 19:07:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-15 19:07:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-15 19:07:00] 
[2025-05-15 19:07:00] 2025-05-15 23:06:47,665 | INFO     | **************************************
[2025-05-15 19:07:00] 2025-05-15 23:06:48,168 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-15 19:07:00] 2025-05-15 23:06:48,318 | INFO     | sufficient remaining disk space (94928633856 B)
[2025-05-15 19:07:00] 2025-05-15 23:06:48,319 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-15 19:07:00] 2025-05-15 23:06:48,319 | INFO     | current server update state: UPDATING_FINAL
[2025-05-15 19:07:00] 2025-05-15 23:06:48,319 | INFO     | update_server=False
[2025-05-15 19:07:00] 2025-05-15 23:06:48,319 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-15 19:07:00] 2025-05-15 23:06:48,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-15 19:07:00] 2025-05-15 23:06:48,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-15 19:07:00] 2025-05-15 23:06:48,326 | INFO     | aborting loop
[2025-05-15 19:07:00] 2025-05-15 23:06:48,820 | INFO     | found 0 job(s) in 20 queues
[2025-05-15 19:07:00] 2025-05-15 23:06:48,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-15 19:07:00] 2025-05-15 23:06:48,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-15 19:07:00] 2025-05-15 23:06:48,841 | INFO     | all data control threads have been joined
[2025-05-15 19:07:00] 2025-05-15 23:06:48,990 | INFO     | all job control threads have been joined
[2025-05-15 19:07:00] 2025-05-15 23:06:49,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-15 19:07:00] 2025-05-15 23:06:49,325 | INFO     | [job] retrieve thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:49,332 | INFO     | [job] job monitor thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:49,552 | INFO     | all payload control threads have been joined
[2025-05-15 19:07:00] 2025-05-15 23:06:49,735 | INFO     | [payload] execute_payloads thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:49,827 | INFO     | [job] validate thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:49,848 | INFO     | [data] control thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:49,851 | INFO     | [data] copytool_in thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:49,883 | INFO     | [payload] validate_post thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:49,996 | INFO     | [job] control thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:50,099 | INFO     | [job] create_data_payload thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:50,136 | INFO     | [payload] validate_pre thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:50,240 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:50,330 | INFO     | [data] copytool_out thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:50,548 | INFO     | [payload] failed_post thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:50,562 | INFO     | [payload] control thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:50,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-15 19:07:00] 2025-05-15 23:06:51,685 | INFO     | [job] queue monitor thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:53,144 | INFO     | [data] queue_monitor thread has finished
[2025-05-15 19:07:00] 2025-05-15 23:06:54,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719821117248)>', '<ExcThread(monitor, started 139719060985600)>']
[2025-05-15 19:07:00] 2025-05-15 23:06:54,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-15 19:07:00] 2025-05-15 23:06:54,856 | INFO     | [monitor] control thread has ended
[2025-05-15 19:07:00] 2025-05-15 23:06:59,342 | INFO     | all workflow threads have been joined
[2025-05-15 19:07:00] 2025-05-15 23:06:59,342 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-15 19:07:00] 2025-05-15 23:06:59,343 | INFO     | traces error code: 0
[2025-05-15 19:07:00] 2025-05-15 23:06:59,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-15 19:07:00] 2025-05-15 23:06:59,674 [wrapper] ==== pilot stdout END ====
[2025-05-15 19:07:00] 2025-05-15 23:06:59,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-15 19:07:00] 2025-05-15 23:06:59,733 [wrapper] pilotpid: 2631142
[2025-05-15 19:07:00] 2025-05-15 23:06:59,781 [wrapper] Pilot exit status: 0
[2025-05-15 19:07:00] 2025-05-15 23:06:59,860 [wrapper] pandaids: 6650260402
[2025-05-15 19:07:00] 2025-05-15 23:07:00,055 [wrapper] cleanup supervisor_pilot 2671843 2631143
[2025-05-15 19:07:00] 2025-05-15 23:07:00,077 [wrapper] Test setup, not cleaning
[2025-05-15 19:07:00] 2025-05-15 23:07:00,098 [wrapper] apfmon messages muted
[2025-05-15 19:07:00] 2025-05-15 23:07:00,133 [wrapper] ==== wrapper stdout END ====
[2025-05-15 19:07:00] 2025-05-15 23:07:00,140 [wrapper] ==== wrapper stderr END ====
[2025-05-15 19:07:00]  *** Error codes and diagnostics ***
[2025-05-15 19:07:00]     "exeErrorCode": 0,
[2025-05-15 19:07:00]     "exeErrorDiag": "",
[2025-05-15 19:07:00]     "pilotErrorCode": 0,
[2025-05-15 19:07:00]     "pilotErrorDiag": "",
[2025-05-15 19:07:00]  *** Listing of results directory ***
[2025-05-15 19:07:00] total 415812
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas    495897 May 15 05:10 pilot3.tar.gz
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas      5111 May 15 05:12 queuedata.json
[2025-05-15 19:07:00] -rwx------. 1 boincer umatlas     37140 May 15 05:12 runpilot2-wrapper.sh
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas       100 May 15 07:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-15 19:07:00] -rwxr-xr-x. 1 boincer umatlas      7986 May 15 07:58 run_atlas
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas       105 May 15 07:58 job.xml
[2025-05-15 19:07:00] -rw-r--r--. 2 boincer umatlas 220410993 May 15 07:58 EVNT.44638096._001440.pool.root.1
[2025-05-15 19:07:00] -rw-r--r--. 2 boincer umatlas     17569 May 15 07:58 start_atlas.sh
[2025-05-15 19:07:00] drwxrwx--x. 2 boincer umatlas      4096 May 15 07:58 shared
[2025-05-15 19:07:00] -rw-r--r--. 2 boincer umatlas    508887 May 15 07:58 input.tar.gz
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas         0 May 15 07:58 boinc_lockfile
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas      2538 May 15 07:58 pandaJob.out
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas       467 May 15 07:58 setup.sh.local
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas    995410 May 15 07:59 agis_schedconf.cvmfs.json
[2025-05-15 19:07:00] drwx------. 4 boincer umatlas      4096 May 15 07:59 pilot3
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas      6898 May 15 19:04 init_data.xml
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas 194356933 May 15 19:05 HITS.44638099._021671.pool.root.1
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas       531 May 15 19:05 boinc_task_state.xml
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas        95 May 15 19:05 pilot_heartbeat.json
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas      1032 May 15 19:06 memory_monitor_summary.json
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas   1596741 May 15 19:06 agis_ddmendpoints.agis.ALL.json
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas    589066 May 15 19:06 log.44638099._021671.job.log.tgz.1
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas      7695 May 15 19:06 heartbeat.json
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas        28 May 15 19:06 wrapper_checkpoint.txt
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas      4353 May 15 19:06 pilotlog.txt
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas      8192 May 15 19:07 boinc_mmap_file
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas   2999824 May 15 19:07 log.44638099._021671.job.log.1
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas       357 May 15 19:07 output.list
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas       620 May 15 19:07 runtime_log
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas   3604480 May 15 19:07 result.tar.gz
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas     11419 May 15 19:07 runtime_log.err
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas       659 May 15 19:07 52HODmIpjZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCvIKDmXivvSn.diag
[2025-05-15 19:07:00] -rw-r--r--. 1 boincer umatlas     20848 May 15 19:07 stderr.txt
[2025-05-15 19:07:00] HITS file was successfully produced:
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas 194356933 May 15 19:05 shared/HITS.pool.root.1
[2025-05-15 19:07:00]  *** Contents of shared directory: ***
[2025-05-15 19:07:00] total 409100
[2025-05-15 19:07:00] -rw-r--r--. 2 boincer umatlas 220410993 May 15 07:58 ATLAS.root_0
[2025-05-15 19:07:00] -rw-r--r--. 2 boincer umatlas     17569 May 15 07:58 start_atlas.sh
[2025-05-15 19:07:00] -rw-r--r--. 2 boincer umatlas    508887 May 15 07:58 input.tar.gz
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas 194356933 May 15 19:05 HITS.pool.root.1
[2025-05-15 19:07:00] -rw-------. 1 boincer umatlas   3604480 May 15 19:07 result.tar.gz
19:07:01 (2626543): run_atlas exited; CPU time 44369.252166
19:07:01 (2626543): called boinc_finish(0)

</stderr_txt>
]]>

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