Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:23:35 (29032): wrapper (7.7.26015): starting
21:23:35 (29032): wrapper: running run_atlas (--nthreads 8)
[2025-05-15 21:23:35] Arguments: --nthreads 8
[2025-05-15 21:23:35] Threads: 8
[2025-05-15 21:23:35] Checking for CVMFS
[2025-05-15 21:23:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-15 21:23:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-15 21:23:36] Running cvmfs_config stat atlas.cern.ch
[2025-05-15 21:23:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-15 21:23:37] 2.11.2.0 19741 4811 76924 146039 2 14 14218743 25165824 4645 130560 0 4179687 99.713 6120105 1054 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-15 21:23:37] CVMFS is ok
[2025-05-15 21:23:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-15 21:23:37] Checking for apptainer binary...
[2025-05-15 21:23:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-15 21:23:37] Running /usr/bin/apptainer --version
[2025-05-15 21:23:37] apptainer version 1.3.2-1.el7
[2025-05-15 21:23:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-15 21:23:56] cg-vwn339.simple-grid.lan
[2025-05-15 21:23:56] apptainer works
[2025-05-15 21:23:56] Set ATHENA_PROC_NUMBER=8
[2025-05-15 21:23:56] Set ATHENA_CORE_NUMBER=8
[2025-05-15 21:23:57] Starting ATLAS job with PandaID=6650124704
[2025-05-15 21:23:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/33 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 03:02:11]  *** The last 200 lines of the pilot log: ***
[2025-05-16 03:02:11] 2025-05-16 00:41:44,212 | INFO     | mean x: 1747346679.5
[2025-05-16 03:02:11] 2025-05-16 00:41:44,212 | INFO     | mean y: 2430890.206081081
[2025-05-16 03:02:11] 2025-05-16 00:41:44,212 | INFO     | -- intersect: -44385039646.886086
[2025-05-16 03:02:11] 2025-05-16 00:41:44,212 | INFO     | intersect: -44385039646.886086
[2025-05-16 03:02:11] 2025-05-16 00:41:44,213 | INFO     | chi2: 8.461462609297943
[2025-05-16 03:02:11] 2025-05-16 00:41:44,213 | INFO     | current chi2=8.461462609297943 (change=7.7591264576305745 %)
[2025-05-16 03:02:11] 2025-05-16 00:41:44,213 | INFO     | right removable region: 295
[2025-05-16 03:02:11] 2025-05-16 00:41:44,213 | INFO     | sum of square deviations: 8041713570.0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,219 | INFO     | sum of deviations: 86556043787.5
[2025-05-16 03:02:11] 2025-05-16 00:41:44,220 | INFO     | mean x: 1747346984.5
[2025-05-16 03:02:11] 2025-05-16 00:41:44,220 | INFO     | mean y: 2462083.739864865
[2025-05-16 03:02:11] 2025-05-16 00:41:44,220 | INFO     | -- intersect: -18804902887.148808
[2025-05-16 03:02:11] 2025-05-16 00:41:44,220 | INFO     | intersect: -18804902887.148808
[2025-05-16 03:02:11] 2025-05-16 00:41:44,220 | INFO     | chi2: 4.4812406739181725
[2025-05-16 03:02:11] 2025-05-16 00:41:44,221 | INFO     | current chi2=4.4812406739181725 (change=51.14868747849908 %)
[2025-05-16 03:02:11] 2025-05-16 00:41:44,221 | INFO     | sum of square deviations: 7641036290.0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,224 | INFO     | sum of deviations: 20704446759.999992
[2025-05-16 03:02:11] 2025-05-16 00:41:44,224 | INFO     | mean x: 1747347137.0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,224 | INFO     | mean y: 2487122.0549828177
[2025-05-16 03:02:11] 2025-05-16 00:41:44,225 | INFO     | -- intersect: -4732192101.573585
[2025-05-16 03:02:11] 2025-05-16 00:41:44,225 | INFO     | intersect: -4732192101.573585
[2025-05-16 03:02:11] 2025-05-16 00:41:44,225 | INFO     | chi2: 2.5824385602032427
[2025-05-16 03:02:11] 2025-05-16 00:41:44,225 | INFO     | current chi2=2.5824385602032427 (change=42.372241347499696 %)
[2025-05-16 03:02:11] 2025-05-16 00:41:44,226 | INFO     | sum of square deviations: 7253894147.5
[2025-05-16 03:02:11] 2025-05-16 00:41:44,229 | INFO     | sum of deviations: -33518308761.5
[2025-05-16 03:02:11] 2025-05-16 00:41:44,229 | INFO     | mean x: 1747347289.5
[2025-05-16 03:02:11] 2025-05-16 00:41:44,229 | INFO     | mean y: 2508481.6398601397
[2025-05-16 03:02:11] 2025-05-16 00:41:44,229 | INFO     | -- intersect: 8076533932.261605
[2025-05-16 03:02:11] 2025-05-16 00:41:44,229 | INFO     | intersect: 8076533932.261605
[2025-05-16 03:02:11] 2025-05-16 00:41:44,230 | INFO     | chi2: 1.3077838027860378
[2025-05-16 03:02:11] 2025-05-16 00:41:44,230 | INFO     | current chi2=1.3077838027860378 (change=49.35857050232735 %)
[2025-05-16 03:02:11] 2025-05-16 00:41:44,230 | INFO     | sum of square deviations: 6880054580.0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,239 | INFO     | sum of deviations: -54321271101.0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,239 | INFO     | mean x: 1747347442.0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,239 | INFO     | mean y: 2516903.6298932387
[2025-05-16 03:02:11] 2025-05-16 00:41:44,239 | INFO     | -- intersect: 13798647879.166553
[2025-05-16 03:02:11] 2025-05-16 00:41:44,239 | INFO     | intersect: 13798647879.166553
[2025-05-16 03:02:11] 2025-05-16 00:41:44,240 | INFO     | chi2: 0.9733531112041323
[2025-05-16 03:02:11] 2025-05-16 00:41:44,240 | INFO     | current chi2=0.9733531112041323 (change=25.57232249470065 %)
[2025-05-16 03:02:11] 2025-05-16 00:41:44,240 | INFO     | sum of square deviations: 6519285025.0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,243 | INFO     | sum of deviations: -45673723403.999985
[2025-05-16 03:02:11] 2025-05-16 00:41:44,243 | INFO     | mean x: 1747347594.5
[2025-05-16 03:02:11] 2025-05-16 00:41:44,243 | INFO     | mean y: 2513245.6666666665
[2025-05-16 03:02:11] 2025-05-16 00:41:44,243 | INFO     | -- intersect: 12244326637.134043
[2025-05-16 03:02:11] 2025-05-16 00:41:44,243 | INFO     | intersect: 12244326637.134043
[2025-05-16 03:02:11] 2025-05-16 00:41:44,244 | INFO     | chi2: 0.9561439006483209
[2025-05-16 03:02:11] 2025-05-16 00:41:44,244 | INFO     | current chi2=0.9561439006483209 (change=1.7680336516849378 %)
[2025-05-16 03:02:11] 2025-05-16 00:41:44,244 | INFO     | left removable region: 50
[2025-05-16 03:02:11] 2025-05-16 00:41:44,244 | INFO     | sum of square deviations: 4560048290.0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,246 | INFO     | sum of deviations: 9896679528.0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,247 | INFO     | mean x: 1747348174.0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,247 | INFO     | mean y: 2503788.8040816328
[2025-05-16 03:02:11] 2025-05-16 00:41:44,260 | INFO     | -- intersect: -3789768529.854628
[2025-05-16 03:02:11] 2025-05-16 00:41:44,260 | INFO     | intersect: -3789768529.854628
[2025-05-16 03:02:11] 2025-05-16 00:41:44,261 | INFO     | chi2: 0.0006970370571518159
[2025-05-16 03:02:11] 2025-05-16 00:41:44,261 | INFO     | -- intersect: -3789768529.854628
[2025-05-16 03:02:11] 2025-05-16 00:41:44,261 | INFO     | current memory leak: 2.17 B/s (using 245 data points, chi2=0.00)
[2025-05-16 03:02:11] 2025-05-16 00:41:44,262 | INFO     | ..............................
[2025-05-16 03:02:11] 2025-05-16 00:41:44,262 | INFO     | . Timing measurements:
[2025-05-16 03:02:11] 2025-05-16 00:41:44,262 | INFO     | . get job = 0 s
[2025-05-16 03:02:11] 2025-05-16 00:41:44,262 | INFO     | . initial setup = 9 s
[2025-05-16 03:02:11] 2025-05-16 00:41:44,262 | INFO     | . payload setup = 121 s
[2025-05-16 03:02:11] 2025-05-16 00:41:44,262 | INFO     | . stage-in = 0 s
[2025-05-16 03:02:11] 2025-05-16 00:41:44,262 | INFO     | . payload execution = 18468 s
[2025-05-16 03:02:11] 2025-05-16 00:41:44,263 | INFO     | . stage-out = 3 s
[2025-05-16 03:02:11] 2025-05-16 00:41:44,263 | INFO     | . log creation = 1 s
[2025-05-16 03:02:11] 2025-05-16 00:41:44,263 | INFO     | ..............................
[2025-05-16 03:02:11] 2025-05-16 00:41:44,404 | INFO     | 
[2025-05-16 03:02:11] 2025-05-16 00:41:44,404 | INFO     | job summary report
[2025-05-16 03:02:11] 2025-05-16 00:41:44,404 | INFO     | --------------------------------------------------
[2025-05-16 03:02:11] 2025-05-16 00:41:44,404 | INFO     | PanDA job id: 6650124704
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | task id: 44638099
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | errors: (none)
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | pilot state: finished 
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | transexitcode: 0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | exeerrorcode: 0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | exeerrordiag: 
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | exitcode: 0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | exitmsg: OK
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | cpuconsumptiontime: 67949 s
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | nevents: 400
[2025-05-16 03:02:11] 2025-05-16 00:41:44,405 | INFO     | neventsw: 0
[2025-05-16 03:02:11] 2025-05-16 00:41:44,406 | INFO     | pid: 11321
[2025-05-16 03:02:11] 2025-05-16 00:41:44,406 | INFO     | pgrp: 11321
[2025-05-16 03:02:11] 2025-05-16 00:41:44,406 | INFO     | corecount: 8
[2025-05-16 03:02:11] 2025-05-16 00:41:44,406 | INFO     | event service: False
[2025-05-16 03:02:11] 2025-05-16 00:41:44,406 | INFO     | sizes: {0: 2392883, 1: 2393569, 2: 2393768, 13: 2393768, 24: 2393824, 34: 2393852, 45: 2394008, 56: 2394036, 67: 2394064, 77: 2394092, 88: 2394148, 92: 2394662, 99
[2025-05-16 03:02:11] 2025-05-16 00:41:44,406 | INFO     | --------------------------------------------------
[2025-05-16 03:02:11] 2025-05-16 00:41:44,406 | INFO     | 
[2025-05-16 03:02:11] 2025-05-16 00:41:44,406 | INFO     | executing command: ls -lF /var/lib/boinc/slots/33
[2025-05-16 03:02:11] 2025-05-16 00:41:44,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,595 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,595 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,595 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 03:02:11] 2025-05-16 00:41:44,596 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,597 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 03:02:11] 2025-05-16 00:41:44,597 | INFO     | job 6650124704 has completed (purged errors)
[2025-05-16 03:02:11] 2025-05-16 00:41:44,597 | INFO     | overall cleanup function is called
[2025-05-16 03:02:11] 2025-05-16 00:41:45,606 | INFO     | --- collectZombieJob: --- 10, [11321]
[2025-05-16 03:02:11] 2025-05-16 00:41:45,606 | INFO     | zombie collector waiting for pid 11321
[2025-05-16 03:02:11] 2025-05-16 00:41:45,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 03:02:11] 2025-05-16 00:41:45,606 | INFO     | collected zombie processes
[2025-05-16 03:02:11] 2025-05-16 00:41:45,606 | INFO     | will attempt to kill all subprocesses of pid=11321
[2025-05-16 03:02:11] 2025-05-16 00:41:45,733 | INFO     | process IDs to be killed: [11321] (in reverse order)
[2025-05-16 03:02:11] 2025-05-16 00:41:46,853 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 03:02:11] 2025-05-16 00:41:46,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 03:02:11] 2025-05-16 00:41:46,857 | INFO     | did not find any defunct processes belonging to 11321
[2025-05-16 03:02:11] 2025-05-16 00:41:46,860 | INFO     | did not find any defunct processes belonging to 11321
[2025-05-16 03:02:11] 2025-05-16 00:41:46,860 | INFO     | ready for new job
[2025-05-16 03:02:11] 2025-05-16 00:41:46,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 03:02:11] 2025-05-16 00:41:46,862 | INFO     | **************************************
[2025-05-16 03:02:11] 2025-05-16 00:41:46,862 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 03:02:11] 2025-05-16 00:41:46,862 | INFO     | **************************************
[2025-05-16 03:02:11] 2025-05-16 00:41:46,862 | INFO     | 
[2025-05-16 03:02:11] 2025-05-16 00:41:46,863 | INFO     | pilot is running in a VM
[2025-05-16 03:02:11] 2025-05-16 00:41:46,863 | INFO     | architecture information:
[2025-05-16 03:02:11] 2025-05-16 00:41:46,881 | INFO     | executing command: cat /etc/os-release
[2025-05-16 03:02:11] 2025-05-16 00:41:47,139 | INFO     | cat /etc/os-release:
[2025-05-16 03:02:11] NAME="CentOS Linux"
[2025-05-16 03:02:11] VERSION="7 (Core)"
[2025-05-16 03:02:11] ID="centos"
[2025-05-16 03:02:11] ID_LIKE="rhel fedora"
[2025-05-16 03:02:11] VERSION_ID="7"
[2025-05-16 03:02:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 03:02:11] ANSI_COLOR="0;31"
[2025-05-16 03:02:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 03:02:11] HOME_URL="https://www.centos.org/"
[2025-05-16 03:02:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 03:02:11] 
[2025-05-16 03:02:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 03:02:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 03:02:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 03:02:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 03:02:11] 
[2025-05-16 03:02:11] 2025-05-16 00:41:47,140 | INFO     | **************************************
[2025-05-16 03:02:11] 2025-05-16 00:41:47,643 | INFO     | executing command: df -mP /var/lib/boinc/slots/33
[2025-05-16 03:02:11] 2025-05-16 00:41:47,885 | INFO     | sufficient remaining disk space (496121151488 B)
[2025-05-16 03:02:11] 2025-05-16 00:41:47,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 03:02:11] 2025-05-16 00:41:47,886 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 03:02:11] 2025-05-16 00:41:47,886 | INFO     | update_server=False
[2025-05-16 03:02:11] 2025-05-16 00:41:47,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 03:02:11] 2025-05-16 00:41:47,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 03:02:11] 2025-05-16 00:41:47,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 03:02:11] 2025-05-16 00:41:47,993 | INFO     | aborting loop
[2025-05-16 03:02:11] 2025-05-16 00:41:48,184 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 03:02:11] 2025-05-16 00:41:48,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 03:02:11] 2025-05-16 00:41:48,184 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 03:02:11] 2025-05-16 00:41:48,361 | INFO     | all data control threads have been joined
[2025-05-16 03:02:11] 2025-05-16 00:41:48,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 03:02:11] 2025-05-16 00:41:48,892 | INFO     | [job] retrieve thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:48,909 | INFO     | all payload control threads have been joined
[2025-05-16 03:02:11] 2025-05-16 00:41:48,919 | INFO     | all job control threads have been joined
[2025-05-16 03:02:11] 2025-05-16 00:41:48,999 | INFO     | [job] job monitor thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:49,367 | INFO     | [data] control thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:49,396 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:49,404 | INFO     | [payload] failed_post thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:49,407 | INFO     | [data] copytool_in thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:49,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 03:02:11] 2025-05-16 00:41:49,676 | INFO     | [job] validate thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:49,781 | INFO     | [payload] validate_post thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:49,894 | INFO     | [data] copytool_out thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:49,915 | INFO     | [payload] control thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:49,925 | INFO     | [job] control thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:49,988 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:50,171 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:50,186 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:50,423 | INFO     | [job] queue monitor thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:52,452 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 03:02:11] 2025-05-16 00:41:53,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920742827840)>', '<ExcThread(monitor, started 139920152712960)>']
[2025-05-16 03:02:11] 2025-05-16 00:41:54,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 03:02:11] 2025-05-16 00:41:54,219 | INFO     | [monitor] control thread has ended
[2025-05-16 03:02:11] 2025-05-16 00:41:58,728 | INFO     | all workflow threads have been joined
[2025-05-16 03:02:11] 2025-05-16 00:41:58,728 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 03:02:11] 2025-05-16 00:41:58,728 | INFO     | traces error code: 0
[2025-05-16 03:02:11] 2025-05-16 00:41:58,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 03:02:11] 2025-05-16 00:41:59,144 [wrapper] ==== pilot stdout END ====
[2025-05-16 03:02:11] 2025-05-16 00:41:59,232 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 03:02:11] 2025-05-16 00:41:59,277 [wrapper] pilotpid: 4805
[2025-05-16 03:02:11] 2025-05-16 00:41:59,330 [wrapper] Pilot exit status: 0
[2025-05-16 03:02:11] 2025-05-16 00:41:59,866 [wrapper] pandaids: 6650124704
[2025-05-16 03:02:11] 2025-05-16 00:42:00,882 [wrapper] cleanup supervisor_pilot  5674 4806
[2025-05-16 03:02:11] 2025-05-16 00:42:00,959 [wrapper] Test setup, not cleaning
[2025-05-16 03:02:11] 2025-05-16 00:42:01,001 [wrapper] apfmon messages muted
[2025-05-16 03:02:11] 2025-05-16 00:42:01,082 [wrapper] ==== wrapper stdout END ====
[2025-05-16 03:02:11] 2025-05-16 00:42:01,161 [wrapper] ==== wrapper stderr END ====
[2025-05-16 03:02:11]  *** Error codes and diagnostics ***
[2025-05-16 03:02:11]     "exeErrorCode": 0,
[2025-05-16 03:02:11]     "exeErrorDiag": "",
[2025-05-16 03:02:11]     "pilotErrorCode": 0,
[2025-05-16 03:02:11]     "pilotErrorDiag": "",
[2025-05-16 03:02:11]  *** Listing of results directory ***
[2025-05-16 03:02:11] total 417832
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc    495897 May 15 06:39 pilot3.tar.gz
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc      5111 May 15 06:42 queuedata.json
[2025-05-16 03:02:11] -rwx------. 1 boinc boinc     37140 May 15 06:43 runpilot2-wrapper.sh
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc       100 May 15 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 03:02:11] -rwxr-xr-x. 1 boinc boinc      7986 May 15 21:23 run_atlas
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc       105 May 15 21:23 job.xml
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc      6371 May 15 21:23 init_data.xml
[2025-05-16 03:02:11] -rw-r--r--. 2 boinc boinc 219366763 May 15 21:23 EVNT.44638096._001322.pool.root.1
[2025-05-16 03:02:11] -rw-r--r--. 2 boinc boinc     17569 May 15 21:23 start_atlas.sh
[2025-05-16 03:02:11] drwxrwx--x. 2 boinc boinc        68 May 15 21:23 shared
[2025-05-16 03:02:11] -rw-r--r--. 2 boinc boinc    508883 May 15 21:23 input.tar.gz
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc         0 May 15 21:23 boinc_lockfile
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc      2539 May 15 21:23 pandaJob.out
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc       424 May 15 21:24 setup.sh.local
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc    995903 May 15 21:26 agis_schedconf.cvmfs.json
[2025-05-16 03:02:11] drwx------. 4 boinc boinc      4096 May 15 21:27 pilot3
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc 200625745 May 16 02:38 HITS.44638099._018706.pool.root.1
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc       531 May 16 02:39 boinc_task_state.xml
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc      1017 May 16 02:40 memory_monitor_summary.json
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc   1596741 May 16 02:40 agis_ddmendpoints.agis.ALL.json
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc    414711 May 16 02:40 log.44638099._018706.job.log.tgz.1
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc        95 May 16 02:41 pilot_heartbeat.json
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc      7689 May 16 02:41 heartbeat.json
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc      4417 May 16 02:41 pilotlog.txt
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc   1605092 May 16 02:42 log.44638099._018706.job.log.1
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc       357 May 16 02:42 output.list
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc       620 May 16 02:42 runtime_log
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc   2037760 May 16 02:42 result.tar.gz
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc     11031 May 16 02:42 runtime_log.err
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc       657 May 16 02:42 mjjNDmocfZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrOIKDmQ0jVkn.diag
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc      8192 May 16 03:02 boinc_mmap_file
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc        28 May 16 03:02 wrapper_checkpoint.txt
[2025-05-16 03:02:11] -rw-r--r--. 1 boinc boinc     20445 May 16 03:02 stderr.txt
[2025-05-16 03:02:11] HITS file was successfully produced:
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc 200625745 May 16 02:38 shared/HITS.pool.root.1
[2025-05-16 03:02:11]  *** Contents of shared directory: ***
[2025-05-16 03:02:11] total 412664
[2025-05-16 03:02:11] -rw-r--r--. 2 boinc boinc 219366763 May 15 21:23 ATLAS.root_0
[2025-05-16 03:02:11] -rw-r--r--. 2 boinc boinc     17569 May 15 21:23 start_atlas.sh
[2025-05-16 03:02:11] -rw-r--r--. 2 boinc boinc    508883 May 15 21:23 input.tar.gz
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc 200625745 May 16 02:38 HITS.pool.root.1
[2025-05-16 03:02:11] -rw-------. 1 boinc boinc   2037760 May 16 02:42 result.tar.gz
03:02:13 (29032): run_atlas exited; CPU time 68207.883708
03:02:13 (29032): called boinc_finish(0)

</stderr_txt>
]]>

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