Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-17 08:43:51 (2712): Detected: vboxwrapper 26206
2025-05-17 08:43:51 (2712): Detected: BOINC client v8.0.2
2025-05-17 08:43:53 (2712): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-17 08:43:53 (2712): Successfully copied 'init_data.xml' to the shared directory.
2025-05-17 08:43:53 (2712): Create VM. (boinc_b24a608d15bd3762, slot#0)
2025-05-17 08:43:54 (2712): Setting Memory Size for VM. (4400MB)
2025-05-17 08:43:54 (2712): Setting CPU Count for VM. (4)
2025-05-17 08:43:54 (2712): Setting Chipset Options for VM.
2025-05-17 08:43:55 (2712): Setting Graphics Controller Options for VM.
2025-05-17 08:43:55 (2712): Setting Boot Options for VM.
2025-05-17 08:43:55 (2712): Setting Network Configuration for NAT.
2025-05-17 08:43:56 (2712): Enabling VM Network Access.
2025-05-17 08:43:56 (2712): Disabling USB Support for VM.
2025-05-17 08:43:56 (2712): Disabling COM Port Support for VM.
2025-05-17 08:43:56 (2712): Disabling LPT Port Support for VM.
2025-05-17 08:43:57 (2712): Disabling Audio Support for VM.
2025-05-17 08:43:57 (2712): Disabling Clipboard Support for VM.
2025-05-17 08:43:57 (2712): Disabling Drag and Drop Support for VM.
2025-05-17 08:43:57 (2712): Adding storage controller(s) to VM.
2025-05-17 08:43:58 (2712): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-17 08:44:01 (2712): Adding VirtualBox Guest Additions to VM.
2025-05-17 08:44:01 (2712): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-17 08:44:01 (2712): forwarding host port 59255 to guest port 80
2025-05-17 08:44:01 (2712): Enabling remote desktop for VM.
2025-05-17 08:44:02 (2712): Required extension pack not installed, remote desktop not enabled.
2025-05-17 08:44:02 (2712): Enabling shared directory for VM.
2025-05-17 08:44:02 (2712): Starting VM using VBoxManage interface. (boinc_b24a608d15bd3762, slot#0)
2025-05-17 08:44:10 (2712): Successfully started VM. (PID = '9888')
2025-05-17 08:44:10 (2712): Reporting VM Process ID to BOINC.
2025-05-17 08:44:10 (2712): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-17 08:44:10 (2712): Guest Log: CPUID EDX: 0x178bfbff
2025-05-17 08:44:10 (2712): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-17 08:44:10 (2712): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-17 08:44:10 (2712): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-17 08:44:10 (2712): Detected: Web Application Enabled (http://localhost:59255)
2025-05-17 08:44:10 (2712): Preference change detected
2025-05-17 08:44:10 (2712): Setting CPU throttle for VM. (100%)
2025-05-17 08:44:10 (2712): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-17 08:44:12 (2712): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-17 08:44:12 (2712): Guest Log: BIOS: Booting from Hard Disk...
2025-05-17 08:44:16 (2712): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-17 08:44:16 (2712): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-17 08:44:16 (2712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-17 08:44:23 (2712): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-17 08:44:23 (2712): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-17 08:44:37 (2712): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-17 08:44:37 (2712): Guest Log: 00:00:00.000337 main     Log opened 2025-05-17T08:44:35.554216000Z
2025-05-17 08:44:37 (2712): Guest Log: 00:00:00.000557 main     OS Product: Linux
2025-05-17 08:44:37 (2712): Guest Log: 00:00:00.000628 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-17 08:44:37 (2712): Guest Log: 00:00:00.000698 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-17 08:44:37 (2712): Guest Log: 00:00:00.000814 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-17 08:44:37 (2712): Guest Log: 00:00:00.000817 main     Process ID: 1307
2025-05-17 08:44:37 (2712): Guest Log: 00:00:00.000819 main     Package type: LINUX_64BITS_GENERIC
2025-05-17 08:44:37 (2712): Guest Log: 00:00:00.002418 main     5.2.32 r132073 started. Verbose level = 0
2025-05-17 08:44:37 (2712): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-17 08:44:37 (2712): Guest Log: [INFO] Mounting shared directory
2025-05-17 08:44:37 (2712): Guest Log: [INFO] Checking for init_data.xml
2025-05-17 08:44:44 (2712): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-17 08:44:44 (2712): Guest Log: [INFO] Detected branch: prod
2025-05-17 08:44:44 (2712): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-17 08:44:44 (2712): Guest Log: Copying input files
2025-05-17 08:44:46 (2712): Guest Log: Copied input files into RunAtlas.
2025-05-17 08:44:46 (2712): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-05-17 08:44:47 (2712): Guest Log: 00:00:10.005717 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 491 438 000ns (GuestNow=1 747 464 287 067 053 000 ns GuestLast=1 747 471 475 558 491 000 ns fSetTimeLastLoop=true )
2025-05-17 08:44:55 (2712): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-17 08:44:56 (2712): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-17 08:44:56 (2712): Guest Log: 2.6.3.0 1586 0 31636 146092 4 1 3117515 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-05-17 08:44:57 (2712): Guest Log: copied the webapp to /var/www
2025-05-17 08:44:57 (2712): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-17 08:44:57 (2712): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-17 08:44:57 (2712): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-17 08:44:57 (2712): Guest Log:  *** Starting ATLAS job. (PandaID=6650123326 taskID=44638099) ***
2025-05-17 10:24:17 (2712): Status Report: Elapsed Time: '6000.000000'
2025-05-17 10:24:17 (2712): Status Report: CPU Time: '12487.359375'
2025-05-17 12:04:25 (2712): Status Report: Elapsed Time: '12000.000000'
2025-05-17 12:04:25 (2712): Status Report: CPU Time: '26984.312500'
2025-05-17 13:44:33 (2712): Status Report: Elapsed Time: '18000.000000'
2025-05-17 13:44:33 (2712): Status Report: CPU Time: '41317.250000'
2025-05-17 15:24:41 (2712): Status Report: Elapsed Time: '24000.000000'
2025-05-17 15:24:41 (2712): Status Report: CPU Time: '55756.015625'
2025-05-17 17:04:48 (2712): Status Report: Elapsed Time: '30000.000000'
2025-05-17 17:04:48 (2712): Status Report: CPU Time: '70165.234375'
2025-05-17 18:44:56 (2712): Status Report: Elapsed Time: '36000.000000'
2025-05-17 18:44:56 (2712): Status Report: CPU Time: '84077.312500'
2025-05-17 19:12:41 (2712): Guest Log:  *** Job finished ***
2025-05-17 19:12:41 (2712): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:26,615 | INFO     | [payload] failed_post thread has finished
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:26,676 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:30,777 | INFO     | [data] queue_monitor thread has finished
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:31,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550976583488)>', '<ExcThread(monitor, started 140550674028288)>']
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:32,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:32,441 | INFO     | [monitor] control thread has ended
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,171 | INFO     | all workflow threads have been joined
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,171 | INFO     | end of generic workflow (traces error code: 0)
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,172 | INFO     | traces error code: 0
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,172 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,351 [wrapper] ==== pilot stdout END ====
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,359 [wrapper] ==== wrapper stdout RESUME ====
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,366 [wrapper] pilotpid: 5916
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,374 [wrapper] Pilot exit status: 0
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,410 [wrapper] pandaids: 6650123326
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,469 [wrapper] cleanup supervisor_pilot 13594 5917
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,477 [wrapper] Test setup, not cleaning
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,485 [wrapper] apfmon messages muted
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,492 [wrapper] ==== wrapper stdout END ====
2025-05-17 19:12:41 (2712): Guest Log: 2025-05-17 17:12:36,500 [wrapper] ==== wrapper stderr END ====
2025-05-17 19:12:41 (2712): Guest Log:  *** Error codes and diagnostics ***
2025-05-17 19:12:41 (2712): Guest Log:     "exeErrorCode": 0,
2025-05-17 19:12:41 (2712): Guest Log:     "exeErrorDiag": "",
2025-05-17 19:12:41 (2712): Guest Log:     "pilotErrorCode": 0,
2025-05-17 19:12:41 (2712): Guest Log:     "pilotErrorDiag": "",
2025-05-17 19:12:41 (2712): Guest Log:  *** Listing of results directory ***
2025-05-17 19:12:41 (2712): Guest Log: total 193884
2025-05-17 19:12:41 (2712): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 15 03:42 pilot3.tar.gz
2025-05-17 19:12:41 (2712): Guest Log: -rwx------. 1 atlas atlas     37140 May 15 03:47 runpilot2-wrapper.sh
2025-05-17 19:12:41 (2712): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 15 03:47 queuedata.json
2025-05-17 19:12:41 (2712): Guest Log: -rwxr-xr-x. 1 atlas atlas      8361 May 17 06:44 init_data.xml
2025-05-17 19:12:41 (2712): Guest Log: -rwxr-xr-x. 1 atlas atlas    508873 May 17 06:44 input.tar.gz
2025-05-17 19:12:41 (2712): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May 17 06:44 start_atlas.sh
2025-05-17 19:12:41 (2712): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 17 06:44 EVNT.44638096._000289.pool.root.1 -> /data/./ATLAS.root_0
2025-05-17 19:12:41 (2712): Guest Log: -rw-r--r--. 1 atlas atlas      2539 May 17 06:44 pandaJob.out
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas       461 May 17 06:44 setup.sh.local
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas    994635 May 17 06:46 agis_schedconf.cvmfs.json
2025-05-17 19:12:41 (2712): Guest Log: drwx------. 4 atlas atlas      4096 May 17 06:46 pilot3
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas 188000858 May 17 17:10 HITS.44638099._017939.pool.root.1
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas      1032 May 17 17:11 memory_monitor_summary.json
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas   1596741 May 17 17:12 agis_ddmendpoints.agis.ALL.json
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas    512654 May 17 17:12 log.44638099._017939.job.log.tgz.1
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas        95 May 17 17:12 pilot_heartbeat.json
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas      7690 May 17 17:12 heartbeat.json
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas      4536 May 17 17:12 pilotlog.txt
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas   2867695 May 17 17:12 log.44638099._017939.job.log.1
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas       357 May 17 17:12 output.list
2025-05-17 19:12:41 (2712): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 17 17:12 runtime_log
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas   3399680 May 17 17:12 result.tar.gz
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas       666 May 17 17:12 uaCNDmakeZ7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsxGKDmStfSon.diag
2025-05-17 19:12:41 (2712): Guest Log: -rw-r--r--. 1 atlas atlas     11316 May 17 17:12 runtime_log.err
2025-05-17 19:12:41 (2712): Guest Log: Looking for outputfile HITS.44638099._017939.pool.root.1
2025-05-17 19:12:41 (2712): Guest Log: HITS file was successfully produced
2025-05-17 19:12:41 (2712): Guest Log: -rw-------. 1 atlas atlas 188000858 May 17 17:10 /home/atlas/RunAtlas/HITS.44638099._017939.pool.root.1
2025-05-17 19:12:43 (2712): Guest Log: Successfully finished the ATLAS job!
2025-05-17 19:12:43 (2712): Guest Log: Copying the results back to the shared directory!
2025-05-17 19:12:43 (2712): Guest Log:  *** Contents of shared directory: ***
2025-05-17 19:12:43 (2712): Guest Log: total 403492
2025-05-17 19:12:43 (2712): Guest Log: -rwxrwxrwx. 1 root root 221228964 May 17 06:43 ATLAS.root_0
2025-05-17 19:12:43 (2712): Guest Log: -rwxrwxrwx. 1 root root 188000858 May 17 17:12 HITS.pool.root.1
2025-05-17 19:12:43 (2712): Guest Log: -rwxrwxrwx. 1 root root      8361 May 17 06:43 init_data.xml
2025-05-17 19:12:43 (2712): Guest Log: -rwxrwxrwx. 1 root root    508873 May 15 09:12 input.tar.gz
2025-05-17 19:12:43 (2712): Guest Log: -rwxrwxrwx. 1 root root   3399680 May 17 17:12 result.tar.gz
2025-05-17 19:12:43 (2712): Guest Log: -rwxrwxrwx. 1 root root     17569 May 15 09:12 start_atlas.sh
2025-05-17 19:12:43 (2712): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-17 19:12:43 (2712): VM Completion File Detected.
2025-05-17 19:12:43 (2712): Powering off VM.
2025-05-17 19:12:44 (2712): Successfully stopped VM.
2025-05-17 19:12:44 (2712): Deregistering VM. (boinc_b24a608d15bd3762, slot#0)
2025-05-17 19:12:44 (2712): Removing network bandwidth throttle group from VM.
2025-05-17 19:12:45 (2712): Removing VM from VirtualBox.
19:12:50 (2712): called boinc_finish(0)

</stderr_txt>
]]>

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