Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:15:59 (785475): wrapper (7.7.26015): starting
13:15:59 (785475): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 13:15:59] Arguments: --nthreads 4
[2025-05-16 13:15:59] Threads: 4
[2025-05-16 13:15:59] Checking for CVMFS
[2025-05-16 13:15:59] No cvmfs_config command found, will try listing directly
[2025-05-16 13:15:59] CVMFS is ok
[2025-05-16 13:15:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 13:15:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 13:15:59] Further information can be found at the LHC@home message board.
[2025-05-16 13:15:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 13:15:59] Checking for apptainer binary...
[2025-05-16 13:15:59] which: no apptainer in ((null))
[2025-05-16 13:15:59] apptainer is not installed, using version from CVMFS
[2025-05-16 13:15:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 13:15:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-05-16 13:15:59] apptainer works
[2025-05-16 13:15:59] Set ATHENA_PROC_NUMBER=4
[2025-05-16 13:15:59] Set ATHENA_CORE_NUMBER=4
[2025-05-16 13:16:00] Starting ATLAS job with PandaID=6650122676
[2025-05-16 13:16:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 13:25:42]  *** The last 200 lines of the pilot log: ***
[2025-05-16 13:25:42] 2025-05-16 11:25:28,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | WARNING  | wrong length of table data, x=[1747394265.0, 1747394326.0, 1747394387.0, 1747394448.0], y=[347.0, 311585.0, 312315.0, 312315.0] (must be same and length>=4)
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | ..............................
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . Timing measurements:
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . get job = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . initial setup = 61 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . payload setup = 8 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . stage-in = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . payload execution = 231 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | . stage-out = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | . log creation = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | ..............................
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot28/slots/1/PanDA_Pilot-6650122676/pilotlog.txt
[2025-05-16 13:25:42] 2025-05-16 11:25:28,791 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-16 13:25:42] - Log from pilotlog.txt -
[2025-05-16 13:25:42] 2025-05-16 11:25:28,762 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-16 13:25:42] 2025-05-16 11:25:28,763 | INFO     | using path: /scratch/boinc/var/slot28/slots/1/PanDA_Pilot-6650122676/memory_monitor_summary.json (trf name=prmon)
[2025-05-16 13:25:42] 2025-05-16 11:25:28,767 | INFO     | extracted standard info from prmon json
[2025-05-16 13:25:42] 2025-05-16 11:25:28,767 | INFO     | extracted standard memory fields from prmon json
[2025-05-16 13:25:42] 2025-05-16 11:25:28,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-16 13:25:42] 2025-05-16 11:25:28,768 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-16 13:25:42] 2025-05-16 11:25:28,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | WARNING  | wrong length of table data, x=[1747394265.0, 1747394326.0, 1747394387.0, 1747394448.0], y=[347.0, 311585.0, 312315.0, 312315.0] (must be same and length>=4)
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | ..............................
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . Timing measurements:
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . get job = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . initial setup = 61 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . payload setup = 8 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . stage-in = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . payload execution = 231 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | . stage-out = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | . log creation = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | ..............................
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot28/slots/1/PanDA_Pilot-6650122676/pilotlog.txt
[2025-05-16 13:25:42] 2025-05-16 11:25:28,791 | WARNING  | 
[2025-05-16 13:25:42] [begin log extracts]
[2025-05-16 13:25:42] - Log from pilotlog.txt -
[2025-05-16 13:25:42] 2025-05-16 11:25:28,762 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-16 13:25:42] 2025-05-16 11:25:28,763 | INFO     | using path: /scratch/boinc/var/slot28/slots/1/PanDA_Pilot-6650122676/memory_monitor_summary.json (trf name=prmon)
[2025-05-16 13:25:42] 2025-05-16 11:25:28,767 | INFO     | extracted standard info from prmon json
[2025-05-16 13:25:42] 2025-05-16 11:25:28,767 | INFO     | extracted standard memory fields from prmon json
[2025-05-16 13:25:42] 2025-05-16 11:25:28,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-16 13:25:42] 2025-05-16 11:25:28,768 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-16 13:25:42] 2025-05-16 11:25:28,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | WARNING  | wrong length of table data, x=[1747394265.0, 1747394326.0, 1747394387.0, 1747394448.0], y=[347.0, 311585.0, 312315.0, 312315.0] (must be same and length>=4)
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | ..............................
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . Timing measurements:
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . get job = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . initial setup = 61 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . payload setup = 8 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . stage-in = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,769 | INFO     | . payload execution = 231 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | . stage-out = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | . log creation = 0 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | ..............................
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-16 13:25:42] 2025-05-16 11:25:28,770 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot28/slots/1/PanDA_Pilot-6650122676/pilotlog.txt
[2025-05-16 13:25:42] [end log extracts]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,791 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-16 13:25:42] 2025-05-16 11:25:28,792 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-16 13:25:42] 2025-05-16 11:25:28,898 | INFO     | 
[2025-05-16 13:25:42] 2025-05-16 11:25:28,899 | INFO     | job summary report
[2025-05-16 13:25:42] 2025-05-16 11:25:28,899 | INFO     | --------------------------------------------------
[2025-05-16 13:25:42] 2025-05-16 11:25:28,900 | INFO     | PanDA job id: 6650122676
[2025-05-16 13:25:42] 2025-05-16 11:25:28,900 | INFO     | task id: 44638099
[2025-05-16 13:25:42] 2025-05-16 11:25:28,900 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-16 13:21:25,727 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-16 13:25:42] 2025-05-16 11:25:28,900 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 13:25:42] 2025-05-16 11:25:28,900 | INFO     | pilot state: failed 
[2025-05-16 13:25:42] 2025-05-16 11:25:28,900 | INFO     | transexitcode: 65
[2025-05-16 13:25:42] 2025-05-16 11:25:28,900 | INFO     | exeerrorcode: 65
[2025-05-16 13:25:42] 2025-05-16 11:25:28,900 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-16 13:25:42] 2025-05-16 11:25:28,900 | INFO     | exitcode: 65
[2025-05-16 13:25:42] 2025-05-16 11:25:28,901 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-16 13:25:42] 2025-05-16 11:25:28,901 | INFO     | cpuconsumptiontime: 29 s
[2025-05-16 13:25:42] 2025-05-16 11:25:28,901 | INFO     | nevents: 0
[2025-05-16 13:25:42] 2025-05-16 11:25:28,901 | INFO     | neventsw: 0
[2025-05-16 13:25:42] 2025-05-16 11:25:28,901 | INFO     | pid: 809243
[2025-05-16 13:25:42] 2025-05-16 11:25:28,901 | INFO     | pgrp: 809243
[2025-05-16 13:25:42] 2025-05-16 11:25:28,901 | INFO     | corecount: 4
[2025-05-16 13:25:42] 2025-05-16 11:25:28,901 | INFO     | event service: False
[2025-05-16 13:25:42] 2025-05-16 11:25:28,901 | INFO     | sizes: {0: 2393721, 6: 2393927, 11: 2393955, 331: 2417371, 332: 2421680, 336: 2421680, 478: 2421978}
[2025-05-16 13:25:42] 2025-05-16 11:25:28,901 | INFO     | --------------------------------------------------
[2025-05-16 13:25:42] 2025-05-16 11:25:28,901 | INFO     | 
[2025-05-16 13:25:42] 2025-05-16 11:25:28,902 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/1
[2025-05-16 13:25:42] 2025-05-16 11:25:28,931 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,931 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,931 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,932 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,932 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,932 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,932 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,932 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,932 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,932 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,932 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,933 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 13:25:42] 2025-05-16 11:25:28,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,933 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 13:25:42] 2025-05-16 11:25:28,933 | INFO     | job 6650122676 has completed (purged errors)
[2025-05-16 13:25:42] 2025-05-16 11:25:28,933 | INFO     | overall cleanup function is called
[2025-05-16 13:25:42] 2025-05-16 11:25:29,757 | INFO     | 558s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-16 13:25:42] 2025-05-16 11:25:29,940 | INFO     | --- collectZombieJob: --- 10, [809243]
[2025-05-16 13:25:42] 2025-05-16 11:25:29,941 | INFO     | zombie collector waiting for pid 809243
[2025-05-16 13:25:42] 2025-05-16 11:25:29,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 13:25:42] 2025-05-16 11:25:29,941 | INFO     | collected zombie processes
[2025-05-16 13:25:42] 2025-05-16 11:25:29,941 | INFO     | will attempt to kill all subprocesses of pid=809243
[2025-05-16 13:25:42] 2025-05-16 11:25:30,558 | INFO     | process IDs to be killed: [809243] (in reverse order)
[2025-05-16 13:25:42] 2025-05-16 11:25:30,789 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 13:25:42] 2025-05-16 11:25:30,790 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 13:25:42] 2025-05-16 11:25:30,862 | INFO     | did not find any defunct processes belonging to 809243
[2025-05-16 13:25:42] 2025-05-16 11:25:30,926 | INFO     | did not find any defunct processes belonging to 809243
[2025-05-16 13:25:42] 2025-05-16 11:25:30,927 | INFO     | ready for new job
[2025-05-16 13:25:42] 2025-05-16 11:25:30,927 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 13:25:42] 2025-05-16 11:25:30,929 | INFO     | **************************************
[2025-05-16 13:25:42] 2025-05-16 11:25:30,930 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 13:25:42] 2025-05-16 11:25:30,930 | INFO     | **************************************
[2025-05-16 13:25:42] 2025-05-16 11:25:30,930 | INFO     | 
[2025-05-16 13:25:42] 2025-05-16 11:25:30,942 | INFO     | architecture information:
[2025-05-16 13:25:42] 2025-05-16 11:25:30,943 | INFO     | executing command: cat /etc/os-release
[2025-05-16 13:25:42] 2025-05-16 11:25:30,966 | INFO     | cat /etc/os-release:
[2025-05-16 13:25:42] NAME="CentOS Linux"
[2025-05-16 13:25:42] VERSION="7 (Core)"
[2025-05-16 13:25:42] ID="centos"
[2025-05-16 13:25:42] ID_LIKE="rhel fedora"
[2025-05-16 13:25:42] VERSION_ID="7"
[2025-05-16 13:25:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 13:25:42] ANSI_COLOR="0;31"
[2025-05-16 13:25:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 13:25:42] HOME_URL="https://www.centos.org/"
[2025-05-16 13:25:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 13:25:42] 
[2025-05-16 13:25:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 13:25:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 13:25:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 13:25:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 13:25:42] 
[2025-05-16 13:25:42] 2025-05-16 11:25:30,967 | INFO     | **************************************
[2025-05-16 13:25:42] 2025-05-16 11:25:31,347 | INFO     | PID=793308 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-16 13:25:42] 2025-05-16 11:25:31,347 | INFO     | .. there are 23 such processes running
[2025-05-16 13:25:42] 2025-05-16 11:25:31,470 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/1
[2025-05-16 13:25:42] 2025-05-16 11:25:31,495 | INFO     | sufficient remaining disk space (3362211758080 B)
[2025-05-16 13:25:42] 2025-05-16 11:25:31,495 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 13:25:42] 2025-05-16 11:25:31,495 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 13:25:42] 2025-05-16 11:25:31,496 | INFO     | update_server=False
[2025-05-16 13:25:42] 2025-05-16 11:25:31,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 13:25:42] 2025-05-16 11:25:31,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 13:25:42] 2025-05-16 11:25:31,496 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-16 13:25:42] 2025-05-16 11:25:31,497 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 13:25:42] 2025-05-16 11:25:31,497 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 13:25:42] 2025-05-16 11:25:31,497 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 13:25:42] 2025-05-16 11:25:31,587 | INFO     | all data control threads have been joined
[2025-05-16 13:25:42] 2025-05-16 11:25:31,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 13:25:42] 2025-05-16 11:25:31,762 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-16 13:25:42] 2025-05-16 11:25:31,762 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-16 13:25:42] 2025-05-16 11:25:31,763 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 13:25:42] 2025-05-16 11:25:31,763 | INFO     | will abort loop
[2025-05-16 13:25:42] 2025-05-16 11:25:32,282 | INFO     | all payload control threads have been joined
[2025-05-16 13:25:42] 2025-05-16 11:25:32,501 | INFO     | [job] retrieve thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:32,585 | INFO     | all job control threads have been joined
[2025-05-16 13:25:42] 2025-05-16 11:25:32,590 | INFO     | [data] control thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:32,763 | INFO     | [job] job monitor thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:32,910 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:33,007 | INFO     | [job] validate thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:33,287 | INFO     | [payload] control thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:33,320 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:33,377 | INFO     | [data] copytool_in thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:33,407 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:33,421 | INFO     | [payload] validate_post thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:33,463 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:33,502 | INFO     | [data] copytool_out thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:33,591 | INFO     | [job] control thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:33,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 13:25:42] 2025-05-16 11:25:34,009 | INFO     | [payload] failed_post thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:34,915 | INFO     | [job] queue monitor thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:35,758 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 13:25:42] 2025-05-16 11:25:36,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22508742526784)>', '<ExcThread(monitor, started 22508484908800)>']
[2025-05-16 13:25:42] 2025-05-16 11:25:37,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 13:25:42] 2025-05-16 11:25:37,527 | INFO     | [monitor] control thread has ended
[2025-05-16 13:25:42] 2025-05-16 11:25:41,836 | INFO     | all workflow threads have been joined
[2025-05-16 13:25:42] 2025-05-16 11:25:41,837 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 13:25:42] 2025-05-16 11:25:41,837 | INFO     | traces error code: 0
[2025-05-16 13:25:42] 2025-05-16 11:25:41,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 13:25:42] 2025-05-16 11:25:41,985 [wrapper] ==== pilot stdout END ====
[2025-05-16 13:25:42] 2025-05-16 11:25:41,989 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 13:25:42] 2025-05-16 11:25:41,993 [wrapper] pilotpid: 793308
[2025-05-16 13:25:42] 2025-05-16 11:25:41,996 [wrapper] Pilot exit status: 0
[2025-05-16 13:25:42] 2025-05-16 11:25:42,008 [wrapper] pandaids: 6650122676
[2025-05-16 13:25:42] 2025-05-16 11:25:42,131 [wrapper] cleanup supervisor_pilot  793321 793309
[2025-05-16 13:25:42] 2025-05-16 11:25:42,135 [wrapper] Test setup, not cleaning
[2025-05-16 13:25:42] 2025-05-16 11:25:42,139 [wrapper] apfmon messages muted
[2025-05-16 13:25:42] 2025-05-16 11:25:42,144 [wrapper] ==== wrapper stdout END ====
[2025-05-16 13:25:42] 2025-05-16 11:25:42,147 [wrapper] ==== wrapper stderr END ====
[2025-05-16 13:25:42]  *** Error codes and diagnostics ***
[2025-05-16 13:25:42]     "exeErrorCode": 65,
[2025-05-16 13:25:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-16 13:25:42]     "pilotErrorCode": 1305,
[2025-05-16 13:25:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-16 13:25:42]  *** Listing of results directory ***
[2025-05-16 13:25:42] total 219860
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc    495897 May 15 04:41 pilot3.tar.gz
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc      5111 May 15 05:27 queuedata.json
[2025-05-16 13:25:42] -rwx------ 1 boinc boinc     37140 May 15 05:27 runpilot2-wrapper.sh
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc       100 May 16 12:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 13:25:42] -rwxr-xr-x 1 boinc boinc      7986 May 16 12:51 run_atlas
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc       105 May 16 12:51 job.xml
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc      6672 May 16 13:15 init_data.xml
[2025-05-16 13:25:42] -rw-r--r-- 2 boinc boinc 221299529 May 16 13:15 EVNT.44638096._000279.pool.root.1
[2025-05-16 13:25:42] drwxrwx--x 2 boinc boinc      4096 May 16 13:15 shared
[2025-05-16 13:25:42] -rw-r--r-- 2 boinc boinc    508877 May 16 13:15 input.tar.gz
[2025-05-16 13:25:42] -rw-r--r-- 2 boinc boinc     17569 May 16 13:15 start_atlas.sh
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc         0 May 16 13:15 boinc_lockfile
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc      2538 May 16 13:15 pandaJob.out
[2025-05-16 13:25:42] -rw------- 1 boinc boinc       424 May 16 13:16 setup.sh.local
[2025-05-16 13:25:42] -rw------- 1 boinc boinc         0 May 16 13:17 agis_ddmendpoints.agis.ALL.json
[2025-05-16 13:25:42] -rw------- 1 boinc boinc   1330093 May 16 13:17 cric_ddmendpoints.json
[2025-05-16 13:25:42] -rw------- 1 boinc boinc    989800 May 16 13:17 agis_schedconf.cvmfs.json
[2025-05-16 13:25:42] drwx------ 4 boinc boinc      4096 May 16 13:17 pilot3
[2025-05-16 13:25:42] -rw------- 1 boinc boinc       980 May 16 13:21 memory_monitor_summary.json
[2025-05-16 13:25:42] -rw------- 1 boinc boinc     23487 May 16 13:23 log.44638099._017685.job.log.tgz.1
[2025-05-16 13:25:42] -rw------- 1 boinc boinc        95 May 16 13:25 pilot_heartbeat.json
[2025-05-16 13:25:42] -rw------- 1 boinc boinc      8357 May 16 13:25 heartbeat.json
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc       524 May 16 13:25 boinc_task_state.xml
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc      8192 May 16 13:25 boinc_mmap_file
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc        23 May 16 13:25 wrapper_checkpoint.txt
[2025-05-16 13:25:42] -rw------- 1 boinc boinc      5067 May 16 13:25 pilotlog.txt
[2025-05-16 13:25:42] -rw------- 1 boinc boinc    106002 May 16 13:25 log.44638099._017685.job.log.1
[2025-05-16 13:25:42] -rw------- 1 boinc boinc       188 May 16 13:25 output.list
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc       620 May 16 13:25 runtime_log
[2025-05-16 13:25:42] -rw------- 1 boinc boinc    153600 May 16 13:25 result.tar.gz
[2025-05-16 13:25:42] -rw------- 1 boinc boinc       648 May 16 13:25 uswMDmMReZ7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9vGKDm0YzTRo.diag
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc     11270 May 16 13:25 runtime_log.err
[2025-05-16 13:25:42] -rw-r--r-- 1 boinc boinc     21851 May 16 13:25 stderr.txt
[2025-05-16 13:25:42] No HITS result produced
[2025-05-16 13:25:42]  *** Contents of shared directory: ***
[2025-05-16 13:25:42] total 216792
[2025-05-16 13:25:42] -rw-r--r-- 2 boinc boinc 221299529 May 16 13:15 ATLAS.root_0
[2025-05-16 13:25:42] -rw-r--r-- 2 boinc boinc    508877 May 16 13:15 input.tar.gz
[2025-05-16 13:25:42] -rw-r--r-- 2 boinc boinc     17569 May 16 13:15 start_atlas.sh
[2025-05-16 13:25:42] -rw------- 1 boinc boinc    153600 May 16 13:25 result.tar.gz
13:25:43 (785475): run_atlas exited; CPU time 35.665155
13:25:43 (785475): called boinc_finish(0)

</stderr_txt>
]]>

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