Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:27:57 (1507000): wrapper (7.7.26015): starting
09:27:57 (1507000): wrapper: running run_atlas (--nthreads 12)
[2025-05-15 09:27:57] Arguments: --nthreads 12
[2025-05-15 09:27:57] Threads: 12
[2025-05-15 09:27:57] Checking for CVMFS
[2025-05-15 09:27:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-15 09:27:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-15 09:27:57] Running cvmfs_config stat atlas.cern.ch
[2025-05-15 09:27:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-15 09:27:57] 2.11.5.0 3124282 4606 182688 146035 2 68 39093918 45568000 19660 130560 0 50946876 99.800 27822462 25900 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-15 09:27:57] CVMFS is ok
[2025-05-15 09:27:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-15 09:27:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-15 09:27:57] Further information can be found at the LHC@home message board.
[2025-05-15 09:27:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-15 09:27:57] Checking for apptainer binary...
[2025-05-15 09:27:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-15 09:27:57] Running /usr/bin/apptainer --version
[2025-05-15 09:27:57] apptainer version 1.4.0-1.el9
[2025-05-15 09:27:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-15 09:27:57] wns0067.triumf.lcg
[2025-05-15 09:27:57] apptainer works
[2025-05-15 09:27:57] Set ATHENA_PROC_NUMBER=12
[2025-05-15 09:27:57] Set ATHENA_CORE_NUMBER=12
[2025-05-15 09:27:57] Starting ATLAS job with PandaID=6649929226
[2025-05-15 09:27:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-15 10:43:37]  *** The last 200 lines of the pilot log: ***
[2025-05-15 10:43:37]  guid=2a4c2f0f-d9d7-460c-8e8b-62b0bd7d035e
[2025-05-15 10:43:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-15 10:43:37]  is_altstaged=None
[2025-05-15 10:43:37]  is_tar=False
[2025-05-15 10:43:37]  lfn=log.44638099._003859.job.log.tgz.1
[2025-05-15 10:43:37]  mtime=0
[2025-05-15 10:43:37]  protocol_id=None
[2025-05-15 10:43:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-15 10:43:37]  replicas=None
[2025-05-15 10:43:37]  scope=mc23_13p6TeV
[2025-05-15 10:43:37]  status=None
[2025-05-15 10:43:37]  status_code=0
[2025-05-15 10:43:37]  storage_token=
[2025-05-15 10:43:37]  surl=/home/boinc/slots/0/PanDA_Pilot-6649929226/log.44638099._003859.job.log.tgz.1
[2025-05-15 10:43:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/70/log.44638099._003859.job.log.tgz.1
[2025-05-15 10:43:37]  workdir=None
[2025-05-15 10:43:37] ]
[2025-05-15 10:43:37] 2025-05-15 17:43:09,614 | INFO     | transferring file log.44638099._003859.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6649929226/log.44638099._003859.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-05-15 10:43:37] 2025-05-15 17:43:09,614 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6649929226/log.44638099._003859.job.log.tgz.1 /home/boinc/slots/0/log.44638099._003859.job.log.t
[2025-05-15 10:43:37] 2025-05-15 17:43:09,627 | INFO     | adding to output.list: log.44638099._003859.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/70/log.44638099._003859.job.log.tg
[2025-05-15 10:43:37] 2025-05-15 17:43:09,628 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-15 10:43:37] 2025-05-15 17:43:09,628 | INFO     | summary of transferred files:
[2025-05-15 10:43:37] 2025-05-15 17:43:09,628 | INFO     |  -- lfn=log.44638099._003859.job.log.tgz.1, status_code=0, status=transferred
[2025-05-15 10:43:37] 2025-05-15 17:43:09,628 | INFO     | stage-out finished correctly
[2025-05-15 10:43:37] 2025-05-15 17:43:11,711 | WARNING  | process 1516935 can no longer be monitored (due to stat problems) - aborting
[2025-05-15 10:43:37] 2025-05-15 17:43:11,711 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6649929226/memory_monitor_summary.json (trf name=prmon)
[2025-05-15 10:43:37] 2025-05-15 17:43:11,839 | INFO     | number of running child processes to parent process 1516935: 1
[2025-05-15 10:43:37] 2025-05-15 17:43:11,840 | INFO     | maximum number of monitored processes: 6
[2025-05-15 10:43:37] 2025-05-15 17:43:12,184 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-15 10:43:37] 2025-05-15 17:43:13,329 | INFO     | job 6649929226 has state=finished
[2025-05-15 10:43:37] 2025-05-15 17:43:13,329 | INFO     | preparing for final server update for job 6649929226 in state='finished'
[2025-05-15 10:43:37] 2025-05-15 17:43:13,330 | INFO     | this job has now completed (state=finished)
[2025-05-15 10:43:37] 2025-05-15 17:43:13,330 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-15 10:43:37] 2025-05-15 17:43:13,330 | INFO     | log transfer has been attempted: DONE
[2025-05-15 10:43:37] 2025-05-15 17:43:13,330 | INFO     | job 6649929226 has finished - writing final server update
[2025-05-15 10:43:37] 2025-05-15 17:43:13,330 | INFO     | total number of processed events: 400 (read)
[2025-05-15 10:43:37] 2025-05-15 17:43:13,332 | INFO     | executing command: lscpu
[2025-05-15 10:43:37] 2025-05-15 17:43:13,370 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-15 10:43:37] 2025-05-15 17:43:14,342 | INFO     | monitor loop #334: job 0:6649929226 is in state 'finished'
[2025-05-15 10:43:37] 2025-05-15 17:43:14,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 10:43:37] 2025-05-15 17:43:16,040 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-15 10:43:37] 2025-05-15 17:43:16,040 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6649929226/memory_monitor_summary.json (trf name=prmon)
[2025-05-15 10:43:37] 2025-05-15 17:43:16,040 | INFO     | extracted standard info from prmon json
[2025-05-15 10:43:37] 2025-05-15 17:43:16,041 | INFO     | extracted standard memory fields from prmon json
[2025-05-15 10:43:37] 2025-05-15 17:43:16,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-15 10:43:37] 2025-05-15 17:43:16,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-15 10:43:37] 2025-05-15 17:43:16,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-15 10:43:37] 2025-05-15 17:43:16,042 | INFO     | fitting pss+swap vs Time
[2025-05-15 10:43:37] 2025-05-15 17:43:16,042 | INFO     | sum of square deviations: 93240818.0
[2025-05-15 10:43:37] 2025-05-15 17:43:16,043 | INFO     | sum of deviations: 13093867464.999998
[2025-05-15 10:43:37] 2025-05-15 17:43:16,043 | INFO     | mean x: 1747328840.0
[2025-05-15 10:43:37] 2025-05-15 17:43:16,043 | INFO     | mean y: 2740679.343283582
[2025-05-15 10:43:37] 2025-05-15 17:43:16,043 | INFO     | -- intersect: -245375761348.9442
[2025-05-15 10:43:37] 2025-05-15 17:43:16,043 | INFO     | intersect: -245375761348.9442
[2025-05-15 10:43:37] 2025-05-15 17:43:16,043 | INFO     | chi2: 2.1518064268206842
[2025-05-15 10:43:37] 2025-05-15 17:43:16,043 | INFO     | -- intersect: -245375761348.9442
[2025-05-15 10:43:37] 2025-05-15 17:43:16,043 | INFO     | current memory leak: 140.43 B/s (using 67 data points, chi2=2.15)
[2025-05-15 10:43:37] 2025-05-15 17:43:16,043 | INFO     | ..............................
[2025-05-15 10:43:37] 2025-05-15 17:43:16,044 | INFO     | . Timing measurements:
[2025-05-15 10:43:37] 2025-05-15 17:43:16,044 | INFO     | . get job = 0 s
[2025-05-15 10:43:37] 2025-05-15 17:43:16,044 | INFO     | . initial setup = 3 s
[2025-05-15 10:43:37] 2025-05-15 17:43:16,044 | INFO     | . payload setup = 7 s
[2025-05-15 10:43:37] 2025-05-15 17:43:16,044 | INFO     | . stage-in = 0 s
[2025-05-15 10:43:37] 2025-05-15 17:43:16,044 | INFO     | . payload execution = 4470 s
[2025-05-15 10:43:37] 2025-05-15 17:43:16,044 | INFO     | . stage-out = 0 s
[2025-05-15 10:43:37] 2025-05-15 17:43:16,044 | INFO     | . log creation = 0 s
[2025-05-15 10:43:37] 2025-05-15 17:43:16,044 | INFO     | ..............................
[2025-05-15 10:43:37] 2025-05-15 17:43:16,382 | INFO     | 
[2025-05-15 10:43:37] 2025-05-15 17:43:16,382 | INFO     | job summary report
[2025-05-15 10:43:37] 2025-05-15 17:43:16,382 | INFO     | --------------------------------------------------
[2025-05-15 10:43:37] 2025-05-15 17:43:16,382 | INFO     | PanDA job id: 6649929226
[2025-05-15 10:43:37] 2025-05-15 17:43:16,382 | INFO     | task id: 44638099
[2025-05-15 10:43:37] 2025-05-15 17:43:16,382 | INFO     | errors: (none)
[2025-05-15 10:43:37] 2025-05-15 17:43:16,382 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-15 10:43:37] 2025-05-15 17:43:16,382 | INFO     | pilot state: finished 
[2025-05-15 10:43:37] 2025-05-15 17:43:16,382 | INFO     | transexitcode: 0
[2025-05-15 10:43:37] 2025-05-15 17:43:16,382 | INFO     | exeerrorcode: 0
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | exeerrordiag: 
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | exitcode: 0
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | exitmsg: OK
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | cpuconsumptiontime: 33936 s
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | nevents: 400
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | neventsw: 0
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | pid: 1516935
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | pgrp: 1516935
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | corecount: 12
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | event service: False
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | sizes: {0: 2393705, 6: 2393911, 11: 2393939, 4481: 2419887, 4482: 2428822, 4484: 2428878, 4488: 2429176}
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | --------------------------------------------------
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | 
[2025-05-15 10:43:37] 2025-05-15 17:43:16,383 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-15 10:43:37] 2025-05-15 17:43:16,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-15 10:43:37] 2025-05-15 17:43:16,398 | INFO     | job 6649929226 has completed (purged errors)
[2025-05-15 10:43:37] 2025-05-15 17:43:16,398 | INFO     | overall cleanup function is called
[2025-05-15 10:43:37] 2025-05-15 17:43:17,405 | INFO     | --- collectZombieJob: --- 10, [1516935]
[2025-05-15 10:43:37] 2025-05-15 17:43:17,405 | INFO     | zombie collector waiting for pid 1516935
[2025-05-15 10:43:37] 2025-05-15 17:43:17,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-15 10:43:37] 2025-05-15 17:43:17,405 | INFO     | collected zombie processes
[2025-05-15 10:43:37] 2025-05-15 17:43:17,405 | INFO     | will attempt to kill all subprocesses of pid=1516935
[2025-05-15 10:43:37] 2025-05-15 17:43:17,532 | INFO     | process IDs to be killed: [1516935] (in reverse order)
[2025-05-15 10:43:37] 2025-05-15 17:43:17,583 | WARNING  | found no corresponding commands to process id(s)
[2025-05-15 10:43:37] 2025-05-15 17:43:17,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-15 10:43:37] 2025-05-15 17:43:17,589 | INFO     | did not find any defunct processes belonging to 1516935
[2025-05-15 10:43:37] 2025-05-15 17:43:17,594 | INFO     | did not find any defunct processes belonging to 1516935
[2025-05-15 10:43:37] 2025-05-15 17:43:17,594 | INFO     | ready for new job
[2025-05-15 10:43:37] 2025-05-15 17:43:17,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-15 10:43:37] 2025-05-15 17:43:17,596 | INFO     | **************************************
[2025-05-15 10:43:37] 2025-05-15 17:43:17,596 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-15 10:43:37] 2025-05-15 17:43:17,596 | INFO     | **************************************
[2025-05-15 10:43:37] 2025-05-15 17:43:17,596 | INFO     | 
[2025-05-15 10:43:37] 2025-05-15 17:43:17,598 | INFO     | architecture information:
[2025-05-15 10:43:37] 2025-05-15 17:43:17,598 | INFO     | executing command: cat /etc/os-release
[2025-05-15 10:43:37] 2025-05-15 17:43:17,608 | INFO     | cat /etc/os-release:
[2025-05-15 10:43:37] NAME="CentOS Linux"
[2025-05-15 10:43:37] VERSION="7 (Core)"
[2025-05-15 10:43:37] ID="centos"
[2025-05-15 10:43:37] ID_LIKE="rhel fedora"
[2025-05-15 10:43:37] VERSION_ID="7"
[2025-05-15 10:43:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-15 10:43:37] ANSI_COLOR="0;31"
[2025-05-15 10:43:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-15 10:43:37] HOME_URL="https://www.centos.org/"
[2025-05-15 10:43:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-15 10:43:37] 
[2025-05-15 10:43:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-15 10:43:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-15 10:43:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-15 10:43:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-15 10:43:37] 
[2025-05-15 10:43:37] 2025-05-15 17:43:17,609 | INFO     | **************************************
[2025-05-15 10:43:37] 2025-05-15 17:43:18,111 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-15 10:43:37] 2025-05-15 17:43:18,123 | INFO     | sufficient remaining disk space (1878487203840 B)
[2025-05-15 10:43:37] 2025-05-15 17:43:18,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-15 10:43:37] 2025-05-15 17:43:18,123 | INFO     | current server update state: UPDATING_FINAL
[2025-05-15 10:43:37] 2025-05-15 17:43:18,123 | INFO     | update_server=False
[2025-05-15 10:43:37] 2025-05-15 17:43:18,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-15 10:43:37] 2025-05-15 17:43:18,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-15 10:43:37] 2025-05-15 17:43:18,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-15 10:43:37] 2025-05-15 17:43:18,124 | INFO     | aborting loop
[2025-05-15 10:43:37] 2025-05-15 17:43:18,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-15 10:43:37] 2025-05-15 17:43:18,432 | INFO     | all payload control threads have been joined
[2025-05-15 10:43:37] 2025-05-15 17:43:18,644 | INFO     | all data control threads have been joined
[2025-05-15 10:43:37] 2025-05-15 17:43:19,123 | INFO     | found 0 job(s) in 20 queues
[2025-05-15 10:43:37] 2025-05-15 17:43:19,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-15 10:43:37] 2025-05-15 17:43:19,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-15 10:43:37] 2025-05-15 17:43:19,128 | INFO     | [job] retrieve thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:19,129 | INFO     | [job] job monitor thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:19,338 | INFO     | [payload] failed_post thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:19,347 | INFO     | [job] create_data_payload thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:19,355 | INFO     | all job control threads have been joined
[2025-05-15 10:43:37] 2025-05-15 17:43:19,437 | INFO     | [payload] control thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:19,540 | INFO     | [payload] validate_pre thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:19,623 | INFO     | [data] copytool_in thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:19,649 | INFO     | [data] control thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:19,724 | INFO     | [payload] validate_post thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:19,903 | INFO     | [job] validate thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:20,129 | INFO     | [data] copytool_out thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:20,360 | INFO     | [job] control thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:20,400 | INFO     | [payload] execute_payloads thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:21,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-15 10:43:37] 2025-05-15 17:43:22,117 | INFO     | [job] queue monitor thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:22,251 | INFO     | [data] queue_monitor thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:29,117 | INFO     | job.realtimelogging is not enabled
[2025-05-15 10:43:37] 2025-05-15 17:43:30,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-15 10:43:37] 2025-05-15 17:43:32,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140358680233792)>', '<ExcThread(monitor, started 140357912225536)>']
[2025-05-15 10:43:37] 2025-05-15 17:43:32,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-15 10:43:37] 2025-05-15 17:43:32,177 | INFO     | [monitor] control thread has ended
[2025-05-15 10:43:37] 2025-05-15 17:43:37,036 | INFO     | all workflow threads have been joined
[2025-05-15 10:43:37] 2025-05-15 17:43:37,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-15 10:43:37] 2025-05-15 17:43:37,036 | INFO     | traces error code: 0
[2025-05-15 10:43:37] 2025-05-15 17:43:37,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-15 10:43:37] 2025-05-15 17:43:37,150 [wrapper] ==== pilot stdout END ====
[2025-05-15 10:43:37] 2025-05-15 17:43:37,152 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-15 10:43:37] 2025-05-15 17:43:37,154 [wrapper] pilotpid: 1510586
[2025-05-15 10:43:37] 2025-05-15 17:43:37,155 [wrapper] Pilot exit status: 0
[2025-05-15 10:43:37] 2025-05-15 17:43:37,162 [wrapper] pandaids: 6649929226
[2025-05-15 10:43:37] 2025-05-15 17:43:37,194 [wrapper] cleanup supervisor_pilot 1846260 1510587
[2025-05-15 10:43:37] 2025-05-15 17:43:37,196 [wrapper] Test setup, not cleaning
[2025-05-15 10:43:37] 2025-05-15 17:43:37,198 [wrapper] apfmon messages muted
[2025-05-15 10:43:37] 2025-05-15 17:43:37,200 [wrapper] ==== wrapper stdout END ====
[2025-05-15 10:43:37] 2025-05-15 17:43:37,202 [wrapper] ==== wrapper stderr END ====
[2025-05-15 10:43:37]  *** Error codes and diagnostics ***
[2025-05-15 10:43:37]     "exeErrorCode": 0,
[2025-05-15 10:43:37]     "exeErrorDiag": "",
[2025-05-15 10:43:37]     "pilotErrorCode": 0,
[2025-05-15 10:43:37]     "pilotErrorDiag": "",
[2025-05-15 10:43:37]  *** Listing of results directory ***
[2025-05-15 10:43:37] total 419888
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc    495897 May 14 05:37 pilot3.tar.gz
[2025-05-15 10:43:37] -rwx------. 1 boinc boinc     37140 May 14 06:32 runpilot2-wrapper.sh
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc      5111 May 14 06:33 queuedata.json
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc       100 May 15 09:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-15 10:43:37] -rwxr-xr-x. 1 boinc boinc      7986 May 15 09:27 run_atlas
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc       105 May 15 09:27 job.xml
[2025-05-15 10:43:37] -rw-r--r--. 2 boinc boinc 224127701 May 15 09:27 EVNT.44638096._000155.pool.root.1
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc      6602 May 15 09:27 init_data.xml
[2025-05-15 10:43:37] drwxrwx--x. 2 boinc boinc      4096 May 15 09:27 shared
[2025-05-15 10:43:37] -rw-r--r--. 2 boinc boinc    508881 May 15 09:27 input.tar.gz
[2025-05-15 10:43:37] -rw-r--r--. 2 boinc boinc     17569 May 15 09:27 start_atlas.sh
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc         0 May 15 09:27 boinc_lockfile
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc      2538 May 15 09:27 pandaJob.out
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc       424 May 15 09:27 setup.sh.local
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc    995903 May 15 09:28 agis_schedconf.cvmfs.json
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc   1596741 May 15 09:28 agis_ddmendpoints.agis.ALL.json
[2025-05-15 10:43:37] drwx------. 4 boinc boinc      4096 May 15 09:28 pilot3
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc        95 May 15 10:42 pilot_heartbeat.json
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc 200384800 May 15 10:42 HITS.44638099._003859.pool.root.1
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc       529 May 15 10:42 boinc_task_state.xml
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc      1044 May 15 10:43 memory_monitor_summary.json
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc    356987 May 15 10:43 log.44638099._003859.job.log.tgz.1
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc      7728 May 15 10:43 heartbeat.json
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc      8192 May 15 10:43 boinc_mmap_file
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc        27 May 15 10:43 wrapper_checkpoint.txt
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc      4424 May 15 10:43 pilotlog.txt
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc    445320 May 15 10:43 log.44638099._003859.job.log.1
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc       357 May 15 10:43 output.list
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc       620 May 15 10:43 runtime_log
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc    819200 May 15 10:43 result.tar.gz
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc       660 May 15 10:43 ufoKDmgORZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3oFKDmMExqim.diag
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc     10979 May 15 10:43 runtime_log.err
[2025-05-15 10:43:37] -rw-r--r--. 1 boinc boinc     21275 May 15 10:43 stderr.txt
[2025-05-15 10:43:37] HITS file was successfully produced:
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc 200384800 May 15 10:42 shared/HITS.pool.root.1
[2025-05-15 10:43:37]  *** Contents of shared directory: ***
[2025-05-15 10:43:37] total 415896
[2025-05-15 10:43:37] -rw-r--r--. 2 boinc boinc 224127701 May 15 09:27 ATLAS.root_0
[2025-05-15 10:43:37] -rw-r--r--. 2 boinc boinc    508881 May 15 09:27 input.tar.gz
[2025-05-15 10:43:37] -rw-r--r--. 2 boinc boinc     17569 May 15 09:27 start_atlas.sh
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc 200384800 May 15 10:42 HITS.pool.root.1
[2025-05-15 10:43:37] -rw-------. 1 boinc boinc    819200 May 15 10:43 result.tar.gz
10:43:38 (1507000): run_atlas exited; CPU time 33975.881264
10:43:38 (1507000): called boinc_finish(0)

</stderr_txt>
]]>

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