Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-16 04:04:18 (8328): Detected: vboxwrapper 26206
2025-05-16 04:04:18 (8328): Detected: BOINC client v8.0.2
2025-05-16 04:04:18 (8328): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-16 04:04:18 (8328): Successfully copied 'init_data.xml' to the shared directory.
2025-05-16 04:04:19 (8328): Create VM. (boinc_fbb1889176947584, slot#2)
2025-05-16 04:04:19 (8328): Setting Memory Size for VM. (4400MB)
2025-05-16 04:04:20 (8328): Setting CPU Count for VM. (4)
2025-05-16 04:04:20 (8328): Setting Chipset Options for VM.
2025-05-16 04:04:20 (8328): Setting Graphics Controller Options for VM.
2025-05-16 04:04:21 (8328): Setting Boot Options for VM.
2025-05-16 04:04:21 (8328): Setting Network Configuration for NAT.
2025-05-16 04:04:21 (8328): Enabling VM Network Access.
2025-05-16 04:04:21 (8328): Disabling USB Support for VM.
2025-05-16 04:04:22 (8328): Disabling COM Port Support for VM.
2025-05-16 04:04:22 (8328): Disabling LPT Port Support for VM.
2025-05-16 04:04:22 (8328): Disabling Audio Support for VM.
2025-05-16 04:04:22 (8328): Disabling Clipboard Support for VM.
2025-05-16 04:04:23 (8328): Disabling Drag and Drop Support for VM.
2025-05-16 04:04:23 (8328): Adding storage controller(s) to VM.
2025-05-16 04:04:23 (8328): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-16 04:04:24 (8328): Adding VirtualBox Guest Additions to VM.
2025-05-16 04:04:24 (8328): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-16 04:04:24 (8328): forwarding host port 56520 to guest port 80
2025-05-16 04:04:24 (8328): Enabling remote desktop for VM.
2025-05-16 04:04:25 (8328): Required extension pack not installed, remote desktop not enabled.
2025-05-16 04:04:25 (8328): Enabling shared directory for VM.
2025-05-16 04:04:25 (8328): Starting VM using VBoxManage interface. (boinc_fbb1889176947584, slot#2)
2025-05-16 04:04:29 (8328): Successfully started VM. (PID = '7900')
2025-05-16 04:04:29 (8328): Reporting VM Process ID to BOINC.
2025-05-16 04:04:29 (8328): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-16 04:04:29 (8328): Guest Log: CPUID EDX: 0x178bfbff
2025-05-16 04:04:29 (8328): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-16 04:04:29 (8328): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-16 04:04:29 (8328): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-16 04:04:29 (8328): Detected: Web Application Enabled (http://localhost:56520)
2025-05-16 04:04:29 (8328): Preference change detected
2025-05-16 04:04:29 (8328): Setting CPU throttle for VM. (100%)
2025-05-16 04:04:30 (8328): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 480 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-16 04:04:31 (8328): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-16 04:04:31 (8328): Guest Log: BIOS: Booting from Hard Disk...
2025-05-16 04:04:34 (8328): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-16 04:04:34 (8328): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-16 04:04:34 (8328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-16 04:04:38 (8328): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-16 04:04:38 (8328): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-16 04:04:42 (8328): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-16 04:04:42 (8328): Guest Log: 00:00:00.000106 main     Log opened 2025-05-16T04:04:40.130845000Z
2025-05-16 04:04:42 (8328): Guest Log: 00:00:00.000180 main     OS Product: Linux
2025-05-16 04:04:42 (8328): Guest Log: 00:00:00.000201 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-16 04:04:42 (8328): Guest Log: 00:00:00.000217 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-16 04:04:42 (8328): Guest Log: 00:00:00.000233 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-16 04:04:42 (8328): Guest Log: 00:00:00.000234 main     Process ID: 1305
2025-05-16 04:04:42 (8328): Guest Log: 00:00:00.000234 main     Package type: LINUX_64BITS_GENERIC
2025-05-16 04:04:42 (8328): Guest Log: 00:00:00.000842 main     5.2.32 r132073 started. Verbose level = 0
2025-05-16 04:04:42 (8328): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-16 04:04:42 (8328): Guest Log: [INFO] Mounting shared directory
2025-05-16 04:04:42 (8328): Guest Log: [INFO] Checking for init_data.xml
2025-05-16 04:04:50 (8328): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-16 04:04:50 (8328): Guest Log: [INFO] Detected branch: prod
2025-05-16 04:04:50 (8328): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-16 04:04:50 (8328): Guest Log: Copying input files
2025-05-16 04:04:51 (8328): Guest Log: Copied input files into RunAtlas.
2025-05-16 04:04:51 (8328): Guest Log: Detected user-configured HTTP proxy at http://treacle:3128 - will set in /etc/cvmfs/default.local
2025-05-16 04:04:52 (8328): Guest Log: 00:00:10.002410 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 980 786 000ns (GuestNow=1 747 364 692 151 669 000 ns GuestLast=1 747 368 280 132 455 000 ns fSetTimeLastLoop=true )
2025-05-16 04:05:06 (8328): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-16 04:05:06 (8328): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-16 04:05:06 (8328): Guest Log: 2.6.3.0 1582 0 29596 146049 4 1 3117515 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.15:3128 1
2025-05-16 04:05:06 (8328): Guest Log: copied the webapp to /var/www
2025-05-16 04:05:06 (8328): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-16 04:05:06 (8328): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-16 04:05:06 (8328): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-16 04:05:06 (8328): Guest Log:  *** Starting ATLAS job. (PandaID=6650085385 taskID=44638099) ***
2025-05-16 06:01:21 (8328): Status Report: Elapsed Time: '6000.000000'
2025-05-16 06:01:21 (8328): Status Report: CPU Time: '17067.593750'
2025-05-16 06:16:29 (8328): Guest Log:  *** Job finished ***
2025-05-16 06:16:29 (8328): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:20,332 | INFO     | [job] control thread has finished
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:21,559 | INFO     | [data] copytool_out thread has finished
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:22,062 | INFO     | [data] queue_monitor thread has finished
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:24,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414823212864)>', '<ExcThread(monitor, started 140413990057728)>']
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:24,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:24,790 | INFO     | [monitor] control thread has ended
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,068 | INFO     | all workflow threads have been joined
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,068 | INFO     | end of generic workflow (traces error code: 0)
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,069 | INFO     | traces error code: 0
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,116 [wrapper] ==== pilot stdout END ====
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,118 [wrapper] ==== wrapper stdout RESUME ====
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,120 [wrapper] pilotpid: 6084
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,123 [wrapper] Pilot exit status: 0
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,166 [wrapper] pandaids: 6650085385
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,184 [wrapper] cleanup supervisor_pilot  4281 6085
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,186 [wrapper] Test setup, not cleaning
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,189 [wrapper] apfmon messages muted
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,192 [wrapper] ==== wrapper stdout END ====
2025-05-16 06:16:29 (8328): Guest Log: 2025-05-16 05:16:29,194 [wrapper] ==== wrapper stderr END ====
2025-05-16 06:16:29 (8328): Guest Log:  *** Error codes and diagnostics ***
2025-05-16 06:16:29 (8328): Guest Log:     "exeErrorCode": 0,
2025-05-16 06:16:29 (8328): Guest Log:     "exeErrorDiag": "",
2025-05-16 06:16:29 (8328): Guest Log:     "pilotErrorCode": 0,
2025-05-16 06:16:29 (8328): Guest Log:     "pilotErrorDiag": "",
2025-05-16 06:16:29 (8328): Guest Log:  *** Listing of results directory ***
2025-05-16 06:16:29 (8328): Guest Log: total 198232
2025-05-16 06:16:29 (8328): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 15 00:41 pilot3.tar.gz
2025-05-16 06:16:29 (8328): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 15 00:45 queuedata.json
2025-05-16 06:16:29 (8328): Guest Log: -rwx------. 1 atlas atlas     37140 May 15 00:46 runpilot2-wrapper.sh
2025-05-16 06:16:29 (8328): Guest Log: -rwxr-xr-x. 1 atlas atlas      9293 May 16 03:04 init_data.xml
2025-05-16 06:16:29 (8328): Guest Log: -rwxr-xr-x. 1 atlas atlas    508875 May 16 03:04 input.tar.gz
2025-05-16 06:16:29 (8328): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May 16 03:04 start_atlas.sh
2025-05-16 06:16:29 (8328): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 16 03:04 EVNT.44638096._001126.pool.root.1 -> /data/./ATLAS.root_0
2025-05-16 06:16:29 (8328): Guest Log: -rw-r--r--. 1 atlas atlas      2539 May 16 03:05 pandaJob.out
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas       454 May 16 03:07 setup.sh.local
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas    995903 May 16 03:17 agis_schedconf.cvmfs.json
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas   1596741 May 16 03:17 agis_ddmendpoints.agis.ALL.json
2025-05-16 06:16:29 (8328): Guest Log: drwx------. 4 atlas atlas      4096 May 16 03:17 pilot3
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas 197448430 May 16 05:14 HITS.44638099._015742.pool.root.1
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas      1041 May 16 05:14 memory_monitor_summary.json
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas    263728 May 16 05:14 log.44638099._015742.job.log.tgz.1
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas        95 May 16 05:15 pilot_heartbeat.json
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas      7680 May 16 05:16 heartbeat.json
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas      4599 May 16 05:16 pilotlog.txt
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas    616306 May 16 05:16 log.44638099._015742.job.log.1
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas       357 May 16 05:16 output.list
2025-05-16 06:16:29 (8328): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 16 05:16 runtime_log
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas    901120 May 16 05:16 result.tar.gz
2025-05-16 06:16:29 (8328): Guest Log: -rw-r--r--. 1 atlas atlas     11291 May 16 05:16 runtime_log.err
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas       664 May 16 05:16 BR4MDmUvbZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmksHKDmweA1xn.diag
2025-05-16 06:16:29 (8328): Guest Log: Looking for outputfile HITS.44638099._015742.pool.root.1
2025-05-16 06:16:29 (8328): Guest Log: HITS file was successfully produced
2025-05-16 06:16:29 (8328): Guest Log: -rw-------. 1 atlas atlas 197448430 May 16 05:14 /home/atlas/RunAtlas/HITS.44638099._015742.pool.root.1
2025-05-16 06:16:30 (8328): Guest Log: Successfully finished the ATLAS job!
2025-05-16 06:16:30 (8328): Guest Log: Copying the results back to the shared directory!
2025-05-16 06:16:30 (8328): Guest Log:  *** Contents of shared directory: ***
2025-05-16 06:16:30 (8328): Guest Log: total 411996
2025-05-16 06:16:30 (8328): Guest Log: -rwxrwxrwx. 1 root root 222983926 May 16 03:04 ATLAS.root_0
2025-05-16 06:16:30 (8328): Guest Log: -rwxrwxrwx. 1 root root 197448430 May 16 05:16 HITS.pool.root.1
2025-05-16 06:16:30 (8328): Guest Log: -rwxrwxrwx. 1 root root      9293 May 16 03:04 init_data.xml
2025-05-16 06:16:30 (8328): Guest Log: -rwxrwxrwx. 1 root root    508875 May 15 05:53 input.tar.gz
2025-05-16 06:16:30 (8328): Guest Log: -rwxrwxrwx. 1 root root    901120 May 16 05:16 result.tar.gz
2025-05-16 06:16:30 (8328): Guest Log: -rwxrwxrwx. 1 root root     17569 May 15 05:53 start_atlas.sh
2025-05-16 06:16:30 (8328): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-16 06:16:30 (8328): VM Completion File Detected.
2025-05-16 06:16:30 (8328): Powering off VM.
2025-05-16 06:16:31 (8328): Successfully stopped VM.
2025-05-16 06:16:31 (8328): Deregistering VM. (boinc_fbb1889176947584, slot#2)
2025-05-16 06:16:31 (8328): Removing network bandwidth throttle group from VM.
2025-05-16 06:16:31 (8328): Removing VM from VirtualBox.
06:16:36 (8328): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN