Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:11:17 (343808): wrapper (7.7.26015): starting
13:11:17 (343808): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 13:11:17] Arguments: --nthreads 4
[2025-05-16 13:11:17] Threads: 4
[2025-05-16 13:11:17] Checking for CVMFS
[2025-05-16 13:11:17] No cvmfs_config command found, will try listing directly
[2025-05-16 13:11:17] CVMFS is ok
[2025-05-16 13:11:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 13:11:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 13:11:17] Further information can be found at the LHC@home message board.
[2025-05-16 13:11:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 13:11:17] Checking for apptainer binary...
[2025-05-16 13:11:17] which: no apptainer in ((null))
[2025-05-16 13:11:17] apptainer is not installed, using version from CVMFS
[2025-05-16 13:11:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 13:11:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot4/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-05-16 13:11:17] apptainer works
[2025-05-16 13:11:17] Set ATHENA_PROC_NUMBER=4
[2025-05-16 13:11:17] Set ATHENA_CORE_NUMBER=4
[2025-05-16 13:11:17] Starting ATLAS job with PandaID=6650088958
[2025-05-16 13:11:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot4/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 13:25:08]  *** The last 200 lines of the pilot log: ***
[2025-05-16 13:25:08] 2025-05-16 11:24:55,433 | INFO     | extracted standard info from prmon json
[2025-05-16 13:25:08] 2025-05-16 11:24:55,433 | INFO     | extracted standard memory fields from prmon json
[2025-05-16 13:25:08] 2025-05-16 11:24:55,434 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-16 13:25:08] 2025-05-16 11:24:55,434 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-16 13:25:08] 2025-05-16 11:24:55,434 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | WARNING  | wrong length of table data, x=[1747394054.0, 1747394115.0, 1747394176.0, 1747394237.0, 1747394298.0, 1747394359.0], y=[687.0, 736152.0, 831418.0, 831517.0, 831501.
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | ..............................
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | . Timing measurements:
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | . get job = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | . initial setup = 21 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . payload setup = 6 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . stage-in = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . payload execution = 325 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . stage-out = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . log creation = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | ..............................
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot4/slots/1/PanDA_Pilot-6650088958/pilotlog.txt
[2025-05-16 13:25:08] 2025-05-16 11:24:55,449 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-16 13:25:08] - Log from pilotlog.txt -
[2025-05-16 13:25:08] 2025-05-16 11:24:55,432 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-16 13:25:08] 2025-05-16 11:24:55,433 | INFO     | using path: /scratch/boinc/var/slot4/slots/1/PanDA_Pilot-6650088958/memory_monitor_summary.json (trf name=prmon)
[2025-05-16 13:25:08] 2025-05-16 11:24:55,433 | INFO     | extracted standard info from prmon json
[2025-05-16 13:25:08] 2025-05-16 11:24:55,433 | INFO     | extracted standard memory fields from prmon json
[2025-05-16 13:25:08] 2025-05-16 11:24:55,434 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-16 13:25:08] 2025-05-16 11:24:55,434 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-16 13:25:08] 2025-05-16 11:24:55,434 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | WARNING  | wrong length of table data, x=[1747394054.0, 1747394115.0, 1747394176.0, 1747394237.0, 1747394298.0, 1747394359.0], y=[687.0, 736152.0, 831418.0, 831517.0, 831501.
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | ..............................
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | . Timing measurements:
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | . get job = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | . initial setup = 21 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . payload setup = 6 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . stage-in = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . payload execution = 325 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . stage-out = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . log creation = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | ..............................
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot4/slots/1/PanDA_Pilot-6650088958/pilotlog.txt
[2025-05-16 13:25:08] 2025-05-16 11:24:55,450 | WARNING  | 
[2025-05-16 13:25:08] [begin log extracts]
[2025-05-16 13:25:08] - Log from pilotlog.txt -
[2025-05-16 13:25:08] 2025-05-16 11:24:55,432 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-16 13:25:08] 2025-05-16 11:24:55,433 | INFO     | using path: /scratch/boinc/var/slot4/slots/1/PanDA_Pilot-6650088958/memory_monitor_summary.json (trf name=prmon)
[2025-05-16 13:25:08] 2025-05-16 11:24:55,433 | INFO     | extracted standard info from prmon json
[2025-05-16 13:25:08] 2025-05-16 11:24:55,433 | INFO     | extracted standard memory fields from prmon json
[2025-05-16 13:25:08] 2025-05-16 11:24:55,434 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-16 13:25:08] 2025-05-16 11:24:55,434 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-16 13:25:08] 2025-05-16 11:24:55,434 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | WARNING  | wrong length of table data, x=[1747394054.0, 1747394115.0, 1747394176.0, 1747394237.0, 1747394298.0, 1747394359.0], y=[687.0, 736152.0, 831418.0, 831517.0, 831501.
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | ..............................
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | . Timing measurements:
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | . get job = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,435 | INFO     | . initial setup = 21 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . payload setup = 6 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . stage-in = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . payload execution = 325 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . stage-out = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | . log creation = 0 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | ..............................
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-16 13:25:08] 2025-05-16 11:24:55,436 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot4/slots/1/PanDA_Pilot-6650088958/pilotlog.txt
[2025-05-16 13:25:08] [end log extracts]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,450 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-16 13:25:08] 2025-05-16 11:24:55,451 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-16 13:25:08] 2025-05-16 11:24:55,551 | INFO     | 
[2025-05-16 13:25:08] 2025-05-16 11:24:55,551 | INFO     | job summary report
[2025-05-16 13:25:08] 2025-05-16 11:24:55,551 | INFO     | --------------------------------------------------
[2025-05-16 13:25:08] 2025-05-16 11:24:55,551 | INFO     | PanDA job id: 6650088958
[2025-05-16 13:25:08] 2025-05-16 11:24:55,551 | INFO     | task id: 44638099
[2025-05-16 13:25:08] 2025-05-16 11:24:55,551 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-16 13:19:30,915 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-16 13:25:08] 2025-05-16 11:24:55,551 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | pilot state: failed 
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | transexitcode: 65
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | exeerrorcode: 65
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "DetectorStore_Impl                                               FATAL in
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | exitcode: 65
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "DetectorStore_Impl                                               FATAL in sysI
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | cpuconsumptiontime: 52 s
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | nevents: 0
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | neventsw: 0
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | pid: 375766
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | pgrp: 375766
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | corecount: 4
[2025-05-16 13:25:08] 2025-05-16 11:24:55,552 | INFO     | event service: False
[2025-05-16 13:25:08] 2025-05-16 11:24:55,553 | INFO     | sizes: {0: 2393721, 4: 2393927, 11: 2393955, 531: 2423171, 532: 2427475, 652: 2427589}
[2025-05-16 13:25:08] 2025-05-16 11:24:55,553 | INFO     | --------------------------------------------------
[2025-05-16 13:25:08] 2025-05-16 11:24:55,553 | INFO     | 
[2025-05-16 13:25:08] 2025-05-16 11:24:55,553 | INFO     | executing command: ls -lF /scratch/boinc/var/slot4/slots/1
[2025-05-16 13:25:08] 2025-05-16 11:24:55,571 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,572 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,572 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,572 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,572 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,574 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 13:25:08] 2025-05-16 11:24:55,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,574 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 13:25:08] 2025-05-16 11:24:55,574 | INFO     | job 6650088958 has completed (purged errors)
[2025-05-16 13:25:08] 2025-05-16 11:24:55,574 | INFO     | overall cleanup function is called
[2025-05-16 13:25:08] 2025-05-16 11:24:56,581 | INFO     | --- collectZombieJob: --- 10, [375766]
[2025-05-16 13:25:08] 2025-05-16 11:24:56,581 | INFO     | zombie collector waiting for pid 375766
[2025-05-16 13:25:08] 2025-05-16 11:24:56,581 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 13:25:08] 2025-05-16 11:24:56,581 | INFO     | collected zombie processes
[2025-05-16 13:25:08] 2025-05-16 11:24:56,581 | INFO     | will attempt to kill all subprocesses of pid=375766
[2025-05-16 13:25:08] 2025-05-16 11:24:56,776 | INFO     | process IDs to be killed: [375766] (in reverse order)
[2025-05-16 13:25:08] 2025-05-16 11:24:56,874 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 13:25:08] 2025-05-16 11:24:56,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 13:25:08] 2025-05-16 11:24:56,883 | INFO     | did not find any defunct processes belonging to 375766
[2025-05-16 13:25:08] 2025-05-16 11:24:56,892 | INFO     | did not find any defunct processes belonging to 375766
[2025-05-16 13:25:08] 2025-05-16 11:24:56,892 | INFO     | ready for new job
[2025-05-16 13:25:08] 2025-05-16 11:24:56,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 13:25:08] 2025-05-16 11:24:56,894 | INFO     | **************************************
[2025-05-16 13:25:08] 2025-05-16 11:24:56,894 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 13:25:08] 2025-05-16 11:24:56,894 | INFO     | **************************************
[2025-05-16 13:25:08] 2025-05-16 11:24:56,894 | INFO     | 
[2025-05-16 13:25:08] 2025-05-16 11:24:56,898 | INFO     | architecture information:
[2025-05-16 13:25:08] 2025-05-16 11:24:56,898 | INFO     | executing command: cat /etc/os-release
[2025-05-16 13:25:08] 2025-05-16 11:24:56,911 | INFO     | cat /etc/os-release:
[2025-05-16 13:25:08] NAME="CentOS Linux"
[2025-05-16 13:25:08] VERSION="7 (Core)"
[2025-05-16 13:25:08] ID="centos"
[2025-05-16 13:25:08] ID_LIKE="rhel fedora"
[2025-05-16 13:25:08] VERSION_ID="7"
[2025-05-16 13:25:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 13:25:08] ANSI_COLOR="0;31"
[2025-05-16 13:25:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 13:25:08] HOME_URL="https://www.centos.org/"
[2025-05-16 13:25:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 13:25:08] 
[2025-05-16 13:25:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 13:25:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 13:25:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 13:25:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 13:25:08] 
[2025-05-16 13:25:08] 2025-05-16 11:24:56,911 | INFO     | **************************************
[2025-05-16 13:25:08] 2025-05-16 11:24:57,414 | INFO     | executing command: df -mP /scratch/boinc/var/slot4/slots/1
[2025-05-16 13:25:08] 2025-05-16 11:24:57,429 | INFO     | sufficient remaining disk space (703924797440 B)
[2025-05-16 13:25:08] 2025-05-16 11:24:57,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 13:25:08] 2025-05-16 11:24:57,430 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 13:25:08] 2025-05-16 11:24:57,430 | INFO     | update_server=False
[2025-05-16 13:25:08] 2025-05-16 11:24:57,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 13:25:08] 2025-05-16 11:24:57,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 13:25:08] 2025-05-16 11:24:57,739 | INFO     | all payload control threads have been joined
[2025-05-16 13:25:08] 2025-05-16 11:24:58,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 13:25:08] 2025-05-16 11:24:58,032 | INFO     | aborting loop
[2025-05-16 13:25:08] 2025-05-16 11:24:58,036 | INFO     | all data control threads have been joined
[2025-05-16 13:25:08] 2025-05-16 11:24:58,432 | INFO     | [job] retrieve thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:58,435 | INFO     | [job] queue monitor thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:58,492 | INFO     | all job control threads have been joined
[2025-05-16 13:25:08] 2025-05-16 11:24:58,548 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:58,579 | INFO     | PID=354941 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-16 13:25:08] 2025-05-16 11:24:58,580 | INFO     | .. there are 14 such processes running
[2025-05-16 13:25:08] 2025-05-16 11:24:58,580 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 13:25:08] 2025-05-16 11:24:58,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 13:25:08] 2025-05-16 11:24:58,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 13:25:08] 2025-05-16 11:24:58,705 | INFO     | [payload] validate_post thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:58,745 | INFO     | [payload] control thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:58,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 13:25:08] 2025-05-16 11:24:58,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 13:25:08] 2025-05-16 11:24:59,037 | INFO     | [data] control thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:59,037 | INFO     | [job] job monitor thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:59,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:59,434 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:59,497 | INFO     | [job] control thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:59,640 | INFO     | [job] validate thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:59,648 | INFO     | [data] copytool_in thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:59,758 | INFO     | [payload] failed_post thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:24:59,860 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:25:00,872 | INFO     | [data] copytool_out thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:25:02,910 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 13:25:08] 2025-05-16 11:25:03,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22605936420672)>', '<ExcThread(monitor, started 22605478213376)>']
[2025-05-16 13:25:08] 2025-05-16 11:25:03,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 13:25:08] 2025-05-16 11:25:03,605 | INFO     | [monitor] control thread has ended
[2025-05-16 13:25:08] 2025-05-16 11:25:08,312 | INFO     | all workflow threads have been joined
[2025-05-16 13:25:08] 2025-05-16 11:25:08,312 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 13:25:08] 2025-05-16 11:25:08,312 | INFO     | traces error code: 0
[2025-05-16 13:25:08] 2025-05-16 11:25:08,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 13:25:08] 2025-05-16 11:25:08,456 [wrapper] ==== pilot stdout END ====
[2025-05-16 13:25:08] 2025-05-16 11:25:08,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 13:25:08] 2025-05-16 11:25:08,461 [wrapper] pilotpid: 354941
[2025-05-16 13:25:08] 2025-05-16 11:25:08,463 [wrapper] Pilot exit status: 0
[2025-05-16 13:25:08] 2025-05-16 11:25:08,472 [wrapper] pandaids: 6650088958
[2025-05-16 13:25:08] 2025-05-16 11:25:08,526 [wrapper] cleanup supervisor_pilot  354960 354943
[2025-05-16 13:25:08] 2025-05-16 11:25:08,529 [wrapper] Test setup, not cleaning
[2025-05-16 13:25:08] 2025-05-16 11:25:08,532 [wrapper] apfmon messages muted
[2025-05-16 13:25:08] 2025-05-16 11:25:08,534 [wrapper] ==== wrapper stdout END ====
[2025-05-16 13:25:08] 2025-05-16 11:25:08,537 [wrapper] ==== wrapper stderr END ====
[2025-05-16 13:25:08]  *** Error codes and diagnostics ***
[2025-05-16 13:25:08]     "exeErrorCode": 65,
[2025-05-16 13:25:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitialize(): standard std::exception is caught\"",
[2025-05-16 13:25:08]     "pilotErrorCode": 1305,
[2025-05-16 13:25:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitia",
[2025-05-16 13:25:08]  *** Listing of results directory ***
[2025-05-16 13:25:08] total 220952
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc    495897 May 15 03:35 pilot3.tar.gz
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc      5111 May 15 04:24 queuedata.json
[2025-05-16 13:25:08] -rwx------ 1 boinc boinc     37140 May 15 04:25 runpilot2-wrapper.sh
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc       100 May 16 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 13:25:08] -rwxr-xr-x 1 boinc boinc      7986 May 16 12:29 run_atlas
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc       105 May 16 12:29 job.xml
[2025-05-16 13:25:08] -rw-r--r-- 2 boinc boinc 222072610 May 16 13:11 EVNT.44638096._001297.pool.root.1
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc      6626 May 16 13:11 init_data.xml
[2025-05-16 13:25:08] -rw-r--r-- 2 boinc boinc     17569 May 16 13:11 start_atlas.sh
[2025-05-16 13:25:08] drwxrwx--x 2 boinc boinc      4096 May 16 13:11 shared
[2025-05-16 13:25:08] -rw-r--r-- 2 boinc boinc    508879 May 16 13:11 input.tar.gz
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc         0 May 16 13:11 boinc_lockfile
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc      2539 May 16 13:11 pandaJob.out
[2025-05-16 13:25:08] -rw------- 1 boinc boinc       424 May 16 13:11 setup.sh.local
[2025-05-16 13:25:08] -rw------- 1 boinc boinc    989800 May 16 13:13 agis_schedconf.cvmfs.json
[2025-05-16 13:25:08] -rw------- 1 boinc boinc   1596741 May 16 13:13 agis_ddmendpoints.agis.ALL.json
[2025-05-16 13:25:08] drwx------ 4 boinc boinc      4096 May 16 13:13 pilot3
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc       525 May 16 13:19 boinc_task_state.xml
[2025-05-16 13:25:08] -rw------- 1 boinc boinc      1005 May 16 13:19 memory_monitor_summary.json
[2025-05-16 13:25:08] -rw------- 1 boinc boinc     47685 May 16 13:22 log.44638099._016899.job.log.tgz.1
[2025-05-16 13:25:08] -rw------- 1 boinc boinc        95 May 16 13:24 pilot_heartbeat.json
[2025-05-16 13:25:08] -rw------- 1 boinc boinc     11755 May 16 13:24 heartbeat.json
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc      8192 May 16 13:25 boinc_mmap_file
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc        23 May 16 13:25 wrapper_checkpoint.txt
[2025-05-16 13:25:08] -rw------- 1 boinc boinc      4756 May 16 13:25 pilotlog.txt
[2025-05-16 13:25:08] -rw------- 1 boinc boinc    121526 May 16 13:25 log.44638099._016899.job.log.1
[2025-05-16 13:25:08] -rw------- 1 boinc boinc       188 May 16 13:25 output.list
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc       620 May 16 13:25 runtime_log
[2025-05-16 13:25:08] -rw------- 1 boinc boinc    194560 May 16 13:25 result.tar.gz
[2025-05-16 13:25:08] -rw------- 1 boinc boinc       650 May 16 13:25 uj1KDmTTdZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmI5HKDmKtcZOn.diag
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc     11251 May 16 13:25 runtime_log.err
[2025-05-16 13:25:08] -rw-r--r-- 1 boinc boinc     22250 May 16 13:25 stderr.txt
[2025-05-16 13:25:08] No HITS result produced
[2025-05-16 13:25:08]  *** Contents of shared directory: ***
[2025-05-16 13:25:08] total 217584
[2025-05-16 13:25:08] -rw-r--r-- 2 boinc boinc 222072610 May 16 13:11 ATLAS.root_0
[2025-05-16 13:25:08] -rw-r--r-- 2 boinc boinc     17569 May 16 13:11 start_atlas.sh
[2025-05-16 13:25:08] -rw-r--r-- 2 boinc boinc    508879 May 16 13:11 input.tar.gz
[2025-05-16 13:25:08] -rw------- 1 boinc boinc    194560 May 16 13:25 result.tar.gz
13:25:09 (343808): run_atlas exited; CPU time 65.544109
13:25:09 (343808): called boinc_finish(0)

</stderr_txt>
]]>

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