Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:14:43 (13736): wrapper (7.7.26015): starting
15:14:43 (13736): wrapper: running run_atlas (--nthreads 8)
[2025-05-15 15:14:43] Arguments: --nthreads 8
[2025-05-15 15:14:43] Threads: 8
[2025-05-15 15:14:43] Checking for CVMFS
[2025-05-15 15:14:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-15 15:14:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-15 15:14:44] Running cvmfs_config stat atlas.cern.ch
[2025-05-15 15:14:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-15 15:14:45] 2.11.2.0 19741 4443 77012 146028 2 59 13862416 25165825 4649 130560 0 4036210 99.703 5972647 1036 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-15 15:14:45] CVMFS is ok
[2025-05-15 15:14:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-15 15:14:45] Checking for apptainer binary...
[2025-05-15 15:14:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-15 15:14:45] Running /usr/bin/apptainer --version
[2025-05-15 15:14:45] apptainer version 1.3.2-1.el7
[2025-05-15 15:14:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-15 15:45:10] cg-vwn339.simple-grid.lan
[2025-05-15 15:45:10] apptainer works
[2025-05-15 15:45:10] Set ATHENA_PROC_NUMBER=8
[2025-05-15 15:45:10] Set ATHENA_CORE_NUMBER=8
[2025-05-15 15:45:10] Starting ATLAS job with PandaID=6650088657
[2025-05-15 15:45:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/33 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-15 21:23:30]  *** The last 200 lines of the pilot log: ***
[2025-05-15 21:23:30] 2025-05-15 18:55:35,307 | INFO     | mean y: 2402565.8506944445
[2025-05-15 21:23:30] 2025-05-15 18:55:35,307 | INFO     | -- intersect: -59765343085.72054
[2025-05-15 21:23:30] 2025-05-15 18:55:35,307 | INFO     | intersect: -59765343085.72054
[2025-05-15 21:23:30] 2025-05-15 18:55:35,314 | INFO     | chi2: 8.618298874729543
[2025-05-15 21:23:30] 2025-05-15 18:55:35,315 | INFO     | current chi2=8.618298874729543 (change=7.77032688315868 %)
[2025-05-15 21:23:30] 2025-05-15 18:55:35,315 | INFO     | right removable region: 287
[2025-05-15 21:23:30] 2025-05-15 18:55:35,315 | INFO     | sum of square deviations: 7407141672.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,318 | INFO     | sum of deviations: 139347389352.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,318 | INFO     | mean x: 1747326441.5
[2025-05-15 21:23:30] 2025-05-15 18:55:35,318 | INFO     | mean y: 2435471.361111111
[2025-05-15 21:23:30] 2025-05-15 18:55:35,318 | INFO     | -- intersect: -32869269803.178585
[2025-05-15 21:23:30] 2025-05-15 18:55:35,319 | INFO     | intersect: -32869269803.178585
[2025-05-15 21:23:30] 2025-05-15 18:55:35,319 | INFO     | chi2: 4.528607044866474
[2025-05-15 21:23:30] 2025-05-15 18:55:35,319 | INFO     | current chi2=4.528607044866474 (change=51.536613722302945 %)
[2025-05-15 21:23:30] 2025-05-15 18:55:35,320 | INFO     | sum of square deviations: 7028008982.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,322 | INFO     | sum of deviations: 71654013926.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,322 | INFO     | mean x: 1747326594.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,323 | INFO     | mean y: 2462667.5300353356
[2025-05-15 21:23:30] 2025-05-15 18:55:35,323 | INFO     | -- intersect: -17812392780.20965
[2025-05-15 21:23:30] 2025-05-15 18:55:35,323 | INFO     | intersect: -17812392780.20965
[2025-05-15 21:23:30] 2025-05-15 18:55:35,323 | INFO     | chi2: 2.440998154697002
[2025-05-15 21:23:30] 2025-05-15 18:55:35,323 | INFO     | current chi2=2.440998154697002 (change=46.09825647239449 %)
[2025-05-15 21:23:30] 2025-05-15 18:55:35,324 | INFO     | sum of square deviations: 6662039329.5
[2025-05-15 21:23:30] 2025-05-15 18:55:35,334 | INFO     | sum of deviations: 19845196490.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,334 | INFO     | mean x: 1747326746.5
[2025-05-15 21:23:30] 2025-05-15 18:55:35,334 | INFO     | mean y: 2484256.892086331
[2025-05-15 21:23:30] 2025-05-15 18:55:35,334 | INFO     | -- intersect: -5202534942.40577
[2025-05-15 21:23:30] 2025-05-15 18:55:35,334 | INFO     | intersect: -5202534942.40577
[2025-05-15 21:23:30] 2025-05-15 18:55:35,335 | INFO     | chi2: 1.2614784295067933
[2025-05-15 21:23:30] 2025-05-15 18:55:35,335 | INFO     | current chi2=1.2614784295067933 (change=48.32120511523373 %)
[2025-05-15 21:23:30] 2025-05-15 18:55:35,335 | INFO     | sum of square deviations: 6309000152.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,338 | INFO     | sum of deviations: -6798277858.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,338 | INFO     | mean x: 1747326899.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,338 | INFO     | mean y: 2495687.736263736
[2025-05-15 21:23:30] 2025-05-15 18:55:35,338 | INFO     | -- intersect: 1885331871.2785687
[2025-05-15 21:23:30] 2025-05-15 18:55:35,338 | INFO     | intersect: 1885331871.2785687
[2025-05-15 21:23:30] 2025-05-15 18:55:35,339 | INFO     | chi2: 0.8003860148283582
[2025-05-15 21:23:30] 2025-05-15 18:55:35,339 | INFO     | current chi2=0.8003860148283582 (change=36.55174784547927 %)
[2025-05-15 21:23:30] 2025-05-15 18:55:35,339 | INFO     | sum of square deviations: 5968658887.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,342 | INFO     | sum of deviations: -8140272093.500002
[2025-05-15 21:23:30] 2025-05-15 18:55:35,342 | INFO     | mean x: 1747327051.5
[2025-05-15 21:23:30] 2025-05-15 18:55:35,342 | INFO     | mean y: 2496296.6231343285
[2025-05-15 21:23:30] 2025-05-15 18:55:35,342 | INFO     | -- intersect: 2385563901.059864
[2025-05-15 21:23:30] 2025-05-15 18:55:35,342 | INFO     | intersect: 2385563901.059864
[2025-05-15 21:23:30] 2025-05-15 18:55:35,343 | INFO     | chi2: 0.7896054765701167
[2025-05-15 21:23:30] 2025-05-15 18:55:35,343 | INFO     | current chi2=0.7896054765701167 (change=1.3469173696836043 %)
[2025-05-15 21:23:30] 2025-05-15 18:55:35,343 | INFO     | left removable region: 50
[2025-05-15 21:23:30] 2025-05-15 18:55:35,344 | INFO     | sum of square deviations: 4127772278.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,346 | INFO     | sum of deviations: 2958219216.9999995
[2025-05-15 21:23:30] 2025-05-15 18:55:35,359 | INFO     | mean x: 1747327631.0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,359 | INFO     | mean y: 2507570.4852320673
[2025-05-15 21:23:30] 2025-05-15 18:55:35,360 | INFO     | -- intersect: -1249736455.6614263
[2025-05-15 21:23:30] 2025-05-15 18:55:35,360 | INFO     | intersect: -1249736455.6614263
[2025-05-15 21:23:30] 2025-05-15 18:55:35,360 | INFO     | chi2: 0.00044072263994941263
[2025-05-15 21:23:30] 2025-05-15 18:55:35,360 | INFO     | -- intersect: -1249736455.6614263
[2025-05-15 21:23:30] 2025-05-15 18:55:35,360 | INFO     | current memory leak: 0.72 B/s (using 237 data points, chi2=0.00)
[2025-05-15 21:23:30] 2025-05-15 18:55:35,361 | INFO     | ..............................
[2025-05-15 21:23:30] 2025-05-15 18:55:35,361 | INFO     | . Timing measurements:
[2025-05-15 21:23:30] 2025-05-15 18:55:35,361 | INFO     | . get job = 0 s
[2025-05-15 21:23:30] 2025-05-15 18:55:35,362 | INFO     | . initial setup = 11 s
[2025-05-15 21:23:30] 2025-05-15 18:55:35,362 | INFO     | . payload setup = 138 s
[2025-05-15 21:23:30] 2025-05-15 18:55:35,362 | INFO     | . stage-in = 0 s
[2025-05-15 21:23:30] 2025-05-15 18:55:35,362 | INFO     | . payload execution = 17995 s
[2025-05-15 21:23:30] 2025-05-15 18:55:35,362 | INFO     | . stage-out = 7 s
[2025-05-15 21:23:30] 2025-05-15 18:55:35,362 | INFO     | . log creation = 1 s
[2025-05-15 21:23:30] 2025-05-15 18:55:35,362 | INFO     | ..............................
[2025-05-15 21:23:30] 2025-05-15 18:55:35,523 | INFO     | 
[2025-05-15 21:23:30] 2025-05-15 18:55:35,523 | INFO     | job summary report
[2025-05-15 21:23:30] 2025-05-15 18:55:35,523 | INFO     | --------------------------------------------------
[2025-05-15 21:23:30] 2025-05-15 18:55:35,523 | INFO     | PanDA job id: 6650088657
[2025-05-15 21:23:30] 2025-05-15 18:55:35,523 | INFO     | task id: 44638099
[2025-05-15 21:23:30] 2025-05-15 18:55:35,524 | INFO     | errors: (none)
[2025-05-15 21:23:30] 2025-05-15 18:55:35,524 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-15 21:23:30] 2025-05-15 18:55:35,524 | INFO     | pilot state: finished 
[2025-05-15 21:23:30] 2025-05-15 18:55:35,524 | INFO     | transexitcode: 0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,524 | INFO     | exeerrorcode: 0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,524 | INFO     | exeerrordiag: 
[2025-05-15 21:23:30] 2025-05-15 18:55:35,524 | INFO     | exitcode: 0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,524 | INFO     | exitmsg: OK
[2025-05-15 21:23:30] 2025-05-15 18:55:35,524 | INFO     | cpuconsumptiontime: 66102 s
[2025-05-15 21:23:30] 2025-05-15 18:55:35,524 | INFO     | nevents: 400
[2025-05-15 21:23:30] 2025-05-15 18:55:35,525 | INFO     | neventsw: 0
[2025-05-15 21:23:30] 2025-05-15 18:55:35,525 | INFO     | pid: 11567
[2025-05-15 21:23:30] 2025-05-15 18:55:35,525 | INFO     | pgrp: 11567
[2025-05-15 21:23:30] 2025-05-15 18:55:35,525 | INFO     | corecount: 8
[2025-05-15 21:23:30] 2025-05-15 18:55:35,525 | INFO     | event service: False
[2025-05-15 21:23:30] 2025-05-15 18:55:35,525 | INFO     | sizes: {0: 2393490, 1: 2393689, 12: 2393689, 23: 2393717, 33: 2393745, 44: 2393801, 55: 2393957, 66: 2393985, 76: 2394013, 87: 2394069, 94: 2394303, 98: 2394611, 1
[2025-05-15 21:23:30] 2025-05-15 18:55:35,525 | INFO     | --------------------------------------------------
[2025-05-15 21:23:30] 2025-05-15 18:55:35,525 | INFO     | 
[2025-05-15 21:23:30] 2025-05-15 18:55:35,525 | INFO     | executing command: ls -lF /var/lib/boinc/slots/33
[2025-05-15 21:23:30] 2025-05-15 18:55:36,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-15 21:23:30] 2025-05-15 18:55:36,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,031 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-15 21:23:30] 2025-05-15 18:55:36,031 | INFO     | job 6650088657 has completed (purged errors)
[2025-05-15 21:23:30] 2025-05-15 18:55:36,031 | INFO     | overall cleanup function is called
[2025-05-15 21:23:30] 2025-05-15 18:55:37,039 | INFO     | --- collectZombieJob: --- 10, [11567]
[2025-05-15 21:23:30] 2025-05-15 18:55:37,039 | INFO     | zombie collector waiting for pid 11567
[2025-05-15 21:23:30] 2025-05-15 18:55:37,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-15 21:23:30] 2025-05-15 18:55:37,039 | INFO     | collected zombie processes
[2025-05-15 21:23:30] 2025-05-15 18:55:37,040 | INFO     | will attempt to kill all subprocesses of pid=11567
[2025-05-15 21:23:30] 2025-05-15 18:55:37,155 | INFO     | process IDs to be killed: [11567] (in reverse order)
[2025-05-15 21:23:30] 2025-05-15 18:55:38,262 | WARNING  | found no corresponding commands to process id(s)
[2025-05-15 21:23:30] 2025-05-15 18:55:38,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-15 21:23:30] 2025-05-15 18:55:38,265 | INFO     | did not find any defunct processes belonging to 11567
[2025-05-15 21:23:30] 2025-05-15 18:55:38,274 | INFO     | did not find any defunct processes belonging to 11567
[2025-05-15 21:23:30] 2025-05-15 18:55:38,274 | INFO     | ready for new job
[2025-05-15 21:23:30] 2025-05-15 18:55:38,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-15 21:23:30] 2025-05-15 18:55:38,276 | INFO     | **************************************
[2025-05-15 21:23:30] 2025-05-15 18:55:38,276 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-15 21:23:30] 2025-05-15 18:55:38,277 | INFO     | **************************************
[2025-05-15 21:23:30] 2025-05-15 18:55:38,277 | INFO     | 
[2025-05-15 21:23:30] 2025-05-15 18:55:38,277 | INFO     | pilot is running in a VM
[2025-05-15 21:23:30] 2025-05-15 18:55:38,277 | INFO     | architecture information:
[2025-05-15 21:23:30] 2025-05-15 18:55:38,285 | INFO     | executing command: cat /etc/os-release
[2025-05-15 21:23:30] 2025-05-15 18:55:38,505 | INFO     | cat /etc/os-release:
[2025-05-15 21:23:30] NAME="CentOS Linux"
[2025-05-15 21:23:30] VERSION="7 (Core)"
[2025-05-15 21:23:30] ID="centos"
[2025-05-15 21:23:30] ID_LIKE="rhel fedora"
[2025-05-15 21:23:30] VERSION_ID="7"
[2025-05-15 21:23:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-15 21:23:30] ANSI_COLOR="0;31"
[2025-05-15 21:23:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-15 21:23:30] HOME_URL="https://www.centos.org/"
[2025-05-15 21:23:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-15 21:23:30] 
[2025-05-15 21:23:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-15 21:23:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-15 21:23:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-15 21:23:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-15 21:23:30] 
[2025-05-15 21:23:30] 2025-05-15 18:55:38,506 | INFO     | **************************************
[2025-05-15 21:23:30] 2025-05-15 18:55:39,008 | INFO     | executing command: df -mP /var/lib/boinc/slots/33
[2025-05-15 21:23:30] 2025-05-15 18:55:39,223 | INFO     | sufficient remaining disk space (496340303872 B)
[2025-05-15 21:23:30] 2025-05-15 18:55:39,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-15 21:23:30] 2025-05-15 18:55:39,223 | INFO     | current server update state: UPDATING_FINAL
[2025-05-15 21:23:30] 2025-05-15 18:55:39,223 | INFO     | update_server=False
[2025-05-15 21:23:30] 2025-05-15 18:55:39,223 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-15 21:23:30] 2025-05-15 18:55:39,224 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-15 21:23:30] 2025-05-15 18:55:39,224 | INFO     | found 0 job(s) in 20 queues
[2025-05-15 21:23:30] 2025-05-15 18:55:39,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-15 21:23:30] 2025-05-15 18:55:39,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-15 21:23:30] 2025-05-15 18:55:39,399 | INFO     | all data control threads have been joined
[2025-05-15 21:23:30] 2025-05-15 18:55:39,750 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-15 21:23:30] 2025-05-15 18:55:40,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-15 21:23:30] 2025-05-15 18:55:40,007 | INFO     | aborting loop
[2025-05-15 21:23:30] 2025-05-15 18:55:40,229 | INFO     | [job] retrieve thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:40,365 | INFO     | [payload] validate_pre thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:40,405 | INFO     | [data] control thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:40,429 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:40,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-15 21:23:30] 2025-05-15 18:55:40,621 | INFO     | all payload control threads have been joined
[2025-05-15 21:23:30] 2025-05-15 18:55:40,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-15 21:23:30] 2025-05-15 18:55:40,669 | INFO     | [payload] failed_post thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:40,737 | INFO     | [payload] validate_post thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:40,745 | INFO     | all job control threads have been joined
[2025-05-15 21:23:30] 2025-05-15 18:55:41,013 | INFO     | [job] job monitor thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:41,184 | INFO     | [data] copytool_in thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:41,369 | INFO     | [job] create_data_payload thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:41,378 | INFO     | [job] validate thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:41,482 | INFO     | [payload] execute_payloads thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:41,545 | INFO     | [job] queue monitor thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:41,626 | INFO     | [payload] control thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:41,751 | INFO     | [job] control thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:41,757 | INFO     | [data] copytool_out thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:44,657 | INFO     | [data] queue_monitor thread has finished
[2025-05-15 21:23:30] 2025-05-15 18:55:45,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574993864512)>', '<ExcThread(monitor, started 140574313133824)>']
[2025-05-15 21:23:30] 2025-05-15 18:55:46,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-15 21:23:30] 2025-05-15 18:55:46,265 | INFO     | [monitor] control thread has ended
[2025-05-15 21:23:30] 2025-05-15 18:55:50,697 | INFO     | all workflow threads have been joined
[2025-05-15 21:23:30] 2025-05-15 18:55:50,697 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-15 21:23:30] 2025-05-15 18:55:50,698 | INFO     | traces error code: 0
[2025-05-15 21:23:30] 2025-05-15 18:55:50,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-15 21:23:30] 2025-05-15 18:55:51,138 [wrapper] ==== pilot stdout END ====
[2025-05-15 21:23:30] 2025-05-15 18:55:51,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-15 21:23:30] 2025-05-15 18:55:51,339 [wrapper] pilotpid: 5038
[2025-05-15 21:23:30] 2025-05-15 18:55:51,441 [wrapper] Pilot exit status: 0
[2025-05-15 21:23:30] 2025-05-15 18:55:51,940 [wrapper] pandaids: 6650088657
[2025-05-15 21:23:30] 2025-05-15 18:55:52,737 [wrapper] cleanup supervisor_pilot  5722 5039
[2025-05-15 21:23:30] 2025-05-15 18:55:52,832 [wrapper] Test setup, not cleaning
[2025-05-15 21:23:30] 2025-05-15 18:55:52,941 [wrapper] apfmon messages muted
[2025-05-15 21:23:30] 2025-05-15 18:55:53,020 [wrapper] ==== wrapper stdout END ====
[2025-05-15 21:23:30] 2025-05-15 18:55:53,133 [wrapper] ==== wrapper stderr END ====
[2025-05-15 21:23:30]  *** Error codes and diagnostics ***
[2025-05-15 21:23:30]     "exeErrorCode": 0,
[2025-05-15 21:23:30]     "exeErrorDiag": "",
[2025-05-15 21:23:30]     "pilotErrorCode": 0,
[2025-05-15 21:23:30]     "pilotErrorDiag": "",
[2025-05-15 21:23:30]  *** Listing of results directory ***
[2025-05-15 21:23:30] total 412808
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc    495897 May 15 03:35 pilot3.tar.gz
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc      5111 May 15 04:07 queuedata.json
[2025-05-15 21:23:30] -rwx------. 1 boinc boinc     37140 May 15 04:08 runpilot2-wrapper.sh
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc       100 May 15 15:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-15 21:23:30] -rwxr-xr-x. 1 boinc boinc      7986 May 15 15:14 run_atlas
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc       105 May 15 15:14 job.xml
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc      6371 May 15 15:14 init_data.xml
[2025-05-15 21:23:30] -rw-r--r--. 2 boinc boinc 221226139 May 15 15:14 EVNT.44638096._001288.pool.root.1
[2025-05-15 21:23:30] -rw-r--r--. 2 boinc boinc     17569 May 15 15:14 start_atlas.sh
[2025-05-15 21:23:30] drwxrwx--x. 2 boinc boinc        68 May 15 15:14 shared
[2025-05-15 21:23:30] -rw-r--r--. 2 boinc boinc    508871 May 15 15:14 input.tar.gz
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc         0 May 15 15:14 boinc_lockfile
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc      2538 May 15 15:45 pandaJob.out
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc       424 May 15 15:45 setup.sh.local
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc    995423 May 15 15:48 agis_schedconf.cvmfs.json
[2025-05-15 21:23:30] drwx------. 4 boinc boinc      4096 May 15 15:48 pilot3
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc 193637770 May 15 20:52 HITS.44638099._016662.pool.root.1
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc       531 May 15 20:53 boinc_task_state.xml
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc      1017 May 15 20:53 memory_monitor_summary.json
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc   1596741 May 15 20:54 agis_ddmendpoints.agis.ALL.json
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc    424542 May 15 20:54 log.44638099._016662.job.log.tgz.1
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc        95 May 15 20:54 pilot_heartbeat.json
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc      7693 May 15 20:55 heartbeat.json
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc      4540 May 15 20:55 pilotlog.txt
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc   1585654 May 15 20:55 log.44638099._016662.job.log.1
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc       357 May 15 20:55 output.list
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc       620 May 15 20:55 runtime_log
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc   2027520 May 15 20:55 result.tar.gz
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc     11031 May 15 20:55 runtime_log.err
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc       657 May 15 20:55 fS3LDmiCdZ7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6qGKDm6NruAo.diag
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc      8192 May 15 21:23 boinc_mmap_file
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc        28 May 15 21:23 wrapper_checkpoint.txt
[2025-05-15 21:23:30] -rw-r--r--. 1 boinc boinc     20503 May 15 21:23 stderr.txt
[2025-05-15 21:23:30] HITS file was successfully produced:
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc 193637770 May 15 20:52 shared/HITS.pool.root.1
[2025-05-15 21:23:30]  *** Contents of shared directory: ***
[2025-05-15 21:23:30] total 407644
[2025-05-15 21:23:30] -rw-r--r--. 2 boinc boinc 221226139 May 15 15:14 ATLAS.root_0
[2025-05-15 21:23:30] -rw-r--r--. 2 boinc boinc     17569 May 15 15:14 start_atlas.sh
[2025-05-15 21:23:30] -rw-r--r--. 2 boinc boinc    508871 May 15 15:14 input.tar.gz
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc 193637770 May 15 20:52 HITS.pool.root.1
[2025-05-15 21:23:30] -rw-------. 1 boinc boinc   2027520 May 15 20:55 result.tar.gz
21:23:32 (13736): run_atlas exited; CPU time 66351.423156
21:23:32 (13736): called boinc_finish(0)

</stderr_txt>
]]>

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