Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:41:40 (880093): wrapper (7.7.26015): starting
13:41:40 (880093): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 13:41:40] Arguments: --nthreads 4
[2025-05-16 13:41:40] Threads: 4
[2025-05-16 13:41:40] Checking for CVMFS
[2025-05-16 13:41:40] No cvmfs_config command found, will try listing directly
[2025-05-16 13:41:40] CVMFS is ok
[2025-05-16 13:41:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 13:41:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 13:41:40] Further information can be found at the LHC@home message board.
[2025-05-16 13:41:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 13:41:40] Checking for apptainer binary...
[2025-05-16 13:41:40] which: no apptainer in ((null))
[2025-05-16 13:41:40] apptainer is not installed, using version from CVMFS
[2025-05-16 13:41:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 13:41:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-05-16 13:41:40] apptainer works
[2025-05-16 13:41:40] Set ATHENA_PROC_NUMBER=4
[2025-05-16 13:41:40] Set ATHENA_CORE_NUMBER=4
[2025-05-16 13:41:40] Starting ATLAS job with PandaID=6650045686
[2025-05-16 13:41:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:10:47 (11775): wrapper (7.7.26015): starting
14:10:47 (11775): wrapper: running run_atlas (--nthreads 4)
[2025-05-16 14:10:47] Arguments: --nthreads 4
[2025-05-16 14:10:47] Threads: 4
[2025-05-16 14:10:47] This job has been restarted, cleaning up previous attempt
[2025-05-16 14:10:47] Checking for CVMFS
[2025-05-16 14:10:47] No cvmfs_config command found, will try listing directly
[2025-05-16 14:10:47] CVMFS is ok
[2025-05-16 14:10:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 14:10:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 14:10:47] Further information can be found at the LHC@home message board.
[2025-05-16 14:10:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 14:10:47] Checking for apptainer binary...
[2025-05-16 14:10:47] which: no apptainer in ((null))
[2025-05-16 14:10:47] apptainer is not installed, using version from CVMFS
[2025-05-16 14:10:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 14:10:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-05-16 14:10:48] apptainer works
[2025-05-16 14:10:48] Set ATHENA_PROC_NUMBER=4
[2025-05-16 14:10:48] Set ATHENA_CORE_NUMBER=4
[2025-05-16 14:10:48] Starting ATLAS job with PandaID=6650045686
[2025-05-16 14:10:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 17:57:30]  *** The last 200 lines of the pilot log: ***
[2025-05-16 17:57:30] 2025-05-16 15:57:09,976 | INFO     | mean x: 1747404392.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,976 | INFO     | mean y: 2307085.4377880185
[2025-05-16 17:57:30] 2025-05-16 15:57:09,976 | INFO     | -- intersect: -31001907138.098637
[2025-05-16 17:57:30] 2025-05-16 15:57:09,976 | INFO     | intersect: -31001907138.098637
[2025-05-16 17:57:30] 2025-05-16 15:57:09,976 | INFO     | chi2: 1.6636912985507304
[2025-05-16 17:57:30] 2025-05-16 15:57:09,977 | INFO     | current chi2=1.6636912985507304 (change=61.47249050608029 %)
[2025-05-16 17:57:30] 2025-05-16 15:57:09,977 | INFO     | sum of square deviations: 2954447953.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,978 | INFO     | sum of deviations: 13013896068.500002
[2025-05-16 17:57:30] 2025-05-16 15:57:09,978 | INFO     | mean x: 1747404544.5
[2025-05-16 17:57:30] 2025-05-16 15:57:09,978 | INFO     | mean y: 2337874.3254716983
[2025-05-16 17:57:30] 2025-05-16 15:57:09,978 | INFO     | -- intersect: -7694714669.333802
[2025-05-16 17:57:30] 2025-05-16 15:57:09,978 | INFO     | intersect: -7694714669.333802
[2025-05-16 17:57:30] 2025-05-16 15:57:09,979 | INFO     | chi2: 0.04928324129832086
[2025-05-16 17:57:30] 2025-05-16 15:57:09,979 | INFO     | current chi2=0.04928324129832086 (change=97.03771719301217 %)
[2025-05-16 17:57:30] 2025-05-16 15:57:09,979 | INFO     | sum of square deviations: 2750295288.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,980 | INFO     | sum of deviations: 7338109192.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,980 | INFO     | mean x: 1747404697.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,981 | INFO     | mean y: 2342067.690821256
[2025-05-16 17:57:30] 2025-05-16 15:57:09,981 | INFO     | -- intersect: -4659937842.814438
[2025-05-16 17:57:30] 2025-05-16 15:57:09,981 | INFO     | intersect: -4659937842.814438
[2025-05-16 17:57:30] 2025-05-16 15:57:09,981 | INFO     | chi2: 0.00098547882977215
[2025-05-16 17:57:30] 2025-05-16 15:57:09,981 | INFO     | current chi2=0.00098547882977215 (change=98.00037740251932 %)
[2025-05-16 17:57:30] 2025-05-16 15:57:09,981 | INFO     | sum of square deviations: 2555770710.5
[2025-05-16 17:57:30] 2025-05-16 15:57:09,983 | INFO     | sum of deviations: 6116668128.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,983 | INFO     | mean x: 1747404849.5
[2025-05-16 17:57:30] 2025-05-16 15:57:09,983 | INFO     | mean y: 2343024.5148514854
[2025-05-16 17:57:30] 2025-05-16 15:57:09,983 | INFO     | -- intersect: -4179681405.821575
[2025-05-16 17:57:30] 2025-05-16 15:57:09,983 | INFO     | intersect: -4179681405.821575
[2025-05-16 17:57:30] 2025-05-16 15:57:09,983 | INFO     | chi2: 0.00047572017161299476
[2025-05-16 17:57:30] 2025-05-16 15:57:09,983 | INFO     | current chi2=0.00047572017161299476 (change=51.727002423483334 %)
[2025-05-16 17:57:30] 2025-05-16 15:57:09,984 | INFO     | sum of square deviations: 2370641658.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,985 | INFO     | sum of deviations: 5251395511.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,985 | INFO     | mean x: 1747405002.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,985 | INFO     | mean y: 2343736.2588832485
[2025-05-16 17:57:30] 2025-05-16 15:57:09,985 | INFO     | -- intersect: -3868471050.2927775
[2025-05-16 17:57:30] 2025-05-16 15:57:09,985 | INFO     | intersect: -3868471050.2927775
[2025-05-16 17:57:30] 2025-05-16 15:57:09,985 | INFO     | chi2: 0.00027652385720101946
[2025-05-16 17:57:30] 2025-05-16 15:57:09,985 | INFO     | current chi2=0.00027652385720101946 (change=41.87258104624254 %)
[2025-05-16 17:57:30] 2025-05-16 15:57:09,986 | INFO     | sum of square deviations: 2194675568.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,987 | INFO     | sum of deviations: 4635055872.5
[2025-05-16 17:57:30] 2025-05-16 15:57:09,987 | INFO     | mean x: 1747405154.5
[2025-05-16 17:57:30] 2025-05-16 15:57:09,987 | INFO     | mean y: 2344269.9635416665
[2025-05-16 17:57:30] 2025-05-16 15:57:09,987 | INFO     | -- intersect: -3688096650.3693333
[2025-05-16 17:57:30] 2025-05-16 15:57:09,987 | INFO     | intersect: -3688096650.3693333
[2025-05-16 17:57:30] 2025-05-16 15:57:09,987 | INFO     | chi2: 0.00021683735735148117
[2025-05-16 17:57:30] 2025-05-16 15:57:09,988 | INFO     | current chi2=0.00021683735735148117 (change=21.584575180487626 %)
[2025-05-16 17:57:30] 2025-05-16 15:57:09,988 | INFO     | left removable region: 60
[2025-05-16 17:57:30] 2025-05-16 15:57:09,988 | INFO     | sum of square deviations: 1177156955.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,989 | INFO     | sum of deviations: 2232233329.0
[2025-05-16 17:57:30] 2025-05-16 15:57:09,989 | INFO     | mean x: 1747405886.5
[2025-05-16 17:57:30] 2025-05-16 15:57:09,989 | INFO     | mean y: 2346247.0512820515
[2025-05-16 17:57:30] 2025-05-16 15:57:09,989 | INFO     | -- intersect: -3311245574.8108172
[2025-05-16 17:57:30] 2025-05-16 15:57:09,989 | INFO     | intersect: -3311245574.8108172
[2025-05-16 17:57:30] 2025-05-16 15:57:09,990 | INFO     | chi2: 0.00016168279241134278
[2025-05-16 17:57:30] 2025-05-16 15:57:09,990 | INFO     | -- intersect: -3311245574.8108172
[2025-05-16 17:57:30] 2025-05-16 15:57:09,992 | INFO     | current memory leak: 1.90 B/s (using 156 data points, chi2=0.00)
[2025-05-16 17:57:30] 2025-05-16 15:57:09,993 | INFO     | ..............................
[2025-05-16 17:57:30] 2025-05-16 15:57:09,993 | INFO     | . Timing measurements:
[2025-05-16 17:57:30] 2025-05-16 15:57:09,993 | INFO     | . get job = 0 s
[2025-05-16 17:57:30] 2025-05-16 15:57:09,993 | INFO     | . initial setup = 1 s
[2025-05-16 17:57:30] 2025-05-16 15:57:09,993 | INFO     | . payload setup = 7 s
[2025-05-16 17:57:30] 2025-05-16 15:57:09,993 | INFO     | . stage-in = 0 s
[2025-05-16 17:57:30] 2025-05-16 15:57:09,993 | INFO     | . payload execution = 13531 s
[2025-05-16 17:57:30] 2025-05-16 15:57:09,993 | INFO     | . stage-out = 0 s
[2025-05-16 17:57:30] 2025-05-16 15:57:09,993 | INFO     | . log creation = 0 s
[2025-05-16 17:57:30] 2025-05-16 15:57:09,993 | INFO     | ..............................
[2025-05-16 17:57:30] 2025-05-16 15:57:10,326 | INFO     | 
[2025-05-16 17:57:30] 2025-05-16 15:57:10,327 | INFO     | job summary report
[2025-05-16 17:57:30] 2025-05-16 15:57:10,327 | INFO     | --------------------------------------------------
[2025-05-16 17:57:30] 2025-05-16 15:57:10,327 | INFO     | PanDA job id: 6650045686
[2025-05-16 17:57:30] 2025-05-16 15:57:10,327 | INFO     | task id: 44638099
[2025-05-16 17:57:30] 2025-05-16 15:57:10,327 | INFO     | errors: (none)
[2025-05-16 17:57:30] 2025-05-16 15:57:10,327 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 17:57:30] 2025-05-16 15:57:10,327 | INFO     | pilot state: finished 
[2025-05-16 17:57:30] 2025-05-16 15:57:10,327 | INFO     | transexitcode: 0
[2025-05-16 17:57:30] 2025-05-16 15:57:10,327 | INFO     | exeerrorcode: 0
[2025-05-16 17:57:30] 2025-05-16 15:57:10,327 | INFO     | exeerrordiag: 
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | exitcode: 0
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | exitmsg: OK
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | cpuconsumptiontime: 49068 s
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | nevents: 400
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | neventsw: 0
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | pid: 366705
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | pgrp: 366705
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | corecount: 4
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | event service: False
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | sizes: {0: 2393721, 5: 2393927, 11: 2393983, 13542: 2424594, 13543: 2433613, 13551: 2433727}
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | --------------------------------------------------
[2025-05-16 17:57:30] 2025-05-16 15:57:10,328 | INFO     | 
[2025-05-16 17:57:30] 2025-05-16 15:57:10,329 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-05-16 17:57:30] 2025-05-16 15:57:10,349 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,349 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,349 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,349 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,350 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,350 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,350 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,350 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,350 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,350 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,350 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,351 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 17:57:30] 2025-05-16 15:57:10,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,351 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 17:57:30] 2025-05-16 15:57:10,351 | INFO     | job 6650045686 has completed (purged errors)
[2025-05-16 17:57:30] 2025-05-16 15:57:10,351 | INFO     | overall cleanup function is called
[2025-05-16 17:57:30] 2025-05-16 15:57:11,359 | INFO     | --- collectZombieJob: --- 10, [366705]
[2025-05-16 17:57:30] 2025-05-16 15:57:11,360 | INFO     | zombie collector waiting for pid 366705
[2025-05-16 17:57:30] 2025-05-16 15:57:11,360 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 17:57:30] 2025-05-16 15:57:11,360 | INFO     | collected zombie processes
[2025-05-16 17:57:30] 2025-05-16 15:57:11,360 | INFO     | will attempt to kill all subprocesses of pid=366705
[2025-05-16 17:57:30] 2025-05-16 15:57:11,806 | INFO     | process IDs to be killed: [366705] (in reverse order)
[2025-05-16 17:57:30] 2025-05-16 15:57:12,015 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 17:57:30] 2025-05-16 15:57:12,015 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 17:57:30] 2025-05-16 15:57:12,038 | INFO     | did not find any defunct processes belonging to 366705
[2025-05-16 17:57:30] 2025-05-16 15:57:12,055 | INFO     | did not find any defunct processes belonging to 366705
[2025-05-16 17:57:30] 2025-05-16 15:57:12,055 | INFO     | ready for new job
[2025-05-16 17:57:30] 2025-05-16 15:57:12,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 17:57:30] 2025-05-16 15:57:12,057 | INFO     | **************************************
[2025-05-16 17:57:30] 2025-05-16 15:57:12,057 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 17:57:30] 2025-05-16 15:57:12,057 | INFO     | **************************************
[2025-05-16 17:57:30] 2025-05-16 15:57:12,057 | INFO     | 
[2025-05-16 17:57:30] 2025-05-16 15:57:12,065 | INFO     | architecture information:
[2025-05-16 17:57:30] 2025-05-16 15:57:12,066 | INFO     | executing command: cat /etc/os-release
[2025-05-16 17:57:30] 2025-05-16 15:57:12,081 | INFO     | cat /etc/os-release:
[2025-05-16 17:57:30] NAME="CentOS Linux"
[2025-05-16 17:57:30] VERSION="7 (Core)"
[2025-05-16 17:57:30] ID="centos"
[2025-05-16 17:57:30] ID_LIKE="rhel fedora"
[2025-05-16 17:57:30] VERSION_ID="7"
[2025-05-16 17:57:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 17:57:30] ANSI_COLOR="0;31"
[2025-05-16 17:57:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 17:57:30] HOME_URL="https://www.centos.org/"
[2025-05-16 17:57:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 17:57:30] 
[2025-05-16 17:57:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 17:57:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 17:57:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 17:57:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 17:57:30] 
[2025-05-16 17:57:30] 2025-05-16 15:57:12,084 | INFO     | **************************************
[2025-05-16 17:57:30] 2025-05-16 15:57:12,587 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-05-16 17:57:30] 2025-05-16 15:57:12,603 | INFO     | sufficient remaining disk space (3356917497856 B)
[2025-05-16 17:57:30] 2025-05-16 15:57:12,603 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 17:57:30] 2025-05-16 15:57:12,603 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 17:57:30] 2025-05-16 15:57:12,603 | INFO     | update_server=False
[2025-05-16 17:57:30] 2025-05-16 15:57:12,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 17:57:30] 2025-05-16 15:57:12,604 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-16 17:57:30] 2025-05-16 15:57:12,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 17:57:30] 2025-05-16 15:57:12,605 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 17:57:30] 2025-05-16 15:57:12,605 | INFO     | aborting loop
[2025-05-16 17:57:30] 2025-05-16 15:57:12,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 17:57:30] 2025-05-16 15:57:12,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 17:57:30] 2025-05-16 15:57:12,698 | INFO     | all payload control threads have been joined
[2025-05-16 17:57:30] 2025-05-16 15:57:12,960 | INFO     | all data control threads have been joined
[2025-05-16 17:57:30] 2025-05-16 15:57:13,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 17:57:30] 2025-05-16 15:57:13,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 17:57:30] 2025-05-16 15:57:13,400 | INFO     | all job control threads have been joined
[2025-05-16 17:57:30] 2025-05-16 15:57:13,609 | INFO     | [job] retrieve thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:13,610 | INFO     | [job] job monitor thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:13,618 | INFO     | [payload] failed_post thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:13,678 | INFO     | [payload] validate_post thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:13,704 | INFO     | [payload] control thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:13,965 | INFO     | [data] control thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:14,204 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:14,405 | INFO     | [job] control thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:14,454 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:14,489 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:14,833 | INFO     | [job] validate thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:15,035 | INFO     | [data] copytool_in thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:15,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 17:57:30] 2025-05-16 15:57:15,302 | INFO     | [data] copytool_out thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:16,093 | INFO     | [job] queue monitor thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:17,374 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:23,543 | INFO     | job.realtimelogging is not enabled
[2025-05-16 17:57:30] 2025-05-16 15:57:24,548 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 17:57:30] 2025-05-16 15:57:25,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23423712384832)>', '<ExcThread(monitor, started 23423138916096)>']
[2025-05-16 17:57:30] 2025-05-16 15:57:25,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 17:57:30] 2025-05-16 15:57:25,671 | INFO     | [monitor] control thread has ended
[2025-05-16 17:57:30] 2025-05-16 15:57:30,053 | INFO     | all workflow threads have been joined
[2025-05-16 17:57:30] 2025-05-16 15:57:30,054 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 17:57:30] 2025-05-16 15:57:30,054 | INFO     | traces error code: 0
[2025-05-16 17:57:30] 2025-05-16 15:57:30,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 17:57:30] 2025-05-16 15:57:30,176 [wrapper] ==== pilot stdout END ====
[2025-05-16 17:57:30] 2025-05-16 15:57:30,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 17:57:30] 2025-05-16 15:57:30,181 [wrapper] pilotpid: 137503
[2025-05-16 17:57:30] 2025-05-16 15:57:30,184 [wrapper] Pilot exit status: 0
[2025-05-16 17:57:30] 2025-05-16 15:57:30,194 [wrapper] pandaids: 6650045686 6650045686
[2025-05-16 17:57:30] 2025-05-16 15:57:30,289 [wrapper] cleanup supervisor_pilot 1460169 137508
[2025-05-16 17:57:30] 2025-05-16 15:57:30,291 [wrapper] Test setup, not cleaning
[2025-05-16 17:57:30] 2025-05-16 15:57:30,295 [wrapper] apfmon messages muted
[2025-05-16 17:57:30] 2025-05-16 15:57:30,299 [wrapper] ==== wrapper stdout END ====
[2025-05-16 17:57:30] 2025-05-16 15:57:30,301 [wrapper] ==== wrapper stderr END ====
[2025-05-16 17:57:30]  *** Error codes and diagnostics ***
[2025-05-16 17:57:30]     "exeErrorCode": 0,
[2025-05-16 17:57:30]     "exeErrorDiag": "",
[2025-05-16 17:57:30]     "pilotErrorCode": 0,
[2025-05-16 17:57:30]     "pilotErrorDiag": "",
[2025-05-16 17:57:30]  *** Listing of results directory ***
[2025-05-16 17:57:30] total 627608
[2025-05-16 17:57:30] drwx------ 4 boinc boinc      4096 Apr  3 10:00 pilot3
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc    495897 May 14 22:40 pilot3.tar.gz
[2025-05-16 17:57:30] -rwx------ 1 boinc boinc     37140 May 14 23:44 runpilot2-wrapper.sh
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc      5111 May 14 23:44 queuedata.json
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc       100 May 16 12:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 17:57:30] -rwxr-xr-x 1 boinc boinc      7986 May 16 12:54 run_atlas
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc       105 May 16 12:54 job.xml
[2025-05-16 17:57:30] -rw-r--r-- 3 boinc boinc 221298487 May 16 13:41 EVNT.44638096._001045.pool.root.1
[2025-05-16 17:57:30] -rw-r--r-- 3 boinc boinc 221298487 May 16 13:41 ATLAS.root_0
[2025-05-16 17:57:30] -rw-r--r-- 2 boinc boinc    508873 May 16 13:41 input.tar.gz
[2025-05-16 17:57:30] -rw-r--r-- 2 boinc boinc     17569 May 16 13:41 start_atlas.sh
[2025-05-16 17:57:30] drwxrwx--x 2 boinc boinc      4096 May 16 13:41 shared
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc         0 May 16 13:41 boinc_lockfile
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc      6678 May 16 14:10 init_data.xml
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc      2538 May 16 14:10 pandaJob.out
[2025-05-16 17:57:30] -rw------- 1 boinc boinc       424 May 16 14:10 setup.sh.local
[2025-05-16 17:57:30] -rw------- 1 boinc boinc    989792 May 16 14:11 agis_schedconf.cvmfs.json
[2025-05-16 17:57:30] -rw------- 1 boinc boinc 193116318 May 16 17:56 HITS.44638099._013725.pool.root.1
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc       531 May 16 17:56 boinc_task_state.xml
[2025-05-16 17:57:30] -rw------- 1 boinc boinc      1037 May 16 17:56 memory_monitor_summary.json
[2025-05-16 17:57:30] -rw------- 1 boinc boinc   1596741 May 16 17:57 agis_ddmendpoints.agis.ALL.json
[2025-05-16 17:57:30] -rw------- 1 boinc boinc    342961 May 16 17:57 log.44638099._013725.job.log.tgz.1
[2025-05-16 17:57:30] -rw------- 1 boinc boinc        96 May 16 17:57 pilot_heartbeat.json
[2025-05-16 17:57:30] -rw------- 1 boinc boinc      7722 May 16 17:57 heartbeat.json
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc        28 May 16 17:57 wrapper_checkpoint.txt
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc      8192 May 16 17:57 boinc_mmap_file
[2025-05-16 17:57:30] -rw------- 1 boinc boinc      4559 May 16 17:57 pilotlog.txt
[2025-05-16 17:57:30] -rw------- 1 boinc boinc   1214960 May 16 17:57 log.44638099._013725.job.log.1
[2025-05-16 17:57:30] -rw------- 1 boinc boinc       357 May 16 17:57 output.list
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc       620 May 16 17:57 runtime_log
[2025-05-16 17:57:30] -rw------- 1 boinc boinc   1576960 May 16 17:57 result.tar.gz
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc     11501 May 16 17:57 runtime_log.err
[2025-05-16 17:57:30] -rw------- 1 boinc boinc       796 May 16 17:57 QO7KDmc4YZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKVHKDm6Wtobm.diag
[2025-05-16 17:57:30] -rw-r--r-- 1 boinc boinc     22467 May 16 17:57 stderr.txt
[2025-05-16 17:57:30] HITS file was successfully produced:
[2025-05-16 17:57:30] -rw------- 1 boinc boinc 193116318 May 16 17:56 shared/HITS.pool.root.1
[2025-05-16 17:57:30]  *** Contents of shared directory: ***
[2025-05-16 17:57:30] total 406772
[2025-05-16 17:57:30] -rw-r--r-- 3 boinc boinc 221298487 May 16 13:41 ATLAS.root_0
[2025-05-16 17:57:30] -rw-r--r-- 2 boinc boinc    508873 May 16 13:41 input.tar.gz
[2025-05-16 17:57:30] -rw-r--r-- 2 boinc boinc     17569 May 16 13:41 start_atlas.sh
[2025-05-16 17:57:30] -rw------- 1 boinc boinc 193116318 May 16 17:56 HITS.pool.root.1
[2025-05-16 17:57:30] -rw------- 1 boinc boinc   1576960 May 16 17:57 result.tar.gz
17:57:32 (11775): run_atlas exited; CPU time 49814.333929
17:57:32 (11775): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN