Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-14 23:24:19 (205068): Detected: vboxwrapper 26206
2025-05-14 23:24:19 (205068): Detected: BOINC client v8.0.2
2025-05-14 23:24:20 (205068): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-05-14 23:24:20 (205068): Successfully copied 'init_data.xml' to the shared directory.
2025-05-14 23:24:21 (205068): Create VM. (boinc_927ffddfe557539b, slot#0)
2025-05-14 23:24:21 (205068): Setting Memory Size for VM. (4800MB)
2025-05-14 23:24:22 (205068): Setting CPU Count for VM. (8)
2025-05-14 23:24:22 (205068): Setting Chipset Options for VM.
2025-05-14 23:24:22 (205068): Setting Graphics Controller Options for VM.
2025-05-14 23:24:22 (205068): Setting Boot Options for VM.
2025-05-14 23:24:23 (205068): Setting Network Configuration for NAT.
2025-05-14 23:24:23 (205068): Enabling VM Network Access.
2025-05-14 23:24:23 (205068): Disabling USB Support for VM.
2025-05-14 23:24:24 (205068): Disabling COM Port Support for VM.
2025-05-14 23:24:24 (205068): Disabling LPT Port Support for VM.
2025-05-14 23:24:24 (205068): Disabling Audio Support for VM.
2025-05-14 23:24:24 (205068): Disabling Clipboard Support for VM.
2025-05-14 23:24:25 (205068): Disabling Drag and Drop Support for VM.
2025-05-14 23:24:25 (205068): Adding storage controller(s) to VM.
2025-05-14 23:24:25 (205068): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-14 23:24:26 (205068): Adding VirtualBox Guest Additions to VM.
2025-05-14 23:24:26 (205068): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-14 23:24:26 (205068): forwarding host port 52338 to guest port 80
2025-05-14 23:24:26 (205068): Enabling remote desktop for VM.
2025-05-14 23:24:27 (205068): Required extension pack not installed, remote desktop not enabled.
2025-05-14 23:24:27 (205068): Enabling shared directory for VM.
2025-05-14 23:24:27 (205068): Starting VM using VBoxManage interface. (boinc_927ffddfe557539b, slot#0)
2025-05-14 23:24:37 (205068): Successfully started VM. (PID = '194468')
2025-05-14 23:24:37 (205068): Reporting VM Process ID to BOINC.
2025-05-14 23:24:37 (205068): Guest Log: BIOS: VirtualBox 7.1.4
2025-05-14 23:24:37 (205068): Guest Log: CPUID EDX: 0x178bfbff
2025-05-14 23:24:37 (205068): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-14 23:24:37 (205068): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-14 23:24:37 (205068): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-14 23:24:37 (205068): Detected: Web Application Enabled (http://localhost:52338)
2025-05-14 23:24:37 (205068): Preference change detected
2025-05-14 23:24:37 (205068): Setting CPU throttle for VM. (75%)
2025-05-14 23:24:38 (205068): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-14 23:24:39 (205068): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-14 23:24:39 (205068): Guest Log: BIOS: Booting from Hard Disk...
2025-05-14 23:24:50 (205068): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-14 23:24:50 (205068): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-14 23:24:50 (205068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-14 23:26:09 (205068): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-14 23:26:09 (205068): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-14 23:32:02 (205068): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-14 23:32:02 (205068): Guest Log: 00:00:00.002529 main     Log opened 2025-05-14T23:32:00.537306000Z
2025-05-14 23:32:02 (205068): Guest Log: 00:00:00.003505 main     OS Product: Linux
2025-05-14 23:32:02 (205068): Guest Log: 00:00:00.003628 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-14 23:32:02 (205068): Guest Log: 00:00:00.003717 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-14 23:32:02 (205068): Guest Log: 00:00:00.003904 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-14 23:32:02 (205068): Guest Log: 00:00:00.003905 main     Process ID: 1436
2025-05-14 23:32:02 (205068): Guest Log: 00:00:00.003906 main     Package type: LINUX_64BITS_GENERIC
2025-05-14 23:32:02 (205068): Guest Log: 00:00:00.016604 main     5.2.32 r132073 started. Verbose level = 0
2025-05-14 23:32:05 (205068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-14 23:32:06 (205068): Guest Log: [INFO] Mounting shared directory
2025-05-14 23:32:11 (205068): Guest Log: [INFO] Checking for init_data.xml
2025-05-14 23:32:12 (205068): Guest Log: 00:00:10.200592 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 786 677 000ns (GuestNow=1 747 279 932 417 424 000 ns GuestLast=1 747 265 520 630 747 000 ns fSetTimeLastLoop=true )
2025-05-14 23:32:46 (205068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-14 23:32:47 (205068): Guest Log: [INFO] Detected branch: prod
2025-05-14 23:32:50 (205068): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-14 23:32:50 (205068): Guest Log: Copying input files
2025-05-14 23:32:57 (205068): Guest Log: Copied input files into RunAtlas.
2025-05-14 23:32:59 (205068): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-14 23:32:59 (205068): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-14 23:32:59 (205068): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-14 23:32:59 (205068): Guest Log: Further information can be found at the LHC@home message board.
2025-05-14 23:33:34 (205068): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-14 23:33:38 (205068): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-14 23:33:38 (205068): Guest Log: 2.6.3.0 1731 1 30184 146006 3 1 3117515 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-14 23:33:45 (205068): Guest Log: copied the webapp to /var/www
2025-05-14 23:33:46 (205068): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-14 23:33:46 (205068): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-14 23:33:48 (205068): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-14 23:33:50 (205068): Guest Log:  *** Starting ATLAS job. (PandaID=6650084536 taskID=44638099) ***
2025-05-15 01:04:36 (205068): Status Report: Elapsed Time: '6000.000000'
2025-05-15 01:04:36 (205068): Status Report: CPU Time: '8200.890625'
2025-05-15 02:44:35 (205068): Status Report: Elapsed Time: '12000.000000'
2025-05-15 02:44:35 (205068): Status Report: CPU Time: '27190.000000'
2025-05-15 04:24:41 (205068): Status Report: Elapsed Time: '18000.000000'
2025-05-15 04:24:41 (205068): Status Report: CPU Time: '54766.812500'
2025-05-15 06:04:40 (205068): Status Report: Elapsed Time: '24000.000000'
2025-05-15 06:04:40 (205068): Status Report: CPU Time: '81945.437500'
2025-05-15 07:44:39 (205068): Status Report: Elapsed Time: '30000.000000'
2025-05-15 07:44:39 (205068): Status Report: CPU Time: '106321.046875'
2025-05-15 09:24:38 (205068): Status Report: Elapsed Time: '36000.000000'
2025-05-15 09:24:38 (205068): Status Report: CPU Time: '134795.812500'
2025-05-15 11:04:37 (205068): Status Report: Elapsed Time: '42000.000000'
2025-05-15 11:04:37 (205068): Status Report: CPU Time: '164560.125000'
2025-05-15 12:22:30 (205068): Guest Log:  *** Job finished ***
2025-05-15 12:22:30 (205068): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:07,782 | INFO     | [job] create_data_payload thread has finished
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:08,893 | INFO     | [data] copytool_out thread has finished
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:09,938 | INFO     | [data] queue_monitor thread has finished
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:11,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163453413184)>', '<ExcThread(monitor, started 140162994513664)>']
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:11,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:11,847 | INFO     | [monitor] control thread has ended
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:16,220 | INFO     | all workflow threads have been joined
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:16,221 | INFO     | end of generic workflow (traces error code: 0)
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:16,223 | INFO     | traces error code: 0
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:16,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:17,277 [wrapper] ==== pilot stdout END ====
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:17,339 [wrapper] ==== wrapper stdout RESUME ====
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:17,397 [wrapper] pilotpid: 6663
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:17,450 [wrapper] Pilot exit status: 0
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:18,031 [wrapper] pandaids: 6650084536
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:18,301 [wrapper] cleanup supervisor_pilot 10334 6664
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:18,373 [wrapper] Test setup, not cleaning
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:18,422 [wrapper] apfmon messages muted
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:18,471 [wrapper] ==== wrapper stdout END ====
2025-05-15 12:22:30 (205068): Guest Log: 2025-05-15 16:22:18,520 [wrapper] ==== wrapper stderr END ====
2025-05-15 12:22:30 (205068): Guest Log:  *** Error codes and diagnostics ***
2025-05-15 12:22:30 (205068): Guest Log:     "exeErrorCode": 0,
2025-05-15 12:22:30 (205068): Guest Log:     "exeErrorDiag": "",
2025-05-15 12:22:30 (205068): Guest Log:     "pilotErrorCode": 0,
2025-05-15 12:22:30 (205068): Guest Log:     "pilotErrorDiag": "",
2025-05-15 12:22:30 (205068): Guest Log:  *** Listing of results directory ***
2025-05-15 12:22:31 (205068): Guest Log: total 202508
2025-05-15 12:22:31 (205068): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 14 23:40 pilot3.tar.gz
2025-05-15 12:22:31 (205068): Guest Log: -rwx------. 1 atlas atlas     37140 May 15 00:07 runpilot2-wrapper.sh
2025-05-15 12:22:31 (205068): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 15 00:07 queuedata.json
2025-05-15 12:22:31 (205068): Guest Log: -rwxr-xr-x. 1 atlas atlas      6562 May 15 03:32 init_data.xml
2025-05-15 12:22:31 (205068): Guest Log: -rwxr-xr-x. 1 atlas atlas    508878 May 15 03:32 input.tar.gz
2025-05-15 12:22:31 (205068): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May 15 03:32 start_atlas.sh
2025-05-15 12:22:31 (205068): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 15 03:32 EVNT.44638096._001110.pool.root.1 -> /data/./ATLAS.root_0
2025-05-15 12:22:31 (205068): Guest Log: -rw-r--r--. 1 atlas atlas      2539 May 15 03:33 pandaJob.out
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas       424 May 15 03:39 setup.sh.local
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas    993858 May 15 04:02 agis_schedconf.cvmfs.json
2025-05-15 12:22:31 (205068): Guest Log: drwx------. 4 atlas atlas      4096 May 15 04:02 pilot3
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas 198463268 May 15 16:17 HITS.44638099._015340.pool.root.1
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas      1039 May 15 16:18 memory_monitor_summary.json
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas   1596741 May 15 16:18 agis_ddmendpoints.agis.ALL.json
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas    527593 May 15 16:18 log.44638099._015340.job.log.tgz.1
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas        96 May 15 16:21 pilot_heartbeat.json
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas      7722 May 15 16:22 heartbeat.json
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas      4916 May 15 16:22 pilotlog.txt
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas   2039644 May 15 16:22 log.44638099._015340.job.log.1
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas       357 May 15 16:22 output.list
2025-05-15 12:22:31 (205068): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 15 16:22 runtime_log
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas   2590720 May 15 16:22 result.tar.gz
2025-05-15 12:22:31 (205068): Guest Log: -rw-r--r--. 1 atlas atlas     10968 May 15 16:22 runtime_log.err
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas       673 May 15 16:22 dlWLDmRJbZ7n9Rq4apOajLDm4fhM0noT9bVof3QYDmRlGKDmKNhjrn.diag
2025-05-15 12:22:31 (205068): Guest Log: Looking for outputfile HITS.44638099._015340.pool.root.1
2025-05-15 12:22:31 (205068): Guest Log: HITS file was successfully produced
2025-05-15 12:22:31 (205068): Guest Log: -rw-------. 1 atlas atlas 198463268 May 15 16:17 /home/atlas/RunAtlas/HITS.44638099._015340.pool.root.1
2025-05-15 12:22:37 (205068): Guest Log: Successfully finished the ATLAS job!
2025-05-15 12:22:37 (205068): Guest Log: Copying the results back to the shared directory!
2025-05-15 12:22:39 (205068): Guest Log:  *** Contents of shared directory: ***
2025-05-15 12:22:39 (205068): Guest Log: total 415204
2025-05-15 12:22:39 (205068): Guest Log: -rwxrwxrwx. 1 root root 223569390 May 15 03:24 ATLAS.root_0
2025-05-15 12:22:39 (205068): Guest Log: -rwxrwxrwx. 1 root root 198463268 May 15  2025 HITS.pool.root.1
2025-05-15 12:22:39 (205068): Guest Log: -rwxrwxrwx. 1 root root      6562 May 15 03:24 init_data.xml
2025-05-15 12:22:39 (205068): Guest Log: -rwxrwxrwx. 1 root root    508878 May 15 03:04 input.tar.gz
2025-05-15 12:22:39 (205068): Guest Log: -rwxrwxrwx. 1 root root   2590720 May 15  2025 result.tar.gz
2025-05-15 12:22:39 (205068): Guest Log: -rwxrwxrwx. 1 root root     17569 May 15 03:04 start_atlas.sh
2025-05-15 12:22:40 (205068): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-15 12:22:40 (205068): VM Completion File Detected.
2025-05-15 12:22:40 (205068): Powering off VM.
2025-05-15 12:22:43 (205068): Successfully stopped VM.
2025-05-15 12:22:43 (205068): Deregistering VM. (boinc_927ffddfe557539b, slot#0)
2025-05-15 12:22:43 (205068): Removing network bandwidth throttle group from VM.
2025-05-15 12:22:43 (205068): Removing VM from VirtualBox.
12:22:49 (205068): called boinc_finish(0)

</stderr_txt>
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