Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:43:21 (16266): wrapper (7.7.26015): starting
08:43:21 (16266): wrapper: running run_atlas (--nthreads 8)
[2025-05-15 08:43:21] Arguments: --nthreads 8
[2025-05-15 08:43:21] Threads: 8
[2025-05-15 08:43:21] Checking for CVMFS
[2025-05-15 08:43:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-15 08:43:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-15 08:43:22] Running cvmfs_config stat atlas.cern.ch
[2025-05-15 08:43:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-15 08:43:24] 2.11.2.0 26199 4059 77976 146008 1 161 19032118 25165824 4638 130560 0 4048544 99.784 5286699 866 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-15 08:43:24] CVMFS is ok
[2025-05-15 08:43:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-15 08:43:24] Checking for apptainer binary...
[2025-05-15 08:43:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-15 08:43:24] Running /usr/bin/apptainer --version
[2025-05-15 08:43:24] apptainer version 1.3.2-1.el7
[2025-05-15 08:43:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-15 08:43:35] cg-vwn248.simple-grid.lan
[2025-05-15 08:43:35] apptainer works
[2025-05-15 08:43:35] Set ATHENA_PROC_NUMBER=8
[2025-05-15 08:43:35] Set ATHENA_CORE_NUMBER=8
[2025-05-15 08:43:35] Starting ATLAS job with PandaID=6650046728
[2025-05-15 08:43:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-15 14:21:25]  *** The last 200 lines of the pilot log: ***
[2025-05-15 14:21:25] 2025-05-15 12:02:58,473 | INFO     | mean x: 1747301106.0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,473 | INFO     | mean y: 2404360.063973064
[2025-05-15 14:21:25] 2025-05-15 12:02:58,474 | INFO     | -- intersect: -56149185492.82555
[2025-05-15 14:21:25] 2025-05-15 12:02:58,474 | INFO     | intersect: -56149185492.82555
[2025-05-15 14:21:25] 2025-05-15 12:02:58,474 | INFO     | chi2: 8.583629035169771
[2025-05-15 14:21:25] 2025-05-15 12:02:58,474 | INFO     | current chi2=8.583629035169771 (change=7.852175106377278 %)
[2025-05-15 14:21:25] 2025-05-15 12:02:58,474 | INFO     | right removable region: 296
[2025-05-15 14:21:25] 2025-05-15 12:02:58,475 | INFO     | sum of square deviations: 8123493708.0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,484 | INFO     | sum of deviations: 144511681559.99994
[2025-05-15 14:21:25] 2025-05-15 12:02:58,485 | INFO     | mean x: 1747301411.0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,485 | INFO     | mean y: 2435715.02020202
[2025-05-15 14:21:25] 2025-05-15 12:02:58,485 | INFO     | -- intersect: -31080922526.164093
[2025-05-15 14:21:25] 2025-05-15 12:02:58,485 | INFO     | intersect: -31080922526.164093
[2025-05-15 14:21:25] 2025-05-15 12:02:58,486 | INFO     | chi2: 4.631395662262961
[2025-05-15 14:21:25] 2025-05-15 12:02:58,486 | INFO     | current chi2=4.631395662262961 (change=50.28058240277269 %)
[2025-05-15 14:21:25] 2025-05-15 12:02:58,486 | INFO     | sum of square deviations: 7720081493.0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,489 | INFO     | sum of deviations: 74828109794.50002
[2025-05-15 14:21:25] 2025-05-15 12:02:58,489 | INFO     | mean x: 1747301563.5
[2025-05-15 14:21:25] 2025-05-15 12:02:58,489 | INFO     | mean y: 2462032.3869863013
[2025-05-15 14:21:25] 2025-05-15 12:02:58,490 | INFO     | -- intersect: -16933534479.596924
[2025-05-15 14:21:25] 2025-05-15 12:02:58,490 | INFO     | intersect: -16933534479.596924
[2025-05-15 14:21:25] 2025-05-15 12:02:58,490 | INFO     | chi2: 2.5551698568515695
[2025-05-15 14:21:25] 2025-05-15 12:02:58,490 | INFO     | current chi2=2.5551698568515695 (change=44.82937664619482 %)
[2025-05-15 14:21:25] 2025-05-15 12:02:58,491 | INFO     | sum of square deviations: 7330250928.0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,493 | INFO     | sum of deviations: 21269320485.000004
[2025-05-15 14:21:25] 2025-05-15 12:02:58,494 | INFO     | mean x: 1747301716.0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,494 | INFO     | mean y: 2482984.6271777004
[2025-05-15 14:21:25] 2025-05-15 12:02:58,494 | INFO     | -- intersect: -5067455349.903253
[2025-05-15 14:21:25] 2025-05-15 12:02:58,494 | INFO     | intersect: -5067455349.903253
[2025-05-15 14:21:25] 2025-05-15 12:02:58,495 | INFO     | chi2: 1.3644185289390833
[2025-05-15 14:21:25] 2025-05-15 12:02:58,495 | INFO     | current chi2=1.3644185289390833 (change=46.601650560315655 %)
[2025-05-15 14:21:25] 2025-05-15 12:02:58,499 | INFO     | sum of square deviations: 6953769450.5
[2025-05-15 14:21:25] 2025-05-15 12:02:58,502 | INFO     | sum of deviations: -8553681995.000002
[2025-05-15 14:21:25] 2025-05-15 12:02:58,502 | INFO     | mean x: 1747301868.5
[2025-05-15 14:21:25] 2025-05-15 12:02:58,502 | INFO     | mean y: 2494991.7730496456
[2025-05-15 14:21:25] 2025-05-15 12:02:58,502 | INFO     | -- intersect: 2151813377.8382726
[2025-05-15 14:21:25] 2025-05-15 12:02:58,503 | INFO     | intersect: 2151813377.8382726
[2025-05-15 14:21:25] 2025-05-15 12:02:58,503 | INFO     | chi2: 0.8365648827083276
[2025-05-15 14:21:25] 2025-05-15 12:02:58,503 | INFO     | current chi2=0.8365648827083276 (change=38.687076951468356 %)
[2025-05-15 14:21:25] 2025-05-15 12:02:58,504 | INFO     | sum of square deviations: 6590404498.0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,506 | INFO     | sum of deviations: -2242624862.0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,506 | INFO     | mean x: 1747302021.0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,506 | INFO     | mean y: 2492326.9241877254
[2025-05-15 14:21:25] 2025-05-15 12:02:58,507 | INFO     | -- intersect: 597075399.1630181
[2025-05-15 14:21:25] 2025-05-15 12:02:58,507 | INFO     | intersect: 597075399.1630181
[2025-05-15 14:21:25] 2025-05-15 12:02:58,507 | INFO     | chi2: 0.8070427303128799
[2025-05-15 14:21:25] 2025-05-15 12:02:58,507 | INFO     | current chi2=0.8070427303128799 (change=3.5289734252137848 %)
[2025-05-15 14:21:25] 2025-05-15 12:02:58,507 | INFO     | left removable region: 50
[2025-05-15 14:21:25] 2025-05-15 12:02:58,508 | INFO     | sum of square deviations: 4616114457.5
[2025-05-15 14:21:25] 2025-05-15 12:02:58,510 | INFO     | sum of deviations: 8562150228.500001
[2025-05-15 14:21:25] 2025-05-15 12:02:58,510 | INFO     | mean x: 1747302600.5
[2025-05-15 14:21:25] 2025-05-15 12:02:58,510 | INFO     | mean y: 2503667.8577235774
[2025-05-15 14:21:25] 2025-05-15 12:02:58,510 | INFO     | -- intersect: -3238461758.3401647
[2025-05-15 14:21:25] 2025-05-15 12:02:58,510 | INFO     | intersect: -3238461758.3401647
[2025-05-15 14:21:25] 2025-05-15 12:02:58,511 | INFO     | chi2: 0.0018217459848578164
[2025-05-15 14:21:25] 2025-05-15 12:02:58,511 | INFO     | -- intersect: -3238461758.3401647
[2025-05-15 14:21:25] 2025-05-15 12:02:58,511 | INFO     | current memory leak: 1.85 B/s (using 246 data points, chi2=0.00)
[2025-05-15 14:21:25] 2025-05-15 12:02:58,512 | INFO     | ..............................
[2025-05-15 14:21:25] 2025-05-15 12:02:58,512 | INFO     | . Timing measurements:
[2025-05-15 14:21:25] 2025-05-15 12:02:58,512 | INFO     | . get job = 0 s
[2025-05-15 14:21:25] 2025-05-15 12:02:58,513 | INFO     | . initial setup = 10 s
[2025-05-15 14:21:25] 2025-05-15 12:02:58,513 | INFO     | . payload setup = 118 s
[2025-05-15 14:21:25] 2025-05-15 12:02:58,513 | INFO     | . stage-in = 0 s
[2025-05-15 14:21:25] 2025-05-15 12:02:58,513 | INFO     | . payload execution = 18548 s
[2025-05-15 14:21:25] 2025-05-15 12:02:58,513 | INFO     | . stage-out = 3 s
[2025-05-15 14:21:25] 2025-05-15 12:02:58,513 | INFO     | . log creation = 1 s
[2025-05-15 14:21:25] 2025-05-15 12:02:58,513 | INFO     | ..............................
[2025-05-15 14:21:25] 2025-05-15 12:02:58,701 | INFO     | 
[2025-05-15 14:21:25] 2025-05-15 12:02:58,701 | INFO     | job summary report
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | --------------------------------------------------
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | PanDA job id: 6650046728
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | task id: 44638099
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | errors: (none)
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | pilot state: finished 
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | transexitcode: 0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | exeerrorcode: 0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | exeerrordiag: 
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | exitcode: 0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | exitmsg: OK
[2025-05-15 14:21:25] 2025-05-15 12:02:58,702 | INFO     | cpuconsumptiontime: 68051 s
[2025-05-15 14:21:25] 2025-05-15 12:02:58,703 | INFO     | nevents: 400
[2025-05-15 14:21:25] 2025-05-15 12:02:58,703 | INFO     | neventsw: 0
[2025-05-15 14:21:25] 2025-05-15 12:02:58,703 | INFO     | pid: 32524
[2025-05-15 14:21:25] 2025-05-15 12:02:58,703 | INFO     | pgrp: 32524
[2025-05-15 14:21:25] 2025-05-15 12:02:58,703 | INFO     | corecount: 8
[2025-05-15 14:21:25] 2025-05-15 12:02:58,703 | INFO     | event service: False
[2025-05-15 14:21:25] 2025-05-15 12:02:58,703 | INFO     | sizes: {0: 2393484, 1: 2393739, 12: 2393739, 23: 2393767, 33: 2393795, 44: 2393851, 55: 2394007, 66: 2394035, 76: 2394063, 87: 2394119, 89: 2394353, 98: 2394661, 1
[2025-05-15 14:21:25] 2025-05-15 12:02:58,703 | INFO     | --------------------------------------------------
[2025-05-15 14:21:25] 2025-05-15 12:02:58,703 | INFO     | 
[2025-05-15 14:21:25] 2025-05-15 12:02:58,704 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-05-15 14:21:25] 2025-05-15 12:02:59,289 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,289 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,289 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,289 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,290 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-15 14:21:25] 2025-05-15 12:02:59,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,291 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-15 14:21:25] 2025-05-15 12:02:59,291 | INFO     | job 6650046728 has completed (purged errors)
[2025-05-15 14:21:25] 2025-05-15 12:02:59,291 | INFO     | overall cleanup function is called
[2025-05-15 14:21:25] 2025-05-15 12:03:00,303 | INFO     | --- collectZombieJob: --- 10, [32524]
[2025-05-15 14:21:25] 2025-05-15 12:03:00,303 | INFO     | zombie collector waiting for pid 32524
[2025-05-15 14:21:25] 2025-05-15 12:03:00,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-15 14:21:25] 2025-05-15 12:03:00,304 | INFO     | collected zombie processes
[2025-05-15 14:21:25] 2025-05-15 12:03:00,304 | INFO     | will attempt to kill all subprocesses of pid=32524
[2025-05-15 14:21:25] 2025-05-15 12:03:00,436 | INFO     | process IDs to be killed: [32524] (in reverse order)
[2025-05-15 14:21:25] 2025-05-15 12:03:01,257 | WARNING  | found no corresponding commands to process id(s)
[2025-05-15 14:21:25] 2025-05-15 12:03:01,257 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-15 14:21:25] 2025-05-15 12:03:01,260 | INFO     | did not find any defunct processes belonging to 32524
[2025-05-15 14:21:25] 2025-05-15 12:03:01,263 | INFO     | did not find any defunct processes belonging to 32524
[2025-05-15 14:21:25] 2025-05-15 12:03:01,264 | INFO     | ready for new job
[2025-05-15 14:21:25] 2025-05-15 12:03:01,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-15 14:21:25] 2025-05-15 12:03:01,266 | INFO     | **************************************
[2025-05-15 14:21:25] 2025-05-15 12:03:01,266 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-15 14:21:25] 2025-05-15 12:03:01,267 | INFO     | **************************************
[2025-05-15 14:21:25] 2025-05-15 12:03:01,267 | INFO     | 
[2025-05-15 14:21:25] 2025-05-15 12:03:01,267 | INFO     | pilot is running in a VM
[2025-05-15 14:21:25] 2025-05-15 12:03:01,267 | INFO     | architecture information:
[2025-05-15 14:21:25] 2025-05-15 12:03:01,279 | INFO     | executing command: cat /etc/os-release
[2025-05-15 14:21:25] 2025-05-15 12:03:01,581 | INFO     | cat /etc/os-release:
[2025-05-15 14:21:25] NAME="CentOS Linux"
[2025-05-15 14:21:25] VERSION="7 (Core)"
[2025-05-15 14:21:25] ID="centos"
[2025-05-15 14:21:25] ID_LIKE="rhel fedora"
[2025-05-15 14:21:25] VERSION_ID="7"
[2025-05-15 14:21:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-15 14:21:25] ANSI_COLOR="0;31"
[2025-05-15 14:21:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-15 14:21:25] HOME_URL="https://www.centos.org/"
[2025-05-15 14:21:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-15 14:21:25] 
[2025-05-15 14:21:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-15 14:21:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-15 14:21:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-15 14:21:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-15 14:21:25] 
[2025-05-15 14:21:25] 2025-05-15 12:03:01,581 | INFO     | **************************************
[2025-05-15 14:21:25] 2025-05-15 12:03:02,085 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-05-15 14:21:25] 2025-05-15 12:03:02,319 | INFO     | sufficient remaining disk space (496696819712 B)
[2025-05-15 14:21:25] 2025-05-15 12:03:02,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-15 14:21:25] 2025-05-15 12:03:02,320 | INFO     | current server update state: UPDATING_FINAL
[2025-05-15 14:21:25] 2025-05-15 12:03:02,320 | INFO     | update_server=False
[2025-05-15 14:21:25] 2025-05-15 12:03:02,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-15 14:21:25] 2025-05-15 12:03:02,321 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-15 14:21:25] 2025-05-15 12:03:02,322 | INFO     | aborting loop
[2025-05-15 14:21:25] 2025-05-15 12:03:02,400 | INFO     | all job control threads have been joined
[2025-05-15 14:21:25] 2025-05-15 12:03:02,415 | INFO     | found 0 job(s) in 20 queues
[2025-05-15 14:21:25] 2025-05-15 12:03:02,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-15 14:21:25] 2025-05-15 12:03:02,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-15 14:21:25] 2025-05-15 12:03:02,541 | INFO     | all data control threads have been joined
[2025-05-15 14:21:25] 2025-05-15 12:03:02,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-15 14:21:25] 2025-05-15 12:03:03,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-15 14:21:25] 2025-05-15 12:03:03,326 | INFO     | [job] retrieve thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:03,327 | INFO     | [job] job monitor thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:03,406 | INFO     | [job] control thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:03,547 | INFO     | [data] control thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:03,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-15 14:21:25] 2025-05-15 12:03:03,778 | INFO     | [job] validate thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:03,797 | INFO     | all payload control threads have been joined
[2025-05-15 14:21:25] 2025-05-15 12:03:03,860 | INFO     | [payload] validate_pre thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:04,049 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:04,059 | INFO     | [data] copytool_in thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:04,110 | INFO     | [job] create_data_payload thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:04,153 | INFO     | [payload] failed_post thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:04,256 | INFO     | [payload] validate_post thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:04,297 | INFO     | [payload] execute_payloads thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:04,708 | INFO     | [data] copytool_out thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:04,722 | INFO     | [job] queue monitor thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:04,803 | INFO     | [payload] control thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:07,261 | INFO     | [data] queue_monitor thread has finished
[2025-05-15 14:21:25] 2025-05-15 12:03:08,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144642180928)>', '<ExcThread(monitor, started 140144329856768)>']
[2025-05-15 14:21:25] 2025-05-15 12:03:08,452 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-15 14:21:25] 2025-05-15 12:03:08,453 | INFO     | [monitor] control thread has ended
[2025-05-15 14:21:25] 2025-05-15 12:03:13,239 | INFO     | all workflow threads have been joined
[2025-05-15 14:21:25] 2025-05-15 12:03:13,239 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-15 14:21:25] 2025-05-15 12:03:13,240 | INFO     | traces error code: 0
[2025-05-15 14:21:25] 2025-05-15 12:03:13,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-15 14:21:25] 2025-05-15 12:03:13,719 [wrapper] ==== pilot stdout END ====
[2025-05-15 14:21:25] 2025-05-15 12:03:13,841 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-15 14:21:25] 2025-05-15 12:03:13,926 [wrapper] pilotpid: 21561
[2025-05-15 14:21:25] 2025-05-15 12:03:14,022 [wrapper] Pilot exit status: 0
[2025-05-15 14:21:25] 2025-05-15 12:03:14,391 [wrapper] pandaids: 6650046728
[2025-05-15 14:21:25] 2025-05-15 12:03:15,250 [wrapper] cleanup supervisor_pilot   763 21562
[2025-05-15 14:21:25] 2025-05-15 12:03:15,254 [wrapper] Test setup, not cleaning
[2025-05-15 14:21:25] 2025-05-15 12:03:15,258 [wrapper] apfmon messages muted
[2025-05-15 14:21:25] 2025-05-15 12:03:15,261 [wrapper] ==== wrapper stdout END ====
[2025-05-15 14:21:25] 2025-05-15 12:03:15,265 [wrapper] ==== wrapper stderr END ====
[2025-05-15 14:21:25]  *** Error codes and diagnostics ***
[2025-05-15 14:21:25]     "exeErrorCode": 0,
[2025-05-15 14:21:25]     "exeErrorDiag": "",
[2025-05-15 14:21:25]     "pilotErrorCode": 0,
[2025-05-15 14:21:25]     "pilotErrorDiag": "",
[2025-05-15 14:21:25]  *** Listing of results directory ***
[2025-05-15 14:21:25] total 419564
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc    495897 May 15 00:31 pilot3.tar.gz
[2025-05-15 14:21:25] -rwx------. 1 boinc boinc     37140 May 15 00:33 runpilot2-wrapper.sh
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc      5111 May 15 00:33 queuedata.json
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc       100 May 15 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-15 14:21:25] -rwxr-xr-x. 1 boinc boinc      7986 May 15 08:43 run_atlas
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc       105 May 15 08:43 job.xml
[2025-05-15 14:21:25] -rw-r--r--. 2 boinc boinc 222275592 May 15 08:43 EVNT.44638096._001066.pool.root.1
[2025-05-15 14:21:25] -rw-r--r--. 2 boinc boinc     17569 May 15 08:43 start_atlas.sh
[2025-05-15 14:21:25] drwxrwx--x. 2 boinc boinc        68 May 15 08:43 shared
[2025-05-15 14:21:25] -rw-r--r--. 2 boinc boinc    508873 May 15 08:43 input.tar.gz
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc         0 May 15 08:43 boinc_lockfile
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc      2538 May 15 08:43 pandaJob.out
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc       424 May 15 08:43 setup.sh.local
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc    995394 May 15 08:46 agis_schedconf.cvmfs.json
[2025-05-15 14:21:25] drwx------. 4 boinc boinc      4096 May 15 08:46 pilot3
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc      6374 May 15 09:01 init_data.xml
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc 199408380 May 15 14:00 HITS.44638099._014237.pool.root.1
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc       531 May 15 14:00 boinc_task_state.xml
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc      1017 May 15 14:01 memory_monitor_summary.json
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc   1596741 May 15 14:01 agis_ddmendpoints.agis.ALL.json
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc    429575 May 15 14:01 log.44638099._014237.job.log.tgz.1
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc        95 May 15 14:02 pilot_heartbeat.json
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc      7690 May 15 14:02 heartbeat.json
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc      4417 May 15 14:03 pilotlog.txt
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc   1628299 May 15 14:03 log.44638099._014237.job.log.1
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc       357 May 15 14:03 output.list
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc       620 May 15 14:03 runtime_log
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc   2078720 May 15 14:03 result.tar.gz
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc     11031 May 15 14:03 runtime_log.err
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc       657 May 15 14:03 rQnNDmfqZZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBbHKDmFh1yIo.diag
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc      8192 May 15 14:21 boinc_mmap_file
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc        28 May 15 14:21 wrapper_checkpoint.txt
[2025-05-15 14:21:25] -rw-r--r--. 1 boinc boinc     20459 May 15 14:21 stderr.txt
[2025-05-15 14:21:25] HITS file was successfully produced:
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc 199408380 May 15 14:00 shared/HITS.pool.root.1
[2025-05-15 14:21:25]  *** Contents of shared directory: ***
[2025-05-15 14:21:25] total 414356
[2025-05-15 14:21:25] -rw-r--r--. 2 boinc boinc 222275592 May 15 08:43 ATLAS.root_0
[2025-05-15 14:21:25] -rw-r--r--. 2 boinc boinc     17569 May 15 08:43 start_atlas.sh
[2025-05-15 14:21:25] -rw-r--r--. 2 boinc boinc    508873 May 15 08:43 input.tar.gz
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc 199408380 May 15 14:00 HITS.pool.root.1
[2025-05-15 14:21:25] -rw-------. 1 boinc boinc   2078720 May 15 14:03 result.tar.gz
14:21:27 (16266): run_atlas exited; CPU time 68308.736611
14:21:27 (16266): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN