Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:06:44 (44395): wrapper (7.7.26015): starting
21:06:44 (44395): wrapper: running run_atlas (--nthreads 8)
[2025-05-14 21:06:45] Arguments: --nthreads 8
[2025-05-14 21:06:45] Threads: 8
[2025-05-14 21:06:45] Checking for CVMFS
[2025-05-14 21:06:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-14 21:06:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-14 21:06:45] Running cvmfs_config stat atlas.cern.ch
[2025-05-14 21:06:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-14 21:06:46] 2.11.2.0 1942 97645 241216 146001 1 581 12300134 18432000 15221 130560 2 395576591 99.044 929011409 28068 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-14 21:06:46] CVMFS is ok
[2025-05-14 21:06:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-14 21:06:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-14 21:06:46] Further information can be found at the LHC@home message board.
[2025-05-14 21:06:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-14 21:06:46] Checking for apptainer binary...
[2025-05-14 21:06:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-14 21:06:46] Running /usr/bin/apptainer --version
[2025-05-14 21:06:46] apptainer version 1.3.2-1.el7
[2025-05-14 21:06:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-14 21:06:50] c-9-34.aglt2.org
[2025-05-14 21:06:50] apptainer works
[2025-05-14 21:06:50] Set ATHENA_PROC_NUMBER=8
[2025-05-14 21:06:50] Set ATHENA_CORE_NUMBER=8
[2025-05-14 21:06:50] Starting ATLAS job with PandaID=6650046640
[2025-05-14 21:06:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-15 22:16:36]  *** The last 200 lines of the pilot log: ***
[2025-05-15 22:16:36] 2025-05-16 02:16:12,534 | INFO     | mean x: 1747316512.388664
[2025-05-15 22:16:36] 2025-05-16 02:16:12,535 | INFO     | mean y: 2472857.8407557355
[2025-05-15 22:16:36] 2025-05-16 02:16:12,535 | INFO     | -- intersect: -2537888860.198552
[2025-05-15 22:16:36] 2025-05-16 02:16:12,535 | INFO     | intersect: -2537888860.198552
[2025-05-15 22:16:36] 2025-05-16 02:16:12,571 | INFO     | chi2: 6.940968684443526
[2025-05-15 22:16:36] 2025-05-16 02:16:12,573 | INFO     | sum of square deviations: 999140896026.6681
[2025-05-15 22:16:36] 2025-05-16 02:16:12,759 | INFO     | sum of deviations: 1561871138350.5503
[2025-05-15 22:16:36] 2025-05-16 02:16:12,759 | INFO     | mean x: 1747316359.8916724
[2025-05-15 22:16:36] 2025-05-16 02:16:12,759 | INFO     | mean y: 2474268.540961408
[2025-05-15 22:16:36] 2025-05-16 02:16:12,759 | INFO     | -- intersect: -2728955305.5415554
[2025-05-15 22:16:36] 2025-05-16 02:16:12,759 | INFO     | intersect: -2728955305.5415554
[2025-05-15 22:16:36] 2025-05-16 02:16:12,761 | INFO     | chi2: 6.135832360881516
[2025-05-15 22:16:36] 2025-05-16 02:16:12,761 | INFO     | current chi2=6.135832360881516 (change=11.599768853107266 %)
[2025-05-15 22:16:36] 2025-05-16 02:16:12,762 | INFO     | right removable region: 1476
[2025-05-15 22:16:36] 2025-05-16 02:16:12,764 | INFO     | sum of square deviations: 999140092656.6674
[2025-05-15 22:16:36] 2025-05-16 02:16:13,034 | INFO     | sum of deviations: 1040599873407.461
[2025-05-15 22:16:36] 2025-05-16 02:16:13,034 | INFO     | mean x: 1747316664.8916724
[2025-05-15 22:16:36] 2025-05-16 02:16:13,034 | INFO     | mean y: 2479248.671631686
[2025-05-15 22:16:36] 2025-05-16 02:16:13,035 | INFO     | -- intersect: -1817343130.244581
[2025-05-15 22:16:36] 2025-05-16 02:16:13,035 | INFO     | intersect: -1817343130.244581
[2025-05-15 22:16:36] 2025-05-16 02:16:13,037 | INFO     | chi2: 3.8820275786908316
[2025-05-15 22:16:36] 2025-05-16 02:16:13,037 | INFO     | current chi2=3.8820275786908316 (change=44.07080977916754 %)
[2025-05-15 22:16:36] 2025-05-16 02:16:13,040 | INFO     | sum of square deviations: 989027166477.681
[2025-05-15 22:16:36] 2025-05-16 02:16:13,228 | INFO     | sum of deviations: 726074420017.4202
[2025-05-15 22:16:36] 2025-05-16 02:16:13,228 | INFO     | mean x: 1747316817.394701
[2025-05-15 22:16:36] 2025-05-16 02:16:13,229 | INFO     | mean y: 2483991.4381793477
[2025-05-15 22:16:36] 2025-05-16 02:16:13,229 | INFO     | -- intersect: -1280273538.1601462
[2025-05-15 22:16:36] 2025-05-16 02:16:13,229 | INFO     | intersect: -1280273538.1601462
[2025-05-15 22:16:36] 2025-05-16 02:16:13,232 | INFO     | chi2: 2.3051977095695535
[2025-05-15 22:16:36] 2025-05-16 02:16:13,232 | INFO     | current chi2=2.3051977095695535 (change=40.618718882286906 %)
[2025-05-15 22:16:36] 2025-05-16 02:16:13,235 | INFO     | sum of square deviations: 978982706698.663
[2025-05-15 22:16:36] 2025-05-16 02:16:13,299 | INFO     | sum of deviations: 459828900428.6214
[2025-05-15 22:16:36] 2025-05-16 02:16:13,299 | INFO     | mean x: 1747316969.8977506
[2025-05-15 22:16:36] 2025-05-16 02:16:13,299 | INFO     | mean y: 2488032.097477846
[2025-05-15 22:16:36] 2025-05-16 02:16:13,299 | INFO     | -- intersect: -818228039.2597106
[2025-05-15 22:16:36] 2025-05-16 02:16:13,300 | INFO     | intersect: -818228039.2597106
[2025-05-15 22:16:36] 2025-05-16 02:16:13,302 | INFO     | chi2: 1.098902932652972
[2025-05-15 22:16:36] 2025-05-16 02:16:13,302 | INFO     | current chi2=1.098902932652972 (change=52.32934129289202 %)
[2025-05-15 22:16:36] 2025-05-16 02:16:13,305 | INFO     | sum of square deviations: 969006480757.1189
[2025-05-15 22:16:36] 2025-05-16 02:16:13,594 | INFO     | monitor loop #4106: job 0:6650046640 is in state 'finished'
[2025-05-15 22:16:36] 2025-05-16 02:16:13,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 22:16:36] 2025-05-16 02:16:13,627 | INFO     | sum of deviations: 347747811112.7915
[2025-05-15 22:16:36] 2025-05-16 02:16:13,628 | INFO     | mean x: 1747317122.4008207
[2025-05-15 22:16:36] 2025-05-16 02:16:13,628 | INFO     | mean y: 2489744.6744186045
[2025-05-15 22:16:36] 2025-05-16 02:16:13,628 | INFO     | -- intersect: -624570772.1551775
[2025-05-15 22:16:36] 2025-05-16 02:16:13,628 | INFO     | intersect: -624570772.1551775
[2025-05-15 22:16:36] 2025-05-16 02:16:13,631 | INFO     | chi2: 0.8973056009017533
[2025-05-15 22:16:36] 2025-05-16 02:16:13,631 | INFO     | current chi2=0.8973056009017533 (change=18.34532657625386 %)
[2025-05-15 22:16:36] 2025-05-16 02:16:13,632 | INFO     | left removable region: 40
[2025-05-15 22:16:36] 2025-05-16 02:16:13,637 | INFO     | sum of square deviations: 918222622297.9431
[2025-05-15 22:16:36] 2025-05-16 02:16:13,752 | INFO     | sum of deviations: 359373063997.82336
[2025-05-15 22:16:36] 2025-05-16 02:16:13,752 | INFO     | mean x: 1747317549.4122562
[2025-05-15 22:16:36] 2025-05-16 02:16:13,752 | INFO     | mean y: 2492538.9986072425
[2025-05-15 22:16:36] 2025-05-16 02:16:13,752 | INFO     | -- intersect: -681370879.5893289
[2025-05-15 22:16:36] 2025-05-16 02:16:13,753 | INFO     | intersect: -681370879.5893289
[2025-05-15 22:16:36] 2025-05-16 02:16:13,755 | INFO     | chi2: 0.018875660878468106
[2025-05-15 22:16:36] 2025-05-16 02:16:13,755 | INFO     | -- intersect: -681370879.5893289
[2025-05-15 22:16:36] 2025-05-16 02:16:13,756 | INFO     | current memory leak: 0.39 B/s (using 1436 data points, chi2=0.02)
[2025-05-15 22:16:36] 2025-05-16 02:16:13,759 | INFO     | ..............................
[2025-05-15 22:16:36] 2025-05-16 02:16:13,759 | INFO     | . Timing measurements:
[2025-05-15 22:16:36] 2025-05-16 02:16:13,759 | INFO     | . get job = 0 s
[2025-05-15 22:16:36] 2025-05-16 02:16:13,760 | INFO     | . initial setup = 4 s
[2025-05-15 22:16:36] 2025-05-16 02:16:13,760 | INFO     | . payload setup = 24 s
[2025-05-15 22:16:36] 2025-05-16 02:16:13,760 | INFO     | . stage-in = 0 s
[2025-05-15 22:16:36] 2025-05-16 02:16:13,760 | INFO     | . payload execution = 90394 s
[2025-05-15 22:16:36] 2025-05-16 02:16:13,760 | INFO     | . stage-out = 7 s
[2025-05-15 22:16:36] 2025-05-16 02:16:13,760 | INFO     | . log creation = 1 s
[2025-05-15 22:16:36] 2025-05-16 02:16:13,761 | INFO     | ..............................
[2025-05-15 22:16:36] 2025-05-16 02:16:14,952 | INFO     | 
[2025-05-15 22:16:36] 2025-05-16 02:16:14,952 | INFO     | job summary report
[2025-05-15 22:16:36] 2025-05-16 02:16:14,952 | INFO     | --------------------------------------------------
[2025-05-15 22:16:36] 2025-05-16 02:16:14,952 | INFO     | PanDA job id: 6650046640
[2025-05-15 22:16:36] 2025-05-16 02:16:14,953 | INFO     | task id: 44638099
[2025-05-15 22:16:36] 2025-05-16 02:16:14,953 | INFO     | errors: (none)
[2025-05-15 22:16:36] 2025-05-16 02:16:14,953 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-15 22:16:36] 2025-05-16 02:16:14,953 | INFO     | pilot state: finished 
[2025-05-15 22:16:36] 2025-05-16 02:16:14,953 | INFO     | transexitcode: 0
[2025-05-15 22:16:36] 2025-05-16 02:16:14,953 | INFO     | exeerrorcode: 0
[2025-05-15 22:16:36] 2025-05-16 02:16:14,954 | INFO     | exeerrordiag: 
[2025-05-15 22:16:36] 2025-05-16 02:16:14,954 | INFO     | exitcode: 0
[2025-05-15 22:16:36] 2025-05-16 02:16:14,954 | INFO     | exitmsg: OK
[2025-05-15 22:16:36] 2025-05-16 02:16:14,954 | INFO     | cpuconsumptiontime: 112683 s
[2025-05-15 22:16:36] 2025-05-16 02:16:14,954 | INFO     | nevents: 400
[2025-05-15 22:16:36] 2025-05-16 02:16:14,954 | INFO     | neventsw: 0
[2025-05-15 22:16:36] 2025-05-16 02:16:14,954 | INFO     | pid: 5179
[2025-05-15 22:16:36] 2025-05-16 02:16:14,955 | INFO     | pgrp: 5179
[2025-05-15 22:16:36] 2025-05-16 02:16:14,955 | INFO     | corecount: 8
[2025-05-15 22:16:36] 2025-05-16 02:16:14,955 | INFO     | event service: False
[2025-05-15 22:16:36] 2025-05-16 02:16:14,955 | INFO     | sizes: {0: 2393433, 1: 2393688, 2: 2393716, 11: 2393922, 13: 2393950, 90424: 2455166, 90433: 2464107, 90435: 2464163, 90492: 2464333}
[2025-05-15 22:16:36] 2025-05-16 02:16:14,955 | INFO     | --------------------------------------------------
[2025-05-15 22:16:36] 2025-05-16 02:16:14,955 | INFO     | 
[2025-05-15 22:16:36] 2025-05-16 02:16:14,955 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-15 22:16:36] 2025-05-16 02:16:15,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,449 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,450 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,450 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,450 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,476 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,476 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,476 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,505 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-15 22:16:36] 2025-05-16 02:16:15,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,505 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-15 22:16:36] 2025-05-16 02:16:15,506 | INFO     | job 6650046640 has completed (purged errors)
[2025-05-15 22:16:36] 2025-05-16 02:16:15,506 | INFO     | overall cleanup function is called
[2025-05-15 22:16:36] 2025-05-16 02:16:16,578 | INFO     | --- collectZombieJob: --- 10, [5179]
[2025-05-15 22:16:36] 2025-05-16 02:16:16,578 | INFO     | zombie collector waiting for pid 5179
[2025-05-15 22:16:36] 2025-05-16 02:16:16,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-15 22:16:36] 2025-05-16 02:16:16,579 | INFO     | collected zombie processes
[2025-05-15 22:16:36] 2025-05-16 02:16:16,579 | INFO     | will attempt to kill all subprocesses of pid=5179
[2025-05-15 22:16:36] 2025-05-16 02:16:18,262 | INFO     | process IDs to be killed: [5179] (in reverse order)
[2025-05-15 22:16:36] 2025-05-16 02:16:18,422 | WARNING  | found no corresponding commands to process id(s)
[2025-05-15 22:16:36] 2025-05-16 02:16:18,422 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-15 22:16:36] 2025-05-16 02:16:18,469 | INFO     | did not find any defunct processes belonging to 5179
[2025-05-15 22:16:36] 2025-05-16 02:16:18,648 | INFO     | did not find any defunct processes belonging to 5179
[2025-05-15 22:16:36] 2025-05-16 02:16:18,649 | INFO     | ready for new job
[2025-05-15 22:16:36] 2025-05-16 02:16:18,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-15 22:16:36] 2025-05-16 02:16:18,692 | INFO     | **************************************
[2025-05-15 22:16:36] 2025-05-16 02:16:18,693 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-15 22:16:36] 2025-05-16 02:16:18,693 | INFO     | **************************************
[2025-05-15 22:16:36] 2025-05-16 02:16:18,693 | INFO     | 
[2025-05-15 22:16:36] 2025-05-16 02:16:18,695 | INFO     | architecture information:
[2025-05-15 22:16:36] 2025-05-16 02:16:18,724 | INFO     | executing command: cat /etc/os-release
[2025-05-15 22:16:36] 2025-05-16 02:16:18,886 | INFO     | cat /etc/os-release:
[2025-05-15 22:16:36] NAME="CentOS Linux"
[2025-05-15 22:16:36] VERSION="7 (Core)"
[2025-05-15 22:16:36] ID="centos"
[2025-05-15 22:16:36] ID_LIKE="rhel fedora"
[2025-05-15 22:16:36] VERSION_ID="7"
[2025-05-15 22:16:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-15 22:16:36] ANSI_COLOR="0;31"
[2025-05-15 22:16:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-15 22:16:36] HOME_URL="https://www.centos.org/"
[2025-05-15 22:16:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-15 22:16:36] 
[2025-05-15 22:16:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-15 22:16:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-15 22:16:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-15 22:16:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-15 22:16:36] 
[2025-05-15 22:16:36] 2025-05-16 02:16:18,886 | INFO     | **************************************
[2025-05-15 22:16:36] 2025-05-16 02:16:19,389 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-15 22:16:36] 2025-05-16 02:16:19,553 | INFO     | sufficient remaining disk space (105928196096 B)
[2025-05-15 22:16:36] 2025-05-16 02:16:19,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-15 22:16:36] 2025-05-16 02:16:19,554 | INFO     | current server update state: UPDATING_FINAL
[2025-05-15 22:16:36] 2025-05-16 02:16:19,554 | INFO     | update_server=False
[2025-05-15 22:16:36] 2025-05-16 02:16:19,554 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-15 22:16:36] 2025-05-16 02:16:19,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-15 22:16:36] 2025-05-16 02:16:19,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-15 22:16:36] 2025-05-16 02:16:19,666 | INFO     | aborting loop
[2025-05-15 22:16:36] 2025-05-16 02:16:19,678 | INFO     | found 0 job(s) in 20 queues
[2025-05-15 22:16:36] 2025-05-16 02:16:19,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-15 22:16:36] 2025-05-16 02:16:19,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-15 22:16:36] 2025-05-16 02:16:19,962 | INFO     | all data control threads have been joined
[2025-05-15 22:16:36] 2025-05-16 02:16:20,010 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-15 22:16:36] 2025-05-16 02:16:20,296 | INFO     | all job control threads have been joined
[2025-05-15 22:16:36] 2025-05-16 02:16:20,560 | INFO     | [job] retrieve thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:20,674 | INFO     | [job] job monitor thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:20,775 | INFO     | [payload] validate_post thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:20,969 | INFO     | [data] control thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:20,997 | INFO     | all payload control threads have been joined
[2025-05-15 22:16:36] 2025-05-16 02:16:21,016 | INFO     | [job] queue monitor thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:21,129 | INFO     | [payload] validate_pre thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:21,177 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:21,187 | INFO     | [job] create_data_payload thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:21,302 | INFO     | [job] control thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:21,543 | INFO     | [payload] failed_post thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:21,579 | INFO     | [data] copytool_out thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:21,661 | INFO     | [data] copytool_in thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:21,789 | INFO     | [payload] execute_payloads thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:21,945 | INFO     | [job] validate thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:22,003 | INFO     | [payload] control thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:22,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-15 22:16:36] 2025-05-16 02:16:26,794 | INFO     | [data] queue_monitor thread has finished
[2025-05-15 22:16:36] 2025-05-16 02:16:28,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974201669440)>', '<ExcThread(monitor, started 139973764302592)>']
[2025-05-15 22:16:36] 2025-05-16 02:16:28,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-15 22:16:36] 2025-05-16 02:16:28,730 | INFO     | [monitor] control thread has ended
[2025-05-15 22:16:36] 2025-05-16 02:16:33,350 | INFO     | all workflow threads have been joined
[2025-05-15 22:16:36] 2025-05-16 02:16:33,350 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-15 22:16:36] 2025-05-16 02:16:33,351 | INFO     | traces error code: 0
[2025-05-15 22:16:36] 2025-05-16 02:16:33,351 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-15 22:16:36] 2025-05-16 02:16:33,860 [wrapper] ==== pilot stdout END ====
[2025-05-15 22:16:36] 2025-05-16 02:16:33,875 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-15 22:16:36] 2025-05-16 02:16:33,909 [wrapper] pilotpid: 28672
[2025-05-15 22:16:36] 2025-05-16 02:16:33,960 [wrapper] Pilot exit status: 0
[2025-05-15 22:16:36] 2025-05-16 02:16:34,089 [wrapper] pandaids: 6650046640
[2025-05-15 22:16:36] 2025-05-16 02:16:34,256 [wrapper] cleanup supervisor_pilot 29598 28674
[2025-05-15 22:16:36] 2025-05-16 02:16:34,261 [wrapper] Test setup, not cleaning
[2025-05-15 22:16:36] 2025-05-16 02:16:34,276 [wrapper] apfmon messages muted
[2025-05-15 22:16:36] 2025-05-16 02:16:34,289 [wrapper] ==== wrapper stdout END ====
[2025-05-15 22:16:36] 2025-05-16 02:16:34,333 [wrapper] ==== wrapper stderr END ====
[2025-05-15 22:16:36]  *** Error codes and diagnostics ***
[2025-05-15 22:16:36]     "exeErrorCode": 0,
[2025-05-15 22:16:36]     "exeErrorDiag": "",
[2025-05-15 22:16:36]     "pilotErrorCode": 0,
[2025-05-15 22:16:36]     "pilotErrorDiag": "",
[2025-05-15 22:16:36]  *** Listing of results directory ***
[2025-05-15 22:16:36] total 422380
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas    495897 May 14 17:45 pilot3.tar.gz
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas      5111 May 14 18:23 queuedata.json
[2025-05-15 22:16:36] -rwx------ 1 boincer umatlas     37140 May 14 18:24 runpilot2-wrapper.sh
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas       100 May 14 21:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-15 22:16:36] -rwxr-xr-x 1 boincer umatlas      7986 May 14 21:06 run_atlas
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas       105 May 14 21:06 job.xml
[2025-05-15 22:16:36] -rw-r--r-- 2 boincer umatlas 220423538 May 14 21:06 EVNT.44638096._001062.pool.root.1
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas      5942 May 14 21:06 init_data.xml
[2025-05-15 22:16:36] -rw-r--r-- 2 boincer umatlas     17569 May 14 21:06 start_atlas.sh
[2025-05-15 22:16:36] drwxrwx--x 2 boincer umatlas      4096 May 14 21:06 shared
[2025-05-15 22:16:36] -rw-r--r-- 2 boincer umatlas    508877 May 14 21:06 input.tar.gz
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas         0 May 14 21:06 boinc_lockfile
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas      2538 May 14 21:06 pandaJob.out
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas       424 May 14 21:06 setup.sh.local
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas    993874 May 14 21:07 agis_schedconf.cvmfs.json
[2025-05-15 22:16:36] drwx------ 4 boincer umatlas      4096 May 14 21:07 pilot3
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas 194361211 May 15 22:13 HITS.44638099._014149.pool.root.1
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas       532 May 15 22:13 boinc_task_state.xml
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas      1061 May 15 22:15 memory_monitor_summary.json
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas   1596741 May 15 22:15 agis_ddmendpoints.agis.ALL.json
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas    980493 May 15 22:15 log.44638099._014149.job.log.tgz.1
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas        95 May 15 22:15 pilot_heartbeat.json
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas      7748 May 15 22:16 heartbeat.json
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas      8192 May 15 22:16 boinc_mmap_file
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas      4354 May 15 22:16 pilotlog.txt
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas        29 May 15 22:16 wrapper_checkpoint.txt
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas   5965963 May 15 22:16 log.44638099._014149.job.log.1
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas       357 May 15 22:16 output.list
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas       620 May 15 22:16 runtime_log
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas   6963200 May 15 22:16 result.tar.gz
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas     11004 May 15 22:16 runtime_log.err
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas       665 May 15 22:16 QymLDmXhZZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDaHKDmlkmlFo.diag
[2025-05-15 22:16:36] -rw-r--r-- 1 boincer umatlas     20841 May 15 22:16 stderr.txt
[2025-05-15 22:16:36] HITS file was successfully produced:
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas 194361211 May 15 22:13 shared/HITS.pool.root.1
[2025-05-15 22:16:36]  *** Contents of shared directory: ***
[2025-05-15 22:16:36] total 412392
[2025-05-15 22:16:36] -rw-r--r-- 2 boincer umatlas 220423538 May 14 21:06 ATLAS.root_0
[2025-05-15 22:16:36] -rw-r--r-- 2 boincer umatlas     17569 May 14 21:06 start_atlas.sh
[2025-05-15 22:16:36] -rw-r--r-- 2 boincer umatlas    508877 May 14 21:06 input.tar.gz
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas 194361211 May 15 22:13 HITS.pool.root.1
[2025-05-15 22:16:36] -rw------- 1 boincer umatlas   6963200 May 15 22:16 result.tar.gz
22:16:38 (44395): run_atlas exited; CPU time 116810.544618
22:16:38 (44395): called boinc_finish(0)

</stderr_txt>
]]>

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