Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:16:09 (1847148): wrapper (7.7.26015): starting
15:16:09 (1847148): wrapper: running run_atlas (--nthreads 6)
[2025-05-15 15:16:09] Arguments: --nthreads 6
[2025-05-15 15:16:09] Threads: 6
[2025-05-15 15:16:09] Checking for CVMFS
[2025-05-15 15:16:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-15 15:16:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-15 15:16:09] Running cvmfs_config stat atlas.cern.ch
[2025-05-15 15:16:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-15 15:16:09] 2.11.5.0 1438367 740 65340 146008 1 61 40065697 52428800 929 130560 0 1111408 99.994 228878 75 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-15 15:16:09] CVMFS is ok
[2025-05-15 15:16:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-15 15:16:09] Checking for apptainer binary...
[2025-05-15 15:16:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-15 15:16:09] Running /usr/bin/apptainer --version
[2025-05-15 15:16:09] apptainer version 1.3.6-1.el9
[2025-05-15 15:16:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-15 15:16:10] testio002
[2025-05-15 15:16:10] apptainer works
[2025-05-15 15:16:10] Set ATHENA_PROC_NUMBER=6
[2025-05-15 15:16:10] Set ATHENA_CORE_NUMBER=6
[2025-05-15 15:16:10] Starting ATLAS job with PandaID=6650008767
[2025-05-15 15:16:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-15 16:45:25]  *** The last 200 lines of the pilot log: ***
[2025-05-15 16:45:25] 2025-05-15 07:44:24,794 | INFO     | monitor loop #406: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:24,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:27,297 | INFO     | monitor loop #407: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:27,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:29,799 | INFO     | monitor loop #408: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:29,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:31,861 | INFO     | PID=1850865 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-15 16:45:25] 2025-05-15 07:44:31,861 | INFO     | .. there are 2 such processes running
[2025-05-15 16:45:25] 2025-05-15 07:44:32,301 | INFO     | monitor loop #409: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:32,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:34,804 | INFO     | monitor loop #410: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:34,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:37,307 | INFO     | monitor loop #411: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:37,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:39,810 | INFO     | monitor loop #412: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:39,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:42,313 | INFO     | monitor loop #413: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:42,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:44,816 | INFO     | monitor loop #414: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:44,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:47,319 | INFO     | monitor loop #415: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:47,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:49,822 | INFO     | monitor loop #416: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:49,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:52,325 | INFO     | monitor loop #417: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:52,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:53,962 | INFO     | PID=1850865 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-15 16:45:25] 2025-05-15 07:44:53,962 | INFO     | .. there are 2 such processes running
[2025-05-15 16:45:25] 2025-05-15 07:44:54,827 | INFO     | monitor loop #418: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:54,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:54,963 | INFO     | 5322s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-15 16:45:25] 2025-05-15 07:44:57,330 | INFO     | monitor loop #419: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:57,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:44:59,832 | INFO     | monitor loop #420: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:44:59,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:45:02,334 | INFO     | monitor loop #421: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:45:02,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:45:04,836 | INFO     | monitor loop #422: job 0:6650008767 is in state 'finished'
[2025-05-15 16:45:25] 2025-05-15 07:45:04,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-15 16:45:25] 2025-05-15 07:45:06,633 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-15 16:45:25] 2025-05-15 07:45:06,633 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6650008767/memory_monitor_summary.json (trf name=prmon)
[2025-05-15 16:45:25] 2025-05-15 07:45:06,633 | INFO     | extracted standard info from prmon json
[2025-05-15 16:45:25] 2025-05-15 07:45:06,634 | INFO     | extracted standard memory fields from prmon json
[2025-05-15 16:45:25] 2025-05-15 07:45:06,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-15 16:45:25] 2025-05-15 07:45:06,634 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-15 16:45:25] 2025-05-15 07:45:06,634 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-15 16:45:25] 2025-05-15 07:45:06,635 | INFO     | fitting pss+swap vs Time
[2025-05-15 16:45:25] 2025-05-15 07:45:06,635 | INFO     | sum of square deviations: 152858680.0
[2025-05-15 16:45:25] 2025-05-15 07:45:06,635 | INFO     | sum of deviations: 16653491233.0
[2025-05-15 16:45:25] 2025-05-15 07:45:06,635 | INFO     | mean x: 1747292479.0
[2025-05-15 16:45:25] 2025-05-15 07:45:06,635 | INFO     | mean y: 2371432.7215189873
[2025-05-15 16:45:25] 2025-05-15 07:45:06,635 | INFO     | -- intersect: -190359863675.63696
[2025-05-15 16:45:25] 2025-05-15 07:45:06,635 | INFO     | intersect: -190359863675.63696
[2025-05-15 16:45:25] 2025-05-15 07:45:06,635 | INFO     | chi2: 1.7431679288182391
[2025-05-15 16:45:25] 2025-05-15 07:45:06,635 | INFO     | -- intersect: -190359863675.63696
[2025-05-15 16:45:25] 2025-05-15 07:45:06,635 | INFO     | current memory leak: 108.95 B/s (using 79 data points, chi2=1.74)
[2025-05-15 16:45:25] 2025-05-15 07:45:06,636 | INFO     | ..............................
[2025-05-15 16:45:25] 2025-05-15 07:45:06,636 | INFO     | . Timing measurements:
[2025-05-15 16:45:25] 2025-05-15 07:45:06,636 | INFO     | . get job = 0 s
[2025-05-15 16:45:25] 2025-05-15 07:45:06,636 | INFO     | . initial setup = 5 s
[2025-05-15 16:45:25] 2025-05-15 07:45:06,636 | INFO     | . payload setup = 2 s
[2025-05-15 16:45:25] 2025-05-15 07:45:06,636 | INFO     | . stage-in = 0 s
[2025-05-15 16:45:25] 2025-05-15 07:45:06,636 | INFO     | . payload execution = 5217 s
[2025-05-15 16:45:25] 2025-05-15 07:45:06,636 | INFO     | . stage-out = 0 s
[2025-05-15 16:45:25] 2025-05-15 07:45:06,636 | INFO     | . log creation = 0 s
[2025-05-15 16:45:25] 2025-05-15 07:45:06,636 | INFO     | ..............................
[2025-05-15 16:45:25] 2025-05-15 07:45:06,684 | INFO     | 
[2025-05-15 16:45:25] 2025-05-15 07:45:06,684 | INFO     | job summary report
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | --------------------------------------------------
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | PanDA job id: 6650008767
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | task id: 44638099
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | errors: (none)
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | pilot state: finished 
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | transexitcode: 0
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | exeerrorcode: 0
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | exeerrordiag: 
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | exitcode: 0
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | exitmsg: OK
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | cpuconsumptiontime: 25710 s
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | nevents: 400
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | neventsw: 0
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | pid: 1857421
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | pgrp: 1857421
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | corecount: 6
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | event service: False
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | sizes: {0: 2393660, 2: 2393866, 11: 2393894, 5223: 2429140, 5225: 2429140, 5315: 2429310}
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | --------------------------------------------------
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | 
[2025-05-15 16:45:25] 2025-05-15 07:45:06,685 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-15 16:45:25] 2025-05-15 07:45:06,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-15 16:45:25] 2025-05-15 07:45:06,697 | INFO     | job 6650008767 has completed (purged errors)
[2025-05-15 16:45:25] 2025-05-15 07:45:06,697 | INFO     | overall cleanup function is called
[2025-05-15 16:45:25] 2025-05-15 07:45:07,703 | INFO     | --- collectZombieJob: --- 10, [1857421]
[2025-05-15 16:45:25] 2025-05-15 07:45:07,703 | INFO     | zombie collector waiting for pid 1857421
[2025-05-15 16:45:25] 2025-05-15 07:45:07,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-15 16:45:25] 2025-05-15 07:45:07,703 | INFO     | collected zombie processes
[2025-05-15 16:45:25] 2025-05-15 07:45:07,703 | INFO     | will attempt to kill all subprocesses of pid=1857421
[2025-05-15 16:45:25] 2025-05-15 07:45:07,758 | INFO     | process IDs to be killed: [1857421] (in reverse order)
[2025-05-15 16:45:25] 2025-05-15 07:45:07,778 | WARNING  | found no corresponding commands to process id(s)
[2025-05-15 16:45:25] 2025-05-15 07:45:07,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-15 16:45:25] 2025-05-15 07:45:07,780 | INFO     | did not find any defunct processes belonging to 1857421
[2025-05-15 16:45:25] 2025-05-15 07:45:07,781 | INFO     | did not find any defunct processes belonging to 1857421
[2025-05-15 16:45:25] 2025-05-15 07:45:07,781 | INFO     | ready for new job
[2025-05-15 16:45:25] 2025-05-15 07:45:07,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-15 16:45:25] 2025-05-15 07:45:07,782 | INFO     | **************************************
[2025-05-15 16:45:25] 2025-05-15 07:45:07,782 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-15 16:45:25] 2025-05-15 07:45:07,782 | INFO     | **************************************
[2025-05-15 16:45:25] 2025-05-15 07:45:07,782 | INFO     | 
[2025-05-15 16:45:25] 2025-05-15 07:45:07,783 | INFO     | architecture information:
[2025-05-15 16:45:25] 2025-05-15 07:45:07,783 | INFO     | executing command: cat /etc/os-release
[2025-05-15 16:45:25] 2025-05-15 07:45:07,789 | INFO     | cat /etc/os-release:
[2025-05-15 16:45:25] NAME="CentOS Linux"
[2025-05-15 16:45:25] VERSION="7 (Core)"
[2025-05-15 16:45:25] ID="centos"
[2025-05-15 16:45:25] ID_LIKE="rhel fedora"
[2025-05-15 16:45:25] VERSION_ID="7"
[2025-05-15 16:45:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-15 16:45:25] ANSI_COLOR="0;31"
[2025-05-15 16:45:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-15 16:45:25] HOME_URL="https://www.centos.org/"
[2025-05-15 16:45:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-15 16:45:25] 
[2025-05-15 16:45:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-15 16:45:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-15 16:45:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-15 16:45:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-15 16:45:25] 
[2025-05-15 16:45:25] 2025-05-15 07:45:07,789 | INFO     | **************************************
[2025-05-15 16:45:25] 2025-05-15 07:45:08,291 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-05-15 16:45:25] 2025-05-15 07:45:08,298 | INFO     | sufficient remaining disk space (304593502208 B)
[2025-05-15 16:45:25] 2025-05-15 07:45:08,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-15 16:45:25] 2025-05-15 07:45:08,298 | INFO     | current server update state: UPDATING_FINAL
[2025-05-15 16:45:25] 2025-05-15 07:45:08,298 | INFO     | update_server=False
[2025-05-15 16:45:25] 2025-05-15 07:45:08,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-15 16:45:25] 2025-05-15 07:45:08,299 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-15 16:45:25] 2025-05-15 07:45:08,299 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-15 16:45:25] 2025-05-15 07:45:08,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-15 16:45:25] 2025-05-15 07:45:08,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-15 16:45:25] 2025-05-15 07:45:08,299 | INFO     | found 0 job(s) in 20 queues
[2025-05-15 16:45:25] 2025-05-15 07:45:08,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-15 16:45:25] 2025-05-15 07:45:08,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-15 16:45:25] 2025-05-15 07:45:08,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-15 16:45:25] 2025-05-15 07:45:08,344 | INFO     | aborting loop
[2025-05-15 16:45:25] 2025-05-15 07:45:08,885 | INFO     | all payload control threads have been joined
[2025-05-15 16:45:25] 2025-05-15 07:45:09,286 | INFO     | all data control threads have been joined
[2025-05-15 16:45:25] 2025-05-15 07:45:09,303 | INFO     | [job] queue monitor thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:09,304 | INFO     | [job] retrieve thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:09,349 | INFO     | [job] job monitor thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:09,396 | INFO     | all job control threads have been joined
[2025-05-15 16:45:25] 2025-05-15 07:45:09,428 | INFO     | [data] copytool_in thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:09,782 | INFO     | [payload] validate_post thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:09,816 | INFO     | [payload] execute_payloads thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:09,890 | INFO     | [payload] control thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:10,291 | INFO     | [data] control thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:10,304 | INFO     | [data] copytool_out thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:10,374 | INFO     | [payload] failed_post thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:10,401 | INFO     | [job] control thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:10,597 | INFO     | [job] validate thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:10,602 | INFO     | [job] create_data_payload thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:10,702 | INFO     | [payload] validate_pre thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:12,304 | INFO     | [data] queue_monitor thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:19,300 | INFO     | job.realtimelogging is not enabled
[2025-05-15 16:45:25] 2025-05-15 07:45:20,305 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-15 16:45:25] 2025-05-15 07:45:20,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569602185024)>', '<ExcThread(monitor, started 140568977995520)>']
[2025-05-15 16:45:25] 2025-05-15 07:45:21,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-15 16:45:25] 2025-05-15 07:45:21,363 | INFO     | [monitor] control thread has ended
[2025-05-15 16:45:25] 2025-05-15 07:45:25,656 | INFO     | all workflow threads have been joined
[2025-05-15 16:45:25] 2025-05-15 07:45:25,656 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-15 16:45:25] 2025-05-15 07:45:25,656 | INFO     | traces error code: 0
[2025-05-15 16:45:25] 2025-05-15 07:45:25,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-15 16:45:25] 2025-05-15 07:45:25,714 [wrapper] ==== pilot stdout END ====
[2025-05-15 16:45:25] 2025-05-15 07:45:25,715 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-15 16:45:25] 2025-05-15 07:45:25,716 [wrapper] pilotpid: 1850865
[2025-05-15 16:45:25] 2025-05-15 07:45:25,717 [wrapper] Pilot exit status: 0
[2025-05-15 16:45:25] 2025-05-15 07:45:25,721 [wrapper] pandaids: 6650008767
[2025-05-15 16:45:25] 2025-05-15 07:45:25,732 [wrapper] cleanup supervisor_pilot 1892336 1850866
[2025-05-15 16:45:25] 2025-05-15 07:45:25,733 [wrapper] Test setup, not cleaning
[2025-05-15 16:45:25] 2025-05-15 07:45:25,734 [wrapper] apfmon messages muted
[2025-05-15 16:45:25] 2025-05-15 07:45:25,735 [wrapper] ==== wrapper stdout END ====
[2025-05-15 16:45:25] 2025-05-15 07:45:25,736 [wrapper] ==== wrapper stderr END ====
[2025-05-15 16:45:25]  *** Error codes and diagnostics ***
[2025-05-15 16:45:25]     "exeErrorCode": 0,
[2025-05-15 16:45:25]     "exeErrorDiag": "",
[2025-05-15 16:45:25]     "pilotErrorCode": 0,
[2025-05-15 16:45:25]     "pilotErrorDiag": "",
[2025-05-15 16:45:25]  *** Listing of results directory ***
[2025-05-15 16:45:25] total 420064
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc    495897 May 15 02:39 pilot3.tar.gz
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc      5111 May 15 03:33 queuedata.json
[2025-05-15 16:45:25] -rwx------. 1 boinc boinc     37140 May 15 03:33 runpilot2-wrapper.sh
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc       100 May 15 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-15 16:45:25] -rwxr-xr-x. 1 boinc boinc      7986 May 15 15:16 run_atlas
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc       105 May 15 15:16 job.xml
[2025-05-15 16:45:25] -rw-r--r--. 2 boinc boinc 222033084 May 15 15:16 EVNT.44638096._000873.pool.root.1
[2025-05-15 16:45:25] -rw-r--r--. 2 boinc boinc     17569 May 15 15:16 start_atlas.sh
[2025-05-15 16:45:25] drwxrwx--x. 2 boinc boinc        68 May 15 15:16 shared
[2025-05-15 16:45:25] -rw-r--r--. 2 boinc boinc    508873 May 15 15:16 input.tar.gz
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc      9627 May 15 15:16 init_data.xml
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc         0 May 15 15:16 boinc_lockfile
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc      2538 May 15 15:16 pandaJob.out
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc       424 May 15 15:16 setup.sh.local
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc    995394 May 15 15:16 agis_schedconf.cvmfs.json
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc   1596741 May 15 15:16 agis_ddmendpoints.agis.ALL.json
[2025-05-15 16:45:25] drwx------. 4 boinc boinc      4096 May 15 15:16 pilot3
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc       529 May 15 16:43 boinc_task_state.xml
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc 202649942 May 15 16:43 HITS.44638099._011294.pool.root.1
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc      1025 May 15 16:43 memory_monitor_summary.json
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc    286103 May 15 16:43 log.44638099._011294.job.log.tgz.1
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc        95 May 15 16:44 pilot_heartbeat.json
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc      7696 May 15 16:45 heartbeat.json
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc        27 May 15 16:45 wrapper_checkpoint.txt
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc      8192 May 15 16:45 boinc_mmap_file
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc      4549 May 15 16:45 pilotlog.txt
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc    520926 May 15 16:45 log.44638099._011294.job.log.1
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc       357 May 15 16:45 output.list
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc       620 May 15 16:45 runtime_log
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc    829440 May 15 16:45 result.tar.gz
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc     10971 May 15 16:45 runtime_log.err
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc       641 May 15 16:45 rmTMDmE6VZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO3GKDm5a1dLn.diag
[2025-05-15 16:45:25] -rw-r--r--. 1 boinc boinc     22084 May 15 16:45 stderr.txt
[2025-05-15 16:45:25] HITS file was successfully produced:
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc 202649942 May 15 16:43 shared/HITS.pool.root.1
[2025-05-15 16:45:25]  *** Contents of shared directory: ***
[2025-05-15 16:45:25] total 416068
[2025-05-15 16:45:25] -rw-r--r--. 2 boinc boinc 222033084 May 15 15:16 ATLAS.root_0
[2025-05-15 16:45:25] -rw-r--r--. 2 boinc boinc     17569 May 15 15:16 start_atlas.sh
[2025-05-15 16:45:25] -rw-r--r--. 2 boinc boinc    508873 May 15 15:16 input.tar.gz
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc 202649942 May 15 16:43 HITS.pool.root.1
[2025-05-15 16:45:25] -rw-------. 1 boinc boinc    829440 May 15 16:45 result.tar.gz
16:45:27 (1847148): run_atlas exited; CPU time 25737.153562
16:45:27 (1847148): called boinc_finish(0)

</stderr_txt>
]]>

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