Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:35:38 (10090): wrapper (7.7.26015): starting
16:35:38 (10090): wrapper: running run_atlas (--nthreads 12)
[2025-05-14 16:35:38] Arguments: --nthreads 12
[2025-05-14 16:35:38] Threads: 12
[2025-05-14 16:35:38] Checking for CVMFS
[2025-05-14 16:35:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-14 16:35:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-14 16:35:38] Running cvmfs_config stat atlas.cern.ch
[2025-05-14 16:35:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-14 16:35:38] 2.10.0.0 16031 229 68844 145996 3 56 13444474 16777216 922 130560 0 595047 99.995 146266 13718 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-05-14 16:35:38] CVMFS is ok
[2025-05-14 16:35:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-14 16:35:38] Checking for apptainer binary...
[2025-05-14 16:35:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-14 16:35:38] Running /usr/bin/apptainer --version
[2025-05-14 16:35:38] apptainer version 1.3.6-150600.4.9.1
[2025-05-14 16:35:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-14 16:35:39] boinc-runner
[2025-05-14 16:35:39] apptainer works
[2025-05-14 16:35:39] Set ATHENA_PROC_NUMBER=12
[2025-05-14 16:35:39] Set ATHENA_CORE_NUMBER=12
[2025-05-14 16:35:39] Starting ATLAS job with PandaID=6649971333
[2025-05-14 16:35:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-14 17:19:48]  *** The last 200 lines of the pilot log: ***
[2025-05-14 17:19:48]  filetype=log
[2025-05-14 17:19:48]  guid=57b89786-5c45-4d54-a5f5-1f45c16aa27d
[2025-05-14 17:19:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-14 17:19:48]  is_altstaged=None
[2025-05-14 17:19:48]  is_tar=False
[2025-05-14 17:19:48]  lfn=log.44638099._007932.job.log.tgz.1
[2025-05-14 17:19:48]  mtime=0
[2025-05-14 17:19:48]  protocol_id=None
[2025-05-14 17:19:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-14 17:19:48]  replicas=None
[2025-05-14 17:19:48]  scope=mc23_13p6TeV
[2025-05-14 17:19:48]  status=None
[2025-05-14 17:19:48]  status_code=0
[2025-05-14 17:19:48]  storage_token=
[2025-05-14 17:19:48]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6649971333/log.44638099._007932.job.log.tgz.1
[2025-05-14 17:19:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/20/log.44638099._007932.job.log.tgz.1
[2025-05-14 17:19:48]  workdir=None
[2025-05-14 17:19:48] ]
[2025-05-14 17:19:48] 2025-05-14 22:19:27,556 | INFO     | transferring file log.44638099._007932.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6649971333/log.44638099._007932.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-14 17:19:48] 2025-05-14 22:19:27,556 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6649971333/log.44638099._007932.job.log.tgz.1 /var/lib/boinc/slots/0/log.44638099._007932.job
[2025-05-14 17:19:48] 2025-05-14 22:19:27,569 | INFO     | adding to output.list: log.44638099._007932.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/20/log.44638099._007932.job.log.tg
[2025-05-14 17:19:48] 2025-05-14 22:19:27,569 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-14 17:19:48] 2025-05-14 22:19:27,569 | INFO     | summary of transferred files:
[2025-05-14 17:19:48] 2025-05-14 22:19:27,569 | INFO     |  -- lfn=log.44638099._007932.job.log.tgz.1, status_code=0, status=transferred
[2025-05-14 17:19:48] 2025-05-14 22:19:27,569 | INFO     | stage-out finished correctly
[2025-05-14 17:19:48] 2025-05-14 22:19:27,614 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-14 17:19:48] 2025-05-14 22:19:29,713 | INFO     | monitor loop #203: job 0:6649971333 is in state 'finished'
[2025-05-14 17:19:48] 2025-05-14 22:19:29,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-14 17:19:48] 2025-05-14 22:19:30,146 | INFO     | job 6649971333 has state=finished
[2025-05-14 17:19:48] 2025-05-14 22:19:30,146 | INFO     | preparing for final server update for job 6649971333 in state='finished'
[2025-05-14 17:19:48] 2025-05-14 22:19:30,147 | INFO     | this job has now completed (state=finished)
[2025-05-14 17:19:48] 2025-05-14 22:19:30,147 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-14 17:19:48] 2025-05-14 22:19:30,147 | INFO     | log transfer has been attempted: DONE
[2025-05-14 17:19:48] 2025-05-14 22:19:30,147 | INFO     | job 6649971333 has finished - writing final server update
[2025-05-14 17:19:48] 2025-05-14 22:19:30,147 | INFO     | total number of processed events: 400 (read)
[2025-05-14 17:19:48] 2025-05-14 22:19:30,149 | INFO     | executing command: lscpu
[2025-05-14 17:19:48] 2025-05-14 22:19:30,170 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-14 17:19:48] 2025-05-14 22:19:32,216 | INFO     | monitor loop #204: job 0:6649971333 is in state 'finished'
[2025-05-14 17:19:48] 2025-05-14 22:19:32,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-14 17:19:48] 2025-05-14 22:19:34,718 | INFO     | monitor loop #205: job 0:6649971333 is in state 'finished'
[2025-05-14 17:19:48] 2025-05-14 22:19:34,718 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-14 17:19:48] 2025-05-14 22:19:36,070 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-14 17:19:48] 2025-05-14 22:19:36,070 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6649971333/memory_monitor_summary.json (trf name=prmon)
[2025-05-14 17:19:48] 2025-05-14 22:19:36,070 | INFO     | extracted standard info from prmon json
[2025-05-14 17:19:48] 2025-05-14 22:19:36,071 | INFO     | extracted standard memory fields from prmon json
[2025-05-14 17:19:48] 2025-05-14 22:19:36,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-14 17:19:48] 2025-05-14 22:19:36,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-14 17:19:48] 2025-05-14 22:19:36,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-14 17:19:48] 2025-05-14 22:19:36,071 | INFO     | fitting pss+swap vs Time
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | sum of square deviations: 14456085.0
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | sum of deviations: 2795803880.5
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | mean x: 1747259937.5
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | mean y: 2777944.972222222
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | -- intersect: -337916936383.26306
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | intersect: -337916936383.26306
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | chi2: 0.7312766210038232
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | -- intersect: -337916936383.26306
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | current memory leak: 193.40 B/s (using 36 data points, chi2=0.73)
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | ..............................
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | . Timing measurements:
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | . get job = 0 s
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | . initial setup = 3 s
[2025-05-14 17:19:48] 2025-05-14 22:19:36,072 | INFO     | . payload setup = 3 s
[2025-05-14 17:19:48] 2025-05-14 22:19:36,073 | INFO     | . stage-in = 0 s
[2025-05-14 17:19:48] 2025-05-14 22:19:36,073 | INFO     | . payload execution = 2601 s
[2025-05-14 17:19:48] 2025-05-14 22:19:36,073 | INFO     | . stage-out = 0 s
[2025-05-14 17:19:48] 2025-05-14 22:19:36,073 | INFO     | . log creation = 0 s
[2025-05-14 17:19:48] 2025-05-14 22:19:36,073 | INFO     | ..............................
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | 
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | job summary report
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | --------------------------------------------------
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | PanDA job id: 6649971333
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | task id: 44638099
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | errors: (none)
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | pilot state: finished 
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | transexitcode: 0
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | exeerrorcode: 0
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | exeerrordiag: 
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | exitcode: 0
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | exitmsg: OK
[2025-05-14 17:19:48] 2025-05-14 22:19:36,126 | INFO     | cpuconsumptiontime: 25171 s
[2025-05-14 17:19:48] 2025-05-14 22:19:36,127 | INFO     | nevents: 400
[2025-05-14 17:19:48] 2025-05-14 22:19:36,127 | INFO     | neventsw: 0
[2025-05-14 17:19:48] 2025-05-14 22:19:36,127 | INFO     | pid: 20711
[2025-05-14 17:19:48] 2025-05-14 22:19:36,127 | INFO     | pgrp: 20711
[2025-05-14 17:19:48] 2025-05-14 22:19:36,127 | INFO     | corecount: 12
[2025-05-14 17:19:48] 2025-05-14 22:19:36,127 | INFO     | event service: False
[2025-05-14 17:19:48] 2025-05-14 22:19:36,127 | INFO     | sizes: {0: 2393707, 1: 2393707, 3: 2393941, 11: 2393969, 2608: 2428132, 2617: 2428246}
[2025-05-14 17:19:48] 2025-05-14 22:19:36,127 | INFO     | --------------------------------------------------
[2025-05-14 17:19:48] 2025-05-14 22:19:36,127 | INFO     | 
[2025-05-14 17:19:48] 2025-05-14 22:19:36,127 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-05-14 17:19:48] 2025-05-14 22:19:36,137 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,137 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,137 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,137 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,137 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,137 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,137 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,138 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,138 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,138 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,138 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-14 17:19:48] 2025-05-14 22:19:36,138 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,138 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-14 17:19:48] 2025-05-14 22:19:36,138 | INFO     | job 6649971333 has completed (purged errors)
[2025-05-14 17:19:48] 2025-05-14 22:19:36,138 | INFO     | overall cleanup function is called
[2025-05-14 17:19:48] 2025-05-14 22:19:37,146 | INFO     | --- collectZombieJob: --- 10, [20711]
[2025-05-14 17:19:48] 2025-05-14 22:19:37,146 | INFO     | zombie collector waiting for pid 20711
[2025-05-14 17:19:48] 2025-05-14 22:19:37,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-14 17:19:48] 2025-05-14 22:19:37,146 | INFO     | collected zombie processes
[2025-05-14 17:19:48] 2025-05-14 22:19:37,146 | INFO     | will attempt to kill all subprocesses of pid=20711
[2025-05-14 17:19:48] 2025-05-14 22:19:37,192 | INFO     | process IDs to be killed: [20711] (in reverse order)
[2025-05-14 17:19:48] 2025-05-14 22:19:37,221 | WARNING  | found no corresponding commands to process id(s)
[2025-05-14 17:19:48] 2025-05-14 22:19:37,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-14 17:19:48] 2025-05-14 22:19:37,224 | INFO     | did not find any defunct processes belonging to 20711
[2025-05-14 17:19:48] 2025-05-14 22:19:37,226 | INFO     | did not find any defunct processes belonging to 20711
[2025-05-14 17:19:48] 2025-05-14 22:19:37,226 | INFO     | ready for new job
[2025-05-14 17:19:48] 2025-05-14 22:19:37,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-14 17:19:48] 2025-05-14 22:19:37,228 | INFO     | **************************************
[2025-05-14 17:19:48] 2025-05-14 22:19:37,228 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-14 17:19:48] 2025-05-14 22:19:37,228 | INFO     | **************************************
[2025-05-14 17:19:48] 2025-05-14 22:19:37,228 | INFO     | 
[2025-05-14 17:19:48] 2025-05-14 22:19:37,229 | INFO     | architecture information:
[2025-05-14 17:19:48] 2025-05-14 22:19:37,230 | INFO     | executing command: cat /etc/os-release
[2025-05-14 17:19:48] 2025-05-14 22:19:37,236 | INFO     | cat /etc/os-release:
[2025-05-14 17:19:48] NAME="CentOS Linux"
[2025-05-14 17:19:48] VERSION="7 (Core)"
[2025-05-14 17:19:48] ID="centos"
[2025-05-14 17:19:48] ID_LIKE="rhel fedora"
[2025-05-14 17:19:48] VERSION_ID="7"
[2025-05-14 17:19:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-14 17:19:48] ANSI_COLOR="0;31"
[2025-05-14 17:19:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-14 17:19:48] HOME_URL="https://www.centos.org/"
[2025-05-14 17:19:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-14 17:19:48] 
[2025-05-14 17:19:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-14 17:19:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-14 17:19:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-14 17:19:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-14 17:19:48] 
[2025-05-14 17:19:48] 2025-05-14 22:19:37,236 | INFO     | **************************************
[2025-05-14 17:19:48] 2025-05-14 22:19:37,739 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-05-14 17:19:48] 2025-05-14 22:19:37,750 | INFO     | sufficient remaining disk space (3892647559168 B)
[2025-05-14 17:19:48] 2025-05-14 22:19:37,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-14 17:19:48] 2025-05-14 22:19:37,750 | INFO     | current server update state: UPDATING_FINAL
[2025-05-14 17:19:48] 2025-05-14 22:19:37,750 | INFO     | update_server=False
[2025-05-14 17:19:48] 2025-05-14 22:19:37,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-14 17:19:48] 2025-05-14 22:19:37,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-14 17:19:48] 2025-05-14 22:19:38,046 | INFO     | found 0 job(s) in 20 queues
[2025-05-14 17:19:48] 2025-05-14 22:19:38,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-14 17:19:48] 2025-05-14 22:19:38,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-14 17:19:48] 2025-05-14 22:19:38,098 | INFO     | all data control threads have been joined
[2025-05-14 17:19:48] 2025-05-14 22:19:38,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-14 17:19:48] 2025-05-14 22:19:38,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-14 17:19:48] 2025-05-14 22:19:38,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-14 17:19:48] 2025-05-14 22:19:38,227 | INFO     | aborting loop
[2025-05-14 17:19:48] 2025-05-14 22:19:38,390 | INFO     | all payload control threads have been joined
[2025-05-14 17:19:48] 2025-05-14 22:19:38,754 | INFO     | [job] queue monitor thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:38,755 | INFO     | [job] retrieve thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:38,774 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:38,800 | INFO     | all job control threads have been joined
[2025-05-14 17:19:48] 2025-05-14 22:19:39,018 | INFO     | [job] create_data_payload thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:39,078 | INFO     | [payload] validate_pre thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:39,102 | INFO     | [data] control thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:39,182 | INFO     | [payload] validate_post thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:39,202 | INFO     | [data] copytool_in thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:39,230 | INFO     | [job] job monitor thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:39,394 | INFO     | [payload] control thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:39,802 | INFO     | [job] control thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:39,834 | INFO     | [payload] failed_post thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:39,938 | INFO     | [payload] execute_payloads thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:40,126 | INFO     | [data] copytool_out thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:40,158 | INFO     | [job] validate thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:42,146 | INFO     | [data] queue_monitor thread has finished
[2025-05-14 17:19:48] 2025-05-14 22:19:43,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140004114831168)>', '<ExcThread(monitor, started 140003602568960)>']
[2025-05-14 17:19:48] 2025-05-14 22:19:44,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-14 17:19:48] 2025-05-14 22:19:44,071 | INFO     | [monitor] control thread has ended
[2025-05-14 17:19:48] 2025-05-14 22:19:48,734 | INFO     | all workflow threads have been joined
[2025-05-14 17:19:48] 2025-05-14 22:19:48,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-14 17:19:48] 2025-05-14 22:19:48,734 | INFO     | traces error code: 0
[2025-05-14 17:19:48] 2025-05-14 22:19:48,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-14 17:19:48] 2025-05-14 22:19:48,802 [wrapper] ==== pilot stdout END ====
[2025-05-14 17:19:48] 2025-05-14 22:19:48,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-14 17:19:48] 2025-05-14 22:19:48,805 [wrapper] pilotpid: 13912
[2025-05-14 17:19:48] 2025-05-14 22:19:48,806 [wrapper] Pilot exit status: 0
[2025-05-14 17:19:48] 2025-05-14 22:19:48,812 [wrapper] pandaids: 6649971333
[2025-05-14 17:19:48] 2025-05-14 22:19:48,828 [wrapper] cleanup supervisor_pilot 14940 13913
[2025-05-14 17:19:48] 2025-05-14 22:19:48,829 [wrapper] Test setup, not cleaning
[2025-05-14 17:19:48] 2025-05-14 22:19:48,831 [wrapper] apfmon messages muted
[2025-05-14 17:19:48] 2025-05-14 22:19:48,832 [wrapper] ==== wrapper stdout END ====
[2025-05-14 17:19:48] 2025-05-14 22:19:48,833 [wrapper] ==== wrapper stderr END ====
[2025-05-14 17:19:48]  *** Error codes and diagnostics ***
[2025-05-14 17:19:48]     "exeErrorCode": 0,
[2025-05-14 17:19:48]     "exeErrorDiag": "",
[2025-05-14 17:19:48]     "pilotErrorCode": 0,
[2025-05-14 17:19:48]     "pilotErrorDiag": "",
[2025-05-14 17:19:48]  *** Listing of results directory ***
[2025-05-14 17:19:48] total 406456
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc    495897 May 14 09:40 pilot3.tar.gz
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc      5111 May 14 10:17 queuedata.json
[2025-05-14 17:19:48] -rwx------ 1 boinc boinc     37140 May 14 10:17 runpilot2-wrapper.sh
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc       100 May 14 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-14 17:19:48] -rwxr-xr-x 1 boinc boinc      7986 May 14 16:35 run_atlas
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc       105 May 14 16:35 job.xml
[2025-05-14 17:19:48] -rw-r--r-- 2 boinc boinc     17569 May 14 16:35 start_atlas.sh
[2025-05-14 17:19:48] drwxrwx--x 1 boinc boinc        76 May 14 16:35 shared
[2025-05-14 17:19:48] -rw-r--r-- 2 boinc boinc    508881 May 14 16:35 input.tar.gz
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc     10043 May 14 16:35 init_data.xml
[2025-05-14 17:19:48] -rw-r--r-- 2 boinc boinc 220907388 May 14 16:35 EVNT.44638096._000567.pool.root.1
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc         0 May 14 16:35 boinc_lockfile
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc      2537 May 14 16:35 pandaJob.out
[2025-05-14 17:19:48] -rw------- 1 boinc boinc       473 May 14 16:35 setup.sh.local
[2025-05-14 17:19:48] -rw------- 1 boinc boinc    993874 May 14 16:35 agis_schedconf.cvmfs.json
[2025-05-14 17:19:48] -rw------- 1 boinc boinc   1596741 May 14 16:35 agis_ddmendpoints.agis.ALL.json
[2025-05-14 17:19:48] drwx------ 1 boinc boinc       368 May 14 16:35 pilot3
[2025-05-14 17:19:48] -rw------- 1 boinc boinc        95 May 14 17:19 pilot_heartbeat.json
[2025-05-14 17:19:48] -rw------- 1 boinc boinc 190225890 May 14 17:19 HITS.44638099._007932.pool.root.1
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc       529 May 14 17:19 boinc_task_state.xml
[2025-05-14 17:19:48] -rw------- 1 boinc boinc      1028 May 14 17:19 memory_monitor_summary.json
[2025-05-14 17:19:48] -rw------- 1 boinc boinc    338094 May 14 17:19 log.44638099._007932.job.log.tgz.1
[2025-05-14 17:19:48] -rw------- 1 boinc boinc      7686 May 14 17:19 heartbeat.json
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc        27 May 14 17:19 wrapper_checkpoint.txt
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc      8192 May 14 17:19 boinc_mmap_file
[2025-05-14 17:19:48] -rw------- 1 boinc boinc      4355 May 14 17:19 pilotlog.txt
[2025-05-14 17:19:48] -rw------- 1 boinc boinc    285946 May 14 17:19 log.44638099._007932.job.log.1
[2025-05-14 17:19:48] -rw------- 1 boinc boinc       357 May 14 17:19 output.list
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc       620 May 14 17:19 runtime_log
[2025-05-14 17:19:48] -rw------- 1 boinc boinc    645120 May 14 17:19 result.tar.gz
[2025-05-14 17:19:48] -rw------- 1 boinc boinc       652 May 14 17:19 wlxNDmV2SZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkPGKDmp4JqCo.diag
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc     11478 May 14 17:19 runtime_log.err
[2025-05-14 17:19:48] -rw-r--r-- 1 boinc boinc     20874 May 14 17:19 stderr.txt
[2025-05-14 17:19:48] HITS file was successfully produced:
[2025-05-14 17:19:48] -rw------- 1 boinc boinc 190225890 May 14 17:19 shared/HITS.pool.root.1
[2025-05-14 17:19:48]  *** Contents of shared directory: ***
[2025-05-14 17:19:48] total 402652
[2025-05-14 17:19:48] -rw-r--r-- 2 boinc boinc     17569 May 14 16:35 start_atlas.sh
[2025-05-14 17:19:48] -rw-r--r-- 2 boinc boinc    508881 May 14 16:35 input.tar.gz
[2025-05-14 17:19:48] -rw-r--r-- 2 boinc boinc 220907388 May 14 16:35 ATLAS.root_0
[2025-05-14 17:19:48] -rw------- 1 boinc boinc 190225890 May 14 17:19 HITS.pool.root.1
[2025-05-14 17:19:48] -rw------- 1 boinc boinc    645120 May 14 17:19 result.tar.gz
17:19:50 (10090): run_atlas exited; CPU time 25182.762044
17:19:50 (10090): called boinc_finish(0)

</stderr_txt>
]]>

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