Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:49:13 (12411): wrapper (7.7.26015): starting
20:49:13 (12411): wrapper: running run_atlas (--nthreads 12)
[2025-05-13 20:49:13] Arguments: --nthreads 12
[2025-05-13 20:49:13] Threads: 12
[2025-05-13 20:49:13] Checking for CVMFS
[2025-05-13 20:49:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-13 20:49:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-13 20:49:17] Running cvmfs_config stat atlas.cern.ch
[2025-05-13 20:49:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-13 20:49:20] 2.11.2.0 4264 4743 77184 145965 0 24 12886931 18432000 3533 130560 0 1186901 99.187 3696716 52921 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-13 20:49:20] CVMFS is ok
[2025-05-13 20:49:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-13 20:49:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-13 20:49:20] Further information can be found at the LHC@home message board.
[2025-05-13 20:49:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-13 20:49:20] Checking for apptainer binary...
[2025-05-13 20:49:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-13 20:49:20] Running /usr/bin/apptainer --version
[2025-05-13 20:49:23] apptainer version 1.3.2-1.el7
[2025-05-13 20:49:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-13 20:50:00] c-206-10.aglt2.org
[2025-05-13 20:50:00] apptainer works
[2025-05-13 20:50:00] Set ATHENA_PROC_NUMBER=12
[2025-05-13 20:50:00] Set ATHENA_CORE_NUMBER=12
[2025-05-13 20:50:00] Starting ATLAS job with PandaID=6635393623
[2025-05-13 20:50:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:46:17 (11851): wrapper (7.7.26015): starting
11:46:17 (11851): wrapper: running run_atlas (--nthreads 12)
[2025-05-14 11:46:17] Arguments: --nthreads 12
[2025-05-14 11:46:17] Threads: 12
[2025-05-14 11:46:17] This job has been restarted, cleaning up previous attempt
[2025-05-14 11:46:17] Checking for CVMFS
[2025-05-14 11:46:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-14 11:46:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-14 11:46:17] Running cvmfs_config stat atlas.cern.ch
[2025-05-14 11:46:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-14 11:46:17] 2.11.2.0 4264 5640 80792 145988 0 60 14039364 18432000 2749 130560 0 1565575 99.154 4032460 50366 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-14 11:46:17] CVMFS is ok
[2025-05-14 11:46:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-14 11:46:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-14 11:46:17] Further information can be found at the LHC@home message board.
[2025-05-14 11:46:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-14 11:46:17] Checking for apptainer binary...
[2025-05-14 11:46:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-14 11:46:17] Running /usr/bin/apptainer --version
[2025-05-14 11:46:18] apptainer version 1.3.2-1.el7
[2025-05-14 11:46:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-14 11:46:19] c-206-10.aglt2.org
[2025-05-14 11:46:19] apptainer works
[2025-05-14 11:46:19] Set ATHENA_PROC_NUMBER=12
[2025-05-14 11:46:19] Set ATHENA_CORE_NUMBER=12
[2025-05-14 11:46:19] Starting ATLAS job with PandaID=6635393623
[2025-05-14 11:46:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-15 04:43:13]  *** The last 200 lines of the pilot log: ***
[2025-05-15 04:43:13] 2025-05-15 08:42:52,226 | INFO     | mean y: 2656687.664321608
[2025-05-15 04:43:13] 2025-05-15 08:42:52,227 | INFO     | -- intersect: -3876697078.2673345
[2025-05-15 04:43:13] 2025-05-15 08:42:52,227 | INFO     | intersect: -3876697078.2673345
[2025-05-15 04:43:13] 2025-05-15 08:42:52,228 | INFO     | chi2: 4.848987937903557
[2025-05-15 04:43:13] 2025-05-15 08:42:52,229 | INFO     | current chi2=4.848987937903557 (change=25.026367379982766 %)
[2025-05-15 04:43:13] 2025-05-15 08:42:52,230 | INFO     | sum of square deviations: 300882332784.44415
[2025-05-15 04:43:13] 2025-05-15 08:42:52,264 | INFO     | sum of deviations: 673854240043.8889
[2025-05-15 04:43:13] 2025-05-15 08:42:52,264 | INFO     | mean x: 1747267786.5555556
[2025-05-15 04:43:13] 2025-05-15 08:42:52,264 | INFO     | mean y: 2656542.92020202
[2025-05-15 04:43:13] 2025-05-15 08:42:52,264 | INFO     | -- intersect: -3910513750.4850554
[2025-05-15 04:43:13] 2025-05-15 08:42:52,265 | INFO     | intersect: -3910513750.4850554
[2025-05-15 04:43:13] 2025-05-15 08:42:52,266 | INFO     | chi2: 4.849258490982945
[2025-05-15 04:43:13] 2025-05-15 08:42:52,267 | INFO     | current chi2=4.849258490982945 (change=-0.0055795783130991065 %)
[2025-05-15 04:43:13] 2025-05-15 08:42:52,267 | INFO     | right removable region: 989
[2025-05-15 04:43:13] 2025-05-15 08:42:52,268 | INFO     | sum of square deviations: 305462281579.87317
[2025-05-15 04:43:13] 2025-05-15 08:42:52,302 | INFO     | sum of deviations: 250641885289.24072
[2025-05-15 04:43:13] 2025-05-15 08:42:52,303 | INFO     | mean x: 1747268244.0462313
[2025-05-15 04:43:13] 2025-05-15 08:42:52,303 | INFO     | mean y: 2661348.2773869345
[2025-05-15 04:43:13] 2025-05-15 08:42:52,303 | INFO     | -- intersect: -1431029922.9614651
[2025-05-15 04:43:13] 2025-05-15 08:42:52,303 | INFO     | intersect: -1431029922.9614651
[2025-05-15 04:43:13] 2025-05-15 08:42:52,305 | INFO     | chi2: 3.82763512082515
[2025-05-15 04:43:13] 2025-05-15 08:42:52,305 | INFO     | current chi2=3.82763512082515 (change=40.81822577676048 %)
[2025-05-15 04:43:13] 2025-05-15 08:42:52,307 | INFO     | sum of square deviations: 300879909556.33203
[2025-05-15 04:43:13] 2025-05-15 08:42:52,340 | INFO     | sum of deviations: 38121240448.24727
[2025-05-15 04:43:13] 2025-05-15 08:42:52,341 | INFO     | mean x: 1747268396.5565658
[2025-05-15 04:43:13] 2025-05-15 08:42:52,341 | INFO     | mean y: 2668421.3080808083
[2025-05-15 04:43:13] 2025-05-15 08:42:52,341 | INFO     | -- intersect: -218709067.04258507
[2025-05-15 04:43:13] 2025-05-15 08:42:52,341 | INFO     | intersect: -218709067.04258507
[2025-05-15 04:43:13] 2025-05-15 08:42:52,343 | INFO     | chi2: 2.4395991973361393
[2025-05-15 04:43:13] 2025-05-15 08:42:52,343 | INFO     | current chi2=2.4395991973361393 (change=36.26353818150206 %)
[2025-05-15 04:43:13] 2025-05-15 08:42:52,344 | INFO     | sum of square deviations: 296343584907.578
[2025-05-15 04:43:13] 2025-05-15 08:42:52,377 | INFO     | sum of deviations: -96864824755.91779
[2025-05-15 04:43:13] 2025-05-15 08:42:52,377 | INFO     | mean x: 1747268549.0670052
[2025-05-15 04:43:13] 2025-05-15 08:42:52,377 | INFO     | mean y: 2672953.9532994926
[2025-05-15 04:43:13] 2025-05-15 08:42:52,378 | INFO     | -- intersect: 573796711.7349522
[2025-05-15 04:43:13] 2025-05-15 08:42:52,378 | INFO     | intersect: 573796711.7349522
[2025-05-15 04:43:13] 2025-05-15 08:42:52,379 | INFO     | chi2: 1.762083681844409
[2025-05-15 04:43:13] 2025-05-15 08:42:52,379 | INFO     | current chi2=1.762083681844409 (change=27.771591179056248 %)
[2025-05-15 04:43:13] 2025-05-15 08:42:52,381 | INFO     | sum of square deviations: 291853075071.1063
[2025-05-15 04:43:13] 2025-05-15 08:42:52,413 | INFO     | sum of deviations: -123268605532.12439
[2025-05-15 04:43:13] 2025-05-15 08:42:52,413 | INFO     | mean x: 1747268701.5775511
[2025-05-15 04:43:13] 2025-05-15 08:42:52,413 | INFO     | mean y: 2673849.1397959185
[2025-05-15 04:43:13] 2025-05-15 08:42:52,413 | INFO     | -- intersect: 740659482.0851225
[2025-05-15 04:43:13] 2025-05-15 08:42:52,414 | INFO     | intersect: 740659482.0851225
[2025-05-15 04:43:13] 2025-05-15 08:42:52,415 | INFO     | chi2: 1.7244208974585624
[2025-05-15 04:43:13] 2025-05-15 08:42:52,415 | INFO     | current chi2=1.7244208974585624 (change=2.137400440961134 %)
[2025-05-15 04:43:13] 2025-05-15 08:42:52,415 | INFO     | left removable region: 40
[2025-05-15 04:43:13] 2025-05-15 08:42:52,417 | INFO     | sum of square deviations: 265023045694.5091
[2025-05-15 04:43:13] 2025-05-15 08:42:52,447 | INFO     | sum of deviations: 79215708795.0527
[2025-05-15 04:43:13] 2025-05-15 08:42:52,447 | INFO     | mean x: 1747268976.1433086
[2025-05-15 04:43:13] 2025-05-15 08:42:52,447 | INFO     | mean y: 2676602.543730242
[2025-05-15 04:43:13] 2025-05-15 08:42:52,447 | INFO     | -- intersect: -519584207.03259677
[2025-05-15 04:43:13] 2025-05-15 08:42:52,447 | INFO     | intersect: -519584207.03259677
[2025-05-15 04:43:13] 2025-05-15 08:42:52,449 | INFO     | chi2: 0.0015282290122565186
[2025-05-15 04:43:13] 2025-05-15 08:42:52,449 | INFO     | -- intersect: -519584207.03259677
[2025-05-15 04:43:13] 2025-05-15 08:42:52,449 | INFO     | current memory leak: 0.30 B/s (using 949 data points, chi2=0.00)
[2025-05-15 04:43:13] 2025-05-15 08:42:52,451 | INFO     | ..............................
[2025-05-15 04:43:13] 2025-05-15 08:42:52,451 | INFO     | . Timing measurements:
[2025-05-15 04:43:13] 2025-05-15 08:42:52,451 | INFO     | . get job = 0 s
[2025-05-15 04:43:13] 2025-05-15 08:42:52,451 | INFO     | . initial setup = 2 s
[2025-05-15 04:43:13] 2025-05-15 08:42:52,451 | INFO     | . payload setup = 6 s
[2025-05-15 04:43:13] 2025-05-15 08:42:52,451 | INFO     | . stage-in = 0 s
[2025-05-15 04:43:13] 2025-05-15 08:42:52,452 | INFO     | . payload execution = 60949 s
[2025-05-15 04:43:13] 2025-05-15 08:42:52,452 | INFO     | . stage-out = 2 s
[2025-05-15 04:43:13] 2025-05-15 08:42:52,452 | INFO     | . log creation = 0 s
[2025-05-15 04:43:13] 2025-05-15 08:42:52,452 | INFO     | ..............................
[2025-05-15 04:43:13] 2025-05-15 08:42:52,609 | INFO     | 
[2025-05-15 04:43:13] 2025-05-15 08:42:52,609 | INFO     | job summary report
[2025-05-15 04:43:13] 2025-05-15 08:42:52,609 | INFO     | --------------------------------------------------
[2025-05-15 04:43:13] 2025-05-15 08:42:52,610 | INFO     | PanDA job id: 6635393623
[2025-05-15 04:43:13] 2025-05-15 08:42:52,610 | INFO     | task id: 44506063
[2025-05-15 04:43:13] 2025-05-15 08:42:52,610 | INFO     | errors: (none)
[2025-05-15 04:43:13] 2025-05-15 08:42:52,610 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-15 04:43:13] 2025-05-15 08:42:52,610 | INFO     | pilot state: finished 
[2025-05-15 04:43:13] 2025-05-15 08:42:52,610 | INFO     | transexitcode: 0
[2025-05-15 04:43:13] 2025-05-15 08:42:52,611 | INFO     | exeerrorcode: 0
[2025-05-15 04:43:13] 2025-05-15 08:42:52,611 | INFO     | exeerrordiag: 
[2025-05-15 04:43:13] 2025-05-15 08:42:52,611 | INFO     | exitcode: 0
[2025-05-15 04:43:13] 2025-05-15 08:42:52,611 | INFO     | exitmsg: OK
[2025-05-15 04:43:13] 2025-05-15 08:42:52,611 | INFO     | cpuconsumptiontime: 105097 s
[2025-05-15 04:43:13] 2025-05-15 08:42:52,611 | INFO     | nevents: 400
[2025-05-15 04:43:13] 2025-05-15 08:42:52,612 | INFO     | neventsw: 0
[2025-05-15 04:43:13] 2025-05-15 08:42:52,612 | INFO     | pid: 24836
[2025-05-15 04:43:13] 2025-05-15 08:42:52,612 | INFO     | pgrp: 24836
[2025-05-15 04:43:13] 2025-05-15 08:42:52,612 | INFO     | corecount: 12
[2025-05-15 04:43:13] 2025-05-15 08:42:52,612 | INFO     | event service: False
[2025-05-15 04:43:13] 2025-05-15 08:42:52,612 | INFO     | sizes: {0: 2393568, 1: 2393767, 4: 2393973, 12: 2394001, 60957: 2443203, 60960: 2452144, 60961: 2452328, 60967: 2452498}
[2025-05-15 04:43:13] 2025-05-15 08:42:52,613 | INFO     | --------------------------------------------------
[2025-05-15 04:43:13] 2025-05-15 08:42:52,613 | INFO     | 
[2025-05-15 04:43:13] 2025-05-15 08:42:52,613 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-15 04:43:13] 2025-05-15 08:42:52,637 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,641 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-15 04:43:13] 2025-05-15 08:42:52,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-15 04:43:13] 2025-05-15 08:42:52,645 | INFO     | job 6635393623 has completed (purged errors)
[2025-05-15 04:43:13] 2025-05-15 08:42:52,646 | INFO     | overall cleanup function is called
[2025-05-15 04:43:13] 2025-05-15 08:42:53,654 | INFO     | --- collectZombieJob: --- 10, [24836]
[2025-05-15 04:43:13] 2025-05-15 08:42:53,654 | INFO     | zombie collector waiting for pid 24836
[2025-05-15 04:43:13] 2025-05-15 08:42:53,654 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-15 04:43:13] 2025-05-15 08:42:53,655 | INFO     | collected zombie processes
[2025-05-15 04:43:13] 2025-05-15 08:42:53,655 | INFO     | will attempt to kill all subprocesses of pid=24836
[2025-05-15 04:43:13] 2025-05-15 08:42:53,822 | INFO     | process IDs to be killed: [24836] (in reverse order)
[2025-05-15 04:43:13] 2025-05-15 08:42:53,881 | WARNING  | found no corresponding commands to process id(s)
[2025-05-15 04:43:13] 2025-05-15 08:42:53,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-15 04:43:13] 2025-05-15 08:42:53,888 | INFO     | did not find any defunct processes belonging to 24836
[2025-05-15 04:43:13] 2025-05-15 08:42:53,893 | INFO     | did not find any defunct processes belonging to 24836
[2025-05-15 04:43:13] 2025-05-15 08:42:53,894 | INFO     | ready for new job
[2025-05-15 04:43:13] 2025-05-15 08:42:53,894 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-15 04:43:13] 2025-05-15 08:42:53,897 | INFO     | **************************************
[2025-05-15 04:43:13] 2025-05-15 08:42:53,897 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-15 04:43:13] 2025-05-15 08:42:53,897 | INFO     | **************************************
[2025-05-15 04:43:13] 2025-05-15 08:42:53,897 | INFO     | 
[2025-05-15 04:43:13] 2025-05-15 08:42:53,899 | INFO     | architecture information:
[2025-05-15 04:43:13] 2025-05-15 08:42:53,899 | INFO     | executing command: cat /etc/os-release
[2025-05-15 04:43:13] 2025-05-15 08:42:53,914 | INFO     | cat /etc/os-release:
[2025-05-15 04:43:13] NAME="CentOS Linux"
[2025-05-15 04:43:13] VERSION="7 (Core)"
[2025-05-15 04:43:13] ID="centos"
[2025-05-15 04:43:13] ID_LIKE="rhel fedora"
[2025-05-15 04:43:13] VERSION_ID="7"
[2025-05-15 04:43:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-15 04:43:13] ANSI_COLOR="0;31"
[2025-05-15 04:43:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-15 04:43:13] HOME_URL="https://www.centos.org/"
[2025-05-15 04:43:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-15 04:43:13] 
[2025-05-15 04:43:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-15 04:43:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-15 04:43:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-15 04:43:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-15 04:43:13] 
[2025-05-15 04:43:13] 2025-05-15 08:42:53,914 | INFO     | **************************************
[2025-05-15 04:43:13] 2025-05-15 08:42:54,417 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-15 04:43:13] 2025-05-15 08:42:54,432 | INFO     | sufficient remaining disk space (29189210112 B)
[2025-05-15 04:43:13] 2025-05-15 08:42:54,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-15 04:43:13] 2025-05-15 08:42:54,433 | INFO     | current server update state: UPDATING_FINAL
[2025-05-15 04:43:13] 2025-05-15 08:42:54,433 | INFO     | update_server=False
[2025-05-15 04:43:13] 2025-05-15 08:42:54,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-15 04:43:13] 2025-05-15 08:42:54,433 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-15 04:43:13] 2025-05-15 08:42:54,433 | INFO     | found 0 job(s) in 20 queues
[2025-05-15 04:43:13] 2025-05-15 08:42:54,434 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-15 04:43:13] 2025-05-15 08:42:54,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-15 04:43:13] 2025-05-15 08:42:54,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-15 04:43:13] 2025-05-15 08:42:54,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-15 04:43:13] 2025-05-15 08:42:54,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-15 04:43:13] 2025-05-15 08:42:54,746 | INFO     | aborting loop
[2025-05-15 04:43:13] 2025-05-15 08:42:54,919 | INFO     | all job control threads have been joined
[2025-05-15 04:43:13] 2025-05-15 08:42:54,987 | INFO     | all payload control threads have been joined
[2025-05-15 04:43:13] 2025-05-15 08:42:55,010 | INFO     | all data control threads have been joined
[2025-05-15 04:43:13] 2025-05-15 08:42:55,438 | INFO     | [job] retrieve thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:55,440 | INFO     | [job] queue monitor thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:55,491 | INFO     | [payload] validate_post thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:55,751 | INFO     | [job] job monitor thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:55,788 | INFO     | [job] create_data_payload thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:55,833 | INFO     | [payload] execute_payloads thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:55,912 | INFO     | [job] validate thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:55,925 | INFO     | [job] control thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:55,993 | INFO     | [payload] control thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:56,015 | INFO     | [data] control thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:56,285 | INFO     | [payload] validate_pre thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:56,391 | INFO     | [data] copytool_in thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:56,442 | INFO     | [data] copytool_out thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:56,472 | INFO     | [payload] failed_post thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:42:57,165 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-15 04:43:13] 2025-05-15 08:43:01,171 | INFO     | [data] queue_monitor thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:43:05,076 | INFO     | job.realtimelogging is not enabled
[2025-05-15 04:43:13] 2025-05-15 08:43:06,081 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-15 04:43:13] 2025-05-15 08:43:06,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140580208867136)>', '<ExcThread(monitor, started 140579765737216)>']
[2025-05-15 04:43:13] 2025-05-15 08:43:07,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-15 04:43:13] 2025-05-15 08:43:07,496 | INFO     | [monitor] control thread has ended
[2025-05-15 04:43:13] 2025-05-15 08:43:11,654 | INFO     | all workflow threads have been joined
[2025-05-15 04:43:13] 2025-05-15 08:43:11,655 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-15 04:43:13] 2025-05-15 08:43:11,663 | INFO     | traces error code: 0
[2025-05-15 04:43:13] 2025-05-15 08:43:11,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-15 04:43:13] 2025-05-15 08:43:12,057 [wrapper] ==== pilot stdout END ====
[2025-05-15 04:43:13] 2025-05-15 08:43:12,081 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-15 04:43:13] 2025-05-15 08:43:12,086 [wrapper] pilotpid: 15667
[2025-05-15 04:43:13] 2025-05-15 08:43:12,089 [wrapper] Pilot exit status: 0
[2025-05-15 04:43:13] 2025-05-15 08:43:12,142 [wrapper] pandaids: 6635393623 6635393623
[2025-05-15 04:43:13] 2025-05-15 08:43:12,185 [wrapper] cleanup supervisor_pilot 27735 15668
[2025-05-15 04:43:13] 2025-05-15 08:43:12,190 [wrapper] Test setup, not cleaning
[2025-05-15 04:43:13] 2025-05-15 08:43:12,194 [wrapper] apfmon messages muted
[2025-05-15 04:43:13] 2025-05-15 08:43:12,196 [wrapper] ==== wrapper stdout END ====
[2025-05-15 04:43:13] 2025-05-15 08:43:12,199 [wrapper] ==== wrapper stderr END ====
[2025-05-15 04:43:13]  *** Error codes and diagnostics ***
[2025-05-15 04:43:13]     "exeErrorCode": 0,
[2025-05-15 04:43:13]     "exeErrorDiag": "",
[2025-05-15 04:43:13]     "pilotErrorCode": 0,
[2025-05-15 04:43:13]     "pilotErrorDiag": "",
[2025-05-15 04:43:13]  *** Listing of results directory ***
[2025-05-15 04:43:13] total 656404
[2025-05-15 04:43:13] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas    495897 May  6 17:53 pilot3.tar.gz
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas      5111 May  6 17:56 queuedata.json
[2025-05-15 04:43:13] -rwx------ 1 boincer umatlas     37140 May  6 17:58 runpilot2-wrapper.sh
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas       100 May 13 20:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-15 04:43:13] -rwxr-xr-x 1 boincer umatlas      7986 May 13 20:49 run_atlas
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas       105 May 13 20:49 job.xml
[2025-05-15 04:43:13] -rw-r--r-- 3 boincer umatlas 225683494 May 13 20:49 EVNT.44506061._001159.pool.root.1
[2025-05-15 04:43:13] -rw-r--r-- 3 boincer umatlas 225683494 May 13 20:49 ATLAS.root_0
[2025-05-15 04:43:13] -rw-r--r-- 2 boincer umatlas     17569 May 13 20:49 start_atlas.sh
[2025-05-15 04:43:13] drwxrwx--x 2 boincer umatlas      4096 May 13 20:49 shared
[2025-05-15 04:43:13] -rw-r--r-- 2 boincer umatlas    508879 May 13 20:49 input.tar.gz
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas         0 May 13 20:49 boinc_lockfile
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas      2558 May 14 11:46 pandaJob.out
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas       424 May 14 11:46 setup.sh.local
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas    993492 May 14 11:46 agis_schedconf.cvmfs.json
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas      5867 May 14 14:45 init_data.xml
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas 206615951 May 15 04:40 HITS.44506063._029134.pool.root.1
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas       533 May 15 04:41 boinc_task_state.xml
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas        96 May 15 04:42 pilot_heartbeat.json
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas      1082 May 15 04:42 memory_monitor_summary.json
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas   1596741 May 15 04:42 agis_ddmendpoints.agis.ALL.json
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas    819311 May 15 04:42 log.44506063._029134.job.log.tgz.1
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas      7784 May 15 04:42 heartbeat.json
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas      8192 May 15 04:43 boinc_mmap_file
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas        30 May 15 04:43 wrapper_checkpoint.txt
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas      4548 May 15 04:43 pilotlog.txt
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas   4338895 May 15 04:43 log.44506063._029134.job.log.1
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas       357 May 15 04:43 output.list
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas       620 May 15 04:43 runtime_log
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas   5181440 May 15 04:43 result.tar.gz
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas     11101 May 15 04:43 runtime_log.err
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas       791 May 15 04:43 A3WMDmoTfW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm184LDmISUnAn.diag
[2025-05-15 04:43:13] -rw-r--r-- 1 boincer umatlas     23014 May 15 04:43 stderr.txt
[2025-05-15 04:43:13] HITS file was successfully produced:
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas 206615951 May 15 04:40 shared/HITS.pool.root.1
[2025-05-15 04:43:13]  *** Contents of shared directory: ***
[2025-05-15 04:43:13] total 427760
[2025-05-15 04:43:13] -rw-r--r-- 3 boincer umatlas 225683494 May 13 20:49 ATLAS.root_0
[2025-05-15 04:43:13] -rw-r--r-- 2 boincer umatlas     17569 May 13 20:49 start_atlas.sh
[2025-05-15 04:43:13] -rw-r--r-- 2 boincer umatlas    508879 May 13 20:49 input.tar.gz
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas 206615951 May 15 04:40 HITS.pool.root.1
[2025-05-15 04:43:13] -rw------- 1 boincer umatlas   5181440 May 15 04:43 result.tar.gz
04:43:14 (11851): run_atlas exited; CPU time 106017.823618
04:43:14 (11851): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN