Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:04:37 (19408): wrapper (7.7.26015): starting
08:04:37 (19408): wrapper: running run_atlas (--nthreads 8)
[2025-05-12 08:04:37] Arguments: --nthreads 8
[2025-05-12 08:04:37] Threads: 8
[2025-05-12 08:04:37] Checking for CVMFS
[2025-05-12 08:04:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-12 08:04:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-12 08:04:37] Running cvmfs_config stat atlas.cern.ch
[2025-05-12 08:04:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-12 08:04:37] 2.11.2.0 2811 2551 34312 145905 3 1 18956430 20275200 1 130560 0 10793 99.456 70810 40812 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-12 08:04:37] CVMFS is ok
[2025-05-12 08:04:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-12 08:04:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-12 08:04:37] Further information can be found at the LHC@home message board.
[2025-05-12 08:04:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-12 08:04:37] Checking for apptainer binary...
[2025-05-12 08:04:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-12 08:04:37] Running /usr/bin/apptainer --version
[2025-05-12 08:04:37] apptainer version 1.3.2-1.el7
[2025-05-12 08:04:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-12 08:04:39] c-204-27.aglt2.org
[2025-05-12 08:04:39] apptainer works
[2025-05-12 08:04:39] Set ATHENA_PROC_NUMBER=8
[2025-05-12 08:04:39] Set ATHENA_CORE_NUMBER=8
[2025-05-12 08:04:39] Starting ATLAS job with PandaID=6634148582
[2025-05-12 08:04:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:28:47 (31058): wrapper (7.7.26015): starting
11:28:47 (31058): wrapper: running run_atlas (--nthreads 8)
[2025-05-12 11:28:47] Arguments: --nthreads 8
[2025-05-12 11:28:47] Threads: 8
[2025-05-12 11:28:47] This job has been restarted, cleaning up previous attempt
[2025-05-12 11:28:47] Checking for CVMFS
[2025-05-12 11:28:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-12 11:28:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-12 11:28:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-12 11:28:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-12 11:28:47] 2.11.2.0 2811 2755 51124 145912 0 8 19365879 20275201 1 130560 0 112444 99.927 214156 44274 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-12 11:28:47] CVMFS is ok
[2025-05-12 11:28:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-12 11:28:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-12 11:28:47] Further information can be found at the LHC@home message board.
[2025-05-12 11:28:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-12 11:28:47] Checking for apptainer binary...
[2025-05-12 11:28:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-12 11:28:47] Running /usr/bin/apptainer --version
[2025-05-12 11:28:48] apptainer version 1.3.2-1.el7
[2025-05-12 11:28:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-12 11:28:50] c-204-27.aglt2.org
[2025-05-12 11:28:50] apptainer works
[2025-05-12 11:28:50] Set ATHENA_PROC_NUMBER=8
[2025-05-12 11:28:50] Set ATHENA_CORE_NUMBER=8
[2025-05-12 11:28:50] Starting ATLAS job with PandaID=6634148582
[2025-05-12 11:28:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-12 13:48:52]  *** The last 200 lines of the pilot log: ***
[2025-05-12 13:48:52] 2025-05-12 17:48:38,678 | INFO     | extracted standard info from prmon json
[2025-05-12 13:48:52] 2025-05-12 17:48:38,678 | INFO     | extracted standard memory fields from prmon json
[2025-05-12 13:48:52] 2025-05-12 17:48:38,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-12 13:48:52] 2025-05-12 17:48:38,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-12 13:48:52] 2025-05-12 17:48:38,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-12 13:48:52] 2025-05-12 17:48:38,683 | INFO     | fitting pss+swap vs Time
[2025-05-12 13:48:52] 2025-05-12 17:48:38,684 | INFO     | sum of square deviations: 797292692.9927018
[2025-05-12 13:48:52] 2025-05-12 17:48:38,685 | INFO     | sum of deviations: 21366717111.50362
[2025-05-12 13:48:52] 2025-05-12 17:48:38,685 | INFO     | mean x: 1747067931.0072992
[2025-05-12 13:48:52] 2025-05-12 17:48:38,685 | INFO     | mean y: 2470181.4963503648
[2025-05-12 13:48:52] 2025-05-12 17:48:38,685 | INFO     | -- intersect: -46817357197.44915
[2025-05-12 13:48:52] 2025-05-12 17:48:38,685 | INFO     | intersect: -46817357197.44915
[2025-05-12 13:48:52] 2025-05-12 17:48:38,686 | INFO     | chi2: 4.135122576679566
[2025-05-12 13:48:52] 2025-05-12 17:48:38,686 | INFO     | sum of square deviations: 713142582.9924244
[2025-05-12 13:48:52] 2025-05-12 17:48:38,687 | INFO     | sum of deviations: 29916293481.265167
[2025-05-12 13:48:52] 2025-05-12 17:48:38,687 | INFO     | mean x: 1747067778.5075758
[2025-05-12 13:48:52] 2025-05-12 17:48:38,687 | INFO     | mean y: 2485177.234848485
[2025-05-12 13:48:52] 2025-05-12 17:48:38,688 | INFO     | -- intersect: -73286915343.74039
[2025-05-12 13:48:52] 2025-05-12 17:48:38,688 | INFO     | intersect: -73286915343.74039
[2025-05-12 13:48:52] 2025-05-12 17:48:38,688 | INFO     | chi2: 3.367123880045643
[2025-05-12 13:48:52] 2025-05-12 17:48:38,688 | INFO     | current chi2=3.367123880045643 (change=18.57257390542975 %)
[2025-05-12 13:48:52] 2025-05-12 17:48:38,688 | INFO     | right removable region: 131
[2025-05-12 13:48:52] 2025-05-12 17:48:38,689 | INFO     | sum of square deviations: 713141972.9924244
[2025-05-12 13:48:52] 2025-05-12 17:48:38,690 | INFO     | sum of deviations: -12200284974.984848
[2025-05-12 13:48:52] 2025-05-12 17:48:38,690 | INFO     | mean x: 1747068083.5075758
[2025-05-12 13:48:52] 2025-05-12 17:48:38,690 | INFO     | mean y: 2530737.984848485
[2025-05-12 13:48:52] 2025-05-12 17:48:38,690 | INFO     | -- intersect: 29891009185.066063
[2025-05-12 13:48:52] 2025-05-12 17:48:38,690 | INFO     | intersect: 29891009185.066063
[2025-05-12 13:48:52] 2025-05-12 17:48:38,691 | INFO     | chi2: 1.5958363868095817
[2025-05-12 13:48:52] 2025-05-12 17:48:38,691 | INFO     | current chi2=1.5958363868095817 (change=61.40776102238276 %)
[2025-05-12 13:48:52] 2025-05-12 17:48:38,691 | INFO     | sum of square deviations: 635130902.9921248
[2025-05-12 13:48:52] 2025-05-12 17:48:38,692 | INFO     | sum of deviations: -26333377896.125984
[2025-05-12 13:48:52] 2025-05-12 17:48:38,692 | INFO     | mean x: 1747068236.007874
[2025-05-12 13:48:52] 2025-05-12 17:48:38,692 | INFO     | mean y: 2557998.125984252
[2025-05-12 13:48:52] 2025-05-12 17:48:38,692 | INFO     | -- intersect: 72438346986.4694
[2025-05-12 13:48:52] 2025-05-12 17:48:38,693 | INFO     | intersect: 72438346986.4694
[2025-05-12 13:48:52] 2025-05-12 17:48:38,693 | INFO     | chi2: 0.9652989268700438
[2025-05-12 13:48:52] 2025-05-12 17:48:38,693 | INFO     | current chi2=0.9652989268700438 (change=39.51141013898782 %)
[2025-05-12 13:48:52] 2025-05-12 17:48:38,693 | INFO     | sum of square deviations: 563026920.4918019
[2025-05-12 13:48:52] 2025-05-12 17:48:38,694 | INFO     | sum of deviations: -26426270854.032784
[2025-05-12 13:48:52] 2025-05-12 17:48:38,694 | INFO     | mean x: 1747068388.5081968
[2025-05-12 13:48:52] 2025-05-12 17:48:38,694 | INFO     | mean y: 2558082.0327868853
[2025-05-12 13:48:52] 2025-05-12 17:48:38,694 | INFO     | -- intersect: 82003081955.5772
[2025-05-12 13:48:52] 2025-05-12 17:48:38,695 | INFO     | intersect: 82003081955.5772
[2025-05-12 13:48:52] 2025-05-12 17:48:38,695 | INFO     | chi2: 0.9405112695703938
[2025-05-12 13:48:52] 2025-05-12 17:48:38,695 | INFO     | current chi2=0.9405112695703938 (change=2.5678737031256595 %)
[2025-05-12 13:48:52] 2025-05-12 17:48:38,695 | INFO     | left removable region: 30
[2025-05-12 13:48:52] 2025-05-12 17:48:38,695 | INFO     | sum of square deviations: 319447850.9900984
[2025-05-12 13:48:52] 2025-05-12 17:48:38,696 | INFO     | sum of deviations: -6233238884.435645
[2025-05-12 13:48:52] 2025-05-12 17:48:38,696 | INFO     | mean x: 1747068663.009901
[2025-05-12 13:48:52] 2025-05-12 17:48:38,696 | INFO     | mean y: 2548994.4356435644
[2025-05-12 13:48:52] 2025-05-12 17:48:38,696 | INFO     | -- intersect: 34092295694.249416
[2025-05-12 13:48:52] 2025-05-12 17:48:38,697 | INFO     | intersect: 34092295694.249416
[2025-05-12 13:48:52] 2025-05-12 17:48:38,697 | INFO     | chi2: 0.072401967631152
[2025-05-12 13:48:52] 2025-05-12 17:48:38,697 | INFO     | -- intersect: 34092295694.249416
[2025-05-12 13:48:52] 2025-05-12 17:48:38,697 | INFO     | current memory leak: -19.51 B/s (using 101 data points, chi2=0.07)
[2025-05-12 13:48:52] 2025-05-12 17:48:38,698 | INFO     | ..............................
[2025-05-12 13:48:52] 2025-05-12 17:48:38,698 | INFO     | . Timing measurements:
[2025-05-12 13:48:52] 2025-05-12 17:48:38,698 | INFO     | . get job = 0 s
[2025-05-12 13:48:52] 2025-05-12 17:48:38,698 | INFO     | . initial setup = 3 s
[2025-05-12 13:48:52] 2025-05-12 17:48:38,698 | INFO     | . payload setup = 10 s
[2025-05-12 13:48:52] 2025-05-12 17:48:38,698 | INFO     | . stage-in = 0 s
[2025-05-12 13:48:52] 2025-05-12 17:48:38,698 | INFO     | . payload execution = 8326 s
[2025-05-12 13:48:52] 2025-05-12 17:48:38,699 | INFO     | . stage-out = 0 s
[2025-05-12 13:48:52] 2025-05-12 17:48:38,699 | INFO     | . log creation = 0 s
[2025-05-12 13:48:52] 2025-05-12 17:48:38,699 | INFO     | ..............................
[2025-05-12 13:48:52] 2025-05-12 17:48:38,803 | INFO     | 
[2025-05-12 13:48:52] 2025-05-12 17:48:38,803 | INFO     | job summary report
[2025-05-12 13:48:52] 2025-05-12 17:48:38,803 | INFO     | --------------------------------------------------
[2025-05-12 13:48:52] 2025-05-12 17:48:38,804 | INFO     | PanDA job id: 6634148582
[2025-05-12 13:48:52] 2025-05-12 17:48:38,804 | INFO     | task id: 44506063
[2025-05-12 13:48:52] 2025-05-12 17:48:38,804 | INFO     | errors: (none)
[2025-05-12 13:48:52] 2025-05-12 17:48:38,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-12 13:48:52] 2025-05-12 17:48:38,804 | INFO     | pilot state: finished 
[2025-05-12 13:48:52] 2025-05-12 17:48:38,804 | INFO     | transexitcode: 0
[2025-05-12 13:48:52] 2025-05-12 17:48:38,805 | INFO     | exeerrorcode: 0
[2025-05-12 13:48:52] 2025-05-12 17:48:38,805 | INFO     | exeerrordiag: 
[2025-05-12 13:48:52] 2025-05-12 17:48:38,805 | INFO     | exitcode: 0
[2025-05-12 13:48:52] 2025-05-12 17:48:38,805 | INFO     | exitmsg: OK
[2025-05-12 13:48:52] 2025-05-12 17:48:38,805 | INFO     | cpuconsumptiontime: 58282 s
[2025-05-12 13:48:52] 2025-05-12 17:48:38,805 | INFO     | nevents: 400
[2025-05-12 13:48:52] 2025-05-12 17:48:38,806 | INFO     | neventsw: 0
[2025-05-12 13:48:52] 2025-05-12 17:48:38,806 | INFO     | pid: 9706
[2025-05-12 13:48:52] 2025-05-12 17:48:38,806 | INFO     | pgrp: 9706
[2025-05-12 13:48:52] 2025-05-12 17:48:38,806 | INFO     | corecount: 8
[2025-05-12 13:48:52] 2025-05-12 17:48:38,806 | INFO     | event service: False
[2025-05-12 13:48:52] 2025-05-12 17:48:38,806 | INFO     | sizes: {0: 2393733, 1: 2393733, 7: 2393967, 11: 2393995, 8341: 2421643, 8342: 2430584, 8345: 2430768, 8353: 2430938}
[2025-05-12 13:48:52] 2025-05-12 17:48:38,807 | INFO     | --------------------------------------------------
[2025-05-12 13:48:52] 2025-05-12 17:48:38,807 | INFO     | 
[2025-05-12 13:48:52] 2025-05-12 17:48:38,807 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-12 13:48:52] 2025-05-12 17:48:38,836 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,837 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,837 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,837 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,840 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,840 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-12 13:48:52] 2025-05-12 17:48:38,840 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,840 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-12 13:48:52] 2025-05-12 17:48:38,840 | INFO     | job 6634148582 has completed (purged errors)
[2025-05-12 13:48:52] 2025-05-12 17:48:38,841 | INFO     | overall cleanup function is called
[2025-05-12 13:48:52] 2025-05-12 17:48:39,849 | INFO     | --- collectZombieJob: --- 10, [9706]
[2025-05-12 13:48:52] 2025-05-12 17:48:39,849 | INFO     | zombie collector waiting for pid 9706
[2025-05-12 13:48:52] 2025-05-12 17:48:39,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-12 13:48:52] 2025-05-12 17:48:39,850 | INFO     | collected zombie processes
[2025-05-12 13:48:52] 2025-05-12 17:48:39,850 | INFO     | will attempt to kill all subprocesses of pid=9706
[2025-05-12 13:48:52] 2025-05-12 17:48:39,945 | INFO     | process IDs to be killed: [9706] (in reverse order)
[2025-05-12 13:48:52] 2025-05-12 17:48:40,007 | WARNING  | found no corresponding commands to process id(s)
[2025-05-12 13:48:52] 2025-05-12 17:48:40,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-12 13:48:52] 2025-05-12 17:48:40,012 | INFO     | did not find any defunct processes belonging to 9706
[2025-05-12 13:48:52] 2025-05-12 17:48:40,015 | INFO     | did not find any defunct processes belonging to 9706
[2025-05-12 13:48:52] 2025-05-12 17:48:40,016 | INFO     | ready for new job
[2025-05-12 13:48:52] 2025-05-12 17:48:40,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-12 13:48:52] 2025-05-12 17:48:40,018 | INFO     | **************************************
[2025-05-12 13:48:52] 2025-05-12 17:48:40,018 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-12 13:48:52] 2025-05-12 17:48:40,018 | INFO     | **************************************
[2025-05-12 13:48:52] 2025-05-12 17:48:40,018 | INFO     | 
[2025-05-12 13:48:52] 2025-05-12 17:48:40,019 | INFO     | architecture information:
[2025-05-12 13:48:52] 2025-05-12 17:48:40,019 | INFO     | executing command: cat /etc/os-release
[2025-05-12 13:48:52] 2025-05-12 17:48:40,038 | INFO     | cat /etc/os-release:
[2025-05-12 13:48:52] NAME="CentOS Linux"
[2025-05-12 13:48:52] VERSION="7 (Core)"
[2025-05-12 13:48:52] ID="centos"
[2025-05-12 13:48:52] ID_LIKE="rhel fedora"
[2025-05-12 13:48:52] VERSION_ID="7"
[2025-05-12 13:48:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-12 13:48:52] ANSI_COLOR="0;31"
[2025-05-12 13:48:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-12 13:48:52] HOME_URL="https://www.centos.org/"
[2025-05-12 13:48:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-12 13:48:52] 
[2025-05-12 13:48:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-12 13:48:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-12 13:48:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-12 13:48:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-12 13:48:52] 
[2025-05-12 13:48:52] 2025-05-12 17:48:40,039 | INFO     | **************************************
[2025-05-12 13:48:52] 2025-05-12 17:48:40,542 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-12 13:48:52] 2025-05-12 17:48:40,563 | INFO     | sufficient remaining disk space (18577620992 B)
[2025-05-12 13:48:52] 2025-05-12 17:48:40,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-12 13:48:52] 2025-05-12 17:48:40,564 | INFO     | current server update state: UPDATING_FINAL
[2025-05-12 13:48:52] 2025-05-12 17:48:40,564 | INFO     | update_server=False
[2025-05-12 13:48:52] 2025-05-12 17:48:40,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-12 13:48:52] 2025-05-12 17:48:40,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-12 13:48:52] 2025-05-12 17:48:40,897 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-12 13:48:52] 2025-05-12 17:48:40,898 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-12 13:48:52] 2025-05-12 17:48:40,898 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-12 13:48:52] 2025-05-12 17:48:40,898 | INFO     | will abort loop
[2025-05-12 13:48:52] 2025-05-12 17:48:41,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-12 13:48:52] 2025-05-12 17:48:41,168 | INFO     | all data control threads have been joined
[2025-05-12 13:48:52] 2025-05-12 17:48:41,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-12 13:48:52] 2025-05-12 17:48:41,517 | INFO     | found 0 job(s) in 20 queues
[2025-05-12 13:48:52] 2025-05-12 17:48:41,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-12 13:48:52] 2025-05-12 17:48:41,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-12 13:48:52] 2025-05-12 17:48:41,570 | INFO     | [job] retrieve thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:41,571 | INFO     | [job] queue monitor thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:41,620 | INFO     | all payload control threads have been joined
[2025-05-12 13:48:52] 2025-05-12 17:48:41,828 | INFO     | all job control threads have been joined
[2025-05-12 13:48:52] 2025-05-12 17:48:41,904 | INFO     | [job] job monitor thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:41,931 | INFO     | [job] create_data_payload thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:42,006 | INFO     | [payload] validate_post thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:42,101 | INFO     | [payload] failed_post thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:42,173 | INFO     | [data] control thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:42,257 | INFO     | [job] validate thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:42,406 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:42,509 | INFO     | [payload] execute_payloads thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:42,626 | INFO     | [payload] control thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:42,769 | INFO     | [data] copytool_in thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:42,772 | INFO     | [payload] validate_pre thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:42,833 | INFO     | [job] control thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:43,104 | INFO     | [data] copytool_out thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:45,438 | INFO     | [data] queue_monitor thread has finished
[2025-05-12 13:48:52] 2025-05-12 17:48:47,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145109223232)>', '<ExcThread(monitor, started 140144304711424)>']
[2025-05-12 13:48:52] 2025-05-12 17:48:47,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-12 13:48:52] 2025-05-12 17:48:47,545 | INFO     | [monitor] control thread has ended
[2025-05-12 13:48:52] 2025-05-12 17:48:52,041 | INFO     | all workflow threads have been joined
[2025-05-12 13:48:52] 2025-05-12 17:48:52,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-12 13:48:52] 2025-05-12 17:48:52,042 | INFO     | traces error code: 0
[2025-05-12 13:48:52] 2025-05-12 17:48:52,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-12 13:48:52] 2025-05-12 17:48:52,161 [wrapper] ==== pilot stdout END ====
[2025-05-12 13:48:52] 2025-05-12 17:48:52,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-12 13:48:52] 2025-05-12 17:48:52,170 [wrapper] pilotpid: 3337
[2025-05-12 13:48:52] 2025-05-12 17:48:52,174 [wrapper] Pilot exit status: 0
[2025-05-12 13:48:52] 2025-05-12 17:48:52,226 [wrapper] pandaids: 6634148582 6634148582
[2025-05-12 13:48:52] 2025-05-12 17:48:52,266 [wrapper] cleanup supervisor_pilot  3583 3338
[2025-05-12 13:48:52] 2025-05-12 17:48:52,271 [wrapper] Test setup, not cleaning
[2025-05-12 13:48:52] 2025-05-12 17:48:52,275 [wrapper] apfmon messages muted
[2025-05-12 13:48:52] 2025-05-12 17:48:52,280 [wrapper] ==== wrapper stdout END ====
[2025-05-12 13:48:52] 2025-05-12 17:48:52,285 [wrapper] ==== wrapper stderr END ====
[2025-05-12 13:48:52]  *** Error codes and diagnostics ***
[2025-05-12 13:48:52]     "exeErrorCode": 0,
[2025-05-12 13:48:52]     "exeErrorDiag": "",
[2025-05-12 13:48:52]     "pilotErrorCode": 0,
[2025-05-12 13:48:52]     "pilotErrorDiag": "",
[2025-05-12 13:48:52]  *** Listing of results directory ***
[2025-05-12 13:48:52] total 633916
[2025-05-12 13:48:52] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas    495897 May  5 03:02 pilot3.tar.gz
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas      5111 May  5 03:05 queuedata.json
[2025-05-12 13:48:52] -rwx------ 1 boincer umatlas     37140 May  5 03:06 runpilot2-wrapper.sh
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas       100 May 12 08:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-12 13:48:52] -rwxr-xr-x 1 boincer umatlas      7986 May 12 08:04 run_atlas
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas       105 May 12 08:04 job.xml
[2025-05-12 13:48:52] -rw-r--r-- 3 boincer umatlas 222759667 May 12 08:04 EVNT.44506061._000155.pool.root.1
[2025-05-12 13:48:52] -rw-r--r-- 3 boincer umatlas 222759667 May 12 08:04 ATLAS.root_0
[2025-05-12 13:48:52] -rw-r--r-- 2 boincer umatlas     17569 May 12 08:04 start_atlas.sh
[2025-05-12 13:48:52] drwxrwx--x 2 boincer umatlas      4096 May 12 08:04 shared
[2025-05-12 13:48:52] -rw-r--r-- 2 boincer umatlas    508871 May 12 08:04 input.tar.gz
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas         0 May 12 08:04 boinc_lockfile
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas      2555 May 12 11:28 pandaJob.out
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas       462 May 12 11:28 setup.sh.local
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas    996995 May 12 11:29 agis_schedconf.cvmfs.json
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas   1596741 May 12 11:29 agis_ddmendpoints.agis.ALL.json
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas      5907 May 12 13:40 init_data.xml
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas 197532000 May 12 13:47 HITS.44506063._005148.pool.root.1
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas        96 May 12 13:48 pilot_heartbeat.json
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas       531 May 12 13:48 boinc_task_state.xml
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas      1051 May 12 13:48 memory_monitor_summary.json
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas    354855 May 12 13:48 log.44506063._005148.job.log.tgz.1
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas      7754 May 12 13:48 heartbeat.json
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas        29 May 12 13:48 wrapper_checkpoint.txt
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas      8192 May 12 13:48 boinc_mmap_file
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas      4539 May 12 13:48 pilotlog.txt
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas    760408 May 12 13:48 log.44506063._005148.job.log.1
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas       357 May 12 13:48 output.list
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas       620 May 12 13:48 runtime_log
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas   1136640 May 12 13:48 result.tar.gz
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas     11473 May 12 13:48 runtime_log.err
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas       786 May 12 13:48 AEBMDmS54V7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmGh0LDmRXyrMn.diag
[2025-05-12 13:48:52] -rw-r--r-- 1 boincer umatlas     22952 May 12 13:48 stderr.txt
[2025-05-12 13:48:52] HITS file was successfully produced:
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas 197532000 May 12 13:47 shared/HITS.pool.root.1
[2025-05-12 13:48:52]  *** Contents of shared directory: ***
[2025-05-12 13:48:52] total 412080
[2025-05-12 13:48:52] -rw-r--r-- 3 boincer umatlas 222759667 May 12 08:04 ATLAS.root_0
[2025-05-12 13:48:52] -rw-r--r-- 2 boincer umatlas     17569 May 12 08:04 start_atlas.sh
[2025-05-12 13:48:52] -rw-r--r-- 2 boincer umatlas    508871 May 12 08:04 input.tar.gz
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas 197532000 May 12 13:47 HITS.pool.root.1
[2025-05-12 13:48:52] -rw------- 1 boincer umatlas   1136640 May 12 13:48 result.tar.gz
13:48:54 (31058): run_atlas exited; CPU time 58289.214467
13:48:54 (31058): called boinc_finish(0)

</stderr_txt>
]]>

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