Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:01:13 (1154295): wrapper (7.7.26015): starting
05:01:13 (1154295): wrapper: running run_atlas (--nthreads 2)
[2025-05-09 05:01:13] Arguments: --nthreads 2
[2025-05-09 05:01:13] Threads: 2
[2025-05-09 05:01:13] Checking for CVMFS
[2025-05-09 05:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-09 05:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-09 05:01:13] Running cvmfs_config stat atlas.cern.ch
[2025-05-09 05:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-09 05:01:13] 2.9.2.0 7730 5554 60880 145778 0 56 34734307 36864001 0 130560 0 2956920 99.987 1455211 6126 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-09 05:01:13] CVMFS is ok
[2025-05-09 05:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-09 05:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-09 05:01:13] Further information can be found at the LHC@home message board.
[2025-05-09 05:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-09 05:01:13] Checking for apptainer binary...
[2025-05-09 05:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-09 05:01:13] Running /usr/bin/apptainer --version
[2025-05-09 05:01:13] apptainer version 1.3.6-6.1
[2025-05-09 05:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-09 05:01:13] thA315
[2025-05-09 05:01:13] apptainer works
[2025-05-09 05:01:13] Set ATHENA_PROC_NUMBER=2
[2025-05-09 05:01:13] Set ATHENA_CORE_NUMBER=2
[2025-05-09 05:01:14] Starting ATLAS job with PandaID=6635474912
[2025-05-09 05:01:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-09 07:19:38]  *** The last 200 lines of the pilot log: ***
[2025-05-09 07:19:38] 2025-05-09 05:19:24,588 | INFO     | extracted standard info from prmon json
[2025-05-09 07:19:38] 2025-05-09 05:19:24,588 | INFO     | extracted standard memory fields from prmon json
[2025-05-09 07:19:38] 2025-05-09 05:19:24,588 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-09 07:19:38] 2025-05-09 05:19:24,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-09 07:19:38] 2025-05-09 05:19:24,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-09 07:19:38] 2025-05-09 05:19:24,589 | INFO     | fitting pss+swap vs Time
[2025-05-09 07:19:38] 2025-05-09 05:19:24,589 | INFO     | sum of square deviations: 779958810.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,589 | INFO     | sum of deviations: 26920186025.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,589 | INFO     | mean x: 1746763832.5
[2025-05-09 07:19:38] 2025-05-09 05:19:24,589 | INFO     | mean y: 2232624.632352941
[2025-05-09 07:19:38] 2025-05-09 05:19:24,589 | INFO     | -- intersect: -60287114337.987305
[2025-05-09 07:19:38] 2025-05-09 05:19:24,589 | INFO     | intersect: -60287114337.987305
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | chi2: 3.2862698670879342
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | sum of square deviations: 697054930.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | sum of deviations: 33530460724.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | mean x: 1746763680.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | mean y: 2244370.2977099237
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | -- intersect: -84022397656.62218
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | intersect: -84022397656.62218
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | chi2: 2.642939787942477
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | current chi2=2.642939787942477 (change=19.57630094802688 %)
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | right removable region: 130
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | sum of square deviations: 697054930.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | sum of deviations: 2410904586.000002
[2025-05-09 07:19:38] 2025-05-09 05:19:24,590 | INFO     | mean x: 1746763985.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | mean y: 2277389.755725191
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | -- intersect: -6039256958.32806
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | intersect: -6039256958.32806
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | chi2: 1.49797947139714
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | current chi2=1.49797947139714 (change=54.41702805970265 %)
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | sum of square deviations: 620244187.5
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | sum of deviations: -14179750363.999998
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | mean x: 1746764137.5
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | mean y: 2310335.492063492
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | -- intersect: 39936065320.56037
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | intersect: 39936065320.56037
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | chi2: 0.7683537417322535
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | current chi2=0.7683537417322535 (change=48.707325006555465 %)
[2025-05-09 07:19:38] 2025-05-09 05:19:24,591 | INFO     | sum of square deviations: 549294020.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | sum of deviations: -8807255457.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | mean x: 1746764290.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | mean y: 2298783.917355372
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | -- intersect: 28009520353.87952
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | intersect: 28009520353.87952
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | chi2: 0.717120461457359
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | current chi2=0.717120461457359 (change=6.667928779703612 %)
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | left removable region: 30
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | sum of square deviations: 310052325.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | sum of deviations: 1071917437.0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | mean x: 1746764564.5
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | mean y: 2308982.94
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | -- intersect: -6036631041.203542
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | intersect: -6036631041.203542
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | chi2: 0.002801093340467361
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | -- intersect: -6036631041.203542
[2025-05-09 07:19:38] 2025-05-09 05:19:24,592 | INFO     | current memory leak: 3.46 B/s (using 100 data points, chi2=0.00)
[2025-05-09 07:19:38] 2025-05-09 05:19:24,593 | INFO     | ..............................
[2025-05-09 07:19:38] 2025-05-09 05:19:24,593 | INFO     | . Timing measurements:
[2025-05-09 07:19:38] 2025-05-09 05:19:24,593 | INFO     | . get job = 0 s
[2025-05-09 07:19:38] 2025-05-09 05:19:24,593 | INFO     | . initial setup = 1 s
[2025-05-09 07:19:38] 2025-05-09 05:19:24,593 | INFO     | . payload setup = 6 s
[2025-05-09 07:19:38] 2025-05-09 05:19:24,593 | INFO     | . stage-in = 0 s
[2025-05-09 07:19:38] 2025-05-09 05:19:24,593 | INFO     | . payload execution = 8239 s
[2025-05-09 07:19:38] 2025-05-09 05:19:24,593 | INFO     | . stage-out = 0 s
[2025-05-09 07:19:38] 2025-05-09 05:19:24,593 | INFO     | . log creation = 0 s
[2025-05-09 07:19:38] 2025-05-09 05:19:24,593 | INFO     | ..............................
[2025-05-09 07:19:38] 2025-05-09 05:19:24,622 | INFO     | 
[2025-05-09 07:19:38] 2025-05-09 05:19:24,622 | INFO     | job summary report
[2025-05-09 07:19:38] 2025-05-09 05:19:24,622 | INFO     | --------------------------------------------------
[2025-05-09 07:19:38] 2025-05-09 05:19:24,622 | INFO     | PanDA job id: 6635474912
[2025-05-09 07:19:38] 2025-05-09 05:19:24,622 | INFO     | task id: 44506063
[2025-05-09 07:19:38] 2025-05-09 05:19:24,622 | INFO     | errors: (none)
[2025-05-09 07:19:38] 2025-05-09 05:19:24,622 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-09 07:19:38] 2025-05-09 05:19:24,622 | INFO     | pilot state: finished 
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | transexitcode: 0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | exeerrorcode: 0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | exeerrordiag: 
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | exitcode: 0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | exitmsg: OK
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | cpuconsumptiontime: 15209 s
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | nevents: 400
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | neventsw: 0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | pid: 1164337
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | pgrp: 1164337
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | corecount: 2
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | event service: False
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | sizes: {0: 2393742, 7: 2393948, 11: 2393976, 8250: 2421764, 8251: 2430767, 8260: 2430881}
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | --------------------------------------------------
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | 
[2025-05-09 07:19:38] 2025-05-09 05:19:24,623 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-09 07:19:38] 2025-05-09 05:19:24,633 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | job 6635474912 has completed (purged errors)
[2025-05-09 07:19:38] 2025-05-09 05:19:24,634 | INFO     | overall cleanup function is called
[2025-05-09 07:19:38] 2025-05-09 05:19:25,640 | INFO     | --- collectZombieJob: --- 10, [1164337]
[2025-05-09 07:19:38] 2025-05-09 05:19:25,641 | INFO     | zombie collector waiting for pid 1164337
[2025-05-09 07:19:38] 2025-05-09 05:19:25,641 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-09 07:19:38] 2025-05-09 05:19:25,641 | INFO     | collected zombie processes
[2025-05-09 07:19:38] 2025-05-09 05:19:25,641 | INFO     | will attempt to kill all subprocesses of pid=1164337
[2025-05-09 07:19:38] 2025-05-09 05:19:25,673 | INFO     | process IDs to be killed: [1164337] (in reverse order)
[2025-05-09 07:19:38] 2025-05-09 05:19:25,693 | WARNING  | found no corresponding commands to process id(s)
[2025-05-09 07:19:38] 2025-05-09 05:19:25,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-09 07:19:38] 2025-05-09 05:19:25,694 | INFO     | did not find any defunct processes belonging to 1164337
[2025-05-09 07:19:38] 2025-05-09 05:19:25,695 | INFO     | did not find any defunct processes belonging to 1164337
[2025-05-09 07:19:38] 2025-05-09 05:19:25,695 | INFO     | ready for new job
[2025-05-09 07:19:38] 2025-05-09 05:19:25,695 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-09 07:19:38] 2025-05-09 05:19:25,695 | INFO     | **************************************
[2025-05-09 07:19:38] 2025-05-09 05:19:25,695 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-09 07:19:38] 2025-05-09 05:19:25,695 | INFO     | **************************************
[2025-05-09 07:19:38] 2025-05-09 05:19:25,695 | INFO     | 
[2025-05-09 07:19:38] 2025-05-09 05:19:25,695 | INFO     | architecture information:
[2025-05-09 07:19:38] 2025-05-09 05:19:25,696 | INFO     | executing command: cat /etc/os-release
[2025-05-09 07:19:38] 2025-05-09 05:19:25,703 | INFO     | cat /etc/os-release:
[2025-05-09 07:19:38] NAME="CentOS Linux"
[2025-05-09 07:19:38] VERSION="7 (Core)"
[2025-05-09 07:19:38] ID="centos"
[2025-05-09 07:19:38] ID_LIKE="rhel fedora"
[2025-05-09 07:19:38] VERSION_ID="7"
[2025-05-09 07:19:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-09 07:19:38] ANSI_COLOR="0;31"
[2025-05-09 07:19:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-09 07:19:38] HOME_URL="https://www.centos.org/"
[2025-05-09 07:19:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-09 07:19:38] 
[2025-05-09 07:19:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-09 07:19:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-09 07:19:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-09 07:19:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-09 07:19:38] 
[2025-05-09 07:19:38] 2025-05-09 05:19:25,703 | INFO     | **************************************
[2025-05-09 07:19:38] 2025-05-09 05:19:26,206 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-09 07:19:38] 2025-05-09 05:19:26,217 | INFO     | sufficient remaining disk space (485668945920 B)
[2025-05-09 07:19:38] 2025-05-09 05:19:26,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-09 07:19:38] 2025-05-09 05:19:26,217 | INFO     | current server update state: UPDATING_FINAL
[2025-05-09 07:19:38] 2025-05-09 05:19:26,217 | INFO     | update_server=False
[2025-05-09 07:19:38] 2025-05-09 05:19:26,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-09 07:19:38] 2025-05-09 05:19:26,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-09 07:19:38] 2025-05-09 05:19:26,500 | INFO     | found 0 job(s) in 20 queues
[2025-05-09 07:19:38] 2025-05-09 05:19:26,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-09 07:19:38] 2025-05-09 05:19:26,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-09 07:19:38] 2025-05-09 05:19:26,564 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-09 07:19:38] 2025-05-09 05:19:26,564 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-09 07:19:38] 2025-05-09 05:19:26,564 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-09 07:19:38] 2025-05-09 05:19:26,565 | INFO     | will abort loop
[2025-05-09 07:19:38] 2025-05-09 05:19:26,703 | INFO     | all data control threads have been joined
[2025-05-09 07:19:38] 2025-05-09 05:19:26,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-09 07:19:38] 2025-05-09 05:19:26,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-09 07:19:38] 2025-05-09 05:19:27,206 | INFO     | all job control threads have been joined
[2025-05-09 07:19:38] 2025-05-09 05:19:27,223 | INFO     | [job] retrieve thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:27,224 | INFO     | [job] queue monitor thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:27,356 | INFO     | all payload control threads have been joined
[2025-05-09 07:19:38] 2025-05-09 05:19:27,570 | INFO     | [job] job monitor thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:27,621 | INFO     | [payload] execute_payloads thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:27,694 | INFO     | [data] copytool_in thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:27,709 | INFO     | [data] control thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:27,915 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:27,952 | INFO     | [job] validate thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:28,004 | INFO     | [job] create_data_payload thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:28,066 | INFO     | [payload] validate_pre thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:28,212 | INFO     | [job] control thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:28,362 | INFO     | [payload] control thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:28,463 | INFO     | [payload] validate_post thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:28,638 | INFO     | [payload] failed_post thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:28,835 | INFO     | [data] copytool_out thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:30,860 | INFO     | [data] queue_monitor thread has finished
[2025-05-09 07:19:38] 2025-05-09 05:19:32,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395025454912)>', '<ExcThread(monitor, started 140394528487168)>']
[2025-05-09 07:19:38] 2025-05-09 05:19:33,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-09 07:19:38] 2025-05-09 05:19:33,539 | INFO     | [monitor] control thread has ended
[2025-05-09 07:19:38] 2025-05-09 05:19:37,864 | INFO     | all workflow threads have been joined
[2025-05-09 07:19:38] 2025-05-09 05:19:37,865 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-09 07:19:38] 2025-05-09 05:19:37,865 | INFO     | traces error code: 0
[2025-05-09 07:19:38] 2025-05-09 05:19:37,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-09 07:19:38] 2025-05-09 05:19:37,908 [wrapper] ==== pilot stdout END ====
[2025-05-09 07:19:38] 2025-05-09 05:19:37,911 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-09 07:19:38] 2025-05-09 05:19:37,913 [wrapper] pilotpid: 1157928
[2025-05-09 07:19:38] 2025-05-09 05:19:37,915 [wrapper] Pilot exit status: 0
[2025-05-09 07:19:38] 2025-05-09 05:19:37,921 [wrapper] pandaids: 6635474912
[2025-05-09 07:19:38] 2025-05-09 05:19:37,932 [wrapper] cleanup supervisor_pilot 1181050 1157929
[2025-05-09 07:19:38] 2025-05-09 05:19:37,934 [wrapper] Test setup, not cleaning
[2025-05-09 07:19:38] 2025-05-09 05:19:37,936 [wrapper] apfmon messages muted
[2025-05-09 07:19:38] 2025-05-09 05:19:37,938 [wrapper] ==== wrapper stdout END ====
[2025-05-09 07:19:38] 2025-05-09 05:19:37,940 [wrapper] ==== wrapper stderr END ====
[2025-05-09 07:19:38]  *** Error codes and diagnostics ***
[2025-05-09 07:19:38]     "exeErrorCode": 0,
[2025-05-09 07:19:38]     "exeErrorDiag": "",
[2025-05-09 07:19:38]     "pilotErrorCode": 0,
[2025-05-09 07:19:38]     "pilotErrorDiag": "",
[2025-05-09 07:19:38]  *** Listing of results directory ***
[2025-05-09 07:19:38] total 411924
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc    495897 May  7 00:35 pilot3.tar.gz
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc      5111 May  7 00:56 queuedata.json
[2025-05-09 07:19:38] -rwx------ 1 boinc boinc     37140 May  7 00:56 runpilot2-wrapper.sh
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc       100 May  9 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-09 07:19:38] -rwxr-xr-x 1 boinc boinc      7986 May  9 05:01 run_atlas
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc       105 May  9 05:01 job.xml
[2025-05-09 07:19:38] -rw-r--r-- 2 boinc boinc 223740127 May  9 05:01 EVNT.44506061._001188.pool.root.1
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc      6689 May  9 05:01 init_data.xml
[2025-05-09 07:19:38] drwxrwx--x 2 boinc boinc      4096 May  9 05:01 shared
[2025-05-09 07:19:38] -rw-r--r-- 2 boinc boinc    508875 May  9 05:01 input.tar.gz
[2025-05-09 07:19:38] -rw-r--r-- 2 boinc boinc     17569 May  9 05:01 start_atlas.sh
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc         0 May  9 05:01 boinc_lockfile
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc      2558 May  9 05:01 pandaJob.out
[2025-05-09 07:19:38] -rw------- 1 boinc boinc       424 May  9 05:01 setup.sh.local
[2025-05-09 07:19:38] -rw------- 1 boinc boinc    997937 May  9 05:01 agis_schedconf.cvmfs.json
[2025-05-09 07:19:38] -rw------- 1 boinc boinc   1596741 May  9 05:01 agis_ddmendpoints.agis.ALL.json
[2025-05-09 07:19:38] drwx------ 4 boinc boinc      4096 May  9 05:01 pilot3
[2025-05-09 07:19:38] -rw------- 1 boinc boinc 192180337 May  9 07:18 HITS.44506063._029891.pool.root.1
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc       529 May  9 07:18 boinc_task_state.xml
[2025-05-09 07:19:38] -rw------- 1 boinc boinc        95 May  9 07:19 pilot_heartbeat.json
[2025-05-09 07:19:38] -rw------- 1 boinc boinc      1017 May  9 07:19 memory_monitor_summary.json
[2025-05-09 07:19:38] -rw------- 1 boinc boinc    241521 May  9 07:19 log.44506063._029891.job.log.tgz.1
[2025-05-09 07:19:38] -rw------- 1 boinc boinc      7647 May  9 07:19 heartbeat.json
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc      8192 May  9 07:19 boinc_mmap_file
[2025-05-09 07:19:38] -rw------- 1 boinc boinc      4543 May  9 07:19 pilotlog.txt
[2025-05-09 07:19:38] -rw------- 1 boinc boinc    778745 May  9 07:19 log.44506063._029891.job.log.1
[2025-05-09 07:19:38] -rw------- 1 boinc boinc       357 May  9 07:19 output.list
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc       620 May  9 07:19 runtime_log
[2025-05-09 07:19:38] -rw------- 1 boinc boinc   1034240 May  9 07:19 result.tar.gz
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc     11099 May  9 07:19 runtime_log.err
[2025-05-09 07:19:38] -rw------- 1 boinc boinc       659 May  9 07:19 LzsLDmOOgW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmVG5LDmfC0Nen.diag
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc        27 May  9 07:19 wrapper_checkpoint.txt
[2025-05-09 07:19:38] -rw-r--r-- 1 boinc boinc     20703 May  9 07:19 stderr.txt
[2025-05-09 07:19:38] HITS file was successfully produced:
[2025-05-09 07:19:38] -rw------- 1 boinc boinc 192180337 May  9 07:18 shared/HITS.pool.root.1
[2025-05-09 07:19:38]  *** Contents of shared directory: ***
[2025-05-09 07:19:38] total 407720
[2025-05-09 07:19:38] -rw-r--r-- 2 boinc boinc 223740127 May  9 05:01 ATLAS.root_0
[2025-05-09 07:19:38] -rw-r--r-- 2 boinc boinc    508875 May  9 05:01 input.tar.gz
[2025-05-09 07:19:38] -rw-r--r-- 2 boinc boinc     17569 May  9 05:01 start_atlas.sh
[2025-05-09 07:19:38] -rw------- 1 boinc boinc 192180337 May  9 07:18 HITS.pool.root.1
[2025-05-09 07:19:38] -rw------- 1 boinc boinc   1034240 May  9 07:19 result.tar.gz
07:19:40 (1154295): run_atlas exited; CPU time 15245.323037
07:19:40 (1154295): called boinc_finish(0)

</stderr_txt>
]]>

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