Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:27:51 (2963751): wrapper (7.7.26015): starting
16:27:51 (2963751): wrapper: running run_atlas (--nthreads 8)
[2025-05-08 16:27:51] Arguments: --nthreads 8
[2025-05-08 16:27:51] Threads: 8
[2025-05-08 16:27:51] Checking for CVMFS
[2025-05-08 16:27:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 16:27:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 16:27:52] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 16:27:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 16:27:52] 2.12.6.0 20986 75141 608548 145769 2 192 23782604 32935936 11018 130560 0 446083287 99.691 353761588 19033 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-08 16:27:52] CVMFS is ok
[2025-05-08 16:27:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-08 16:27:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-08 16:27:52] Further information can be found at the LHC@home message board.
[2025-05-08 16:27:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 16:27:52] Checking for apptainer binary...
[2025-05-08 16:27:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 16:27:52] Running /usr/bin/apptainer --version
[2025-05-08 16:27:52] apptainer version 1.4.0-1.el9
[2025-05-08 16:27:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 16:27:52] lc-10-10.aglt2.org
[2025-05-08 16:27:52] apptainer works
[2025-05-08 16:27:52] Set ATHENA_PROC_NUMBER=8
[2025-05-08 16:27:52] Set ATHENA_CORE_NUMBER=8
[2025-05-08 16:27:52] Starting ATLAS job with PandaID=6638324415
[2025-05-08 16:27:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 17:57:28]  *** The last 200 lines of the pilot log: ***
[2025-05-08 17:57:28]  guid=287626ca-412b-466b-832e-da6a3b118b17
[2025-05-08 17:57:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-08 17:57:28]  is_altstaged=None
[2025-05-08 17:57:28]  is_tar=False
[2025-05-08 17:57:28]  lfn=log.44506063._055668.job.log.tgz.1
[2025-05-08 17:57:28]  mtime=0
[2025-05-08 17:57:28]  protocol_id=None
[2025-05-08 17:57:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-08 17:57:28]  replicas=None
[2025-05-08 17:57:28]  scope=mc23_13p6TeV
[2025-05-08 17:57:28]  status=None
[2025-05-08 17:57:28]  status_code=0
[2025-05-08 17:57:28]  storage_token=
[2025-05-08 17:57:28]  surl=/tmp/boinchome/slots/11/PanDA_Pilot-6638324415/log.44506063._055668.job.log.tgz.1
[2025-05-08 17:57:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/b9/log.44506063._055668.job.log.tgz.1
[2025-05-08 17:57:28]  workdir=None
[2025-05-08 17:57:28] ]
[2025-05-08 17:57:28] 2025-05-08 21:57:02,096 | INFO     | transferring file log.44506063._055668.job.log.tgz.1 from /tmp/boinchome/slots/11/PanDA_Pilot-6638324415/log.44506063._055668.job.log.tgz.1 to /tmp/boinchome/slots
[2025-05-08 17:57:28] 2025-05-08 21:57:02,096 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/11/PanDA_Pilot-6638324415/log.44506063._055668.job.log.tgz.1 /tmp/boinchome/slots/11/log.44506063._055668.j
[2025-05-08 17:57:28] 2025-05-08 21:57:02,110 | INFO     | adding to output.list: log.44506063._055668.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/b9/log.44506063._055668.job.log.tg
[2025-05-08 17:57:28] 2025-05-08 21:57:02,110 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-08 17:57:28] 2025-05-08 21:57:02,111 | INFO     | summary of transferred files:
[2025-05-08 17:57:28] 2025-05-08 21:57:02,111 | INFO     |  -- lfn=log.44506063._055668.job.log.tgz.1, status_code=0, status=transferred
[2025-05-08 17:57:28] 2025-05-08 21:57:02,111 | INFO     | stage-out finished correctly
[2025-05-08 17:57:28] 2025-05-08 21:57:04,035 | INFO     | monitor loop #390: job 0:6638324415 is in state 'finished'
[2025-05-08 17:57:28] 2025-05-08 21:57:04,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-08 17:57:28] 2025-05-08 21:57:04,628 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-08 17:57:28] 2025-05-08 21:57:04,718 | INFO     | job 6638324415 has state=finished
[2025-05-08 17:57:28] 2025-05-08 21:57:04,718 | INFO     | preparing for final server update for job 6638324415 in state='finished'
[2025-05-08 17:57:28] 2025-05-08 21:57:04,777 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-05-08 17:57:28] 2025-05-08 21:57:04,777 | INFO     | this job has now completed (state=finished)
[2025-05-08 17:57:28] 2025-05-08 21:57:04,777 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-08 17:57:28] 2025-05-08 21:57:04,777 | INFO     | log transfer has been attempted: DONE
[2025-05-08 17:57:28] 2025-05-08 21:57:04,778 | INFO     | job 6638324415 has finished - writing final server update
[2025-05-08 17:57:28] 2025-05-08 21:57:04,778 | INFO     | total number of processed events: 400 (read)
[2025-05-08 17:57:28] 2025-05-08 21:57:04,796 | INFO     | executing command: lscpu
[2025-05-08 17:57:28] 2025-05-08 21:57:04,867 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-08 17:57:28] 2025-05-08 21:57:06,539 | INFO     | monitor loop #391: job 0:6638324415 is in state 'finished'
[2025-05-08 17:57:28] 2025-05-08 21:57:06,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-08 17:57:28] 2025-05-08 21:57:08,515 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-08 17:57:28] 2025-05-08 21:57:08,515 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6638324415/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 17:57:28] 2025-05-08 21:57:08,516 | INFO     | extracted standard info from prmon json
[2025-05-08 17:57:28] 2025-05-08 21:57:08,516 | INFO     | extracted standard memory fields from prmon json
[2025-05-08 17:57:28] 2025-05-08 21:57:08,516 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-08 17:57:28] 2025-05-08 21:57:08,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-08 17:57:28] 2025-05-08 21:57:08,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-08 17:57:28] 2025-05-08 21:57:08,519 | INFO     | fitting pss+swap vs Time
[2025-05-08 17:57:28] 2025-05-08 21:57:08,519 | INFO     | sum of square deviations: 164765880.0
[2025-05-08 17:57:28] 2025-05-08 21:57:08,520 | INFO     | sum of deviations: 22366593913.999996
[2025-05-08 17:57:28] 2025-05-08 21:57:08,520 | INFO     | mean x: 1746738855.0
[2025-05-08 17:57:28] 2025-05-08 21:57:08,520 | INFO     | mean y: 2053467.024691358
[2025-05-08 17:57:28] 2025-05-08 21:57:08,520 | INFO     | -- intersect: -237113778060.65762
[2025-05-08 17:57:28] 2025-05-08 21:57:08,520 | INFO     | intersect: -237113778060.65762
[2025-05-08 17:57:28] 2025-05-08 21:57:08,520 | INFO     | chi2: 2.2149929028660202
[2025-05-08 17:57:28] 2025-05-08 21:57:08,520 | INFO     | -- intersect: -237113778060.65762
[2025-05-08 17:57:28] 2025-05-08 21:57:08,520 | INFO     | current memory leak: 135.75 B/s (using 81 data points, chi2=2.21)
[2025-05-08 17:57:28] 2025-05-08 21:57:08,521 | INFO     | ..............................
[2025-05-08 17:57:28] 2025-05-08 21:57:08,521 | INFO     | . Timing measurements:
[2025-05-08 17:57:28] 2025-05-08 21:57:08,521 | INFO     | . get job = 0 s
[2025-05-08 17:57:28] 2025-05-08 21:57:08,521 | INFO     | . initial setup = 5 s
[2025-05-08 17:57:28] 2025-05-08 21:57:08,521 | INFO     | . payload setup = 4 s
[2025-05-08 17:57:28] 2025-05-08 21:57:08,521 | INFO     | . stage-in = 0 s
[2025-05-08 17:57:28] 2025-05-08 21:57:08,521 | INFO     | . payload execution = 5312 s
[2025-05-08 17:57:28] 2025-05-08 21:57:08,521 | INFO     | . stage-out = 0 s
[2025-05-08 17:57:28] 2025-05-08 21:57:08,521 | INFO     | . log creation = 0 s
[2025-05-08 17:57:28] 2025-05-08 21:57:08,521 | INFO     | ..............................
[2025-05-08 17:57:28] 2025-05-08 21:57:08,612 | INFO     | 
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | job summary report
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | --------------------------------------------------
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | PanDA job id: 6638324415
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | task id: 44506063
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | errors: (none)
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | pilot state: finished 
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | transexitcode: 0
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | exeerrorcode: 0
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | exeerrordiag: 
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | exitcode: 0
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | exitmsg: OK
[2025-05-08 17:57:28] 2025-05-08 21:57:08,613 | INFO     | cpuconsumptiontime: 34794 s
[2025-05-08 17:57:28] 2025-05-08 21:57:08,614 | INFO     | nevents: 400
[2025-05-08 17:57:28] 2025-05-08 21:57:08,614 | INFO     | neventsw: 0
[2025-05-08 17:57:28] 2025-05-08 21:57:08,614 | INFO     | pid: 2975181
[2025-05-08 17:57:28] 2025-05-08 21:57:08,614 | INFO     | pgrp: 2975181
[2025-05-08 17:57:28] 2025-05-08 21:57:08,614 | INFO     | corecount: 8
[2025-05-08 17:57:28] 2025-05-08 21:57:08,614 | INFO     | event service: False
[2025-05-08 17:57:28] 2025-05-08 21:57:08,614 | INFO     | sizes: {0: 2393740, 4: 2393946, 11: 2393974, 5321: 2420417, 5322: 2429360, 5324: 2429416, 5328: 2429714}
[2025-05-08 17:57:28] 2025-05-08 21:57:08,614 | INFO     | --------------------------------------------------
[2025-05-08 17:57:28] 2025-05-08 21:57:08,614 | INFO     | 
[2025-05-08 17:57:28] 2025-05-08 21:57:08,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-05-08 17:57:28] 2025-05-08 21:57:08,632 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,633 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,633 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,633 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,633 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,633 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,633 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,634 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 17:57:28] 2025-05-08 21:57:08,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,634 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 17:57:28] 2025-05-08 21:57:08,634 | INFO     | job 6638324415 has completed (purged errors)
[2025-05-08 17:57:28] 2025-05-08 21:57:08,634 | INFO     | overall cleanup function is called
[2025-05-08 17:57:28] 2025-05-08 21:57:09,642 | INFO     | --- collectZombieJob: --- 10, [2975181]
[2025-05-08 17:57:28] 2025-05-08 21:57:09,643 | INFO     | zombie collector waiting for pid 2975181
[2025-05-08 17:57:28] 2025-05-08 21:57:09,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 17:57:28] 2025-05-08 21:57:09,643 | INFO     | collected zombie processes
[2025-05-08 17:57:28] 2025-05-08 21:57:09,643 | INFO     | will attempt to kill all subprocesses of pid=2975181
[2025-05-08 17:57:28] 2025-05-08 21:57:09,979 | INFO     | process IDs to be killed: [2975181] (in reverse order)
[2025-05-08 17:57:28] 2025-05-08 21:57:10,071 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 17:57:28] 2025-05-08 21:57:10,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 17:57:28] 2025-05-08 21:57:10,084 | INFO     | did not find any defunct processes belonging to 2975181
[2025-05-08 17:57:28] 2025-05-08 21:57:10,094 | INFO     | did not find any defunct processes belonging to 2975181
[2025-05-08 17:57:28] 2025-05-08 21:57:10,095 | INFO     | ready for new job
[2025-05-08 17:57:28] 2025-05-08 21:57:10,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 17:57:28] 2025-05-08 21:57:10,097 | INFO     | **************************************
[2025-05-08 17:57:28] 2025-05-08 21:57:10,097 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 17:57:28] 2025-05-08 21:57:10,098 | INFO     | **************************************
[2025-05-08 17:57:28] 2025-05-08 21:57:10,098 | INFO     | 
[2025-05-08 17:57:28] 2025-05-08 21:57:10,115 | INFO     | architecture information:
[2025-05-08 17:57:28] 2025-05-08 21:57:10,115 | INFO     | executing command: cat /etc/os-release
[2025-05-08 17:57:28] 2025-05-08 21:57:10,129 | INFO     | cat /etc/os-release:
[2025-05-08 17:57:28] NAME="CentOS Linux"
[2025-05-08 17:57:28] VERSION="7 (Core)"
[2025-05-08 17:57:28] ID="centos"
[2025-05-08 17:57:28] ID_LIKE="rhel fedora"
[2025-05-08 17:57:28] VERSION_ID="7"
[2025-05-08 17:57:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 17:57:28] ANSI_COLOR="0;31"
[2025-05-08 17:57:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 17:57:28] HOME_URL="https://www.centos.org/"
[2025-05-08 17:57:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 17:57:28] 
[2025-05-08 17:57:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 17:57:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 17:57:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 17:57:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 17:57:28] 
[2025-05-08 17:57:28] 2025-05-08 21:57:10,129 | INFO     | **************************************
[2025-05-08 17:57:28] 2025-05-08 21:57:10,632 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-05-08 17:57:28] 2025-05-08 21:57:10,646 | INFO     | sufficient remaining disk space (92401565696 B)
[2025-05-08 17:57:28] 2025-05-08 21:57:10,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 17:57:28] 2025-05-08 21:57:10,647 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 17:57:28] 2025-05-08 21:57:10,647 | INFO     | update_server=False
[2025-05-08 17:57:28] 2025-05-08 21:57:10,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 17:57:28] 2025-05-08 21:57:10,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 17:57:28] 2025-05-08 21:57:10,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 17:57:28] 2025-05-08 21:57:10,648 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-08 17:57:28] 2025-05-08 21:57:10,648 | INFO     | aborting loop
[2025-05-08 17:57:28] 2025-05-08 21:57:10,649 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 17:57:28] 2025-05-08 21:57:10,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 17:57:28] 2025-05-08 21:57:10,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 17:57:28] 2025-05-08 21:57:10,723 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 17:57:28] 2025-05-08 21:57:10,741 | INFO     | all payload control threads have been joined
[2025-05-08 17:57:28] 2025-05-08 21:57:11,652 | INFO     | [job] retrieve thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:11,654 | INFO     | [job] job monitor thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:11,746 | INFO     | all data control threads have been joined
[2025-05-08 17:57:28] 2025-05-08 21:57:11,746 | INFO     | [payload] control thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:11,900 | INFO     | [payload] failed_post thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:11,982 | INFO     | [payload] validate_post thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:12,145 | INFO     | all job control threads have been joined
[2025-05-08 17:57:28] 2025-05-08 21:57:12,376 | INFO     | [job] validate thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:12,654 | INFO     | [data] copytool_out thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:12,706 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:12,717 | INFO     | [data] copytool_in thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:12,751 | INFO     | [data] control thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:12,797 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:13,016 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:13,151 | INFO     | [job] control thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:13,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 17:57:28] 2025-05-08 21:57:14,629 | INFO     | [job] queue monitor thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:14,728 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:21,695 | INFO     | job.realtimelogging is not enabled
[2025-05-08 17:57:28] 2025-05-08 21:57:22,700 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 17:57:28] 2025-05-08 21:57:22,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531813099328)>', '<ExcThread(monitor, started 140531178919680)>']
[2025-05-08 17:57:28] 2025-05-08 21:57:23,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 17:57:28] 2025-05-08 21:57:23,716 | INFO     | [monitor] control thread has ended
[2025-05-08 17:57:28] 2025-05-08 21:57:27,894 | INFO     | all workflow threads have been joined
[2025-05-08 17:57:28] 2025-05-08 21:57:27,894 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 17:57:28] 2025-05-08 21:57:27,894 | INFO     | traces error code: 0
[2025-05-08 17:57:28] 2025-05-08 21:57:27,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 17:57:28] 2025-05-08 21:57:28,036 [wrapper] ==== pilot stdout END ====
[2025-05-08 17:57:28] 2025-05-08 21:57:28,038 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 17:57:28] 2025-05-08 21:57:28,041 [wrapper] pilotpid: 2967354
[2025-05-08 17:57:28] 2025-05-08 21:57:28,043 [wrapper] Pilot exit status: 0
[2025-05-08 17:57:28] 2025-05-08 21:57:28,052 [wrapper] pandaids: 6638324415
[2025-05-08 17:57:28] 2025-05-08 21:57:28,114 [wrapper] cleanup supervisor_pilot 3272345 2967355
[2025-05-08 17:57:28] 2025-05-08 21:57:28,117 [wrapper] Test setup, not cleaning
[2025-05-08 17:57:28] 2025-05-08 21:57:28,120 [wrapper] apfmon messages muted
[2025-05-08 17:57:28] 2025-05-08 21:57:28,122 [wrapper] ==== wrapper stdout END ====
[2025-05-08 17:57:28] 2025-05-08 21:57:28,124 [wrapper] ==== wrapper stderr END ====
[2025-05-08 17:57:28]  *** Error codes and diagnostics ***
[2025-05-08 17:57:28]     "exeErrorCode": 0,
[2025-05-08 17:57:28]     "exeErrorDiag": "",
[2025-05-08 17:57:28]     "pilotErrorCode": 0,
[2025-05-08 17:57:28]     "pilotErrorDiag": "",
[2025-05-08 17:57:28]  *** Listing of results directory ***
[2025-05-08 17:57:28] total 419908
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas    495897 May  8 10:41 pilot3.tar.gz
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas      5111 May  8 10:47 queuedata.json
[2025-05-08 17:57:28] -rwx------. 1 boincer umatlas     37140 May  8 10:48 runpilot2-wrapper.sh
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas       100 May  8 16:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 17:57:28] -rwxr-xr-x. 1 boincer umatlas      7986 May  8 16:27 run_atlas
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas       105 May  8 16:27 job.xml
[2025-05-08 17:57:28] -rw-r--r--. 2 boincer umatlas 224860419 May  8 16:27 EVNT.44506061._002100.pool.root.1
[2025-05-08 17:57:28] -rw-r--r--. 2 boincer umatlas     17569 May  8 16:27 start_atlas.sh
[2025-05-08 17:57:28] drwxrwx--x. 2 boincer umatlas      4096 May  8 16:27 shared
[2025-05-08 17:57:28] -rw-r--r--. 2 boincer umatlas    508885 May  8 16:27 input.tar.gz
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas         0 May  8 16:27 boinc_lockfile
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas      2558 May  8 16:27 pandaJob.out
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas       467 May  8 16:27 setup.sh.local
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas    997879 May  8 16:28 agis_schedconf.cvmfs.json
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas   1596741 May  8 16:28 agis_ddmendpoints.agis.ALL.json
[2025-05-08 17:57:28] drwx------. 4 boincer umatlas      4096 May  8 16:28 pilot3
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas      6867 May  8 17:45 init_data.xml
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas 199591645 May  8 17:56 HITS.44506063._055668.pool.root.1
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas       529 May  8 17:56 boinc_task_state.xml
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas        95 May  8 17:56 pilot_heartbeat.json
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas      1037 May  8 17:56 memory_monitor_summary.json
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas    327995 May  8 17:57 log.44506063._055668.job.log.tgz.1
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas      7716 May  8 17:57 heartbeat.json
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas      8192 May  8 17:57 boinc_mmap_file
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas        27 May  8 17:57 wrapper_checkpoint.txt
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas      4549 May  8 17:57 pilotlog.txt
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas    514518 May  8 17:57 log.44506063._055668.job.log.1
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas       357 May  8 17:57 output.list
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas       620 May  8 17:57 runtime_log
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas    860160 May  8 17:57 result.tar.gz
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas     11436 May  8 17:57 runtime_log.err
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas       652 May  8 17:57 2NXMDmpiHX7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmkZ9LDmEbF0Tn.diag
[2025-05-08 17:57:28] -rw-r--r--. 1 boincer umatlas     21302 May  8 17:57 stderr.txt
[2025-05-08 17:57:28] HITS file was successfully produced:
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas 199591645 May  8 17:56 shared/HITS.pool.root.1
[2025-05-08 17:57:28]  *** Contents of shared directory: ***
[2025-05-08 17:57:28] total 415876
[2025-05-08 17:57:28] -rw-r--r--. 2 boincer umatlas 224860419 May  8 16:27 ATLAS.root_0
[2025-05-08 17:57:28] -rw-r--r--. 2 boincer umatlas     17569 May  8 16:27 start_atlas.sh
[2025-05-08 17:57:28] -rw-r--r--. 2 boincer umatlas    508885 May  8 16:27 input.tar.gz
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas 199591645 May  8 17:56 HITS.pool.root.1
[2025-05-08 17:57:28] -rw-------. 1 boincer umatlas    860160 May  8 17:57 result.tar.gz
17:57:29 (2963751): run_atlas exited; CPU time 34999.586033
17:57:29 (2963751): called boinc_finish(0)

</stderr_txt>
]]>

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