Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:52:08 (2148431): wrapper (7.7.26015): starting
10:52:08 (2148431): wrapper: running run_atlas (--nthreads 6)
[2025-05-09 10:52:08] Arguments: --nthreads 6
[2025-05-09 10:52:08] Threads: 6
[2025-05-09 10:52:08] Checking for CVMFS
[2025-05-09 10:52:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-09 10:52:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-09 10:52:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-09 10:52:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-09 10:52:09] 2.11.5.0 2114168 9 55764 145776 3 185 37782416 52428800 1750 130560 0 89468 99.998 1242 29 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-09 10:52:09] CVMFS is ok
[2025-05-09 10:52:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-09 10:52:09] Checking for apptainer binary...
[2025-05-09 10:52:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-09 10:52:09] Running /usr/bin/apptainer --version
[2025-05-09 10:52:09] apptainer version 1.3.5-1.el9
[2025-05-09 10:52:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-09 10:52:09] testio008
[2025-05-09 10:52:09] apptainer works
[2025-05-09 10:52:09] Set ATHENA_PROC_NUMBER=6
[2025-05-09 10:52:09] Set ATHENA_CORE_NUMBER=6
[2025-05-09 10:52:09] Starting ATLAS job with PandaID=6638230946
[2025-05-09 10:52:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-09 12:11:28]  *** The last 200 lines of the pilot log: ***
[2025-05-09 12:11:28]  guid=e5d13bea-4fda-4a47-9bec-312a2963987f
[2025-05-09 12:11:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-09 12:11:28]  is_altstaged=None
[2025-05-09 12:11:28]  is_tar=False
[2025-05-09 12:11:28]  lfn=log.44506063._052640.job.log.tgz.1
[2025-05-09 12:11:28]  mtime=0
[2025-05-09 12:11:28]  protocol_id=None
[2025-05-09 12:11:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-09 12:11:28]  replicas=None
[2025-05-09 12:11:28]  scope=mc23_13p6TeV
[2025-05-09 12:11:28]  status=None
[2025-05-09 12:11:28]  status_code=0
[2025-05-09 12:11:28]  storage_token=
[2025-05-09 12:11:28]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6638230946/log.44506063._052640.job.log.tgz.1
[2025-05-09 12:11:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/f6/log.44506063._052640.job.log.tgz.1
[2025-05-09 12:11:28]  workdir=None
[2025-05-09 12:11:28] ]
[2025-05-09 12:11:28] 2025-05-09 03:11:10,676 | INFO     | transferring file log.44506063._052640.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6638230946/log.44506063._052640.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-09 12:11:28] 2025-05-09 03:11:10,676 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6638230946/log.44506063._052640.job.log.tgz.1 /var/lib/boinc/slots/1/log.44506063._052640.job
[2025-05-09 12:11:28] 2025-05-09 03:11:10,682 | INFO     | adding to output.list: log.44506063._052640.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/f6/log.44506063._052640.job.log.tg
[2025-05-09 12:11:28] 2025-05-09 03:11:10,683 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-09 12:11:28] 2025-05-09 03:11:10,683 | INFO     | summary of transferred files:
[2025-05-09 12:11:28] 2025-05-09 03:11:10,683 | INFO     |  -- lfn=log.44506063._052640.job.log.tgz.1, status_code=0, status=transferred
[2025-05-09 12:11:28] 2025-05-09 03:11:10,683 | INFO     | stage-out finished correctly
[2025-05-09 12:11:28] 2025-05-09 03:11:11,044 | INFO     | monitor loop #345: job 0:6638230946 is in state 'finished'
[2025-05-09 12:11:28] 2025-05-09 03:11:11,044 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-09 12:11:28] 2025-05-09 03:11:11,210 | INFO     | PID=2152474 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-09 12:11:28] 2025-05-09 03:11:11,211 | INFO     | .. there are 3 such processes running
[2025-05-09 12:11:28] 2025-05-09 03:11:12,739 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-09 12:11:28] 2025-05-09 03:11:13,133 | INFO     | job 6638230946 has state=finished
[2025-05-09 12:11:28] 2025-05-09 03:11:13,133 | INFO     | preparing for final server update for job 6638230946 in state='finished'
[2025-05-09 12:11:28] 2025-05-09 03:11:13,133 | INFO     | this job has now completed (state=finished)
[2025-05-09 12:11:28] 2025-05-09 03:11:13,133 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-09 12:11:28] 2025-05-09 03:11:13,134 | INFO     | log transfer has been attempted: DONE
[2025-05-09 12:11:28] 2025-05-09 03:11:13,134 | INFO     | job 6638230946 has finished - writing final server update
[2025-05-09 12:11:28] 2025-05-09 03:11:13,134 | INFO     | total number of processed events: 400 (read)
[2025-05-09 12:11:28] 2025-05-09 03:11:13,135 | INFO     | executing command: lscpu
[2025-05-09 12:11:28] 2025-05-09 03:11:13,146 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-09 12:11:28] 2025-05-09 03:11:13,546 | INFO     | monitor loop #346: job 0:6638230946 is in state 'finished'
[2025-05-09 12:11:28] 2025-05-09 03:11:13,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-09 12:11:28] 2025-05-09 03:11:14,256 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-09 12:11:28] 2025-05-09 03:11:14,256 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6638230946/memory_monitor_summary.json (trf name=prmon)
[2025-05-09 12:11:28] 2025-05-09 03:11:14,256 | INFO     | extracted standard info from prmon json
[2025-05-09 12:11:28] 2025-05-09 03:11:14,256 | INFO     | extracted standard memory fields from prmon json
[2025-05-09 12:11:28] 2025-05-09 03:11:14,256 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | INFO     | fitting pss+swap vs Time
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | INFO     | sum of square deviations: 106336877.5
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | INFO     | sum of deviations: 20459714302.499996
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | INFO     | mean x: 1746758017.5
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | INFO     | mean y: 2308404.157142857
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | INFO     | -- intersect: -336082132232.64154
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | INFO     | intersect: -336082132232.64154
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | INFO     | chi2: 2.2155667151704312
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | INFO     | -- intersect: -336082132232.64154
[2025-05-09 12:11:28] 2025-05-09 03:11:14,257 | INFO     | current memory leak: 192.40 B/s (using 70 data points, chi2=2.22)
[2025-05-09 12:11:28] 2025-05-09 03:11:14,258 | INFO     | ..............................
[2025-05-09 12:11:28] 2025-05-09 03:11:14,258 | INFO     | . Timing measurements:
[2025-05-09 12:11:28] 2025-05-09 03:11:14,258 | INFO     | . get job = 0 s
[2025-05-09 12:11:28] 2025-05-09 03:11:14,258 | INFO     | . initial setup = 4 s
[2025-05-09 12:11:28] 2025-05-09 03:11:14,258 | INFO     | . payload setup = 1 s
[2025-05-09 12:11:28] 2025-05-09 03:11:14,258 | INFO     | . stage-in = 0 s
[2025-05-09 12:11:28] 2025-05-09 03:11:14,258 | INFO     | . payload execution = 4659 s
[2025-05-09 12:11:28] 2025-05-09 03:11:14,258 | INFO     | . stage-out = 0 s
[2025-05-09 12:11:28] 2025-05-09 03:11:14,258 | INFO     | . log creation = 0 s
[2025-05-09 12:11:28] 2025-05-09 03:11:14,258 | INFO     | ..............................
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | 
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | job summary report
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | --------------------------------------------------
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | PanDA job id: 6638230946
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | task id: 44506063
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | errors: (none)
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | pilot state: finished 
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | transexitcode: 0
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | exeerrorcode: 0
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | exeerrordiag: 
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | exitcode: 0
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | exitmsg: OK
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | cpuconsumptiontime: 22414 s
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | nevents: 400
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | neventsw: 0
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | pid: 2159061
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | pgrp: 2159061
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | corecount: 6
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | event service: False
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | sizes: {0: 2393738, 1: 2393944, 11: 2393972, 4664: 2420066, 4666: 2429007, 4668: 2429063, 4669: 2429361}
[2025-05-09 12:11:28] 2025-05-09 03:11:14,619 | INFO     | --------------------------------------------------
[2025-05-09 12:11:28] 2025-05-09 03:11:14,620 | INFO     | 
[2025-05-09 12:11:28] 2025-05-09 03:11:14,620 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | job 6638230946 has completed (purged errors)
[2025-05-09 12:11:28] 2025-05-09 03:11:14,628 | INFO     | overall cleanup function is called
[2025-05-09 12:11:28] 2025-05-09 03:11:15,634 | INFO     | --- collectZombieJob: --- 10, [2159061]
[2025-05-09 12:11:28] 2025-05-09 03:11:15,634 | INFO     | zombie collector waiting for pid 2159061
[2025-05-09 12:11:28] 2025-05-09 03:11:15,634 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-09 12:11:28] 2025-05-09 03:11:15,634 | INFO     | collected zombie processes
[2025-05-09 12:11:28] 2025-05-09 03:11:15,634 | INFO     | will attempt to kill all subprocesses of pid=2159061
[2025-05-09 12:11:28] 2025-05-09 03:11:15,655 | INFO     | process IDs to be killed: [2159061] (in reverse order)
[2025-05-09 12:11:28] 2025-05-09 03:11:15,671 | WARNING  | found no corresponding commands to process id(s)
[2025-05-09 12:11:28] 2025-05-09 03:11:15,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-09 12:11:28] 2025-05-09 03:11:15,672 | INFO     | did not find any defunct processes belonging to 2159061
[2025-05-09 12:11:28] 2025-05-09 03:11:15,673 | INFO     | did not find any defunct processes belonging to 2159061
[2025-05-09 12:11:28] 2025-05-09 03:11:15,673 | INFO     | ready for new job
[2025-05-09 12:11:28] 2025-05-09 03:11:15,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-09 12:11:28] 2025-05-09 03:11:15,673 | INFO     | **************************************
[2025-05-09 12:11:28] 2025-05-09 03:11:15,673 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-09 12:11:28] 2025-05-09 03:11:15,673 | INFO     | **************************************
[2025-05-09 12:11:28] 2025-05-09 03:11:15,674 | INFO     | 
[2025-05-09 12:11:28] 2025-05-09 03:11:15,674 | INFO     | architecture information:
[2025-05-09 12:11:28] 2025-05-09 03:11:15,674 | INFO     | executing command: cat /etc/os-release
[2025-05-09 12:11:28] 2025-05-09 03:11:15,679 | INFO     | cat /etc/os-release:
[2025-05-09 12:11:28] NAME="CentOS Linux"
[2025-05-09 12:11:28] VERSION="7 (Core)"
[2025-05-09 12:11:28] ID="centos"
[2025-05-09 12:11:28] ID_LIKE="rhel fedora"
[2025-05-09 12:11:28] VERSION_ID="7"
[2025-05-09 12:11:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-09 12:11:28] ANSI_COLOR="0;31"
[2025-05-09 12:11:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-09 12:11:28] HOME_URL="https://www.centos.org/"
[2025-05-09 12:11:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-09 12:11:28] 
[2025-05-09 12:11:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-09 12:11:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-09 12:11:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-09 12:11:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-09 12:11:28] 
[2025-05-09 12:11:28] 2025-05-09 03:11:15,679 | INFO     | **************************************
[2025-05-09 12:11:28] 2025-05-09 03:11:16,182 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-05-09 12:11:28] 2025-05-09 03:11:16,188 | INFO     | sufficient remaining disk space (278056140800 B)
[2025-05-09 12:11:28] 2025-05-09 03:11:16,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-09 12:11:28] 2025-05-09 03:11:16,188 | INFO     | current server update state: UPDATING_FINAL
[2025-05-09 12:11:28] 2025-05-09 03:11:16,188 | INFO     | update_server=False
[2025-05-09 12:11:28] 2025-05-09 03:11:16,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-09 12:11:28] 2025-05-09 03:11:16,188 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-09 12:11:28] 2025-05-09 03:11:16,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-09 12:11:28] 2025-05-09 03:11:16,188 | INFO     | found 0 job(s) in 20 queues
[2025-05-09 12:11:28] 2025-05-09 03:11:16,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-09 12:11:28] 2025-05-09 03:11:16,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-09 12:11:28] 2025-05-09 03:11:16,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-09 12:11:28] 2025-05-09 03:11:16,579 | INFO     | all data control threads have been joined
[2025-05-09 12:11:28] 2025-05-09 03:11:16,978 | INFO     | all payload control threads have been joined
[2025-05-09 12:11:28] 2025-05-09 03:11:17,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-09 12:11:28] 2025-05-09 03:11:17,053 | INFO     | aborting loop
[2025-05-09 12:11:28] 2025-05-09 03:11:17,193 | INFO     | [job] retrieve thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:17,193 | INFO     | [job] queue monitor thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:17,440 | INFO     | all job control threads have been joined
[2025-05-09 12:11:28] 2025-05-09 03:11:17,584 | INFO     | [data] control thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:17,652 | INFO     | [payload] execute_payloads thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:17,984 | INFO     | [payload] control thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:17,986 | INFO     | [data] copytool_in thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:18,058 | INFO     | [job] job monitor thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:18,181 | INFO     | [payload] validate_post thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:18,218 | INFO     | [data] copytool_out thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:18,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:18,445 | INFO     | [job] control thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:18,481 | INFO     | [job] create_data_payload thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:18,553 | INFO     | [payload] failed_post thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:18,570 | INFO     | [payload] validate_pre thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:18,622 | INFO     | [job] validate thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:18,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-09 12:11:28] 2025-05-09 03:11:22,777 | INFO     | [data] queue_monitor thread has finished
[2025-05-09 12:11:28] 2025-05-09 03:11:23,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336521344832)>', '<ExcThread(monitor, started 140335900518144)>']
[2025-05-09 12:11:28] 2025-05-09 03:11:23,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-09 12:11:28] 2025-05-09 03:11:23,222 | INFO     | [monitor] control thread has ended
[2025-05-09 12:11:28] 2025-05-09 03:11:28,092 | INFO     | all workflow threads have been joined
[2025-05-09 12:11:28] 2025-05-09 03:11:28,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-09 12:11:28] 2025-05-09 03:11:28,092 | INFO     | traces error code: 0
[2025-05-09 12:11:28] 2025-05-09 03:11:28,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-09 12:11:28] 2025-05-09 03:11:28,126 [wrapper] ==== pilot stdout END ====
[2025-05-09 12:11:28] 2025-05-09 03:11:28,127 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-09 12:11:28] 2025-05-09 03:11:28,128 [wrapper] pilotpid: 2152474
[2025-05-09 12:11:28] 2025-05-09 03:11:28,129 [wrapper] Pilot exit status: 0
[2025-05-09 12:11:28] 2025-05-09 03:11:28,132 [wrapper] pandaids: 6638230946
[2025-05-09 12:11:28] 2025-05-09 03:11:28,141 [wrapper] cleanup supervisor_pilot 2218453 2152475
[2025-05-09 12:11:28] 2025-05-09 03:11:28,141 [wrapper] Test setup, not cleaning
[2025-05-09 12:11:28] 2025-05-09 03:11:28,142 [wrapper] apfmon messages muted
[2025-05-09 12:11:28] 2025-05-09 03:11:28,143 [wrapper] ==== wrapper stdout END ====
[2025-05-09 12:11:28] 2025-05-09 03:11:28,143 [wrapper] ==== wrapper stderr END ====
[2025-05-09 12:11:28]  *** Error codes and diagnostics ***
[2025-05-09 12:11:28]     "exeErrorCode": 0,
[2025-05-09 12:11:28]     "exeErrorDiag": "",
[2025-05-09 12:11:28]     "pilotErrorCode": 0,
[2025-05-09 12:11:28]     "pilotErrorDiag": "",
[2025-05-09 12:11:28]  *** Listing of results directory ***
[2025-05-09 12:11:28] total 413276
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc    495897 May  8 19:14 pilot3.tar.gz
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc      5111 May  8 19:22 queuedata.json
[2025-05-09 12:11:28] -rwx------. 1 boinc boinc     37140 May  8 19:23 runpilot2-wrapper.sh
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc       100 May  9 10:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-09 12:11:28] -rwxr-xr-x. 1 boinc boinc      7986 May  9 10:52 run_atlas
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc       105 May  9 10:52 job.xml
[2025-05-09 12:11:28] -rw-r--r--. 2 boinc boinc     17569 May  9 10:52 start_atlas.sh
[2025-05-09 12:11:28] drwxrwx--x. 2 boinc boinc        68 May  9 10:52 shared
[2025-05-09 12:11:28] -rw-r--r--. 2 boinc boinc    508882 May  9 10:52 input.tar.gz
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc      9509 May  9 10:52 init_data.xml
[2025-05-09 12:11:28] -rw-r--r--. 2 boinc boinc 222488314 May  9 10:52 EVNT.44506061._001924.pool.root.1
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc         0 May  9 10:52 boinc_lockfile
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc      2557 May  9 10:52 pandaJob.out
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc       424 May  9 10:52 setup.sh.local
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc    997945 May  9 10:53 agis_schedconf.cvmfs.json
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc   1596741 May  9 10:53 agis_ddmendpoints.agis.ALL.json
[2025-05-09 12:11:28] drwx------. 4 boinc boinc      4096 May  9 10:53 pilot3
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc        95 May  9 12:10 pilot_heartbeat.json
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc 195350132 May  9 12:10 HITS.44506063._052640.pool.root.1
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc        27 May  9 12:11 wrapper_checkpoint.txt
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc      8192 May  9 12:11 boinc_mmap_file
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc       529 May  9 12:11 boinc_task_state.xml
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc      1014 May  9 12:11 memory_monitor_summary.json
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc    275681 May  9 12:11 log.44506063._052640.job.log.tgz.1
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc      7661 May  9 12:11 heartbeat.json
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc      4477 May  9 12:11 pilotlog.txt
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc    483456 May  9 12:11 log.44506063._052640.job.log.1
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc       357 May  9 12:11 output.list
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc       620 May  9 12:11 runtime_log
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc    778240 May  9 12:11 result.tar.gz
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc     10971 May  9 12:11 runtime_log.err
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc       642 May  9 12:11 qiQMDmGaDX7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm738LDmjjMuPm.diag
[2025-05-09 12:11:28] -rw-r--r--. 1 boinc boinc     21077 May  9 12:11 stderr.txt
[2025-05-09 12:11:28] HITS file was successfully produced:
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc 195350132 May  9 12:10 shared/HITS.pool.root.1
[2025-05-09 12:11:28]  *** Contents of shared directory: ***
[2025-05-09 12:11:28] total 409328
[2025-05-09 12:11:28] -rw-r--r--. 2 boinc boinc     17569 May  9 10:52 start_atlas.sh
[2025-05-09 12:11:28] -rw-r--r--. 2 boinc boinc    508882 May  9 10:52 input.tar.gz
[2025-05-09 12:11:28] -rw-r--r--. 2 boinc boinc 222488314 May  9 10:52 ATLAS.root_0
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc 195350132 May  9 12:10 HITS.pool.root.1
[2025-05-09 12:11:28] -rw-------. 1 boinc boinc    778240 May  9 12:11 result.tar.gz
12:11:29 (2148431): run_atlas exited; CPU time 22443.964431
12:11:29 (2148431): called boinc_finish(0)

</stderr_txt>
]]>

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