Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:28:58 (409152): wrapper (7.7.26015): starting
11:28:58 (409152): wrapper: running run_atlas (--nthreads 4)
[2025-05-09 11:28:58] Arguments: --nthreads 4
[2025-05-09 11:28:58] Threads: 4
[2025-05-09 11:28:58] Checking for CVMFS
[2025-05-09 11:28:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-09 11:28:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-09 11:28:59] Running cvmfs_config stat atlas.cern.ch
[2025-05-09 11:28:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-09 11:28:59] 2.9.2.0 3057 1368 85756 145789 2 55 5627072 36864001 0 130560 0 1032721 99.991 432726 6770 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-09 11:28:59] CVMFS is ok
[2025-05-09 11:28:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-09 11:28:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-09 11:28:59] Further information can be found at the LHC@home message board.
[2025-05-09 11:28:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-09 11:28:59] Checking for apptainer binary...
[2025-05-09 11:28:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-09 11:28:59] Running /usr/bin/apptainer --version
[2025-05-09 11:28:59] apptainer version 1.3.6-6.1
[2025-05-09 11:28:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-09 11:28:59] magicA250
[2025-05-09 11:28:59] apptainer works
[2025-05-09 11:28:59] Set ATHENA_PROC_NUMBER=4
[2025-05-09 11:28:59] Set ATHENA_CORE_NUMBER=4
[2025-05-09 11:28:59] Starting ATLAS job with PandaID=6638317647
[2025-05-09 11:28:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-09 12:55:08]  *** The last 200 lines of the pilot log: ***
[2025-05-09 12:55:08]  is_tar=False
[2025-05-09 12:55:08]  lfn=log.44506063._054858.job.log.tgz.1
[2025-05-09 12:55:08]  mtime=0
[2025-05-09 12:55:08]  protocol_id=None
[2025-05-09 12:55:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-09 12:55:08]  replicas=None
[2025-05-09 12:55:08]  scope=mc23_13p6TeV
[2025-05-09 12:55:08]  status=None
[2025-05-09 12:55:08]  status_code=0
[2025-05-09 12:55:08]  storage_token=
[2025-05-09 12:55:08]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6638317647/log.44506063._054858.job.log.tgz.1
[2025-05-09 12:55:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/0e/log.44506063._054858.job.log.tgz.1
[2025-05-09 12:55:08]  workdir=None
[2025-05-09 12:55:08] ]
[2025-05-09 12:55:08] 2025-05-09 10:54:39,842 | INFO     | transferring file log.44506063._054858.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6638317647/log.44506063._054858.job.log.tgz.1 to /local/data/boinc/
[2025-05-09 12:55:08] 2025-05-09 10:54:39,842 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6638317647/log.44506063._054858.job.log.tgz.1 /local/data/boinc/slots/0/log.44506063._0548
[2025-05-09 12:55:08] 2025-05-09 10:54:39,861 | INFO     | adding to output.list: log.44506063._054858.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/0e/log.44506063._054858.job.log.tg
[2025-05-09 12:55:08] 2025-05-09 10:54:39,862 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-09 12:55:08] 2025-05-09 10:54:39,862 | INFO     | summary of transferred files:
[2025-05-09 12:55:08] 2025-05-09 10:54:39,862 | INFO     |  -- lfn=log.44506063._054858.job.log.tgz.1, status_code=0, status=transferred
[2025-05-09 12:55:08] 2025-05-09 10:54:39,862 | INFO     | stage-out finished correctly
[2025-05-09 12:55:08] 2025-05-09 10:54:42,785 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-09 12:55:08] 2025-05-09 10:54:44,166 | INFO     | job 6638317647 has state=finished
[2025-05-09 12:55:08] 2025-05-09 10:54:44,166 | INFO     | preparing for final server update for job 6638317647 in state='finished'
[2025-05-09 12:55:08] 2025-05-09 10:54:44,166 | INFO     | this job has now completed (state=finished)
[2025-05-09 12:55:08] 2025-05-09 10:54:44,166 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-09 12:55:08] 2025-05-09 10:54:44,166 | INFO     | log transfer has been attempted: DONE
[2025-05-09 12:55:08] 2025-05-09 10:54:44,166 | INFO     | job 6638317647 has finished - writing final server update
[2025-05-09 12:55:08] 2025-05-09 10:54:44,167 | INFO     | total number of processed events: 400 (read)
[2025-05-09 12:55:08] 2025-05-09 10:54:44,168 | INFO     | executing command: lscpu
[2025-05-09 12:55:08] 2025-05-09 10:54:44,190 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-09 12:55:08] 2025-05-09 10:54:46,361 | WARNING  | process 419447 can no longer be monitored (due to stat problems) - aborting
[2025-05-09 12:55:08] 2025-05-09 10:54:46,361 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6638317647/memory_monitor_summary.json (trf name=prmon)
[2025-05-09 12:55:08] 2025-05-09 10:54:46,422 | INFO     | number of running child processes to parent process 419447: 1
[2025-05-09 12:55:08] 2025-05-09 10:54:46,422 | INFO     | maximum number of monitored processes: 6
[2025-05-09 12:55:08] 2025-05-09 10:54:48,926 | INFO     | monitor loop #395: job 0:6638317647 is in state 'finished'
[2025-05-09 12:55:08] 2025-05-09 10:54:48,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-09 12:55:08] 2025-05-09 10:54:49,074 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-09 12:55:08] 2025-05-09 10:54:49,074 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6638317647/memory_monitor_summary.json (trf name=prmon)
[2025-05-09 12:55:08] 2025-05-09 10:54:49,074 | INFO     | extracted standard info from prmon json
[2025-05-09 12:55:08] 2025-05-09 10:54:49,074 | INFO     | extracted standard memory fields from prmon json
[2025-05-09 12:55:08] 2025-05-09 10:54:49,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-09 12:55:08] 2025-05-09 10:54:49,075 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-09 12:55:08] 2025-05-09 10:54:49,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-09 12:55:08] 2025-05-09 10:54:49,076 | INFO     | fitting pss+swap vs Time
[2025-05-09 12:55:08] 2025-05-09 10:54:49,076 | INFO     | sum of square deviations: 141539398.0
[2025-05-09 12:55:08] 2025-05-09 10:54:49,076 | INFO     | sum of deviations: 2548305378.000002
[2025-05-09 12:55:08] 2025-05-09 10:54:49,076 | INFO     | mean x: 1746785593.0
[2025-05-09 12:55:08] 2025-05-09 10:54:49,076 | INFO     | mean y: 2435039.272727273
[2025-05-09 12:55:08] 2025-05-09 10:54:49,076 | INFO     | -- intersect: -31447063713.398403
[2025-05-09 12:55:08] 2025-05-09 10:54:49,076 | INFO     | intersect: -31447063713.398403
[2025-05-09 12:55:08] 2025-05-09 10:54:49,076 | INFO     | chi2: 1.1057973283541496
[2025-05-09 12:55:08] 2025-05-09 10:54:49,076 | INFO     | -- intersect: -31447063713.398403
[2025-05-09 12:55:08] 2025-05-09 10:54:49,076 | INFO     | current memory leak: 18.00 B/s (using 77 data points, chi2=1.11)
[2025-05-09 12:55:08] 2025-05-09 10:54:49,077 | INFO     | ..............................
[2025-05-09 12:55:08] 2025-05-09 10:54:49,077 | INFO     | . Timing measurements:
[2025-05-09 12:55:08] 2025-05-09 10:54:49,077 | INFO     | . get job = 0 s
[2025-05-09 12:55:08] 2025-05-09 10:54:49,077 | INFO     | . initial setup = 1 s
[2025-05-09 12:55:08] 2025-05-09 10:54:49,077 | INFO     | . payload setup = 4 s
[2025-05-09 12:55:08] 2025-05-09 10:54:49,077 | INFO     | . stage-in = 0 s
[2025-05-09 12:55:08] 2025-05-09 10:54:49,077 | INFO     | . payload execution = 5110 s
[2025-05-09 12:55:08] 2025-05-09 10:54:49,077 | INFO     | . stage-out = 0 s
[2025-05-09 12:55:08] 2025-05-09 10:54:49,077 | INFO     | . log creation = 0 s
[2025-05-09 12:55:08] 2025-05-09 10:54:49,077 | INFO     | ..............................
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | 
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | job summary report
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | --------------------------------------------------
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | PanDA job id: 6638317647
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | task id: 44506063
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | errors: (none)
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | pilot state: finished 
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | transexitcode: 0
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | exeerrorcode: 0
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | exeerrordiag: 
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | exitcode: 0
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | exitmsg: OK
[2025-05-09 12:55:08] 2025-05-09 10:54:49,319 | INFO     | cpuconsumptiontime: 17910 s
[2025-05-09 12:55:08] 2025-05-09 10:54:49,320 | INFO     | nevents: 400
[2025-05-09 12:55:08] 2025-05-09 10:54:49,320 | INFO     | neventsw: 0
[2025-05-09 12:55:08] 2025-05-09 10:54:49,320 | INFO     | pid: 419447
[2025-05-09 12:55:08] 2025-05-09 10:54:49,320 | INFO     | pgrp: 419447
[2025-05-09 12:55:08] 2025-05-09 10:54:49,320 | INFO     | corecount: 4
[2025-05-09 12:55:08] 2025-05-09 10:54:49,320 | INFO     | event service: False
[2025-05-09 12:55:08] 2025-05-09 10:54:49,320 | INFO     | sizes: {0: 2393742, 4: 2393948, 11: 2393976, 5118: 2420444, 5119: 2429391, 5122: 2429447, 5128: 2429745}
[2025-05-09 12:55:08] 2025-05-09 10:54:49,320 | INFO     | --------------------------------------------------
[2025-05-09 12:55:08] 2025-05-09 10:54:49,320 | INFO     | 
[2025-05-09 12:55:08] 2025-05-09 10:54:49,320 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-09 12:55:08] 2025-05-09 10:54:49,342 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | job 6638317647 has completed (purged errors)
[2025-05-09 12:55:08] 2025-05-09 10:54:49,343 | INFO     | overall cleanup function is called
[2025-05-09 12:55:08] 2025-05-09 10:54:50,350 | INFO     | --- collectZombieJob: --- 10, [419447]
[2025-05-09 12:55:08] 2025-05-09 10:54:50,350 | INFO     | zombie collector waiting for pid 419447
[2025-05-09 12:55:08] 2025-05-09 10:54:50,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-09 12:55:08] 2025-05-09 10:54:50,351 | INFO     | collected zombie processes
[2025-05-09 12:55:08] 2025-05-09 10:54:50,351 | INFO     | will attempt to kill all subprocesses of pid=419447
[2025-05-09 12:55:08] 2025-05-09 10:54:50,396 | INFO     | process IDs to be killed: [419447] (in reverse order)
[2025-05-09 12:55:08] 2025-05-09 10:54:50,431 | WARNING  | found no corresponding commands to process id(s)
[2025-05-09 12:55:08] 2025-05-09 10:54:50,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-09 12:55:08] 2025-05-09 10:54:50,433 | INFO     | did not find any defunct processes belonging to 419447
[2025-05-09 12:55:08] 2025-05-09 10:54:50,434 | INFO     | did not find any defunct processes belonging to 419447
[2025-05-09 12:55:08] 2025-05-09 10:54:50,434 | INFO     | ready for new job
[2025-05-09 12:55:08] 2025-05-09 10:54:50,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-09 12:55:08] 2025-05-09 10:54:50,435 | INFO     | **************************************
[2025-05-09 12:55:08] 2025-05-09 10:54:50,435 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-09 12:55:08] 2025-05-09 10:54:50,435 | INFO     | **************************************
[2025-05-09 12:55:08] 2025-05-09 10:54:50,435 | INFO     | 
[2025-05-09 12:55:08] 2025-05-09 10:54:50,436 | INFO     | architecture information:
[2025-05-09 12:55:08] 2025-05-09 10:54:50,436 | INFO     | executing command: cat /etc/os-release
[2025-05-09 12:55:08] 2025-05-09 10:54:50,450 | INFO     | cat /etc/os-release:
[2025-05-09 12:55:08] NAME="CentOS Linux"
[2025-05-09 12:55:08] VERSION="7 (Core)"
[2025-05-09 12:55:08] ID="centos"
[2025-05-09 12:55:08] ID_LIKE="rhel fedora"
[2025-05-09 12:55:08] VERSION_ID="7"
[2025-05-09 12:55:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-09 12:55:08] ANSI_COLOR="0;31"
[2025-05-09 12:55:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-09 12:55:08] HOME_URL="https://www.centos.org/"
[2025-05-09 12:55:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-09 12:55:08] 
[2025-05-09 12:55:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-09 12:55:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-09 12:55:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-09 12:55:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-09 12:55:08] 
[2025-05-09 12:55:08] 2025-05-09 10:54:50,451 | INFO     | **************************************
[2025-05-09 12:55:08] 2025-05-09 10:54:50,954 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-09 12:55:08] 2025-05-09 10:54:50,973 | INFO     | sufficient remaining disk space (356547297280 B)
[2025-05-09 12:55:08] 2025-05-09 10:54:50,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-09 12:55:08] 2025-05-09 10:54:50,973 | INFO     | current server update state: UPDATING_FINAL
[2025-05-09 12:55:08] 2025-05-09 10:54:50,973 | INFO     | update_server=False
[2025-05-09 12:55:08] 2025-05-09 10:54:50,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-09 12:55:08] 2025-05-09 10:54:50,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-09 12:55:08] 2025-05-09 10:54:50,973 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-09 12:55:08] 2025-05-09 10:54:50,973 | INFO     | found 0 job(s) in 20 queues
[2025-05-09 12:55:08] 2025-05-09 10:54:50,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-09 12:55:08] 2025-05-09 10:54:50,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-09 12:55:08] 2025-05-09 10:54:50,974 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-09 12:55:08] 2025-05-09 10:54:51,430 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-09 12:55:08] 2025-05-09 10:54:51,430 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-09 12:55:08] 2025-05-09 10:54:51,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-09 12:55:08] 2025-05-09 10:54:51,431 | INFO     | will abort loop
[2025-05-09 12:55:08] 2025-05-09 10:54:51,753 | INFO     | all job control threads have been joined
[2025-05-09 12:55:08] 2025-05-09 10:54:51,893 | INFO     | all data control threads have been joined
[2025-05-09 12:55:08] 2025-05-09 10:54:51,979 | INFO     | [job] retrieve thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:51,979 | INFO     | [job] queue monitor thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:52,322 | INFO     | [payload] validate_pre thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:52,436 | INFO     | [job] job monitor thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:52,443 | INFO     | all payload control threads have been joined
[2025-05-09 12:55:08] 2025-05-09 10:54:52,453 | INFO     | [payload] execute_payloads thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:52,638 | INFO     | [payload] failed_post thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:52,759 | INFO     | [job] control thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:52,897 | INFO     | [data] control thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:52,918 | INFO     | [data] copytool_in thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:52,980 | INFO     | [data] copytool_out thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:53,194 | INFO     | [job] validate thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:53,298 | INFO     | [payload] validate_post thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:53,324 | INFO     | [job] create_data_payload thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:53,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-09 12:55:08] 2025-05-09 10:54:53,449 | INFO     | [payload] control thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:54:57,344 | INFO     | [data] queue_monitor thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:55:01,330 | INFO     | job.realtimelogging is not enabled
[2025-05-09 12:55:08] 2025-05-09 10:55:02,335 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-09 12:55:08] 2025-05-09 10:55:02,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140239605487424)>', '<ExcThread(monitor, started 140238517163776)>']
[2025-05-09 12:55:08] 2025-05-09 10:55:03,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-09 12:55:08] 2025-05-09 10:55:03,031 | INFO     | [monitor] control thread has ended
[2025-05-09 12:55:08] 2025-05-09 10:55:07,960 | INFO     | all workflow threads have been joined
[2025-05-09 12:55:08] 2025-05-09 10:55:07,960 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-09 12:55:08] 2025-05-09 10:55:07,961 | INFO     | traces error code: 0
[2025-05-09 12:55:08] 2025-05-09 10:55:07,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-09 12:55:08] 2025-05-09 10:55:08,042 [wrapper] ==== pilot stdout END ====
[2025-05-09 12:55:08] 2025-05-09 10:55:08,046 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-09 12:55:08] 2025-05-09 10:55:08,050 [wrapper] pilotpid: 412876
[2025-05-09 12:55:08] 2025-05-09 10:55:08,055 [wrapper] Pilot exit status: 0
[2025-05-09 12:55:08] 2025-05-09 10:55:08,067 [wrapper] pandaids: 6638317647
[2025-05-09 12:55:08] 2025-05-09 10:55:08,089 [wrapper] cleanup supervisor_pilot  431903 412877
[2025-05-09 12:55:08] 2025-05-09 10:55:08,093 [wrapper] Test setup, not cleaning
[2025-05-09 12:55:08] 2025-05-09 10:55:08,098 [wrapper] apfmon messages muted
[2025-05-09 12:55:08] 2025-05-09 10:55:08,102 [wrapper] ==== wrapper stdout END ====
[2025-05-09 12:55:08] 2025-05-09 10:55:08,106 [wrapper] ==== wrapper stderr END ====
[2025-05-09 12:55:08]  *** Error codes and diagnostics ***
[2025-05-09 12:55:08]     "exeErrorCode": 0,
[2025-05-09 12:55:08]     "exeErrorDiag": "",
[2025-05-09 12:55:08]     "pilotErrorCode": 0,
[2025-05-09 12:55:08]     "pilotErrorDiag": "",
[2025-05-09 12:55:08]  *** Listing of results directory ***
[2025-05-09 12:55:08] total 418948
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc      5111 May  8 15:46 queuedata.json
[2025-05-09 12:55:08] -rwx------ 1 boinc boinc     37140 May  8 15:47 runpilot2-wrapper.sh
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc    495897 May  8 15:47 pilot3.tar.gz
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc       100 May  9 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-09 12:55:08] -rwxr-xr-x 1 boinc boinc      7986 May  9 11:28 run_atlas
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc       105 May  9 11:28 job.xml
[2025-05-09 12:55:08] -rw-r--r-- 2 boinc boinc 222593339 May  9 11:28 EVNT.44506061._002034.pool.root.1
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc      6858 May  9 11:28 init_data.xml
[2025-05-09 12:55:08] drwxrwx--x 2 boinc boinc      4096 May  9 11:28 shared
[2025-05-09 12:55:08] -rw-r--r-- 2 boinc boinc    508878 May  9 11:28 input.tar.gz
[2025-05-09 12:55:08] -rw-r--r-- 2 boinc boinc     17569 May  9 11:28 start_atlas.sh
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc         0 May  9 11:28 boinc_lockfile
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc      2558 May  9 11:28 pandaJob.out
[2025-05-09 12:55:08] -rw------- 1 boinc boinc       424 May  9 11:28 setup.sh.local
[2025-05-09 12:55:08] -rw------- 1 boinc boinc    997937 May  9 11:29 agis_schedconf.cvmfs.json
[2025-05-09 12:55:08] -rw------- 1 boinc boinc   1596741 May  9 11:29 agis_ddmendpoints.agis.ALL.json
[2025-05-09 12:55:08] drwx------ 4 boinc boinc      4096 May  9 11:29 pilot3
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc       529 May  9 12:54 boinc_task_state.xml
[2025-05-09 12:55:08] -rw------- 1 boinc boinc 201062900 May  9 12:54 HITS.44506063._054858.pool.root.1
[2025-05-09 12:55:08] -rw------- 1 boinc boinc        95 May  9 12:54 pilot_heartbeat.json
[2025-05-09 12:55:08] -rw------- 1 boinc boinc      1024 May  9 12:54 memory_monitor_summary.json
[2025-05-09 12:55:08] -rw------- 1 boinc boinc    249658 May  9 12:54 log.44506063._054858.job.log.tgz.1
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc      8192 May  9 12:54 boinc_mmap_file
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc        27 May  9 12:54 wrapper_checkpoint.txt
[2025-05-09 12:55:08] -rw------- 1 boinc boinc      7672 May  9 12:54 heartbeat.json
[2025-05-09 12:55:08] -rw------- 1 boinc boinc      4738 May  9 12:55 pilotlog.txt
[2025-05-09 12:55:08] -rw------- 1 boinc boinc    497551 May  9 12:55 log.44506063._054858.job.log.1
[2025-05-09 12:55:08] -rw------- 1 boinc boinc       357 May  9 12:55 output.list
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc       620 May  9 12:55 runtime_log
[2025-05-09 12:55:08] -rw------- 1 boinc boinc    768000 May  9 12:55 result.tar.gz
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc     11114 May  9 12:55 runtime_log.err
[2025-05-09 12:55:08] -rw------- 1 boinc boinc       661 May  9 12:55 czQLDmzlGX7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmxR9LDmAUyPzm.diag
[2025-05-09 12:55:08] -rw-r--r-- 1 boinc boinc     21455 May  9 12:55 stderr.txt
[2025-05-09 12:55:08] HITS file was successfully produced:
[2025-05-09 12:55:08] -rw------- 1 boinc boinc 201062900 May  9 12:54 shared/HITS.pool.root.1
[2025-05-09 12:55:08]  *** Contents of shared directory: ***
[2025-05-09 12:55:08] total 415012
[2025-05-09 12:55:08] -rw-r--r-- 2 boinc boinc 222593339 May  9 11:28 ATLAS.root_0
[2025-05-09 12:55:08] -rw-r--r-- 2 boinc boinc    508878 May  9 11:28 input.tar.gz
[2025-05-09 12:55:08] -rw-r--r-- 2 boinc boinc     17569 May  9 11:28 start_atlas.sh
[2025-05-09 12:55:08] -rw------- 1 boinc boinc 201062900 May  9 12:54 HITS.pool.root.1
[2025-05-09 12:55:08] -rw------- 1 boinc boinc    768000 May  9 12:55 result.tar.gz
12:55:10 (409152): run_atlas exited; CPU time 17924.848683
12:55:10 (409152): called boinc_finish(0)

</stderr_txt>
]]>

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