Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:41:08 (392108): wrapper (7.7.26015): starting
18:41:08 (392108): wrapper: running run_atlas (--nthreads 12)
[2025-05-09 18:41:08] Arguments: --nthreads 12
[2025-05-09 18:41:08] Threads: 12
[2025-05-09 18:41:08] Checking for CVMFS
[2025-05-09 18:41:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-09 18:41:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-09 18:41:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-09 18:41:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-09 18:41:08] 2.12.7.0 9003 33481 103580 145802 3 56 38605063 46080000 922 130560 0 47142690 99.996 6444614 29223 http://cvmfs-egi.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-05-09 18:41:08] CVMFS is ok
[2025-05-09 18:41:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-09 18:41:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-09 18:41:08] Further information can be found at the LHC@home message board.
[2025-05-09 18:41:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-09 18:41:08] Checking for apptainer binary...
[2025-05-09 18:41:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-09 18:41:08] Running /usr/bin/apptainer --version
[2025-05-09 18:41:08] apptainer version 1.4.0-1.el9
[2025-05-09 18:41:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-09 18:41:08] minis01.farm.particle.cz
[2025-05-09 18:41:08] apptainer works
[2025-05-09 18:41:08] Set ATHENA_PROC_NUMBER=12
[2025-05-09 18:41:08] Set ATHENA_CORE_NUMBER=12
[2025-05-09 18:41:08] Starting ATLAS job with PandaID=6638317312
[2025-05-09 18:41:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-09 19:43:38]  *** The last 200 lines of the pilot log: ***
[2025-05-09 19:43:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-09 19:43:38]  is_altstaged=None
[2025-05-09 19:43:38]  is_tar=False
[2025-05-09 19:43:38]  lfn=log.44506063._054788.job.log.tgz.1
[2025-05-09 19:43:38]  mtime=0
[2025-05-09 19:43:38]  protocol_id=None
[2025-05-09 19:43:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-09 19:43:38]  replicas=None
[2025-05-09 19:43:38]  scope=mc23_13p6TeV
[2025-05-09 19:43:38]  status=None
[2025-05-09 19:43:38]  status_code=0
[2025-05-09 19:43:38]  storage_token=
[2025-05-09 19:43:38]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6638317312/log.44506063._054788.job.log.tgz.1
[2025-05-09 19:43:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/87/log.44506063._054788.job.log.tgz.1
[2025-05-09 19:43:38]  workdir=None
[2025-05-09 19:43:38] ]
[2025-05-09 19:43:38] 2025-05-09 17:43:14,868 | INFO     | transferring file log.44506063._054788.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6638317312/log.44506063._054788.job.log.tgz.1 to /scratch/.boinc/slot
[2025-05-09 19:43:38] 2025-05-09 17:43:14,868 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6638317312/log.44506063._054788.job.log.tgz.1 /scratch/.boinc/slots/1/log.44506063._054788.j
[2025-05-09 19:43:38] 2025-05-09 17:43:14,884 | INFO     | adding to output.list: log.44506063._054788.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/87/log.44506063._054788.job.log.tg
[2025-05-09 19:43:38] 2025-05-09 17:43:14,885 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-09 19:43:38] 2025-05-09 17:43:14,885 | INFO     | summary of transferred files:
[2025-05-09 19:43:38] 2025-05-09 17:43:14,885 | INFO     |  -- lfn=log.44506063._054788.job.log.tgz.1, status_code=0, status=transferred
[2025-05-09 19:43:38] 2025-05-09 17:43:14,885 | INFO     | stage-out finished correctly
[2025-05-09 19:43:38] 2025-05-09 17:43:17,226 | WARNING  | process 402610 can no longer be monitored (due to stat problems) - aborting
[2025-05-09 19:43:38] 2025-05-09 17:43:17,226 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6638317312/memory_monitor_summary.json (trf name=prmon)
[2025-05-09 19:43:38] 2025-05-09 17:43:17,354 | INFO     | number of running child processes to parent process 402610: 1
[2025-05-09 19:43:38] 2025-05-09 17:43:17,354 | INFO     | maximum number of monitored processes: 6
[2025-05-09 19:43:38] 2025-05-09 17:43:18,264 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-09 19:43:38] 2025-05-09 17:43:19,857 | INFO     | monitor loop #282: job 0:6638317312 is in state 'finished'
[2025-05-09 19:43:38] 2025-05-09 17:43:19,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-09 19:43:38] 2025-05-09 17:43:20,197 | INFO     | job 6638317312 has state=finished
[2025-05-09 19:43:38] 2025-05-09 17:43:20,197 | INFO     | preparing for final server update for job 6638317312 in state='finished'
[2025-05-09 19:43:38] 2025-05-09 17:43:20,197 | INFO     | this job has now completed (state=finished)
[2025-05-09 19:43:38] 2025-05-09 17:43:20,197 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-09 19:43:38] 2025-05-09 17:43:20,197 | INFO     | log transfer has been attempted: DONE
[2025-05-09 19:43:38] 2025-05-09 17:43:20,197 | INFO     | job 6638317312 has finished - writing final server update
[2025-05-09 19:43:38] 2025-05-09 17:43:20,198 | INFO     | total number of processed events: 400 (read)
[2025-05-09 19:43:38] 2025-05-09 17:43:20,200 | INFO     | executing command: lscpu
[2025-05-09 19:43:38] 2025-05-09 17:43:20,232 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-09 19:43:38] 2025-05-09 17:43:22,360 | INFO     | monitor loop #283: job 0:6638317312 is in state 'finished'
[2025-05-09 19:43:38] 2025-05-09 17:43:22,360 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-09 19:43:38] 2025-05-09 17:43:23,638 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-09 19:43:38] 2025-05-09 17:43:23,638 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6638317312/memory_monitor_summary.json (trf name=prmon)
[2025-05-09 19:43:38] 2025-05-09 17:43:23,639 | INFO     | extracted standard info from prmon json
[2025-05-09 19:43:38] 2025-05-09 17:43:23,639 | INFO     | extracted standard memory fields from prmon json
[2025-05-09 19:43:38] 2025-05-09 17:43:23,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-09 19:43:38] 2025-05-09 17:43:23,639 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-09 19:43:38] 2025-05-09 17:43:23,639 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-09 19:43:38] 2025-05-09 17:43:23,640 | INFO     | fitting pss+swap vs Time
[2025-05-09 19:43:38] 2025-05-09 17:43:23,640 | INFO     | sum of square deviations: 48810217.5
[2025-05-09 19:43:38] 2025-05-09 17:43:23,641 | INFO     | sum of deviations: 8457097675.5
[2025-05-09 19:43:38] 2025-05-09 17:43:23,641 | INFO     | mean x: 1746810821.5
[2025-05-09 19:43:38] 2025-05-09 17:43:23,641 | INFO     | mean y: 2663023.611111111
[2025-05-09 19:43:38] 2025-05-09 17:43:23,641 | INFO     | -- intersect: -302658347205.3619
[2025-05-09 19:43:38] 2025-05-09 17:43:23,641 | INFO     | intersect: -302658347205.3619
[2025-05-09 19:43:38] 2025-05-09 17:43:23,641 | INFO     | chi2: 1.2876852582085634
[2025-05-09 19:43:38] 2025-05-09 17:43:23,641 | INFO     | -- intersect: -302658347205.3619
[2025-05-09 19:43:38] 2025-05-09 17:43:23,641 | INFO     | current memory leak: 173.26 B/s (using 54 data points, chi2=1.29)
[2025-05-09 19:43:38] 2025-05-09 17:43:23,641 | INFO     | ..............................
[2025-05-09 19:43:38] 2025-05-09 17:43:23,642 | INFO     | . Timing measurements:
[2025-05-09 19:43:38] 2025-05-09 17:43:23,642 | INFO     | . get job = 0 s
[2025-05-09 19:43:38] 2025-05-09 17:43:23,642 | INFO     | . initial setup = 1 s
[2025-05-09 19:43:38] 2025-05-09 17:43:23,642 | INFO     | . payload setup = 4 s
[2025-05-09 19:43:38] 2025-05-09 17:43:23,642 | INFO     | . stage-in = 0 s
[2025-05-09 19:43:38] 2025-05-09 17:43:23,642 | INFO     | . payload execution = 3693 s
[2025-05-09 19:43:38] 2025-05-09 17:43:23,642 | INFO     | . stage-out = 0 s
[2025-05-09 19:43:38] 2025-05-09 17:43:23,642 | INFO     | . log creation = 0 s
[2025-05-09 19:43:38] 2025-05-09 17:43:23,642 | INFO     | ..............................
[2025-05-09 19:43:38] 2025-05-09 17:43:23,717 | INFO     | 
[2025-05-09 19:43:38] 2025-05-09 17:43:23,717 | INFO     | job summary report
[2025-05-09 19:43:38] 2025-05-09 17:43:23,717 | INFO     | --------------------------------------------------
[2025-05-09 19:43:38] 2025-05-09 17:43:23,717 | INFO     | PanDA job id: 6638317312
[2025-05-09 19:43:38] 2025-05-09 17:43:23,717 | INFO     | task id: 44506063
[2025-05-09 19:43:38] 2025-05-09 17:43:23,717 | INFO     | errors: (none)
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | pilot state: finished 
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | transexitcode: 0
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | exeerrorcode: 0
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | exeerrordiag: 
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | exitcode: 0
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | exitmsg: OK
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | cpuconsumptiontime: 34310 s
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | nevents: 400
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | neventsw: 0
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | pid: 402610
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | pgrp: 402610
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | corecount: 12
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | event service: False
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | sizes: {0: 2393569, 1: 2393768, 4: 2393974, 11: 2394002, 3701: 2419699, 3702: 2419698, 3704: 2428825, 3707: 2428881, 3712: 2429051}
[2025-05-09 19:43:38] 2025-05-09 17:43:23,718 | INFO     | --------------------------------------------------
[2025-05-09 19:43:38] 2025-05-09 17:43:23,719 | INFO     | 
[2025-05-09 19:43:38] 2025-05-09 17:43:23,719 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-05-09 19:43:38] 2025-05-09 17:43:23,733 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,733 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,733 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,734 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,734 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,734 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,734 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,734 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,734 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,734 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,734 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,735 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-09 19:43:38] 2025-05-09 17:43:23,735 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,735 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-09 19:43:38] 2025-05-09 17:43:23,736 | INFO     | job 6638317312 has completed (purged errors)
[2025-05-09 19:43:38] 2025-05-09 17:43:23,736 | INFO     | overall cleanup function is called
[2025-05-09 19:43:38] 2025-05-09 17:43:24,745 | INFO     | --- collectZombieJob: --- 10, [402610]
[2025-05-09 19:43:38] 2025-05-09 17:43:24,745 | INFO     | zombie collector waiting for pid 402610
[2025-05-09 19:43:38] 2025-05-09 17:43:24,745 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-09 19:43:38] 2025-05-09 17:43:24,745 | INFO     | collected zombie processes
[2025-05-09 19:43:38] 2025-05-09 17:43:24,745 | INFO     | will attempt to kill all subprocesses of pid=402610
[2025-05-09 19:43:38] 2025-05-09 17:43:24,879 | INFO     | process IDs to be killed: [402610] (in reverse order)
[2025-05-09 19:43:38] 2025-05-09 17:43:24,927 | WARNING  | found no corresponding commands to process id(s)
[2025-05-09 19:43:38] 2025-05-09 17:43:24,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-09 19:43:38] 2025-05-09 17:43:24,932 | INFO     | did not find any defunct processes belonging to 402610
[2025-05-09 19:43:38] 2025-05-09 17:43:24,935 | INFO     | did not find any defunct processes belonging to 402610
[2025-05-09 19:43:38] 2025-05-09 17:43:24,935 | INFO     | ready for new job
[2025-05-09 19:43:38] 2025-05-09 17:43:24,935 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-09 19:43:38] 2025-05-09 17:43:24,936 | INFO     | **************************************
[2025-05-09 19:43:38] 2025-05-09 17:43:24,937 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-09 19:43:38] 2025-05-09 17:43:24,937 | INFO     | **************************************
[2025-05-09 19:43:38] 2025-05-09 17:43:24,937 | INFO     | 
[2025-05-09 19:43:38] 2025-05-09 17:43:24,938 | INFO     | architecture information:
[2025-05-09 19:43:38] 2025-05-09 17:43:24,938 | INFO     | executing command: cat /etc/os-release
[2025-05-09 19:43:38] 2025-05-09 17:43:24,951 | INFO     | cat /etc/os-release:
[2025-05-09 19:43:38] NAME="CentOS Linux"
[2025-05-09 19:43:38] VERSION="7 (Core)"
[2025-05-09 19:43:38] ID="centos"
[2025-05-09 19:43:38] ID_LIKE="rhel fedora"
[2025-05-09 19:43:38] VERSION_ID="7"
[2025-05-09 19:43:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-09 19:43:38] ANSI_COLOR="0;31"
[2025-05-09 19:43:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-09 19:43:38] HOME_URL="https://www.centos.org/"
[2025-05-09 19:43:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-09 19:43:38] 
[2025-05-09 19:43:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-09 19:43:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-09 19:43:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-09 19:43:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-09 19:43:38] 
[2025-05-09 19:43:38] 2025-05-09 17:43:24,951 | INFO     | **************************************
[2025-05-09 19:43:38] 2025-05-09 17:43:25,454 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-05-09 19:43:38] 2025-05-09 17:43:25,468 | INFO     | sufficient remaining disk space (710819184640 B)
[2025-05-09 19:43:38] 2025-05-09 17:43:25,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-09 19:43:38] 2025-05-09 17:43:25,468 | INFO     | current server update state: UPDATING_FINAL
[2025-05-09 19:43:38] 2025-05-09 17:43:25,468 | INFO     | update_server=False
[2025-05-09 19:43:38] 2025-05-09 17:43:25,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-09 19:43:38] 2025-05-09 17:43:25,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-09 19:43:38] 2025-05-09 17:43:25,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-09 19:43:38] 2025-05-09 17:43:25,867 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-09 19:43:38] 2025-05-09 17:43:25,868 | INFO     | aborting loop
[2025-05-09 19:43:38] 2025-05-09 17:43:25,909 | INFO     | all data control threads have been joined
[2025-05-09 19:43:38] 2025-05-09 17:43:26,143 | INFO     | found 0 job(s) in 20 queues
[2025-05-09 19:43:38] 2025-05-09 17:43:26,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-09 19:43:38] 2025-05-09 17:43:26,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-09 19:43:38] 2025-05-09 17:43:26,474 | INFO     | [job] retrieve thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:26,474 | INFO     | [job] queue monitor thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:26,810 | INFO     | [payload] validate_post thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:26,824 | INFO     | [data] copytool_in thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:26,830 | INFO     | all job control threads have been joined
[2025-05-09 19:43:38] 2025-05-09 17:43:26,873 | INFO     | [job] job monitor thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:26,911 | INFO     | [data] control thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:26,966 | INFO     | all payload control threads have been joined
[2025-05-09 19:43:38] 2025-05-09 17:43:27,213 | INFO     | [payload] execute_payloads thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:27,257 | INFO     | [job] validate thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:27,478 | INFO     | [data] copytool_out thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:27,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:27,737 | INFO     | [payload] failed_post thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:27,757 | INFO     | [job] create_data_payload thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:27,835 | INFO     | [job] control thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:27,873 | INFO     | [payload] validate_pre thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:27,972 | INFO     | [payload] control thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:28,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-09 19:43:38] 2025-05-09 17:43:32,848 | INFO     | [data] queue_monitor thread has finished
[2025-05-09 19:43:38] 2025-05-09 17:43:33,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554464872256)>', '<ExcThread(monitor, started 140553962362624)>']
[2025-05-09 19:43:38] 2025-05-09 17:43:33,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-09 19:43:38] 2025-05-09 17:43:33,178 | INFO     | [monitor] control thread has ended
[2025-05-09 19:43:38] 2025-05-09 17:43:38,039 | INFO     | all workflow threads have been joined
[2025-05-09 19:43:38] 2025-05-09 17:43:38,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-09 19:43:38] 2025-05-09 17:43:38,039 | INFO     | traces error code: 0
[2025-05-09 19:43:38] 2025-05-09 17:43:38,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-09 19:43:38] 2025-05-09 17:43:38,140 [wrapper] ==== pilot stdout END ====
[2025-05-09 19:43:38] 2025-05-09 17:43:38,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-09 19:43:38] 2025-05-09 17:43:38,145 [wrapper] pilotpid: 395893
[2025-05-09 19:43:38] 2025-05-09 17:43:38,148 [wrapper] Pilot exit status: 0
[2025-05-09 19:43:38] 2025-05-09 17:43:38,157 [wrapper] pandaids: 6638317312
[2025-05-09 19:43:38] 2025-05-09 17:43:38,189 [wrapper] cleanup supervisor_pilot  464282 395894
[2025-05-09 19:43:38] 2025-05-09 17:43:38,191 [wrapper] Test setup, not cleaning
[2025-05-09 19:43:38] 2025-05-09 17:43:38,194 [wrapper] apfmon messages muted
[2025-05-09 19:43:38] 2025-05-09 17:43:38,196 [wrapper] ==== wrapper stdout END ====
[2025-05-09 19:43:38] 2025-05-09 17:43:38,198 [wrapper] ==== wrapper stderr END ====
[2025-05-09 19:43:38]  *** Error codes and diagnostics ***
[2025-05-09 19:43:38]     "exeErrorCode": 0,
[2025-05-09 19:43:38]     "exeErrorDiag": "",
[2025-05-09 19:43:38]     "pilotErrorCode": 0,
[2025-05-09 19:43:38]     "pilotErrorDiag": "",
[2025-05-09 19:43:38]  *** Listing of results directory ***
[2025-05-09 19:43:38] total 418432
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc    495897 May  8 15:35 pilot3.tar.gz
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc      5111 May  8 15:38 queuedata.json
[2025-05-09 19:43:38] -rwx------ 1 boinc boinc     37140 May  8 15:39 runpilot2-wrapper.sh
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc       100 May  9 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-09 19:43:38] -rwxr-xr-x 1 boinc boinc      7986 May  9 18:41 run_atlas
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc       105 May  9 18:41 job.xml
[2025-05-09 19:43:38] -rw-r--r-- 2 boinc boinc 222823553 May  9 18:41 EVNT.44506061._002031.pool.root.1
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc      6523 May  9 18:41 init_data.xml
[2025-05-09 19:43:38] -rw-r--r-- 2 boinc boinc     17569 May  9 18:41 start_atlas.sh
[2025-05-09 19:43:38] drwxrwx--x 2 boinc boinc      4096 May  9 18:41 shared
[2025-05-09 19:43:38] -rw-r--r-- 2 boinc boinc    508885 May  9 18:41 input.tar.gz
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc         0 May  9 18:41 boinc_lockfile
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc      2558 May  9 18:41 pandaJob.out
[2025-05-09 19:43:38] -rw------- 1 boinc boinc       424 May  9 18:41 setup.sh.local
[2025-05-09 19:43:38] -rw------- 1 boinc boinc    996344 May  9 18:41 agis_schedconf.cvmfs.json
[2025-05-09 19:43:38] -rw------- 1 boinc boinc   1596741 May  9 18:41 agis_ddmendpoints.agis.ALL.json
[2025-05-09 19:43:38] drwx------ 4 boinc boinc      4096 May  9 18:41 pilot3
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc       529 May  9 19:42 boinc_task_state.xml
[2025-05-09 19:43:38] -rw------- 1 boinc boinc 200307930 May  9 19:42 HITS.44506063._054788.pool.root.1
[2025-05-09 19:43:38] -rw------- 1 boinc boinc        95 May  9 19:42 pilot_heartbeat.json
[2025-05-09 19:43:38] -rw------- 1 boinc boinc      1012 May  9 19:43 memory_monitor_summary.json
[2025-05-09 19:43:38] -rw------- 1 boinc boinc    362984 May  9 19:43 log.44506063._054788.job.log.tgz.1
[2025-05-09 19:43:38] -rw------- 1 boinc boinc      7685 May  9 19:43 heartbeat.json
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc        27 May  9 19:43 wrapper_checkpoint.txt
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc      8192 May  9 19:43 boinc_mmap_file
[2025-05-09 19:43:38] -rw------- 1 boinc boinc      4355 May  9 19:43 pilotlog.txt
[2025-05-09 19:43:38] -rw------- 1 boinc boinc    383484 May  9 19:43 log.44506063._054788.job.log.1
[2025-05-09 19:43:38] -rw------- 1 boinc boinc       357 May  9 19:43 output.list
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc       620 May  9 19:43 runtime_log
[2025-05-09 19:43:38] -rw------- 1 boinc boinc    768000 May  9 19:43 result.tar.gz
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc     11078 May  9 19:43 runtime_log.err
[2025-05-09 19:43:38] -rw------- 1 boinc boinc       661 May  9 19:43 4H4MDmzdGX7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmFR9LDmV3NRKm.diag
[2025-05-09 19:43:38] -rw-r--r-- 1 boinc boinc     21413 May  9 19:43 stderr.txt
[2025-05-09 19:43:38] HITS file was successfully produced:
[2025-05-09 19:43:38] -rw------- 1 boinc boinc 200307930 May  9 19:42 shared/HITS.pool.root.1
[2025-05-09 19:43:38]  *** Contents of shared directory: ***
[2025-05-09 19:43:38] total 414496
[2025-05-09 19:43:38] -rw-r--r-- 2 boinc boinc 222823553 May  9 18:41 ATLAS.root_0
[2025-05-09 19:43:38] -rw-r--r-- 2 boinc boinc     17569 May  9 18:41 start_atlas.sh
[2025-05-09 19:43:38] -rw-r--r-- 2 boinc boinc    508885 May  9 18:41 input.tar.gz
[2025-05-09 19:43:38] -rw------- 1 boinc boinc 200307930 May  9 19:42 HITS.pool.root.1
[2025-05-09 19:43:38] -rw------- 1 boinc boinc    768000 May  9 19:43 result.tar.gz
19:43:39 (392108): run_atlas exited; CPU time 34349.708647
19:43:39 (392108): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN