Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:36:17 (32660): wrapper (7.7.26015): starting
16:36:17 (32660): wrapper: running run_atlas (--nthreads 8)
[2025-05-09 16:36:17] Arguments: --nthreads 8
[2025-05-09 16:36:17] Threads: 8
[2025-05-09 16:36:17] Checking for CVMFS
[2025-05-09 16:36:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-09 16:36:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-09 16:36:18] Running cvmfs_config stat atlas.cern.ch
[2025-05-09 16:36:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-09 16:36:18] 2.11.2.0 12829 6203 86000 145799 2 52 18757124 25165824 890 130560 0 5366299 99.898 2442299 3182 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-09 16:36:18] CVMFS is ok
[2025-05-09 16:36:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-09 16:36:18] Checking for apptainer binary...
[2025-05-09 16:36:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-09 16:36:18] Running /usr/bin/apptainer --version
[2025-05-09 16:36:18] apptainer version 1.3.2-1.el7
[2025-05-09 16:36:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-09 16:36:19] cg-vwn500.simple-grid.lan
[2025-05-09 16:36:19] apptainer works
[2025-05-09 16:36:19] Set ATHENA_PROC_NUMBER=8
[2025-05-09 16:36:19] Set ATHENA_CORE_NUMBER=8
[2025-05-09 16:36:19] Starting ATLAS job with PandaID=6638758694
[2025-05-09 16:36:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-09 21:50:08]  *** The last 200 lines of the pilot log: ***
[2025-05-09 21:50:08] 2025-05-09 18:07:45,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-09 21:50:08] 2025-05-09 18:07:45,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-09 21:50:08] 2025-05-09 18:07:45,613 | INFO     | fitting pss+swap vs Time
[2025-05-09 21:50:08] 2025-05-09 18:07:45,614 | INFO     | sum of square deviations: 2710627567.5
[2025-05-09 21:50:08] 2025-05-09 18:07:45,615 | INFO     | sum of deviations: 52446635936.999985
[2025-05-09 21:50:08] 2025-05-09 18:07:45,616 | INFO     | mean x: 1746807677.5
[2025-05-09 21:50:08] 2025-05-09 18:07:45,616 | INFO     | mean y: 2450014.9514563107
[2025-05-09 21:50:08] 2025-05-09 18:07:45,616 | INFO     | -- intersect: -33795695998.259182
[2025-05-09 21:50:08] 2025-05-09 18:07:45,616 | INFO     | intersect: -33795695998.259182
[2025-05-09 21:50:08] 2025-05-09 18:07:45,616 | INFO     | chi2: 5.063369978686467
[2025-05-09 21:50:08] 2025-05-09 18:07:45,617 | INFO     | sum of square deviations: 2518000700.0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,618 | INFO     | sum of deviations: 64697245563.00001
[2025-05-09 21:50:08] 2025-05-09 18:07:45,618 | INFO     | mean x: 1746807525.0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,618 | INFO     | mean y: 2459502.407960199
[2025-05-09 21:50:08] 2025-05-09 18:07:45,619 | INFO     | -- intersect: -44879829607.44863
[2025-05-09 21:50:08] 2025-05-09 18:07:45,619 | INFO     | intersect: -44879829607.44863
[2025-05-09 21:50:08] 2025-05-09 18:07:45,619 | INFO     | chi2: 4.32908269616019
[2025-05-09 21:50:08] 2025-05-09 18:07:45,619 | INFO     | current chi2=4.32908269616019 (change=14.501948023098347 %)
[2025-05-09 21:50:08] 2025-05-09 18:07:45,619 | INFO     | right removable region: 200
[2025-05-09 21:50:08] 2025-05-09 18:07:45,620 | INFO     | sum of square deviations: 2518000700.0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,621 | INFO     | sum of deviations: 1566191226.0000038
[2025-05-09 21:50:08] 2025-05-09 18:07:45,621 | INFO     | mean x: 1746807830.0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,621 | INFO     | mean y: 2490167.766169154
[2025-05-09 21:50:08] 2025-05-09 18:07:45,621 | INFO     | -- intersect: -1084020688.586693
[2025-05-09 21:50:08] 2025-05-09 18:07:45,622 | INFO     | intersect: -1084020688.586693
[2025-05-09 21:50:08] 2025-05-09 18:07:45,622 | INFO     | chi2: 2.4696795581387274
[2025-05-09 21:50:08] 2025-05-09 18:07:45,622 | INFO     | current chi2=2.4696795581387274 (change=51.224588198482614 %)
[2025-05-09 21:50:08] 2025-05-09 18:07:45,628 | INFO     | sum of square deviations: 2334722845.0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,630 | INFO     | sum of deviations: -35830103079.0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,630 | INFO     | mean x: 1746807982.5
[2025-05-09 21:50:08] 2025-05-09 18:07:45,630 | INFO     | mean y: 2521286.1326530613
[2025-05-09 21:50:08] 2025-05-09 18:07:45,630 | INFO     | -- intersect: 26810118687.354393
[2025-05-09 21:50:08] 2025-05-09 18:07:45,630 | INFO     | intersect: 26810118687.354393
[2025-05-09 21:50:08] 2025-05-09 18:07:45,631 | INFO     | chi2: 1.1538072824397538
[2025-05-09 21:50:08] 2025-05-09 18:07:45,631 | INFO     | current chi2=1.1538072824397538 (change=53.28109354764551 %)
[2025-05-09 21:50:08] 2025-05-09 18:07:45,631 | INFO     | sum of square deviations: 2160561440.0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,633 | INFO     | sum of deviations: -45866593326.0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,633 | INFO     | mean x: 1746808135.0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,633 | INFO     | mean y: 2529978.6125654452
[2025-05-09 21:50:08] 2025-05-09 18:07:45,633 | INFO     | -- intersect: 37085547782.81512
[2025-05-09 21:50:08] 2025-05-09 18:07:45,633 | INFO     | intersect: 37085547782.81512
[2025-05-09 21:50:08] 2025-05-09 18:07:45,633 | INFO     | chi2: 0.9603731045258102
[2025-05-09 21:50:08] 2025-05-09 18:07:45,633 | INFO     | current chi2=0.9603731045258102 (change=16.764860203076754 %)
[2025-05-09 21:50:08] 2025-05-09 18:07:45,633 | INFO     | left removable region: 30
[2025-05-09 21:50:08] 2025-05-09 18:07:45,634 | INFO     | sum of square deviations: 1523386702.5
[2025-05-09 21:50:08] 2025-05-09 18:07:45,635 | INFO     | sum of deviations: -13790612850.500002
[2025-05-09 21:50:08] 2025-05-09 18:07:45,635 | INFO     | mean x: 1746808409.5
[2025-05-09 21:50:08] 2025-05-09 18:07:45,635 | INFO     | mean y: 2523515.5588235296
[2025-05-09 21:50:08] 2025-05-09 18:07:45,635 | INFO     | -- intersect: 15815684060.993063
[2025-05-09 21:50:08] 2025-05-09 18:07:45,635 | INFO     | intersect: 15815684060.993063
[2025-05-09 21:50:08] 2025-05-09 18:07:45,636 | INFO     | chi2: 0.11908449420660434
[2025-05-09 21:50:08] 2025-05-09 18:07:45,636 | INFO     | -- intersect: 15815684060.993063
[2025-05-09 21:50:08] 2025-05-09 18:07:45,636 | INFO     | current memory leak: -9.05 B/s (using 170 data points, chi2=0.12)
[2025-05-09 21:50:08] 2025-05-09 18:07:45,636 | INFO     | ..............................
[2025-05-09 21:50:08] 2025-05-09 18:07:45,637 | INFO     | . Timing measurements:
[2025-05-09 21:50:08] 2025-05-09 18:07:45,637 | INFO     | . get job = 0 s
[2025-05-09 21:50:08] 2025-05-09 18:07:45,637 | INFO     | . initial setup = 1 s
[2025-05-09 21:50:08] 2025-05-09 18:07:45,637 | INFO     | . payload setup = 6 s
[2025-05-09 21:50:08] 2025-05-09 18:07:45,637 | INFO     | . stage-in = 0 s
[2025-05-09 21:50:08] 2025-05-09 18:07:45,637 | INFO     | . payload execution = 12528 s
[2025-05-09 21:50:08] 2025-05-09 18:07:45,637 | INFO     | . stage-out = 3 s
[2025-05-09 21:50:08] 2025-05-09 18:07:45,637 | INFO     | . log creation = 1 s
[2025-05-09 21:50:08] 2025-05-09 18:07:45,637 | INFO     | ..............................
[2025-05-09 21:50:08] 2025-05-09 18:07:45,750 | INFO     | 
[2025-05-09 21:50:08] 2025-05-09 18:07:45,751 | INFO     | job summary report
[2025-05-09 21:50:08] 2025-05-09 18:07:45,751 | INFO     | --------------------------------------------------
[2025-05-09 21:50:08] 2025-05-09 18:07:45,751 | INFO     | PanDA job id: 6638758694
[2025-05-09 21:50:08] 2025-05-09 18:07:45,751 | INFO     | task id: 44506063
[2025-05-09 21:50:08] 2025-05-09 18:07:45,751 | INFO     | errors: (none)
[2025-05-09 21:50:08] 2025-05-09 18:07:45,751 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-09 21:50:08] 2025-05-09 18:07:45,751 | INFO     | pilot state: finished 
[2025-05-09 21:50:08] 2025-05-09 18:07:45,751 | INFO     | transexitcode: 0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | exeerrorcode: 0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | exeerrordiag: 
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | exitcode: 0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | exitmsg: OK
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | cpuconsumptiontime: 53854 s
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | nevents: 400
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | neventsw: 0
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | pid: 10663
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | pgrp: 10663
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | corecount: 8
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | event service: False
[2025-05-09 21:50:08] 2025-05-09 18:07:45,752 | INFO     | sizes: {0: 2393568, 1: 2393767, 6: 2393973, 11: 2394001, 12540: 2423215, 12544: 2432156, 12546: 2432340, 12657: 2432510}
[2025-05-09 21:50:08] 2025-05-09 18:07:45,753 | INFO     | --------------------------------------------------
[2025-05-09 21:50:08] 2025-05-09 18:07:45,753 | INFO     | 
[2025-05-09 21:50:08] 2025-05-09 18:07:45,753 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-05-09 21:50:08] 2025-05-09 18:07:45,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,788 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-09 21:50:08] 2025-05-09 18:07:45,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-09 21:50:08] 2025-05-09 18:07:45,790 | INFO     | job 6638758694 has completed (purged errors)
[2025-05-09 21:50:08] 2025-05-09 18:07:45,790 | INFO     | overall cleanup function is called
[2025-05-09 21:50:08] 2025-05-09 18:07:45,870 | INFO     | PID=4237 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-09 21:50:08] 2025-05-09 18:07:45,871 | INFO     | .. there are 2 such processes running
[2025-05-09 21:50:08] 2025-05-09 18:07:46,801 | INFO     | --- collectZombieJob: --- 10, [10663]
[2025-05-09 21:50:08] 2025-05-09 18:07:46,801 | INFO     | zombie collector waiting for pid 10663
[2025-05-09 21:50:08] 2025-05-09 18:07:46,802 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-09 21:50:08] 2025-05-09 18:07:46,802 | INFO     | collected zombie processes
[2025-05-09 21:50:08] 2025-05-09 18:07:46,802 | INFO     | will attempt to kill all subprocesses of pid=10663
[2025-05-09 21:50:08] 2025-05-09 18:07:46,882 | INFO     | process IDs to be killed: [10663] (in reverse order)
[2025-05-09 21:50:08] 2025-05-09 18:07:47,748 | WARNING  | found no corresponding commands to process id(s)
[2025-05-09 21:50:08] 2025-05-09 18:07:47,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-09 21:50:08] 2025-05-09 18:07:47,751 | INFO     | did not find any defunct processes belonging to 10663
[2025-05-09 21:50:08] 2025-05-09 18:07:47,753 | INFO     | did not find any defunct processes belonging to 10663
[2025-05-09 21:50:08] 2025-05-09 18:07:47,754 | INFO     | ready for new job
[2025-05-09 21:50:08] 2025-05-09 18:07:47,754 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-09 21:50:08] 2025-05-09 18:07:47,755 | INFO     | **************************************
[2025-05-09 21:50:08] 2025-05-09 18:07:47,756 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-09 21:50:08] 2025-05-09 18:07:47,756 | INFO     | **************************************
[2025-05-09 21:50:08] 2025-05-09 18:07:47,756 | INFO     | 
[2025-05-09 21:50:08] 2025-05-09 18:07:47,756 | INFO     | pilot is running in a VM
[2025-05-09 21:50:08] 2025-05-09 18:07:47,756 | INFO     | architecture information:
[2025-05-09 21:50:08] 2025-05-09 18:07:47,757 | INFO     | executing command: cat /etc/os-release
[2025-05-09 21:50:08] 2025-05-09 18:07:47,806 | INFO     | cat /etc/os-release:
[2025-05-09 21:50:08] NAME="CentOS Linux"
[2025-05-09 21:50:08] VERSION="7 (Core)"
[2025-05-09 21:50:08] ID="centos"
[2025-05-09 21:50:08] ID_LIKE="rhel fedora"
[2025-05-09 21:50:08] VERSION_ID="7"
[2025-05-09 21:50:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-09 21:50:08] ANSI_COLOR="0;31"
[2025-05-09 21:50:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-09 21:50:08] HOME_URL="https://www.centos.org/"
[2025-05-09 21:50:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-09 21:50:08] 
[2025-05-09 21:50:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-09 21:50:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-09 21:50:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-09 21:50:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-09 21:50:08] 
[2025-05-09 21:50:08] 2025-05-09 18:07:47,806 | INFO     | **************************************
[2025-05-09 21:50:08] 2025-05-09 18:07:48,309 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-05-09 21:50:08] 2025-05-09 18:07:48,616 | INFO     | sufficient remaining disk space (497311285248 B)
[2025-05-09 21:50:08] 2025-05-09 18:07:48,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-09 21:50:08] 2025-05-09 18:07:48,616 | INFO     | current server update state: UPDATING_FINAL
[2025-05-09 21:50:08] 2025-05-09 18:07:48,616 | INFO     | update_server=False
[2025-05-09 21:50:08] 2025-05-09 18:07:48,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-09 21:50:08] 2025-05-09 18:07:48,617 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-09 21:50:08] 2025-05-09 18:07:48,617 | INFO     | found 0 job(s) in 20 queues
[2025-05-09 21:50:08] 2025-05-09 18:07:48,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-09 21:50:08] 2025-05-09 18:07:48,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-09 21:50:08] 2025-05-09 18:07:48,625 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-09 21:50:08] 2025-05-09 18:07:48,626 | INFO     | aborting loop
[2025-05-09 21:50:08] 2025-05-09 18:07:48,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-09 21:50:08] 2025-05-09 18:07:48,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-09 21:50:08] 2025-05-09 18:07:49,156 | INFO     | all job control threads have been joined
[2025-05-09 21:50:08] 2025-05-09 18:07:49,253 | INFO     | all payload control threads have been joined
[2025-05-09 21:50:08] 2025-05-09 18:07:49,536 | INFO     | all data control threads have been joined
[2025-05-09 21:50:08] 2025-05-09 18:07:49,622 | INFO     | [job] retrieve thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:49,631 | INFO     | [job] job monitor thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:49,932 | INFO     | [data] copytool_in thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:50,162 | INFO     | [job] control thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:50,210 | INFO     | [payload] execute_payloads thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:50,259 | INFO     | [payload] control thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:50,341 | INFO     | [payload] failed_post thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:50,396 | INFO     | [job] create_data_payload thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:50,477 | INFO     | [job] validate thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:50,541 | INFO     | [data] control thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:50,682 | INFO     | [data] copytool_out thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:50,705 | INFO     | [payload] validate_post thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:50,777 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-09 21:50:08] 2025-05-09 18:07:51,105 | INFO     | [payload] validate_pre thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:51,783 | INFO     | [job] queue monitor thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:52,867 | INFO     | [data] queue_monitor thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:07:58,890 | INFO     | job.realtimelogging is not enabled
[2025-05-09 21:50:08] 2025-05-09 18:07:59,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-09 21:50:08] 2025-05-09 18:08:01,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651172362048)>', '<ExcThread(monitor, started 139650442188544)>']
[2025-05-09 21:50:08] 2025-05-09 18:08:02,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-09 21:50:08] 2025-05-09 18:08:02,700 | INFO     | [monitor] control thread has ended
[2025-05-09 21:50:08] 2025-05-09 18:08:06,952 | INFO     | all workflow threads have been joined
[2025-05-09 21:50:08] 2025-05-09 18:08:06,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-09 21:50:08] 2025-05-09 18:08:06,953 | INFO     | traces error code: 0
[2025-05-09 21:50:08] 2025-05-09 18:08:06,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-09 21:50:08] 2025-05-09 18:08:07,108 [wrapper] ==== pilot stdout END ====
[2025-05-09 21:50:08] 2025-05-09 18:08:07,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-09 21:50:08] 2025-05-09 18:08:07,288 [wrapper] pilotpid: 4237
[2025-05-09 21:50:08] 2025-05-09 18:08:07,366 [wrapper] Pilot exit status: 0
[2025-05-09 21:50:08] 2025-05-09 18:08:07,831 [wrapper] pandaids: 6638758694
[2025-05-09 21:50:08] 2025-05-09 18:08:08,682 [wrapper] cleanup supervisor_pilot  5855 4238
[2025-05-09 21:50:08] 2025-05-09 18:08:08,755 [wrapper] Test setup, not cleaning
[2025-05-09 21:50:08] 2025-05-09 18:08:08,842 [wrapper] apfmon messages muted
[2025-05-09 21:50:08] 2025-05-09 18:08:08,963 [wrapper] ==== wrapper stdout END ====
[2025-05-09 21:50:08] 2025-05-09 18:08:09,102 [wrapper] ==== wrapper stderr END ====
[2025-05-09 21:50:08]  *** Error codes and diagnostics ***
[2025-05-09 21:50:08]     "exeErrorCode": 0,
[2025-05-09 21:50:08]     "exeErrorDiag": "",
[2025-05-09 21:50:08]     "pilotErrorCode": 0,
[2025-05-09 21:50:08]     "pilotErrorDiag": "",
[2025-05-09 21:50:08]  *** Listing of results directory ***
[2025-05-09 21:50:08] total 420484
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc    495897 May  8 17:40 pilot3.tar.gz
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc      5111 May  8 17:58 queuedata.json
[2025-05-09 21:50:08] -rwx------. 1 boinc boinc     37140 May  8 17:59 runpilot2-wrapper.sh
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc       100 May  9 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-09 21:50:08] -rwxr-xr-x. 1 boinc boinc      7986 May  9 16:36 run_atlas
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc       105 May  9 16:36 job.xml
[2025-05-09 21:50:08] -rw-r--r--. 2 boinc boinc    508882 May  9 16:36 input.tar.gz
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc      6370 May  9 16:36 init_data.xml
[2025-05-09 21:50:08] -rw-r--r--. 2 boinc boinc 227271523 May  9 16:36 EVNT.44506061._002181.pool.root.1
[2025-05-09 21:50:08] -rw-r--r--. 2 boinc boinc     17569 May  9 16:36 start_atlas.sh
[2025-05-09 21:50:08] drwxrwx--x. 2 boinc boinc        68 May  9 16:36 shared
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc         0 May  9 16:36 boinc_lockfile
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc      2558 May  9 16:36 pandaJob.out
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc       424 May  9 16:36 setup.sh.local
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc    996344 May  9 16:36 agis_schedconf.cvmfs.json
[2025-05-09 21:50:08] drwx------. 4 boinc boinc      4096 May  9 16:36 pilot3
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc 196524203 May  9 20:04 HITS.44506063._056493.pool.root.1
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc       530 May  9 20:04 boinc_task_state.xml
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc      1020 May  9 20:05 memory_monitor_summary.json
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc   1596741 May  9 20:05 agis_ddmendpoints.agis.ALL.json
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc    362140 May  9 20:05 log.44506063._056493.job.log.tgz.1
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc        95 May  9 20:07 pilot_heartbeat.json
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc      7688 May  9 20:07 heartbeat.json
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc      4611 May  9 20:08 pilotlog.txt
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc   1109512 May  9 20:08 log.44506063._056493.job.log.1
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc       357 May  9 20:08 output.list
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc       620 May  9 20:08 runtime_log
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc   1495040 May  9 20:08 result.tar.gz
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc     11013 May  9 20:08 runtime_log.err
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc       657 May  9 20:08 cn7KDmhpIX7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm6h9LDmMIUdrn.diag
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc      8192 May  9 21:50 boinc_mmap_file
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc        28 May  9 21:50 wrapper_checkpoint.txt
[2025-05-09 21:50:08] -rw-r--r--. 1 boinc boinc     20574 May  9 21:50 stderr.txt
[2025-05-09 21:50:08] HITS file was successfully produced:
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc 196524203 May  9 20:04 shared/HITS.pool.root.1
[2025-05-09 21:50:08]  *** Contents of shared directory: ***
[2025-05-09 21:50:08] total 415848
[2025-05-09 21:50:08] -rw-r--r--. 2 boinc boinc    508882 May  9 16:36 input.tar.gz
[2025-05-09 21:50:08] -rw-r--r--. 2 boinc boinc 227271523 May  9 16:36 ATLAS.root_0
[2025-05-09 21:50:08] -rw-r--r--. 2 boinc boinc     17569 May  9 16:36 start_atlas.sh
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc 196524203 May  9 20:04 HITS.pool.root.1
[2025-05-09 21:50:08] -rw-------. 1 boinc boinc   1495040 May  9 20:08 result.tar.gz
21:50:09 (32660): run_atlas exited; CPU time 53949.539821
21:50:09 (32660): called boinc_finish(0)

</stderr_txt>
]]>

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